

Supporting information
![]() | Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536814007855/vn2082sup1.cif |
![]() | Structure factor file (CIF format) https://doi.org/10.1107/S1600536814007855/vn2082Isup2.hkl |
CCDC reference: 996158
Key indicators
- Single-crystal X-ray study
- T = 296 K
- Mean
(C-C) = 0.005 Å
- R factor = 0.026
- wR factor = 0.067
- Data-to-parameter ratio = 16.0
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT241_ALERT_2_C High Ueq as Compared to Neighbors for ..... C4 Check PLAT242_ALERT_2_C Low Ueq as Compared to Neighbors for ..... N1 Check PLAT242_ALERT_2_C Low Ueq as Compared to Neighbors for ..... N2 Check PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.600 11 Why ?
Alert level G PLAT005_ALERT_5_G No _iucr_refine_instructions_details in the CIF Please Do ! PLAT242_ALERT_2_G Low Ueq as Compared to Neighbors for ..... C13 Check PLAT910_ALERT_3_G Missing # of FCF Reflections Below Th(Min) ..... 1 Why ?
0 ALERT level A = Most likely a serious problem - resolve or explain 0 ALERT level B = A potentially serious problem, consider carefully 4 ALERT level C = Check. Ensure it is not caused by an omission or oversight 3 ALERT level G = General information/check it is not something unexpected 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 4 ALERT type 2 Indicator that the structure model may be wrong or deficient 2 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 1 ALERT type 5 Informative message, check
Under nitrogen, [(tmeda)Pd(p-FPh)(I)] (445 mg, 1 mmol, 1 equiv) and CsF (3 equiv) were suspended in THF (0.145 M) in a 25 ml Schlenk flask. This mixture was stirred strongly for 10 min and then TMSCF3 (2 equiv) was added. The reaction was stirred vigorously for 1.5 h at 30 °C. A colorless solid [(tmeda)Pd(p-FPh)(CF3)] was obtained. 50 mg of [(tmeda)Pd(p-FPh)(CF3)] was put into a 10 ml transparent bottle, and CH2Cl2 (2 ml) was added to dissolve it. The bottleneck was sealed by a plastic wrap, and lay aside the transparent bottle into a wide-mouth bottle containing diethyl ether (15 ml). Colorless block single crystals of [(tmeda)Pd(p-FPh)(CF3)] were obtained after 3 days.
The H atoms bonded to C atoms were introduced at calculated positions and refined using a riding model, with Uiso(H) = 1.2Ueq(C) and Uiso(H) = 1.5Ueq(C), and C–H distances of 0.93–0.96 Å.
Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
[Pd(CF3)(C6H4F)(C6H16N2)] | F(000) = 776 |
Mr = 386.71 | Dx = 1.653 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 6327 reflections |
a = 16.6651 (19) Å | θ = 2.5–28.3° |
b = 8.3464 (9) Å | µ = 1.23 mm−1 |
c = 11.4710 (13) Å | T = 296 K |
β = 103.063 (2)° | Block, colourless |
V = 1554.3 (3) Å3 | 0.29 × 0.27 × 0.19 mm |
Z = 4 |
Bruker APEXII CCD diffractometer | 2875 independent reflections |
Radiation source: fine-focus sealed tube | 2628 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.032 |
ϕ and ω scans | θmax = 25.5°, θmin = 2.5° |
Absorption correction: multi-scan (SADABS; Bruker, 2007) | h = −20→19 |
Tmin = 0.717, Tmax = 0.800 | k = −7→10 |
8555 measured reflections | l = −13→13 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.026 | H-atom parameters constrained |
wR(F2) = 0.067 | w = 1/[σ2(Fo2) + (0.0257P)2 + 1.3072P] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max < 0.001 |
2875 reflections | Δρmax = 0.56 e Å−3 |
180 parameters | Δρmin = −0.42 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0130 (7) |
[Pd(CF3)(C6H4F)(C6H16N2)] | V = 1554.3 (3) Å3 |
Mr = 386.71 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 16.6651 (19) Å | µ = 1.23 mm−1 |
b = 8.3464 (9) Å | T = 296 K |
c = 11.4710 (13) Å | 0.29 × 0.27 × 0.19 mm |
β = 103.063 (2)° |
Bruker APEXII CCD diffractometer | 2875 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2007) | 2628 reflections with I > 2σ(I) |
Tmin = 0.717, Tmax = 0.800 | Rint = 0.032 |
8555 measured reflections |
R[F2 > 2σ(F2)] = 0.026 | 0 restraints |
wR(F2) = 0.067 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.56 e Å−3 |
2875 reflections | Δρmin = −0.42 e Å−3 |
180 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.1947 (3) | 0.3541 (4) | −0.1824 (3) | 0.0676 (10) | |
H1A | 0.1625 | 0.2614 | −0.2124 | 0.101* | |
H1B | 0.2458 | 0.3510 | −0.2077 | 0.101* | |
H1C | 0.1649 | 0.4492 | −0.2130 | 0.101* | |
C2 | 0.1308 (2) | 0.3660 (4) | −0.0178 (4) | 0.0697 (10) | |
H2A | 0.1389 | 0.3639 | 0.0677 | 0.104* | |
H2B | 0.0969 | 0.2770 | −0.0517 | 0.104* | |
H2C | 0.1041 | 0.4643 | −0.0482 | 0.104* | |
C3 | 0.2600 (3) | 0.4968 (4) | −0.0004 (4) | 0.0770 (12) | |
H3A | 0.2441 | 0.5870 | −0.0539 | 0.092* | |
H3B | 0.2472 | 0.5237 | 0.0757 | 0.092* | |
C4 | 0.3477 (2) | 0.4711 (5) | 0.0176 (5) | 0.0831 (13) | |
H4A | 0.3763 | 0.5657 | 0.0548 | 0.100* | |
H4B | 0.3611 | 0.4580 | −0.0599 | 0.100* | |
C5 | 0.3906 (3) | 0.3625 (5) | 0.2209 (4) | 0.0832 (14) | |
H5A | 0.4169 | 0.2726 | 0.2661 | 0.125* | |
H5B | 0.3382 | 0.3815 | 0.2399 | 0.125* | |
H5C | 0.4247 | 0.4558 | 0.2406 | 0.125* | |
C6 | 0.4590 (2) | 0.2862 (5) | 0.0683 (4) | 0.0691 (10) | |
H6A | 0.4948 | 0.3776 | 0.0825 | 0.104* | |
H6B | 0.4514 | 0.2533 | −0.0137 | 0.104* | |
H6C | 0.4831 | 0.2000 | 0.1199 | 0.104* | |
C7 | 0.12779 (18) | −0.0466 (4) | −0.0076 (3) | 0.0492 (7) | |
H7 | 0.1232 | −0.0043 | 0.0656 | 0.059* | |
C8 | 0.0662 (2) | −0.1472 (4) | −0.0689 (4) | 0.0658 (10) | |
H8 | 0.0208 | −0.1718 | −0.0378 | 0.079* | |
C9 | 0.0738 (2) | −0.2090 (4) | −0.1757 (4) | 0.0658 (10) | |
C10 | 0.1397 (3) | −0.1777 (4) | −0.2232 (3) | 0.0675 (11) | |
H10 | 0.1438 | −0.2216 | −0.2961 | 0.081* | |
C11 | 0.2004 (2) | −0.0786 (4) | −0.1598 (3) | 0.0557 (8) | |
H11 | 0.2465 | −0.0585 | −0.1904 | 0.067* | |
C12 | 0.19541 (17) | −0.0076 (3) | −0.0519 (2) | 0.0389 (6) | |
C13 | 0.34552 (19) | −0.0443 (4) | 0.1069 (3) | 0.056 | |
F1 | 0.30400 (16) | −0.1597 (3) | 0.1466 (3) | 0.0905 (8) | |
F2 | 0.40331 (16) | −0.0049 (3) | 0.2069 (3) | 0.1081 (10) | |
F3 | 0.3877 (2) | −0.1208 (3) | 0.0386 (3) | 0.1207 (12) | |
F4 | 0.01374 (16) | −0.3096 (3) | −0.2362 (3) | 0.1088 (10) | |
N1 | 0.21161 (16) | 0.3549 (3) | −0.0509 (2) | 0.0455 (6) | |
N2 | 0.37856 (16) | 0.3287 (3) | 0.0931 (2) | 0.0483 (6) | |
Pd1 | 0.282550 (12) | 0.14760 (2) | 0.027333 (17) | 0.03517 (11) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.092 (3) | 0.062 (2) | 0.0461 (18) | 0.0159 (19) | 0.0097 (18) | 0.0128 (15) |
C2 | 0.070 (2) | 0.062 (2) | 0.082 (3) | 0.0226 (18) | 0.027 (2) | 0.0115 (19) |
C3 | 0.080 (3) | 0.0372 (19) | 0.101 (3) | −0.0030 (18) | −0.006 (2) | 0.0041 (19) |
C4 | 0.071 (3) | 0.045 (2) | 0.132 (4) | −0.0135 (18) | 0.019 (2) | 0.009 (2) |
C5 | 0.076 (3) | 0.109 (4) | 0.067 (2) | −0.034 (2) | 0.022 (2) | −0.039 (2) |
C6 | 0.0481 (19) | 0.087 (3) | 0.075 (2) | −0.0154 (19) | 0.0203 (17) | −0.011 (2) |
C7 | 0.0449 (16) | 0.0494 (18) | 0.0536 (17) | −0.0037 (14) | 0.0119 (13) | −0.0032 (14) |
C8 | 0.0386 (17) | 0.060 (2) | 0.097 (3) | −0.0064 (15) | 0.0099 (18) | 0.0007 (19) |
C9 | 0.056 (2) | 0.0447 (19) | 0.079 (2) | −0.0073 (16) | −0.0217 (19) | −0.0024 (18) |
C10 | 0.099 (3) | 0.0480 (19) | 0.0467 (18) | −0.0103 (19) | −0.0019 (19) | −0.0066 (15) |
C11 | 0.074 (2) | 0.0457 (18) | 0.0504 (17) | −0.0156 (16) | 0.0212 (16) | −0.0048 (15) |
C12 | 0.0413 (14) | 0.0342 (14) | 0.0388 (13) | −0.0015 (11) | 0.0038 (11) | 0.0021 (11) |
C13 | 0.044 | 0.049 | 0.072 | −0.003 | 0.008 | −0.006 |
F1 | 0.0801 (16) | 0.0650 (15) | 0.118 (2) | 0.0029 (11) | 0.0049 (14) | 0.0432 (13) |
F2 | 0.0912 (18) | 0.0810 (17) | 0.119 (2) | 0.0006 (14) | −0.0460 (16) | 0.0218 (15) |
F3 | 0.129 (2) | 0.098 (2) | 0.154 (3) | 0.0678 (19) | 0.071 (2) | 0.0274 (19) |
F4 | 0.0831 (17) | 0.0773 (16) | 0.135 (2) | −0.0264 (14) | −0.0406 (16) | −0.0194 (16) |
N1 | 0.0537 (15) | 0.0382 (14) | 0.0420 (13) | 0.0000 (10) | 0.0050 (11) | 0.0040 (10) |
N2 | 0.0434 (13) | 0.0466 (14) | 0.0544 (15) | −0.0089 (11) | 0.0100 (11) | −0.0056 (12) |
Pd1 | 0.03454 (14) | 0.03201 (14) | 0.03823 (14) | −0.00229 (8) | 0.00669 (9) | −0.00038 (8) |
C1—N1 | 1.471 (4) | C6—H6B | 0.9600 |
C1—H1A | 0.9600 | C6—H6C | 0.9600 |
C1—H1B | 0.9600 | C7—C12 | 1.375 (4) |
C1—H1C | 0.9600 | C7—C8 | 1.388 (5) |
C2—N1 | 1.483 (5) | C7—H7 | 0.9300 |
C2—H2A | 0.9600 | C8—C9 | 1.361 (6) |
C2—H2B | 0.9600 | C8—H8 | 0.9300 |
C2—H2C | 0.9600 | C9—C10 | 1.357 (6) |
C3—C4 | 1.446 (6) | C9—F4 | 1.369 (4) |
C3—N1 | 1.475 (4) | C10—C11 | 1.379 (5) |
C3—H3A | 0.9700 | C10—H10 | 0.9300 |
C3—H3B | 0.9700 | C11—C12 | 1.392 (4) |
C4—N2 | 1.492 (5) | C11—H11 | 0.9300 |
C4—H4A | 0.9700 | Pd1—C12 | 2.004 (3) |
C4—H4B | 0.9700 | C13—F1 | 1.325 (4) |
C5—N2 | 1.462 (5) | C13—F3 | 1.329 (4) |
C5—H5A | 0.9600 | C13—F2 | 1.361 (4) |
C5—H5B | 0.9600 | Pd1—C13 | 2.017 (3) |
C5—H5C | 0.9600 | Pd1—N1 | 2.172 (2) |
C6—N2 | 1.475 (4) | Pd1—N2 | 2.206 (2) |
C6—H6A | 0.9600 | ||
N1—C1—H1A | 109.5 | C9—C8—C7 | 118.5 (4) |
N1—C1—H1B | 109.5 | C9—C8—H8 | 120.8 |
H1A—C1—H1B | 109.5 | C7—C8—H8 | 120.8 |
N1—C1—H1C | 109.5 | C10—C9—C8 | 122.4 (3) |
H1A—C1—H1C | 109.5 | C10—C9—F4 | 118.7 (4) |
H1B—C1—H1C | 109.5 | C8—C9—F4 | 118.9 (4) |
N1—C2—H2A | 109.5 | C9—C10—C11 | 117.9 (3) |
N1—C2—H2B | 109.5 | C9—C10—H10 | 121.1 |
H2A—C2—H2B | 109.5 | C11—C10—H10 | 121.1 |
N1—C2—H2C | 109.5 | C10—C11—C12 | 122.7 (3) |
H2A—C2—H2C | 109.5 | C10—C11—H11 | 118.7 |
H2B—C2—H2C | 109.5 | C12—C11—H11 | 118.7 |
C4—C3—N1 | 112.4 (3) | C7—C12—C11 | 116.5 (3) |
C4—C3—H3A | 109.1 | C7—C12—Pd1 | 123.8 (2) |
N1—C3—H3A | 109.1 | C11—C12—Pd1 | 119.7 (2) |
C4—C3—H3B | 109.1 | F1—C13—F3 | 103.9 (3) |
N1—C3—H3B | 109.1 | F1—C13—F2 | 102.2 (3) |
H3A—C3—H3B | 107.8 | F3—C13—F2 | 104.2 (3) |
C3—C4—N2 | 113.9 (3) | F1—C13—Pd1 | 118.3 (2) |
C3—C4—H4A | 108.8 | F3—C13—Pd1 | 113.9 (3) |
N2—C4—H4A | 108.8 | F2—C13—Pd1 | 112.8 (2) |
C3—C4—H4B | 108.8 | C1—N1—C3 | 111.6 (3) |
N2—C4—H4B | 108.8 | C1—N1—C2 | 106.8 (3) |
H4A—C4—H4B | 107.7 | C3—N1—C2 | 107.2 (3) |
N2—C5—H5A | 109.5 | C1—N1—Pd1 | 112.3 (2) |
N2—C5—H5B | 109.5 | C3—N1—Pd1 | 106.2 (2) |
H5A—C5—H5B | 109.5 | C2—N1—Pd1 | 112.7 (2) |
N2—C5—H5C | 109.5 | C5—N2—C6 | 108.4 (3) |
H5A—C5—H5C | 109.5 | C5—N2—C4 | 112.3 (3) |
H5B—C5—H5C | 109.5 | C6—N2—C4 | 106.8 (3) |
N2—C6—H6A | 109.5 | C5—N2—Pd1 | 113.6 (2) |
N2—C6—H6B | 109.5 | C6—N2—Pd1 | 112.9 (2) |
H6A—C6—H6B | 109.5 | C4—N2—Pd1 | 102.7 (2) |
N2—C6—H6C | 109.5 | C12—Pd1—C13 | 86.65 (12) |
H6A—C6—H6C | 109.5 | C12—Pd1—N1 | 93.25 (10) |
H6B—C6—H6C | 109.5 | C13—Pd1—N1 | 177.08 (12) |
C12—C7—C8 | 122.0 (3) | C12—Pd1—N2 | 173.23 (10) |
C12—C7—H7 | 119.0 | C13—Pd1—N2 | 97.25 (12) |
C8—C7—H7 | 119.0 | N1—Pd1—N2 | 83.14 (10) |
N1—C3—C4—N2 | −55.4 (5) | C11—C12—Pd1—N1 | 95.3 (2) |
C12—C7—C8—C9 | 0.3 (5) | F1—C13—Pd1—C12 | −40.6 (3) |
C7—C8—C9—C10 | 1.0 (6) | F3—C13—Pd1—C12 | 81.9 (3) |
C7—C8—C9—F4 | 179.4 (3) | F2—C13—Pd1—C12 | −159.6 (3) |
C8—C9—C10—C11 | −0.3 (6) | F1—C13—Pd1—N2 | 145.0 (3) |
F4—C9—C10—C11 | −178.7 (3) | F3—C13—Pd1—N2 | −92.6 (3) |
C9—C10—C11—C12 | −1.6 (5) | F2—C13—Pd1—N2 | 25.9 (3) |
C8—C7—C12—C11 | −2.1 (5) | C1—N1—Pd1—C12 | −61.5 (2) |
C8—C7—C12—Pd1 | 176.0 (2) | C3—N1—Pd1—C12 | 176.3 (2) |
C10—C11—C12—C7 | 2.8 (5) | C2—N1—Pd1—C12 | 59.1 (2) |
C10—C11—C12—Pd1 | −175.4 (3) | C1—N1—Pd1—N2 | 112.8 (2) |
C4—C3—N1—C1 | −87.2 (4) | C3—N1—Pd1—N2 | −9.5 (2) |
C4—C3—N1—C2 | 156.3 (4) | C2—N1—Pd1—N2 | −126.6 (2) |
C4—C3—N1—Pd1 | 35.5 (4) | C5—N2—Pd1—C13 | −71.4 (3) |
C3—C4—N2—C5 | −80.8 (4) | C6—N2—Pd1—C13 | 52.6 (3) |
C3—C4—N2—C6 | 160.5 (4) | C4—N2—Pd1—C13 | 167.1 (3) |
C3—C4—N2—Pd1 | 41.5 (4) | C5—N2—Pd1—N1 | 105.7 (3) |
C7—C12—Pd1—C13 | 94.4 (3) | C6—N2—Pd1—N1 | −130.4 (2) |
C11—C12—Pd1—C13 | −87.6 (3) | C4—N2—Pd1—N1 | −15.8 (2) |
C7—C12—Pd1—N1 | −82.7 (3) |
Trifluoromethyl palladium aryl complexes have attracted much attention due to the demand for metal-mediated C—F bond breaking and C—C bond formation reactions involving highly fluorinated substrates (Maleckis & Sanford, 2011; Ball et al., 2010; Ye et al., 2010; Racowski et al., 2011; Ball et al.,2011).
Single-crystal X-ray diffraction of the title compound reveals that PdII [(tmeda)Pd(p-FPh)(CF3)] is four-coordinate. As shown in Fig. 1, the asymmetric unit comprises one PdII cation, a tmeda ligand (N1 and N2), a p-FPh group (C12) and a CF3 group (C13). For primary bond lengths, see Table 1. The PdII—CF3 bond length [2.015 (4) Å] (Table 1) is comparable with those in similar PdII complexes (Grushin & Marshall, 2006). The bidentate Xantphos ligand used in the latte study is s a larger spatial stucture ligand, and therefore [(Xantphos)Pd(Ph)(CF3)] has an obviously greater PdII—CF3 bond length with [2.069 (3) Å] (Grushin & Marshall, 2006). Fig. 2 gives the molecular packing of the title compound, viewed along the a axis.