

Bis(μ-4-formylbenzoato-κ2O:O′)bis[(4-formylbenzoato-κ2O,O′)bis(isonicotinamide-κN1)copper(II)]


Supporting information
![]() | Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536813010908/wm2735sup1.cif |
![]() | Structure factor file (CIF format) https://doi.org/10.1107/S1600536813010908/wm2735Isup2.hkl |
CCDC reference: 954211
Key indicators
- Single-crystal X-ray study
- T = 100 K
- Mean
(C-C) = 0.008 Å
- Disorder in main residue
- R factor = 0.078
- wR factor = 0.204
- Data-to-parameter ratio = 15.9
checkCIF/PLATON results
No syntax errors found
Alert level B RINTA01_ALERT_3_B The value of Rint is greater than 0.18 Rint given 0.189 PLAT020_ALERT_3_B The value of Rint is greater than 0.12 ......... 0.189
Alert level C PLAT029_ALERT_3_C _diffrn_measured_fraction_theta_full Low ....... 0.968 PLAT213_ALERT_2_C Atom O8 has ADP max/min Ratio ..... 3.8 prola PLAT213_ALERT_2_C Atom C17 has ADP max/min Ratio ..... 3.4 oblat PLAT213_ALERT_2_C Atom C24 has ADP max/min Ratio ..... 3.4 oblat PLAT220_ALERT_2_C Large Non-Solvent O Ueq(max)/Ueq(min) ... 3.4 Ratio PLAT245_ALERT_2_C U(iso) H26 Smaller than U(eq) C26 by ... 0.023 AngSq PLAT309_ALERT_2_C Single Bonded Oxygen (C-O .GT. 1.3 Ang) ........ O5B PLAT341_ALERT_3_C Low Bond Precision on C-C Bonds ............... 0.0078 Ang PLAT906_ALERT_3_C Large K value in the Analysis of Variance ...... 4.307 PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.600 21 PLAT973_ALERT_2_C Large Calcd. Positive Residual Density on Cu1 1.18 eA-3 PLAT976_ALERT_2_C Negative Residual Density at 0.70A from O4 . -0.61 eA-3
Alert level G PLAT002_ALERT_2_G Number of Distance or Angle Restraints on AtSite 8 PLAT003_ALERT_2_G Number of Uiso or Uij Restrained Atom Sites .... 42 PLAT005_ALERT_5_G No _iucr_refine_instructions_details in the CIF ? PLAT007_ALERT_5_G Note: Number of Unrefined D-H Atoms ............ 4 PLAT164_ALERT_4_G Nr. of Refined C-H H-Atoms in Heavy-Atom Struct. 3 PLAT301_ALERT_3_G Note: Main Residue Disorder ................... 2 Perc. PLAT794_ALERT_5_G Note: Tentative Bond Valency for Cu1 (II) 2.09 PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 119 PLAT912_ALERT_4_G Missing # of FCF Reflections Above STh/L= 0.600 183
0 ALERT level A = Most likely a serious problem - resolve or explain 2 ALERT level B = A potentially serious problem, consider carefully 12 ALERT level C = Check. Ensure it is not caused by an omission or oversight 9 ALERT level G = General information/check it is not something unexpected 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 10 ALERT type 2 Indicator that the structure model may be wrong or deficient 8 ALERT type 3 Indicator that the structure quality may be low 2 ALERT type 4 Improvement, methodology, query or suggestion 3 ALERT type 5 Informative message, check
The title compound was prepared by the reaction of CuSO4.5H2O (1.25 g, 5 mmol) in H2O (50 ml) and INA (1.22 g, 10 mmol) in H2O (100 ml) with sodium 4-formylbenzoate (1.72 g, 10 mmol) in H2O (100 ml). The mixture was filtered and set aside to crystallize at ambient temperature for several days, giving blue single crystals.
The crystal quality of the obtained crystals was poor. Recrystallization studies in order to get a high quality crystal were not successful. Atom H26 (of one formyl group) was located in a difference Fourier map and refined freely. The remaining H atoms were positioned geometrically with N—H = 0.86%A for NH2 and C—H = 0.93 Å for aromatic H atoms, and constrained to ride on their parent atoms, with Uiso(H) = 1.2 × Ueq(C,N). The other formyl group was found to be disordered over two sets of sites with an occupancy ratio of 0.65:0.35 for O5A, H25A and O5B, H25B. The highest residual electron density was found 0.71 Å from H26 and the deepest hole 0.84 Å from Cu1.
As a part of our ongoing investigation on transition metal complexes of nicotinamide (NA), one form of niacin (Krishnamachari, 1974), and/or the nicotinic acid derivative N,N-diethylnicotinamide (DENA), an important respiratory stimulant (Bigoli et al., 1972), the title compound , [Cu2(C8H5O3)4(C6H6N2O)4], was synthesized and its crystal structure is reported herein.
The asymmetric unit of the centrosymmetric dinuclear title compound contains one half of the complex molecule. The structures of some DENA and/or NA complexes with ZnII, viz. [Zn2(C11H14NO2)4(C10H14N2O)2] (Hökelek et al., 2009a), [Zn2(C8H8NO2)4(C10H14N2O)2].2H2O (Hökelek et al., 2009b) and [Zn2(C7H4FO2)4(C6H6N2O)2].C7H5FO2 (Hökelek et al., 2009c) have also been determined.
In the title dinuclear compound the Cu2+ cations are bridged by two carboxylate groups of two 4-formylbenzoate (FOB) anions. The two bridging FOB anions, one chelating FOB anion and two isonicotinamide (INA) ligands coordinate to each Cu2+ cation in a distorted octahedral geometry. Each CuII atom is surrounded by three FOB anions and two INA ligands. The INA ligands are coordinated to the CuII ion through pyridine N atoms only. Two FOB anions act as bridging ligands, while the other FOB anion is coordinated to the CuII ion bidentately. The Cu1···Cu1a distance is 4.1554 (8) Å. The four O atoms around the Cu1 atom form a distorted square-planar arrangement with an average Cu1—O bond length of 2.23 Å (Table 1). The distorted octahedral coordination is completed by the pyridine atoms, N1 and N2 of the INA ligands at distances of 2.033 (4) and 2.013 (4) Å, respectively (Table 1, Fig. 1). The N1—Cu1···Cu1a and N2—Cu1···Cu1a angles (a = x, - y, - z) are 97.62 (12) and 77.27 (12) °, respectively. The dihedral angles between the planar carboxylate groups (O1/O2/C1), (O3/O4/C8) and the adjacent benzene rings A (C2—C7), B (C9—C14) are 11.3 (6)° and 2.1 (6)°, respectively, while that between rings A and B is A/B = 25.1 (3)°. The pyridine rings C (N1/C15—C19) and D (N2/C20—C24) are oriented at a dihedral angle of 12.6 (3)°. The O1—Cu1—O2 angle involving the chelating FOB anion is 53.50 (14)°.
The corresponding O—Cu—O angles are 57.75 (2)° in [Cu(C7H4FO2)2(C7H5FO2)(C6H6N2O)2] (Necefoğlu et al., 2011), 58.3 (3)° in [Cu(C7H5O2)2(C10H14N2O)2] (Hökelek et al., 1996) and 55.2 (1)° in [Cu(Asp)2(py)2] (where Asp is acetylsalicylate and py is pyridine) (Greenaway et al., 1984).
In the crystal structure, N—H···O and C–H···O hydrogen bonds (Table 2) link the molecules into a three-dimensional network, in which they may be effective in the stabilization of the structure. The shortest π–π contact between the pyridine rings, Cg3—Cg4i [symmetry code: (i) 1 - x, 1 - y, - z, where Cg3 and Cg4 are the centroids of the rings C (N1/C15—C19) and D (N2/C20—C24), respectively] may further stabilize the structure, with a centroid-centroid distance of 3.821 (3) Å.
For general background, see: Bigoli et al. (1972); Krishnamachari (1974). For related structures, see: Hökelek (1996, 2009a,b,c)); Greenaway et al. (1984); Necefoğlu et al. (2011).
Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: WinGX (Farrugia, 2012) and PLATON (Spek, 2009).
[Cu2(C8H5O3)4(C6H6N2O)4] | Z = 1 |
Mr = 1212.09 | F(000) = 622 |
Triclinic, P1 | Dx = 1.550 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 8.6462 (2) Å | Cell parameters from 6407 reflections |
b = 11.6709 (3) Å | θ = 2.4–27.8° |
c = 13.4339 (4) Å | µ = 0.90 mm−1 |
α = 87.876 (3)° | T = 100 K |
β = 83.483 (3)° | Rod, blue |
γ = 74.566 (2)° | 0.17 × 0.07 × 0.06 mm |
V = 1298.24 (6) Å3 |
Bruker Kappa APEXII CCD area-detector diffractometer | 6198 independent reflections |
Radiation source: fine-focus sealed tube | 4412 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.189 |
φ and ω scans | θmax = 28.2°, θmin = 1.5° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −11→11 |
Tmin = 0.927, Tmax = 0.947 | k = −15→15 |
19200 measured reflections | l = −16→17 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.078 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.204 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.11 | w = 1/[σ2(Fo2) + (0.076P)2 + 1.153P] where P = (Fo2 + 2Fc2)/3 |
6198 reflections | (Δ/σ)max < 0.001 |
389 parameters | Δρmax = 1.05 e Å−3 |
119 restraints | Δρmin = −1.51 e Å−3 |
[Cu2(C8H5O3)4(C6H6N2O)4] | γ = 74.566 (2)° |
Mr = 1212.09 | V = 1298.24 (6) Å3 |
Triclinic, P1 | Z = 1 |
a = 8.6462 (2) Å | Mo Kα radiation |
b = 11.6709 (3) Å | µ = 0.90 mm−1 |
c = 13.4339 (4) Å | T = 100 K |
α = 87.876 (3)° | 0.17 × 0.07 × 0.06 mm |
β = 83.483 (3)° |
Bruker Kappa APEXII CCD area-detector diffractometer | 6198 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 4412 reflections with I > 2σ(I) |
Tmin = 0.927, Tmax = 0.947 | Rint = 0.189 |
19200 measured reflections |
R[F2 > 2σ(F2)] = 0.078 | 119 restraints |
wR(F2) = 0.204 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.11 | Δρmax = 1.05 e Å−3 |
6198 reflections | Δρmin = −1.51 e Å−3 |
389 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cu1 | 0.62806 (7) | 0.56954 (5) | 0.88371 (4) | 0.0185 (2) | |
O1 | 0.6218 (4) | 0.7313 (3) | 0.8280 (2) | 0.0219 (8) | |
O2 | 0.8235 (4) | 0.6237 (3) | 0.7243 (3) | 0.0242 (8) | |
O3 | 0.7284 (4) | 0.3990 (3) | 0.8858 (2) | 0.0236 (8) | |
O4 | 0.6139 (4) | 0.3497 (3) | 1.0325 (3) | 0.0234 (8) | |
O5A | 0.5585 (8) | 1.2043 (6) | 0.4824 (4) | 0.0358 (16) | 0.65 |
O5B | 0.7922 (16) | 1.1019 (11) | 0.3972 (9) | 0.036 (3) | 0.35 |
O6 | 0.9826 (6) | −0.2505 (4) | 0.9067 (4) | 0.0539 (13) | |
O7 | 0.1544 (5) | 0.6109 (4) | 0.4944 (3) | 0.0413 (11) | |
O8 | 0.7785 (6) | 0.7769 (5) | 1.3297 (4) | 0.075 (2) | |
N1 | 0.5025 (5) | 0.5434 (4) | 0.7713 (3) | 0.0192 (8) | |
N2 | 0.7236 (5) | 0.6046 (4) | 1.0053 (3) | 0.0205 (9) | |
N3 | 0.2635 (6) | 0.4147 (4) | 0.4793 (3) | 0.0273 (10) | |
H3A | 0.2147 | 0.4101 | 0.4278 | 0.033* | |
H3B | 0.3264 | 0.3518 | 0.5024 | 0.033* | |
N4 | 0.9885 (5) | 0.6171 (4) | 1.3195 (3) | 0.0250 (9) | |
H4A | 1.0185 | 0.6325 | 1.3753 | 0.030* | |
H4B | 1.0426 | 0.5553 | 1.2859 | 0.030* | |
C1 | 0.7234 (6) | 0.7203 (4) | 0.7504 (4) | 0.0206 (10) | |
C2 | 0.7188 (6) | 0.8266 (4) | 0.6842 (4) | 0.0222 (10) | |
C3 | 0.8351 (7) | 0.8206 (5) | 0.6028 (4) | 0.0259 (11) | |
H3 | 0.9212 | 0.7530 | 0.5934 | 0.031* | |
C4 | 0.8234 (7) | 0.9140 (5) | 0.5363 (4) | 0.0299 (12) | |
H4 | 0.9015 | 0.9094 | 0.4819 | 0.036* | |
C5 | 0.6953 (8) | 1.0154 (5) | 0.5500 (4) | 0.0325 (13) | |
C6 | 0.5786 (7) | 1.0235 (5) | 0.6324 (4) | 0.0339 (13) | |
H6 | 0.4930 | 1.0913 | 0.6421 | 0.041* | |
C7 | 0.5923 (7) | 0.9294 (5) | 0.6992 (4) | 0.0286 (12) | |
H7 | 0.5163 | 0.9346 | 0.7548 | 0.034* | |
C8 | 0.6975 (5) | 0.3243 (4) | 0.9504 (3) | 0.0172 (9) | |
C9 | 0.7701 (6) | 0.1950 (4) | 0.9257 (4) | 0.0217 (10) | |
C10 | 0.7451 (7) | 0.1082 (5) | 0.9932 (4) | 0.0269 (11) | |
H10 | 0.6821 | 0.1294 | 1.0539 | 0.032* | |
C11 | 0.8139 (7) | −0.0111 (5) | 0.9706 (5) | 0.0319 (12) | |
H11 | 0.7989 | −0.0695 | 1.0168 | 0.038* | |
C12 | 0.9055 (7) | −0.0432 (5) | 0.8787 (5) | 0.0330 (13) | |
C13 | 0.9269 (7) | 0.0436 (5) | 0.8116 (4) | 0.0322 (13) | |
H13 | 0.9874 | 0.0222 | 0.7502 | 0.039* | |
C14 | 0.8600 (7) | 0.1626 (5) | 0.8333 (4) | 0.0283 (12) | |
H14 | 0.8749 | 0.2207 | 0.7866 | 0.034* | |
C15 | 0.3770 (6) | 0.6306 (5) | 0.7469 (4) | 0.0233 (10) | |
H15 | 0.3460 | 0.6994 | 0.7850 | 0.028* | |
C16 | 0.2918 (6) | 0.6235 (4) | 0.6686 (4) | 0.0233 (10) | |
H16 | 0.2064 | 0.6869 | 0.6537 | 0.028* | |
C17 | 0.3337 (6) | 0.5212 (4) | 0.6115 (3) | 0.0211 (10) | |
C18 | 0.4627 (7) | 0.4294 (5) | 0.6364 (4) | 0.0259 (11) | |
H18 | 0.4936 | 0.3591 | 0.6002 | 0.031* | |
C19 | 0.5449 (6) | 0.4434 (4) | 0.7153 (4) | 0.0223 (10) | |
H19 | 0.6324 | 0.3820 | 0.7308 | 0.027* | |
C20 | 0.6678 (6) | 0.7138 (4) | 1.0458 (4) | 0.0202 (10) | |
H20 | 0.5980 | 0.7726 | 1.0117 | 0.024* | |
C21 | 0.7102 (6) | 0.7416 (5) | 1.1354 (4) | 0.0237 (11) | |
H21 | 0.6680 | 0.8175 | 1.1618 | 0.028* | |
C22 | 0.8170 (6) | 0.6553 (5) | 1.1866 (4) | 0.0215 (10) | |
C23 | 0.8753 (6) | 0.5437 (4) | 1.1446 (4) | 0.0206 (10) | |
H23 | 0.9476 | 0.4840 | 1.1763 | 0.025* | |
C24 | 0.8253 (6) | 0.5224 (4) | 1.0555 (4) | 0.0204 (10) | |
H24 | 0.8643 | 0.4466 | 1.0285 | 0.024* | |
C25 | 0.6803 (9) | 1.1107 (6) | 0.4732 (4) | 0.0406 (15) | |
H25A | 0.748 (11) | 1.094 (8) | 0.410 (4) | 0.035* | 0.65 |
H25B | 0.622 (17) | 1.188 (4) | 0.500 (10) | 0.035* | 0.35 |
C26 | 0.9852 (8) | −0.1697 (6) | 0.8536 (5) | 0.0397 (15) | |
H26 | 1.042 (5) | −0.189 (4) | 0.793 (2) | 0.016 (14)* | |
C27 | 0.2415 (6) | 0.5188 (5) | 0.5231 (4) | 0.0241 (11) | |
C28 | 0.8602 (7) | 0.6880 (5) | 1.2856 (4) | 0.0268 (11) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cu1 | 0.0193 (4) | 0.0219 (3) | 0.0121 (3) | −0.0046 (2) | 0.0078 (2) | −0.0045 (2) |
O1 | 0.029 (2) | 0.0195 (16) | 0.0144 (17) | −0.0054 (15) | 0.0067 (14) | −0.0028 (13) |
O2 | 0.025 (2) | 0.0264 (17) | 0.0173 (18) | −0.0027 (15) | 0.0065 (15) | −0.0011 (14) |
O3 | 0.033 (2) | 0.0251 (17) | 0.0121 (17) | −0.0100 (16) | 0.0039 (15) | −0.0005 (14) |
O4 | 0.0201 (19) | 0.0293 (18) | 0.0181 (18) | −0.0055 (15) | 0.0093 (14) | −0.0068 (14) |
O5A | 0.048 (4) | 0.034 (3) | 0.023 (3) | −0.011 (3) | 0.004 (3) | 0.000 (3) |
O5B | 0.050 (9) | 0.027 (5) | 0.027 (6) | −0.009 (5) | 0.014 (5) | 0.008 (5) |
O6 | 0.046 (3) | 0.037 (2) | 0.079 (4) | −0.008 (2) | −0.008 (3) | −0.009 (2) |
O7 | 0.046 (3) | 0.038 (2) | 0.033 (2) | 0.006 (2) | −0.015 (2) | −0.0141 (19) |
O8 | 0.062 (3) | 0.083 (4) | 0.053 (3) | 0.043 (3) | −0.034 (3) | −0.053 (3) |
N1 | 0.015 (2) | 0.026 (2) | 0.015 (2) | −0.0069 (16) | 0.0081 (16) | −0.0036 (16) |
N2 | 0.023 (2) | 0.024 (2) | 0.014 (2) | −0.0075 (17) | 0.0065 (16) | −0.0044 (15) |
N3 | 0.038 (3) | 0.029 (2) | 0.015 (2) | −0.008 (2) | 0.0000 (19) | −0.0048 (17) |
N4 | 0.025 (2) | 0.031 (2) | 0.015 (2) | −0.0040 (19) | 0.0050 (18) | −0.0084 (18) |
C1 | 0.023 (3) | 0.025 (2) | 0.013 (2) | −0.006 (2) | 0.0030 (19) | −0.0040 (18) |
C2 | 0.025 (3) | 0.024 (2) | 0.016 (2) | −0.007 (2) | 0.006 (2) | −0.0051 (19) |
C3 | 0.028 (3) | 0.029 (2) | 0.019 (3) | −0.007 (2) | 0.006 (2) | −0.003 (2) |
C4 | 0.039 (3) | 0.033 (3) | 0.018 (3) | −0.014 (2) | 0.010 (2) | −0.003 (2) |
C5 | 0.050 (4) | 0.029 (3) | 0.019 (3) | −0.014 (2) | 0.006 (2) | 0.001 (2) |
C6 | 0.039 (4) | 0.027 (3) | 0.031 (3) | −0.003 (2) | 0.002 (2) | 0.000 (2) |
C7 | 0.032 (3) | 0.029 (2) | 0.021 (3) | −0.005 (2) | 0.011 (2) | −0.003 (2) |
C8 | 0.005 (2) | 0.024 (2) | 0.019 (2) | −0.0007 (18) | 0.0043 (18) | −0.0035 (18) |
C9 | 0.015 (3) | 0.024 (2) | 0.023 (3) | −0.0026 (19) | 0.006 (2) | −0.0065 (19) |
C10 | 0.022 (3) | 0.029 (2) | 0.027 (3) | −0.006 (2) | 0.006 (2) | −0.003 (2) |
C11 | 0.030 (3) | 0.026 (2) | 0.041 (3) | −0.010 (2) | −0.006 (2) | 0.004 (2) |
C12 | 0.027 (3) | 0.030 (3) | 0.042 (3) | −0.005 (2) | −0.004 (3) | −0.011 (2) |
C13 | 0.026 (3) | 0.034 (3) | 0.031 (3) | 0.000 (2) | 0.008 (2) | −0.016 (2) |
C14 | 0.027 (3) | 0.028 (3) | 0.026 (3) | −0.005 (2) | 0.008 (2) | −0.006 (2) |
C15 | 0.020 (3) | 0.027 (2) | 0.018 (3) | −0.002 (2) | 0.009 (2) | −0.007 (2) |
C16 | 0.021 (3) | 0.025 (2) | 0.020 (3) | −0.002 (2) | 0.006 (2) | −0.005 (2) |
C17 | 0.022 (3) | 0.029 (2) | 0.011 (2) | −0.008 (2) | 0.0121 (19) | −0.0041 (19) |
C18 | 0.030 (3) | 0.029 (2) | 0.016 (2) | −0.007 (2) | 0.010 (2) | −0.010 (2) |
C19 | 0.022 (3) | 0.024 (2) | 0.016 (2) | −0.001 (2) | 0.010 (2) | −0.0061 (19) |
C20 | 0.017 (3) | 0.022 (2) | 0.016 (2) | −0.0008 (19) | 0.0081 (19) | −0.0033 (18) |
C21 | 0.024 (3) | 0.025 (2) | 0.018 (2) | −0.002 (2) | 0.007 (2) | −0.0076 (19) |
C22 | 0.019 (3) | 0.030 (2) | 0.013 (2) | −0.006 (2) | 0.0054 (19) | −0.0025 (19) |
C23 | 0.021 (3) | 0.023 (2) | 0.014 (2) | −0.0026 (19) | 0.0085 (19) | −0.0035 (18) |
C24 | 0.016 (3) | 0.026 (2) | 0.015 (2) | −0.0045 (19) | 0.0124 (19) | −0.0042 (19) |
C25 | 0.063 (5) | 0.034 (3) | 0.024 (3) | −0.013 (3) | 0.002 (3) | 0.001 (2) |
C26 | 0.035 (4) | 0.034 (3) | 0.052 (4) | −0.009 (3) | −0.016 (3) | −0.003 (3) |
C27 | 0.025 (3) | 0.034 (3) | 0.012 (2) | −0.010 (2) | 0.011 (2) | −0.007 (2) |
C28 | 0.024 (3) | 0.035 (3) | 0.018 (3) | −0.001 (2) | 0.005 (2) | −0.010 (2) |
Cu1—O1 | 1.994 (3) | C7—C6 | 1.382 (8) |
Cu1—O2 | 2.736 (4) | C7—H7 | 0.9300 |
Cu1—O3 | 1.949 (4) | C8—C9 | 1.506 (7) |
Cu1—O4i | 2.242 (3) | C9—C10 | 1.378 (7) |
Cu1—N1 | 2.033 (4) | C9—C14 | 1.395 (7) |
Cu1—N2 | 2.013 (4) | C10—H10 | 0.9300 |
O1—C1 | 1.271 (6) | C11—C10 | 1.390 (7) |
O2—C1 | 1.259 (6) | C11—C12 | 1.395 (8) |
O3—C8 | 1.264 (6) | C11—H11 | 0.9300 |
O4—C8 | 1.248 (6) | C12—C13 | 1.366 (9) |
O4—Cu1i | 2.242 (3) | C13—H13 | 0.9300 |
O5A—C25 | 1.299 (9) | C14—C13 | 1.384 (7) |
O5A—H25B | 0.61 (19) | C14—H14 | 0.9300 |
O5B—C25 | 1.311 (11) | C15—C16 | 1.367 (7) |
O5B—H25A | 0.43 (10) | C15—H15 | 0.9300 |
O6—C26 | 1.165 (8) | C16—H16 | 0.9300 |
O7—C27 | 1.215 (7) | C17—C16 | 1.385 (6) |
N1—C15 | 1.338 (7) | C17—C27 | 1.508 (7) |
N1—C19 | 1.356 (6) | C18—C17 | 1.388 (8) |
N2—C20 | 1.349 (6) | C18—H18 | 0.9300 |
N2—C24 | 1.336 (7) | C19—C18 | 1.379 (7) |
N3—C27 | 1.328 (6) | C19—H19 | 0.9300 |
N3—H3A | 0.8600 | C20—C21 | 1.371 (7) |
N3—H3B | 0.8600 | C20—H20 | 0.9300 |
N4—C28 | 1.312 (7) | C21—C22 | 1.392 (7) |
N4—H4A | 0.8600 | C21—H21 | 0.9300 |
N4—H4B | 0.8600 | C22—C28 | 1.511 (7) |
C1—C2 | 1.494 (7) | C23—C22 | 1.381 (7) |
C3—C4 | 1.374 (7) | C23—C24 | 1.370 (7) |
C3—C2 | 1.389 (7) | C23—H23 | 0.9300 |
C3—H3 | 0.9300 | C24—H24 | 0.9300 |
C4—H4 | 0.9300 | C25—H25A | 0.97 (2) |
C5—C4 | 1.391 (8) | C25—H25B | 0.97 (2) |
C5—C25 | 1.479 (8) | C26—C12 | 1.487 (8) |
C6—C5 | 1.398 (8) | C26—H26 | 0.90 (2) |
C6—H6 | 0.9300 | C28—O8 | 1.220 (6) |
C7—C2 | 1.395 (7) | ||
O1—Cu1—O4i | 87.34 (13) | C12—C11—H11 | 120.0 |
O1—Cu1—N1 | 88.89 (15) | C11—C12—C26 | 121.4 (6) |
O1—Cu1—N2 | 90.93 (15) | C13—C12—C11 | 119.4 (5) |
O3—Cu1—O1 | 150.35 (14) | C13—C12—C26 | 119.2 (5) |
O3—Cu1—O4i | 121.93 (13) | C12—C13—C14 | 121.2 (5) |
O3—Cu1—N1 | 88.74 (16) | C12—C13—H13 | 119.4 |
O3—Cu1—N2 | 95.15 (16) | C14—C13—H13 | 119.4 |
N1—Cu1—O4i | 85.80 (14) | C9—C14—H14 | 120.3 |
N2—Cu1—O4i | 86.58 (15) | C13—C14—C9 | 119.5 (5) |
N2—Cu1—N1 | 172.37 (16) | C13—C14—H14 | 120.3 |
C1—O1—Cu1 | 108.3 (3) | N1—C15—C16 | 123.3 (4) |
C8—O3—Cu1 | 127.1 (3) | N1—C15—H15 | 118.4 |
C8—O4—Cu1i | 148.5 (3) | C16—C15—H15 | 118.4 |
C15—N1—Cu1 | 119.3 (3) | C15—C16—C17 | 119.6 (5) |
C15—N1—C19 | 117.5 (4) | C15—C16—H16 | 120.2 |
C19—N1—Cu1 | 123.1 (4) | C17—C16—H16 | 120.2 |
C20—N2—Cu1 | 118.3 (4) | C16—C17—C18 | 117.9 (5) |
C24—N2—Cu1 | 123.9 (3) | C16—C17—C27 | 118.0 (5) |
C24—N2—C20 | 117.3 (4) | C18—C17—C27 | 124.1 (4) |
C27—N3—H3A | 120.0 | C17—C18—H18 | 120.3 |
C27—N3—H3B | 120.0 | C19—C18—C17 | 119.4 (4) |
H3A—N3—H3B | 120.0 | C19—C18—H18 | 120.3 |
C28—N4—H4A | 120.0 | N1—C19—C18 | 122.3 (5) |
C28—N4—H4B | 120.0 | N1—C19—H19 | 118.8 |
H4A—N4—H4B | 120.0 | C18—C19—H19 | 118.8 |
O1—C1—C2 | 118.2 (4) | N2—C20—C21 | 122.5 (5) |
O2—C1—O1 | 123.6 (5) | N2—C20—H20 | 118.7 |
O2—C1—C2 | 118.2 (4) | C21—C20—H20 | 118.7 |
C3—C2—C7 | 119.5 (5) | C20—C21—C22 | 119.4 (5) |
C3—C2—C1 | 119.9 (5) | C20—C21—H21 | 120.3 |
C7—C2—C1 | 120.5 (4) | C22—C21—H21 | 120.3 |
C2—C3—H3 | 119.9 | C21—C22—C28 | 118.3 (5) |
C4—C3—C2 | 120.2 (5) | C23—C22—C21 | 118.0 (5) |
C4—C3—H3 | 119.9 | C23—C22—C28 | 123.7 (5) |
C4—C5—C6 | 120.2 (5) | C22—C23—H23 | 120.5 |
C4—C5—C25 | 118.8 (5) | C24—C23—C22 | 119.0 (5) |
C6—C5—C25 | 121.0 (6) | C24—C23—H23 | 120.5 |
C3—C4—C5 | 120.3 (5) | N2—C24—C23 | 123.6 (5) |
C3—C4—H4 | 119.9 | N2—C24—H24 | 118.2 |
C5—C4—H4 | 119.9 | C23—C24—H24 | 118.2 |
C5—C6—H6 | 120.5 | O5A—C25—O5B | 120.1 (8) |
C7—C6—C5 | 119.0 (5) | O5A—C25—C5 | 119.9 (6) |
C7—C6—H6 | 120.5 | O5B—C25—C5 | 119.9 (8) |
C2—C7—H7 | 119.6 | O5A—C25—H25A | 120 (5) |
C6—C7—C2 | 120.8 (5) | C5—C25—H25A | 118 (5) |
C6—C7—H7 | 119.6 | O5B—C25—H25B | 120 (5) |
O3—C8—C9 | 116.7 (4) | C5—C25—H25B | 113 (7) |
O4—C8—O3 | 125.1 (5) | H25A—C25—H25B | 127 (8) |
O4—C8—C9 | 118.2 (4) | O6—C26—C12 | 125.3 (7) |
C10—C9—C8 | 120.2 (4) | O6—C26—H26 | 114 (3) |
C10—C9—C14 | 119.8 (5) | C12—C26—H26 | 120 (3) |
C14—C9—C8 | 120.0 (5) | O7—C27—N3 | 123.4 (5) |
C9—C10—C11 | 120.0 (5) | O7—C27—C17 | 119.3 (5) |
C9—C10—H10 | 120.0 | N3—C27—C17 | 117.3 (5) |
C11—C10—H10 | 120.0 | O8—C28—N4 | 123.1 (5) |
C10—C11—C12 | 120.1 (5) | O8—C28—C22 | 120.3 (5) |
C10—C11—H11 | 120.0 | N4—C28—C22 | 116.6 (4) |
O3—Cu1—O1—C1 | 9.8 (5) | C6—C5—C25—O5A | 0.9 (9) |
O4i—Cu1—O1—C1 | −161.5 (3) | C6—C5—C25—O5B | 179.1 (9) |
N1—Cu1—O1—C1 | −75.7 (3) | C7—C6—C5—C4 | −0.4 (9) |
N2—Cu1—O1—C1 | 111.9 (3) | C7—C6—C5—C25 | 176.2 (6) |
O1—Cu1—O3—C8 | 169.2 (4) | C6—C7—C2—C1 | −173.4 (5) |
O4i—Cu1—O3—C8 | −21.0 (4) | C6—C7—C2—C3 | 2.1 (8) |
N1—Cu1—O3—C8 | −105.2 (4) | C2—C7—C6—C5 | −1.1 (9) |
N2—Cu1—O3—C8 | 68.2 (4) | O3—C8—C9—C10 | 178.6 (5) |
O1—Cu1—N1—C19 | 132.7 (4) | O3—C8—C9—C14 | −2.8 (7) |
O3—Cu1—N1—C15 | 165.9 (4) | O4—C8—C9—C10 | −0.7 (7) |
O3—Cu1—N1—C19 | −17.7 (4) | O4—C8—C9—C14 | 177.9 (5) |
O4i—Cu1—N1—C15 | 43.8 (4) | C8—C9—C10—C11 | −179.2 (5) |
O4i—Cu1—N1—C19 | −139.9 (4) | C14—C9—C10—C11 | 2.2 (8) |
O1—Cu1—N2—C20 | 39.5 (3) | C8—C9—C14—C13 | 179.6 (5) |
O1—Cu1—N2—C24 | −148.6 (4) | C10—C9—C14—C13 | −1.7 (8) |
O3—Cu1—N2—C20 | −169.5 (3) | C12—C11—C10—C9 | −1.4 (8) |
O3—Cu1—N2—C24 | 2.4 (4) | C10—C11—C12—C13 | 0.1 (9) |
O4i—Cu1—N2—C20 | −47.7 (3) | C10—C11—C12—C26 | 178.0 (5) |
O4i—Cu1—N2—C24 | 124.1 (4) | C11—C12—C13—C14 | 0.3 (9) |
Cu1—O1—C1—O2 | −8.7 (6) | C26—C12—C13—C14 | −177.6 (5) |
Cu1—O1—C1—C2 | 168.4 (3) | C9—C14—C13—C12 | 0.5 (9) |
Cu1—O3—C8—O4 | −11.3 (7) | N1—C15—C16—C17 | 1.0 (8) |
Cu1—O3—C8—C9 | 169.5 (3) | C18—C17—C16—C15 | −0.4 (7) |
Cu1i—O4—C8—O3 | 65.4 (8) | C27—C17—C16—C15 | −177.4 (4) |
Cu1i—O4—C8—C9 | −115.4 (6) | C16—C17—C27—O7 | 12.4 (7) |
Cu1—N1—C15—C16 | 176.0 (4) | C16—C17—C27—N3 | −169.0 (4) |
C19—N1—C15—C16 | −0.6 (7) | C18—C17—C27—O7 | −164.4 (5) |
Cu1—N1—C19—C18 | −177.0 (4) | C18—C17—C27—N3 | 14.2 (7) |
C15—N1—C19—C18 | −0.5 (7) | C19—C18—C17—C16 | −0.6 (7) |
Cu1—N2—C20—C21 | 171.6 (4) | C19—C18—C17—C27 | 176.2 (4) |
C24—N2—C20—C21 | −0.8 (7) | N1—C19—C18—C17 | 1.1 (7) |
Cu1—N2—C24—C23 | −172.2 (3) | N2—C20—C21—C22 | 1.2 (7) |
C20—N2—C24—C23 | −0.2 (7) | C20—C21—C22—C23 | −0.5 (7) |
O1—C1—C2—C3 | 175.4 (5) | C20—C21—C22—C28 | −179.4 (4) |
O1—C1—C2—C7 | −9.1 (7) | C21—C22—C28—O8 | 15.8 (8) |
O2—C1—C2—C3 | −7.3 (7) | C21—C22—C28—N4 | −163.5 (5) |
O2—C1—C2—C7 | 168.2 (5) | C23—C22—C28—O8 | −163.0 (6) |
C4—C3—C2—C1 | 174.0 (5) | C23—C22—C28—N4 | 17.6 (7) |
C4—C3—C2—C7 | −1.6 (8) | C24—C23—C22—C21 | −0.5 (7) |
C2—C3—C4—C5 | 0.1 (8) | C24—C23—C22—C28 | 178.3 (4) |
C6—C5—C4—C3 | 0.9 (9) | C22—C23—C24—N2 | 0.9 (7) |
C25—C5—C4—C3 | −175.8 (5) | O6—C26—C12—C11 | −2.0 (10) |
C4—C5—C25—O5A | 177.5 (6) | O6—C26—C12—C13 | 175.9 (6) |
C4—C5—C25—O5B | −4.2 (11) |
Symmetry code: (i) −x+1, −y+1, −z+2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3A···O2ii | 0.86 | 2.17 | 2.997 (6) | 160 |
N3—H3B···O5Aiii | 0.86 | 2.27 | 3.044 (9) | 149 |
N4—H4A···O7iv | 0.86 | 2.06 | 2.878 (6) | 158 |
N4—H4B···O2v | 0.86 | 2.10 | 2.890 (6) | 152 |
C3—H3···O7vi | 0.93 | 2.52 | 3.391 (7) | 155 |
C6—H6···O8vii | 0.93 | 2.44 | 3.336 (9) | 162 |
C18—H18···O5Aiii | 0.93 | 2.35 | 3.274 (9) | 169 |
C23—H23···O2v | 0.93 | 2.54 | 3.432 (7) | 162 |
C24—H24···O6viii | 0.93 | 2.50 | 3.217 (7) | 134 |
Symmetry codes: (ii) −x+1, −y+1, −z+1; (iii) x, y−1, z; (iv) x+1, y, z+1; (v) −x+2, −y+1, −z+2; (vi) x+1, y, z; (vii) −x+1, −y+2, −z+2; (viii) −x+2, −y, −z+2. |
Experimental details
Crystal data | |
Chemical formula | [Cu2(C8H5O3)4(C6H6N2O)4] |
Mr | 1212.09 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 8.6462 (2), 11.6709 (3), 13.4339 (4) |
α, β, γ (°) | 87.876 (3), 83.483 (3), 74.566 (2) |
V (Å3) | 1298.24 (6) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 0.90 |
Crystal size (mm) | 0.17 × 0.07 × 0.06 |
Data collection | |
Diffractometer | Bruker Kappa APEXII CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.927, 0.947 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 19200, 6198, 4412 |
Rint | 0.189 |
(sin θ/λ)max (Å−1) | 0.665 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.078, 0.204, 1.11 |
No. of reflections | 6198 |
No. of parameters | 389 |
No. of restraints | 119 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 1.05, −1.51 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 2012), WinGX (Farrugia, 2012) and PLATON (Spek, 2009).
Cu1—O1 | 1.994 (3) | Cu1—O4i | 2.242 (3) |
Cu1—O2 | 2.736 (4) | Cu1—N1 | 2.033 (4) |
Cu1—O3 | 1.949 (4) | Cu1—N2 | 2.013 (4) |
Symmetry code: (i) −x+1, −y+1, −z+2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3A···O2ii | 0.86 | 2.17 | 2.997 (6) | 160 |
N3—H3B···O5Aiii | 0.86 | 2.27 | 3.044 (9) | 149 |
N4—H4A···O7iv | 0.86 | 2.06 | 2.878 (6) | 158 |
N4—H4B···O2v | 0.86 | 2.10 | 2.890 (6) | 152 |
C3—H3···O7vi | 0.93 | 2.52 | 3.391 (7) | 155 |
C6—H6···O8vii | 0.93 | 2.44 | 3.336 (9) | 162 |
C18—H18···O5Aiii | 0.93 | 2.35 | 3.274 (9) | 169 |
C23—H23···O2v | 0.93 | 2.54 | 3.432 (7) | 162 |
C24—H24···O6viii | 0.93 | 2.50 | 3.217 (7) | 134 |
Symmetry codes: (ii) −x+1, −y+1, −z+1; (iii) x, y−1, z; (iv) x+1, y, z+1; (v) −x+2, −y+1, −z+2; (vi) x+1, y, z; (vii) −x+1, −y+2, −z+2; (viii) −x+2, −y, −z+2. |
As a part of our ongoing investigation on transition metal complexes of nicotinamide (NA), one form of niacin (Krishnamachari, 1974), and/or the nicotinic acid derivative N,N-diethylnicotinamide (DENA), an important respiratory stimulant (Bigoli et al., 1972), the title compound , [Cu2(C8H5O3)4(C6H6N2O)4], was synthesized and its crystal structure is reported herein.
The asymmetric unit of the centrosymmetric dinuclear title compound contains one half of the complex molecule. The structures of some DENA and/or NA complexes with ZnII, viz. [Zn2(C11H14NO2)4(C10H14N2O)2] (Hökelek et al., 2009a), [Zn2(C8H8NO2)4(C10H14N2O)2].2H2O (Hökelek et al., 2009b) and [Zn2(C7H4FO2)4(C6H6N2O)2].C7H5FO2 (Hökelek et al., 2009c) have also been determined.
In the title dinuclear compound the Cu2+ cations are bridged by two carboxylate groups of two 4-formylbenzoate (FOB) anions. The two bridging FOB anions, one chelating FOB anion and two isonicotinamide (INA) ligands coordinate to each Cu2+ cation in a distorted octahedral geometry. Each CuII atom is surrounded by three FOB anions and two INA ligands. The INA ligands are coordinated to the CuII ion through pyridine N atoms only. Two FOB anions act as bridging ligands, while the other FOB anion is coordinated to the CuII ion bidentately. The Cu1···Cu1a distance is 4.1554 (8) Å. The four O atoms around the Cu1 atom form a distorted square-planar arrangement with an average Cu1—O bond length of 2.23 Å (Table 1). The distorted octahedral coordination is completed by the pyridine atoms, N1 and N2 of the INA ligands at distances of 2.033 (4) and 2.013 (4) Å, respectively (Table 1, Fig. 1). The N1—Cu1···Cu1a and N2—Cu1···Cu1a angles (a = x, - y, - z) are 97.62 (12) and 77.27 (12) °, respectively. The dihedral angles between the planar carboxylate groups (O1/O2/C1), (O3/O4/C8) and the adjacent benzene rings A (C2—C7), B (C9—C14) are 11.3 (6)° and 2.1 (6)°, respectively, while that between rings A and B is A/B = 25.1 (3)°. The pyridine rings C (N1/C15—C19) and D (N2/C20—C24) are oriented at a dihedral angle of 12.6 (3)°. The O1—Cu1—O2 angle involving the chelating FOB anion is 53.50 (14)°.
The corresponding O—Cu—O angles are 57.75 (2)° in [Cu(C7H4FO2)2(C7H5FO2)(C6H6N2O)2] (Necefoğlu et al., 2011), 58.3 (3)° in [Cu(C7H5O2)2(C10H14N2O)2] (Hökelek et al., 1996) and 55.2 (1)° in [Cu(Asp)2(py)2] (where Asp is acetylsalicylate and py is pyridine) (Greenaway et al., 1984).
In the crystal structure, N—H···O and C–H···O hydrogen bonds (Table 2) link the molecules into a three-dimensional network, in which they may be effective in the stabilization of the structure. The shortest π–π contact between the pyridine rings, Cg3—Cg4i [symmetry code: (i) 1 - x, 1 - y, - z, where Cg3 and Cg4 are the centroids of the rings C (N1/C15—C19) and D (N2/C20—C24), respectively] may further stabilize the structure, with a centroid-centroid distance of 3.821 (3) Å.