Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S2414314618014827/wm4088sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S2414314618014827/wm4088Isup2.hkl |
CCDC reference: 1874254
Key indicators
- Single-crystal X-ray study
- T = 163 K
- Mean (C-C) = 0.005 Å
- R factor = 0.022
- wR factor = 0.047
- Data-to-parameter ratio = 20.6
checkCIF/PLATON results
No syntax errors found Datablock: I
Alert level C PLAT260_ALERT_2_C Large Average Ueq of Residue Including O1 0.089 Check
Alert level G PLAT007_ALERT_5_G Number of Unrefined Donor-H Atoms .............. 1 Report PLAT042_ALERT_1_G Calc. and Reported MoietyFormula Strings Differ Please Check PLAT063_ALERT_4_G Crystal Size Likely too Large for Beam Size .... 0.70 mm PLAT304_ALERT_4_G Non-Integer Number of Atoms in ...... Resd 3 0.25 Check PLAT794_ALERT_5_G Tentative Bond Valency for Rh1 (III) . 2.97 Info PLAT910_ALERT_3_G Missing # of FCF Reflection(s) Below Theta(Min). 2 Note PLAT912_ALERT_4_G Missing # of FCF Reflections Above STh/L= 0.600 6 Note PLAT978_ALERT_2_G Number C-C Bonds with Positive Residual Density. 1 Info
0 ALERT level A = Most likely a serious problem - resolve or explain 0 ALERT level B = A potentially serious problem, consider carefully 1 ALERT level C = Check. Ensure it is not caused by an omission or oversight 8 ALERT level G = General information/check it is not something unexpected 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 2 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 3 ALERT type 4 Improvement, methodology, query or suggestion 2 ALERT type 5 Informative message, check
Data collection: RAPID-AUTO (Rigaku, 2006); cell refinement: RAPID-AUTO (Rigaku, 2006); data reduction: RAPID-AUTO (Rigaku, 2006); program(s) used to solve structure: SIR2014 (Burla et al., 2012); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015); molecular graphics: CrystalMaker (Palmer et al., 2017); software used to prepare material for publication: SHELXL2014 (Sheldrick, 2015).
[RhCl2(C5H5N)4]Cl·4CH4O | Dx = 1.416 Mg m−3 |
Mr = 653.83 | Mo Kα radiation, λ = 0.71075 Å |
Tetragonal, P4c2 | Cell parameters from 13381 reflections |
a = 7.6130 (7) Å | θ = 3.1–27.5° |
c = 26.461 (3) Å | µ = 0.85 mm−1 |
V = 1533.7 (3) Å3 | T = 163 K |
Z = 2 | Platelet, yellow |
F(000) = 672 | 0.70 × 0.60 × 0.30 mm |
Rigaku R-AXIS RAPID diffractometer | 1605 reflections with I > 2σ(I) |
Detector resolution: 10.00 pixels mm-1 | Rint = 0.038 |
ω scans | θmax = 27.5°, θmin = 3.1° |
Absorption correction: numerical (NUMABS; Higashi, 1999) | h = −9→9 |
Tmin = 0.611, Tmax = 0.775 | k = −8→9 |
13753 measured reflections | l = −34→34 |
1749 independent reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.022 | H-atom parameters constrained |
wR(F2) = 0.047 | w = 1/[σ2(Fo2) + (0.0221P)2 + 0.2836P] where P = (Fo2 + 2Fc2)/3 |
S = 1.03 | (Δ/σ)max < 0.001 |
1749 reflections | Δρmax = 0.22 e Å−3 |
85 parameters | Δρmin = −0.47 e Å−3 |
0 restraints | Absolute structure: Flack x determined using 652 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013) |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.043 (19) |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. The H atom of the methanol hydroxy group was located from a difference Fourier map. Afterwards it was refined using a riding model, with O—H = 0.84 Å. For other H atoms, C—H = 0.95 (aromatic) or 0.98 (methyl) Å, with Uiso(H) = 1.2 Ueq(C, O) were applied. |
x | y | z | Uiso*/Ueq | ||
Rh1 | 0.0000 | 0.0000 | 0.2500 | 0.02029 (9) | |
Cl1 | 0.21783 (6) | −0.21783 (6) | 0.2500 | 0.02777 (16) | |
Cl2 | 0.5000 | 0.5000 | 0.0000 | 0.0462 (3) | |
O1 | 0.7689 (6) | 0.2828 (5) | 0.06260 (15) | 0.0971 (16) | |
H1 | 0.7245 | 0.3530 | 0.0417 | 0.116* | |
N1 | 0.1360 (4) | 0.1368 (4) | 0.19521 (6) | 0.0238 (3) | |
C1 | 0.0516 (4) | 0.2088 (4) | 0.15529 (10) | 0.0285 (6) | |
H1A | −0.0724 | 0.1973 | 0.1529 | 0.034* | |
C2 | 0.1408 (4) | 0.2984 (4) | 0.11805 (11) | 0.0347 (6) | |
H2 | 0.0782 | 0.3457 | 0.0901 | 0.042* | |
C3 | 0.3185 (6) | 0.3196 (6) | 0.12101 (9) | 0.0406 (6) | |
H3 | 0.3802 | 0.3823 | 0.0956 | 0.049* | |
C4 | 0.4079 (4) | 0.2473 (4) | 0.16217 (12) | 0.0376 (7) | |
H4 | 0.5316 | 0.2598 | 0.1653 | 0.045* | |
C5 | 0.3125 (4) | 0.1571 (4) | 0.19829 (10) | 0.0296 (6) | |
H5 | 0.3730 | 0.1075 | 0.2263 | 0.035* | |
C6 | 0.7411 (7) | 0.1140 (7) | 0.0467 (2) | 0.0807 (15) | |
H6A | 0.7246 | 0.1127 | 0.0100 | 0.097* | |
H6B | 0.6359 | 0.0669 | 0.0632 | 0.097* | |
H6C | 0.8429 | 0.0415 | 0.0556 | 0.097* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Rh1 | 0.02015 (11) | 0.02015 (11) | 0.02056 (14) | 0.00233 (13) | 0.000 | 0.000 |
Cl1 | 0.0266 (2) | 0.0266 (2) | 0.0301 (3) | 0.0081 (3) | 0.0019 (6) | 0.0019 (6) |
Cl2 | 0.0557 (4) | 0.0557 (4) | 0.0273 (5) | 0.000 | 0.000 | 0.000 |
O1 | 0.095 (3) | 0.082 (3) | 0.115 (3) | 0.028 (3) | −0.058 (3) | −0.027 (2) |
N1 | 0.0238 (19) | 0.0239 (19) | 0.0236 (8) | 0.0016 (7) | 0.0009 (14) | −0.0002 (13) |
C1 | 0.0256 (13) | 0.0294 (14) | 0.0305 (13) | 0.0026 (10) | −0.0050 (10) | 0.0010 (11) |
C2 | 0.0383 (16) | 0.0362 (16) | 0.0297 (13) | 0.0023 (13) | −0.0047 (12) | 0.0102 (13) |
C3 | 0.044 (3) | 0.039 (3) | 0.0387 (12) | −0.0061 (11) | 0.006 (2) | 0.014 (2) |
C4 | 0.0258 (16) | 0.0442 (19) | 0.0428 (15) | −0.0060 (13) | −0.0012 (13) | 0.0104 (14) |
C5 | 0.0243 (14) | 0.0344 (15) | 0.0300 (12) | 0.0014 (11) | −0.0031 (11) | 0.0063 (11) |
C6 | 0.072 (3) | 0.059 (3) | 0.111 (4) | 0.013 (3) | −0.009 (3) | 0.002 (3) |
Rh1—N1 | 2.0638 (17) | C1—H1A | 0.9500 |
Rh1—N1i | 2.0638 (17) | C2—C3 | 1.365 (5) |
Rh1—N1ii | 2.0638 (17) | C2—H2 | 0.9500 |
Rh1—N1iii | 2.0638 (17) | C3—C4 | 1.397 (5) |
Rh1—Cl1 | 2.3452 (7) | C3—H3 | 0.9500 |
Rh1—Cl1ii | 2.3452 (7) | C4—C5 | 1.383 (4) |
O1—C6 | 1.368 (6) | C4—H4 | 0.9500 |
O1—H1 | 0.8400 | C5—H5 | 0.9500 |
N1—C5 | 1.355 (4) | C6—H6A | 0.9800 |
N1—C1 | 1.352 (4) | C6—H6B | 0.9800 |
C1—C2 | 1.377 (4) | C6—H6C | 0.9800 |
N1—Rh1—N1i | 89.26 (10) | N1—C1—H1A | 119.2 |
N1—Rh1—N1ii | 90.74 (10) | C2—C1—H1A | 119.2 |
N1i—Rh1—N1ii | 179.7 (2) | C3—C2—C1 | 120.4 (3) |
N1—Rh1—N1iii | 179.7 (2) | C3—C2—H2 | 119.8 |
N1i—Rh1—N1iii | 90.74 (10) | C1—C2—H2 | 119.8 |
N1ii—Rh1—N1iii | 89.26 (10) | C2—C3—C4 | 118.8 (2) |
N1—Rh1—Cl1 | 90.13 (12) | C2—C3—H3 | 120.6 |
N1i—Rh1—Cl1 | 89.87 (12) | C4—C3—H3 | 120.6 |
N1ii—Rh1—Cl1 | 89.87 (12) | C5—C4—C3 | 118.6 (3) |
N1iii—Rh1—Cl1 | 90.13 (12) | C5—C4—H4 | 120.7 |
N1—Rh1—Cl1ii | 89.87 (12) | C3—C4—H4 | 120.7 |
N1i—Rh1—Cl1ii | 90.13 (12) | N1—C5—C4 | 122.4 (3) |
N1ii—Rh1—Cl1ii | 90.13 (12) | N1—C5—H5 | 118.8 |
N1iii—Rh1—Cl1ii | 89.87 (12) | C4—C5—H5 | 118.8 |
Cl1—Rh1—Cl1ii | 180.0 | O1—C6—H6A | 109.5 |
C6—O1—H1 | 109.5 | O1—C6—H6B | 109.5 |
C5—N1—C1 | 118.2 (2) | H6A—C6—H6B | 109.5 |
C5—N1—Rh1 | 120.8 (2) | O1—C6—H6C | 109.5 |
C1—N1—Rh1 | 121.0 (2) | H6A—C6—H6C | 109.5 |
N1—C1—C2 | 121.7 (3) | H6B—C6—H6C | 109.5 |
C5—N1—C1—C2 | 1.0 (5) | C2—C3—C4—C5 | 0.0 (6) |
Rh1—N1—C1—C2 | −179.1 (2) | C1—N1—C5—C4 | −0.3 (5) |
N1—C1—C2—C3 | −1.2 (6) | Rh1—N1—C5—C4 | 179.7 (2) |
C1—C2—C3—C4 | 0.7 (6) | C3—C4—C5—N1 | −0.2 (5) |
Symmetry codes: (i) y, x, −z+1/2; (ii) −x, −y, z; (iii) −y, −x, −z+1/2. |