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In the crystal of the title compound, adjacent mol­ecules are connected by inter­molecular C—H...O hydrogen bonds, forming a three-dimensional network.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S205698902300333X/wm5679sup1.cif
Contains datablocks I, global

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S205698902300333X/wm5679Isup2.hkl
Contains datablock I

CCDC reference: 2255517

Key indicators

Structure: I
  • Single-crystal X-ray study
  • T = 100 K
  • Mean [sigma](C-C) = 0.003 Å
  • R factor = 0.031
  • wR factor = 0.082
  • Data-to-parameter ratio = 15.8

checkCIF/PLATON results

No syntax errors found



Alert level C PLAT094_ALERT_2_C Ratio of Maximum / Minimum Residual Density .... 3.42 Report
Alert level G PLAT398_ALERT_2_G Deviating C-O-C Angle From 120 for O10 . 61.4 Degree PLAT791_ALERT_4_G Model has Chirality at C3 (Sohnke SpGr) R Verify PLAT791_ALERT_4_G Model has Chirality at C3A (Sohnke SpGr) S Verify PLAT791_ALERT_4_G Model has Chirality at C5A (Sohnke SpGr) S Verify PLAT791_ALERT_4_G Model has Chirality at C6 (Sohnke SpGr) S Verify PLAT791_ALERT_4_G Model has Chirality at C7 (Sohnke SpGr) S Verify PLAT791_ALERT_4_G Model has Chirality at C8 (Sohnke SpGr) R Verify PLAT791_ALERT_4_G Model has Chirality at C9A (Sohnke SpGr) R Verify PLAT791_ALERT_4_G Model has Chirality at C9B (Sohnke SpGr) S Verify PLAT912_ALERT_4_G Missing # of FCF Reflections Above STh/L= 0.600 2 Note PLAT978_ALERT_2_G Number C-C Bonds with Positive Residual Density. 10 Info
0 ALERT level A = Most likely a serious problem - resolve or explain 0 ALERT level B = A potentially serious problem, consider carefully 1 ALERT level C = Check. Ensure it is not caused by an omission or oversight 11 ALERT level G = General information/check it is not something unexpected 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 3 ALERT type 2 Indicator that the structure model may be wrong or deficient 0 ALERT type 3 Indicator that the structure quality may be low 9 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check

Computing details top

Data collection: CrysAlis PRO (Rigaku OD, 2022); cell refinement: CrysAlis PRO (Rigaku OD, 2022); data reduction: CrysAlis PRO (Rigaku OD, 2022); program(s) used to solve structure: SHELXT (Sheldrick, 2015a); program(s) used to refine structure: SHELXL (Sheldrick, 2015b); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: PLATON (Spek, 2020).

(5aS,8aR)-3,5a-Dimethyl-8-methylidene-2-oxododecahydrooxireno[2',3':6,7]naphtho[1,2-b]furan-6-yl (Z)-2-methylbut-2-enoate top
Crystal data top
C20H26O5Dx = 1.305 Mg m3
Mr = 346.41Cu Kα radiation, λ = 1.54184 Å
Orthorhombic, P212121Cell parameters from 16716 reflections
a = 7.11296 (5) Åθ = 3.9–77.3°
b = 15.4597 (10) ŵ = 0.76 mm1
c = 16.0358 (10) ÅT = 100 K
V = 1763.36 (16) Å3Prism, yellow
Z = 40.21 × 0.18 × 0.13 mm
F(000) = 744
Data collection top
XtaLAB Synergy, Dualflex, HyPix
diffractometer
3717 reflections with I > 2σ(I)
Radiation source: micro-focus sealed X-ray tubeRint = 0.024
φ and ω scansθmax = 77.8°, θmin = 4.0°
Absorption correction: gaussian
(CrysAlis PRO; Rigaku OD, 2022)
h = 98
Tmin = 0.674, Tmax = 1.000k = 1916
19755 measured reflectionsl = 1820
3751 independent reflections
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.031H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.082 w = 1/[σ2(Fo2) + (0.0444P)2 + 0.4585P]
where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max < 0.001
3751 reflectionsΔρmax = 0.56 e Å3
238 parametersΔρmin = 0.16 e Å3
0 restraintsAbsolute structure: Flack x determined using 1576 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al, 2013).
Primary atom site location: difference Fourier mapAbsolute structure parameter: 0.01 (4)
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
O10.27214 (18)0.55551 (9)0.81184 (8)0.0258 (3)
O20.1708 (2)0.66397 (9)0.89164 (9)0.0325 (3)
O30.62078 (17)0.61814 (8)0.55679 (8)0.0217 (3)
O40.7139 (2)0.60760 (8)0.42338 (8)0.0316 (3)
C20.2969 (3)0.61638 (12)0.87107 (10)0.0257 (4)
C30.4949 (3)0.61151 (12)0.90431 (11)0.0278 (4)
H30.49360.56930.95160.033*
C3A0.6045 (3)0.56914 (11)0.83285 (11)0.0237 (4)
H3A0.70260.53000.85680.028*
C40.6965 (3)0.62980 (11)0.76998 (11)0.0259 (4)
H4A0.78930.66750.79830.031*
H4B0.60030.66700.74340.031*
C50.7941 (3)0.57422 (12)0.70428 (12)0.0270 (4)
H5A0.89940.54290.73110.032*
H5B0.84830.61270.66120.032*
C5A0.6636 (2)0.50725 (11)0.66081 (11)0.0220 (3)
C60.6543 (3)0.52614 (11)0.56680 (11)0.0226 (3)
H60.77980.51240.54200.027*
C70.5062 (3)0.47385 (11)0.52056 (11)0.0234 (4)
H70.54770.44540.46770.028*
C80.3552 (3)0.42987 (11)0.56746 (11)0.0227 (3)
H80.30550.37500.54280.027*
C90.3431 (2)0.43826 (11)0.65931 (11)0.0217 (3)
C9A0.4598 (2)0.51073 (10)0.69607 (10)0.0194 (3)
H9A0.40330.56600.67560.023*
C9B0.4515 (2)0.51404 (11)0.79115 (10)0.0219 (3)
H9B0.45430.45400.81430.026*
O100.31873 (19)0.50878 (8)0.52107 (8)0.0254 (3)
C100.5680 (4)0.69679 (14)0.93885 (14)0.0379 (5)
H10A0.56240.74120.89530.057*
H10B0.69840.68950.95720.057*
H10C0.49020.71460.98630.057*
C110.7473 (3)0.41612 (12)0.67128 (13)0.0295 (4)
H11A0.74500.39990.73030.044*
H11B0.87740.41590.65110.044*
H11C0.67290.37460.63900.044*
C120.6677 (3)0.65206 (11)0.48211 (11)0.0214 (3)
C130.6622 (2)0.74835 (11)0.48349 (10)0.0201 (3)
C140.6640 (2)0.79339 (11)0.41196 (11)0.0215 (3)
H140.66580.85460.41770.026*
C150.6619 (3)0.79287 (11)0.56742 (11)0.0224 (3)
H15A0.54410.78000.59660.034*
H15B0.67320.85550.55940.034*
H15C0.76820.77200.60070.034*
C160.6635 (3)0.75991 (11)0.32443 (11)0.0245 (4)
H16A0.61560.80480.28680.037*
H16B0.58260.70870.32100.037*
H16C0.79180.74430.30810.037*
C170.2362 (3)0.38217 (12)0.70195 (12)0.0251 (4)
H17A0.165 (3)0.3387 (14)0.6752 (13)0.018 (5)*
H17B0.218 (3)0.3870 (14)0.7618 (15)0.028 (6)*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O10.0248 (6)0.0325 (6)0.0203 (6)0.0019 (5)0.0003 (5)0.0013 (5)
O20.0399 (8)0.0341 (7)0.0234 (6)0.0069 (6)0.0046 (6)0.0021 (5)
O30.0268 (6)0.0167 (5)0.0218 (6)0.0001 (5)0.0052 (5)0.0007 (5)
O40.0485 (8)0.0216 (6)0.0247 (6)0.0013 (6)0.0106 (6)0.0019 (5)
C20.0347 (10)0.0268 (8)0.0156 (7)0.0025 (8)0.0019 (7)0.0039 (6)
C30.0355 (10)0.0264 (9)0.0214 (8)0.0034 (8)0.0035 (8)0.0013 (7)
C3A0.0269 (9)0.0224 (8)0.0219 (8)0.0020 (7)0.0054 (7)0.0025 (7)
C40.0273 (9)0.0230 (8)0.0275 (9)0.0057 (7)0.0051 (7)0.0015 (7)
C50.0221 (8)0.0304 (9)0.0286 (9)0.0043 (7)0.0033 (7)0.0025 (7)
C5A0.0206 (8)0.0205 (8)0.0251 (8)0.0016 (6)0.0003 (7)0.0015 (6)
C60.0248 (8)0.0169 (7)0.0261 (8)0.0022 (6)0.0045 (7)0.0012 (7)
C70.0322 (9)0.0173 (7)0.0209 (8)0.0030 (7)0.0016 (7)0.0002 (6)
C80.0279 (8)0.0170 (7)0.0231 (8)0.0015 (6)0.0018 (7)0.0004 (6)
C90.0216 (8)0.0207 (8)0.0230 (8)0.0005 (7)0.0013 (7)0.0001 (6)
C9A0.0211 (8)0.0184 (7)0.0188 (7)0.0001 (6)0.0010 (6)0.0019 (6)
C9B0.0251 (9)0.0206 (8)0.0199 (8)0.0018 (7)0.0019 (6)0.0027 (6)
O100.0308 (7)0.0197 (6)0.0258 (6)0.0008 (5)0.0053 (5)0.0020 (5)
C100.0463 (12)0.0327 (10)0.0348 (11)0.0077 (9)0.0000 (10)0.0097 (9)
C110.0271 (9)0.0261 (9)0.0355 (10)0.0064 (7)0.0023 (8)0.0062 (8)
C120.0230 (8)0.0204 (8)0.0208 (8)0.0017 (7)0.0022 (7)0.0003 (6)
C130.0183 (7)0.0195 (7)0.0225 (8)0.0017 (6)0.0016 (7)0.0004 (6)
C140.0196 (8)0.0200 (7)0.0248 (8)0.0011 (6)0.0004 (7)0.0002 (6)
C150.0239 (8)0.0203 (7)0.0230 (8)0.0013 (7)0.0010 (7)0.0016 (6)
C160.0261 (9)0.0261 (8)0.0212 (8)0.0014 (7)0.0011 (7)0.0007 (7)
C170.0234 (8)0.0258 (8)0.0262 (9)0.0036 (7)0.0017 (7)0.0006 (7)
Geometric parameters (Å, º) top
O1—C21.349 (2)C8—O101.452 (2)
O1—C9B1.466 (2)C8—C91.481 (2)
O2—C21.206 (2)C8—H81.0000
O3—C121.349 (2)C9—C171.341 (3)
O3—C61.4510 (19)C9—C9A1.514 (2)
O4—C121.211 (2)C9A—C9B1.527 (2)
C2—C31.508 (3)C9A—H9A1.0000
C3—C101.522 (3)C9B—H9B1.0000
C3—C3A1.533 (3)C10—H10A0.9800
C3—H31.0000C10—H10B0.9800
C3A—C41.525 (2)C10—H10C0.9800
C3A—C9B1.535 (2)C11—H11A0.9800
C3A—H3A1.0000C11—H11B0.9800
C4—C51.526 (3)C11—H11C0.9800
C4—H4A0.9900C12—C131.489 (2)
C4—H4B0.9900C13—C141.342 (2)
C5—C5A1.556 (2)C13—C151.512 (2)
C5—H5A0.9900C14—C161.496 (2)
C5—H5B0.9900C14—H140.9500
C5A—C61.537 (2)C15—H15A0.9800
C5A—C111.539 (2)C15—H15B0.9800
C5A—C9A1.557 (2)C15—H15C0.9800
C6—C71.521 (3)C16—H16A0.9800
C6—H61.0000C16—H16B0.9800
C7—O101.439 (2)C16—H16C0.9800
C7—C81.477 (3)C17—H17A0.94 (2)
C7—H71.0000C17—H17B0.97 (2)
C2—O1—C9B110.55 (14)C17—C9—C8118.92 (16)
C12—O3—C6116.01 (13)C17—C9—C9A126.23 (16)
O2—C2—O1121.42 (18)C8—C9—C9A114.83 (15)
O2—C2—C3128.94 (17)C9—C9A—C9B113.11 (14)
O1—C2—C3109.64 (16)C9—C9A—C5A110.09 (14)
C2—C3—C10113.86 (17)C9B—C9A—C5A113.57 (14)
C2—C3—C3A103.43 (14)C9—C9A—H9A106.5
C10—C3—C3A117.94 (17)C9B—C9A—H9A106.5
C2—C3—H3107.0C5A—C9A—H9A106.5
C10—C3—H3107.0O1—C9B—C9A105.92 (13)
C3A—C3—H3107.0O1—C9B—C3A106.01 (13)
C4—C3A—C3116.74 (15)C9A—C9B—C3A115.22 (14)
C4—C3A—C9B110.96 (14)O1—C9B—H9B109.8
C3—C3A—C9B101.65 (15)C9A—C9B—H9B109.8
C4—C3A—H3A109.0C3A—C9B—H9B109.8
C3—C3A—H3A109.0C7—O10—C861.44 (11)
C9B—C3A—H3A109.0C3—C10—H10A109.5
C3A—C4—C5107.78 (15)C3—C10—H10B109.5
C3A—C4—H4A110.2H10A—C10—H10B109.5
C5—C4—H4A110.2C3—C10—H10C109.5
C3A—C4—H4B110.2H10A—C10—H10C109.5
C5—C4—H4B110.2H10B—C10—H10C109.5
H4A—C4—H4B108.5C5A—C11—H11A109.5
C4—C5—C5A114.37 (16)C5A—C11—H11B109.5
C4—C5—H5A108.7H11A—C11—H11B109.5
C5A—C5—H5A108.7C5A—C11—H11C109.5
C4—C5—H5B108.7H11A—C11—H11C109.5
C5A—C5—H5B108.7H11B—C11—H11C109.5
H5A—C5—H5B107.6O4—C12—O3122.45 (16)
C6—C5A—C11107.32 (15)O4—C12—C13125.87 (16)
C6—C5A—C5109.79 (14)O3—C12—C13111.64 (14)
C11—C5A—C5109.24 (15)C14—C13—C12120.38 (15)
C6—C5A—C9A108.03 (14)C14—C13—C15121.65 (15)
C11—C5A—C9A110.64 (14)C12—C13—C15117.93 (15)
C5—C5A—C9A111.71 (14)C13—C14—C16128.49 (15)
O3—C6—C7110.69 (14)C13—C14—H14115.8
O3—C6—C5A107.57 (13)C16—C14—H14115.8
C7—C6—C5A114.02 (14)C13—C15—H15A109.5
O3—C6—H6108.1C13—C15—H15B109.5
C7—C6—H6108.1H15A—C15—H15B109.5
C5A—C6—H6108.1C13—C15—H15C109.5
O10—C7—C859.73 (11)H15A—C15—H15C109.5
O10—C7—C6116.08 (13)H15B—C15—H15C109.5
C8—C7—C6120.00 (15)C14—C16—H16A109.5
O10—C7—H7116.3C14—C16—H16B109.5
C8—C7—H7116.3H16A—C16—H16B109.5
C6—C7—H7116.3C14—C16—H16C109.5
O10—C8—C758.83 (11)H16A—C16—H16C109.5
O10—C8—C9115.17 (14)H16B—C16—H16C109.5
C7—C8—C9120.57 (16)C9—C17—H17A122.2 (13)
O10—C8—H8116.5C9—C17—H17B122.1 (14)
C7—C8—H8116.5H17A—C17—H17B115.5 (19)
C9—C8—H8116.5
C9B—O1—C2—O2172.91 (16)O10—C8—C9—C9A52.2 (2)
C9B—O1—C2—C38.26 (18)C7—C8—C9—C9A15.0 (2)
O2—C2—C3—C1028.0 (3)C17—C9—C9A—C9B1.8 (3)
O1—C2—C3—C10153.32 (16)C8—C9—C9A—C9B176.92 (15)
O2—C2—C3—C3A157.18 (18)C17—C9—C9A—C5A130.09 (19)
O1—C2—C3—C3A24.10 (18)C8—C9—C9A—C5A48.67 (19)
C2—C3—C3A—C492.11 (18)C6—C5A—C9A—C965.44 (17)
C10—C3—C3A—C434.6 (2)C11—C5A—C9A—C951.76 (19)
C2—C3—C3A—C9B28.74 (17)C5—C5A—C9A—C9173.70 (14)
C10—C3—C3A—C9B155.42 (17)C6—C5A—C9A—C9B166.57 (14)
C3—C3A—C4—C5179.07 (15)C11—C5A—C9A—C9B76.22 (19)
C9B—C3A—C4—C563.29 (19)C5—C5A—C9A—C9B45.71 (19)
C3A—C4—C5—C5A55.2 (2)C2—O1—C9B—C9A133.99 (14)
C4—C5—C5A—C6118.63 (17)C2—O1—C9B—C3A11.12 (17)
C4—C5—C5A—C11123.94 (17)C9—C9A—C9B—O178.72 (17)
C4—C5—C5A—C9A1.2 (2)C5A—C9A—C9B—O1154.87 (13)
C12—O3—C6—C775.56 (18)C9—C9A—C9B—C3A164.45 (14)
C12—O3—C6—C5A159.27 (14)C5A—C9A—C9B—C3A38.0 (2)
C11—C5A—C6—O3166.03 (14)C4—C3A—C9B—O199.98 (16)
C5—C5A—C6—O347.40 (18)C3—C3A—C9B—O124.83 (16)
C9A—C5A—C6—O374.64 (17)C4—C3A—C9B—C9A16.8 (2)
C11—C5A—C6—C770.81 (18)C3—C3A—C9B—C9A141.61 (15)
C5—C5A—C6—C7170.56 (14)C6—C7—O10—C8111.03 (17)
C9A—C5A—C6—C748.52 (18)C9—C8—O10—C7111.87 (18)
O3—C6—C7—O1036.6 (2)C6—O3—C12—O48.5 (3)
C5A—C6—C7—O1084.87 (18)C6—O3—C12—C13169.25 (15)
O3—C6—C7—C8105.14 (17)O4—C12—C13—C1416.9 (3)
C5A—C6—C7—C816.3 (2)O3—C12—C13—C14165.42 (16)
C6—C7—C8—O10104.52 (16)O4—C12—C13—C15160.91 (18)
O10—C7—C8—C9102.71 (17)O3—C12—C13—C1516.8 (2)
C6—C7—C8—C91.8 (2)C12—C13—C14—C162.7 (3)
O10—C8—C9—C17128.89 (18)C15—C13—C14—C16179.63 (18)
C7—C8—C9—C17163.85 (17)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
C3A—H3A···O4i1.002.453.353 (2)149
C5—H5B···O30.992.332.752 (2)105
C8—H8···O2ii1.002.503.176 (2)124
C9A—H9A···O31.002.583.010 (2)106
C14—H14···O10iii0.952.573.423 (2)149
C16—H16B···O40.982.452.862 (2)105
Symmetry codes: (i) x+3/2, y+1, z+1/2; (ii) x+1/2, y+1, z1/2; (iii) x+1/2, y+3/2, z+1.
Summary of short interatomic contacts (Å) in the title compound top
H15A···H16C2.39-1/2 + x, 3/2 - y, 1 - z
O2···H82.501/2 - x, 1 - y, 1/2 + z
O4···H3A2.453/2 - x, 1 - y, -1/2 + z
H8···H10A2.481 - x, -1/2 + y, 3/2 - z
H11B···H17A2.401 + x, y, z
 

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