Download citation
Download citation
link to html
The crystal structures of two new tetra­kis-substituted pyrazine compounds, 1,1′,1′′,1′′′-(pyrazine-2,3,5,6-tetra­yl)tetra­kis­(N,N-di­methyl­methanamine) and N,N′,N′′,N′′′-[pyrazine-2,3,5,6tetra­yltetra­kis­(methyl­ene)]tetra­kis­(N-methyl­aniline), and a degredation product, N,N′-[(6-phenyl-6,7-di­hydro-5H-pyrrolo­[3,4-b]pyrazine-2,3-di­yl)bis­(methyl­ene)]bis­(N-methyl­aniline), are described and have been analysed by Hirshfeld surface analysis.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S2056989020002133/xi2023sup1.cif
Contains datablocks I, II, III, Global

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S2056989020002133/xi2023Isup2.hkl
Contains datablock I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S2056989020002133/xi2023IIsup3.hkl
Contains datablock II

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S2056989020002133/xi2023IIIsup4.hkl
Contains datablock III

cml

Chemical Markup Language (CML) file https://doi.org/10.1107/S2056989020002133/xi2023IIsup5.cml
Supplementary material

cml

Chemical Markup Language (CML) file https://doi.org/10.1107/S2056989020002133/xi2023IIIsup6.cml
Supplementary material

CCDC references: 1984024; 1984023; 1984022

Key indicators

Structure: I
  • Single-crystal X-ray study
  • T = 293 K
  • Mean [sigma](C-C) = 0.003 Å
  • R factor = 0.060
  • wR factor = 0.154
  • Data-to-parameter ratio = 17.3
Structure: II
  • Single-crystal X-ray study
  • T = 293 K
  • Mean [sigma](C-C) = 0.004 Å
  • R factor = 0.049
  • wR factor = 0.108
  • Data-to-parameter ratio = 14.2
Structure: III
  • Single-crystal X-ray study
  • T = 293 K
  • Mean [sigma](C-C) = 0.004 Å
  • R factor = 0.035
  • wR factor = 0.079
  • Data-to-parameter ratio = 13.1

checkCIF/PLATON results

No syntax errors found



Datablock: I


Alert level C PLAT242_ALERT_2_C Low MainMol Ueq as Compared to Neighbors of N2 Check PLAT242_ALERT_2_C Low MainMol Ueq as Compared to Neighbors of N3 Check PLAT906_ALERT_3_C Large K Value in the Analysis of Variance ...... 4.770 Check PLAT978_ALERT_2_C Number C-C Bonds with Positive Residual Density. 0 Info
Alert level G PLAT199_ALERT_1_G Reported _cell_measurement_temperature ..... (K) 293 Check PLAT200_ALERT_1_G Reported _diffrn_ambient_temperature ..... (K) 293 Check
0 ALERT level A = Most likely a serious problem - resolve or explain 0 ALERT level B = A potentially serious problem, consider carefully 4 ALERT level C = Check. Ensure it is not caused by an omission or oversight 2 ALERT level G = General information/check it is not something unexpected 2 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 3 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
Datablock: II
Alert level C PLAT717_ALERT_1_C D...A Unknown or Inconsistent Label .......... C<I>G</I> Check PLAT906_ALERT_3_C Large K Value in the Analysis of Variance ...... 3.892 Check PLAT978_ALERT_2_C Number C-C Bonds with Positive Residual Density. 0 Info
Alert level G PLAT012_ALERT_1_G N.O.K. _shelx_res_checksum Found in CIF ...... Please Check PLAT199_ALERT_1_G Reported _cell_measurement_temperature ..... (K) 293 Check PLAT200_ALERT_1_G Reported _diffrn_ambient_temperature ..... (K) 293 Check
0 ALERT level A = Most likely a serious problem - resolve or explain 0 ALERT level B = A potentially serious problem, consider carefully 3 ALERT level C = Check. Ensure it is not caused by an omission or oversight 3 ALERT level G = General information/check it is not something unexpected 4 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
Datablock: III

Alert level A PLAT029_ALERT_3_A _diffrn_measured_fraction_theta_full value Low . 0.939 Why?
Author Response: With the STOE IPDS I, one-circle diffractometer, for the triclinic system often only 93% of the Ewald sphere is accessible.

Alert level B PLAT026_ALERT_3_B Ratio Observed / Unique Reflections (too) Low .. 38% Check PLAT911_ALERT_3_B Missing FCF Refl Between Thmin & STh/L= 0.600 255 Report
Alert level C GOODF01_ALERT_2_C The least squares goodness of fit parameter lies outside the range 0.80 <> 2.00 Goodness of fit given = 0.682 PLAT230_ALERT_2_C Hirshfeld Test Diff for C18 --C19 . 6.0 s.u. PLAT410_ALERT_2_C Short Intra H...H Contact H21A ..H23 . 1.98 Ang. x,y,z = 1_555 Check PLAT906_ALERT_3_C Large K Value in the Analysis of Variance ...... 25.883 Check PLAT906_ALERT_3_C Large K Value in the Analysis of Variance ...... 3.912 Check PLAT978_ALERT_2_C Number C-C Bonds with Positive Residual Density. 0 Info
Alert level G PLAT154_ALERT_1_G The s.u.'s on the Cell Angles are Equal ..(Note) 0.013 Degree PLAT199_ALERT_1_G Reported _cell_measurement_temperature ..... (K) 293 Check PLAT200_ALERT_1_G Reported _diffrn_ambient_temperature ..... (K) 293 Check PLAT910_ALERT_3_G Missing # of FCF Reflection(s) Below Theta(Min). 1 Note PLAT913_ALERT_3_G Missing # of Very Strong Reflections in FCF .... 2 Note PLAT961_ALERT_5_G Dataset Contains no Negative Intensities ....... Please Check
1 ALERT level A = Most likely a serious problem - resolve or explain 2 ALERT level B = A potentially serious problem, consider carefully 6 ALERT level C = Check. Ensure it is not caused by an omission or oversight 6 ALERT level G = General information/check it is not something unexpected 3 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 4 ALERT type 2 Indicator that the structure model may be wrong or deficient 7 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 1 ALERT type 5 Informative message, check

Computing details top

Data collection: STADI4 (Stoe & Cie, 1997) for (I), (II); EXPOSE in IPDS-I (Stoe & Cie, 2004) for (III). Cell refinement: STADI4 (Stoe & Cie, 1997) for (I), (II); CELL in IPDS-I (Stoe & Cie, 2004) for (III). Data reduction: X-RED (Stoe & Cie, 1997) for (I), (II); INTEGRATE in IPDS-I (Stoe & Cie, 2004) for (III). For all structures, program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL2018/3 (Sheldrick, 2015); molecular graphics: Mercury (Macrae et al., 2020); software used to prepare material for publication: SHELXL2018/3 (Sheldrick, 2015), PLATON (Spek, 2020) and publCIF (Westrip, 2010).

1,1',1'',1'''-(Pyrazine-2,3,5,6-tetrayl)tetrakis(N,N-dimethylmethanamine) (I) top
Crystal data top
C16H32N6F(000) = 340
Mr = 308.47Dx = 1.045 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
a = 9.7577 (14) ÅCell parameters from 22 reflections
b = 10.348 (2) Åθ = 12.6–18.1°
c = 9.9118 (16) ŵ = 0.07 mm1
β = 101.663 (15)°T = 293 K
V = 980.2 (3) Å3Block, colourless
Z = 20.53 × 0.53 × 0.26 mm
Data collection top
Stoe–Siemens AED2, 4-circle
diffractometer
Rint = 0.055
Radiation source: fine-focus sealed tubeθmax = 25.5°, θmin = 2.7°
Plane graphite monochromatorh = 1111
ω/\2q scansk = 012
3347 measured reflectionsl = 1111
1818 independent reflections2 standard reflections every 60 min
1111 reflections with I > 2σ(I) intensity decay: 1%
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.060H-atom parameters constrained
wR(F2) = 0.154 w = 1/[σ2(Fo2) + (0.0488P)2 + 0.2847P]
where P = (Fo2 + 2Fc2)/3
S = 1.10(Δ/σ)max < 0.001
1818 reflectionsΔρmax = 0.15 e Å3
105 parametersΔρmin = 0.12 e Å3
0 restraintsExtinction correction: (SHELXL2018/3; Sheldrick, 2015), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.043 (7)
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
N10.07379 (18)0.10665 (19)0.46684 (19)0.0504 (5)
N20.2065 (2)0.0663 (2)0.2414 (2)0.0657 (7)
N30.1836 (2)0.1754 (2)0.8033 (2)0.0699 (7)
C10.0393 (2)0.0085 (2)0.3779 (2)0.0465 (6)
C20.0345 (2)0.0981 (2)0.5885 (2)0.0476 (6)
C30.0864 (3)0.0171 (3)0.2426 (2)0.0576 (7)
H3A0.0099710.0080610.1685670.069*
H3B0.1111310.1057460.2266630.069*
C40.2207 (4)0.0957 (4)0.1004 (3)0.1046 (12)
H4A0.2345450.0169580.0537520.157*
H4B0.1372430.1376980.0523950.157*
H4C0.2995130.1517130.1027100.157*
C50.3335 (3)0.0092 (4)0.3188 (3)0.0979 (12)
H5C0.4098620.0682970.3219750.147*
H5B0.3220270.0090640.4108920.147*
H5A0.3528580.0696240.2751330.147*
C60.0739 (3)0.2095 (2)0.6863 (3)0.0615 (7)
H6A0.1053480.2811270.6372890.074*
H6B0.0082030.2376560.7195050.074*
C70.3174 (3)0.1604 (4)0.7623 (4)0.1168 (15)
H7A0.3465080.2420540.7317870.175*
H7B0.3082880.0987090.6886860.175*
H7C0.3860120.1303480.8394650.175*
C80.1949 (4)0.2720 (3)0.9118 (3)0.1000 (12)
H8A0.1078520.2771660.9425470.150*
H8B0.2159250.3545600.8767070.150*
H8C0.2682550.2480050.9875900.150*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N10.0471 (11)0.0513 (12)0.0535 (12)0.0003 (9)0.0121 (9)0.0005 (10)
N20.0654 (14)0.0752 (16)0.0629 (14)0.0117 (12)0.0279 (11)0.0066 (12)
N30.0630 (14)0.0758 (16)0.0663 (14)0.0068 (12)0.0021 (11)0.0189 (12)
C10.0433 (12)0.0490 (14)0.0465 (13)0.0037 (11)0.0076 (10)0.0006 (12)
C20.0420 (12)0.0478 (14)0.0522 (14)0.0030 (11)0.0076 (10)0.0032 (11)
C30.0597 (15)0.0629 (17)0.0520 (14)0.0059 (13)0.0152 (12)0.0041 (12)
C40.130 (3)0.117 (3)0.081 (2)0.032 (2)0.056 (2)0.002 (2)
C50.0565 (17)0.145 (3)0.096 (2)0.001 (2)0.0259 (17)0.019 (2)
C60.0660 (17)0.0529 (15)0.0666 (16)0.0012 (13)0.0157 (13)0.0089 (13)
C70.060 (2)0.154 (4)0.131 (3)0.008 (2)0.0089 (19)0.058 (3)
C80.105 (3)0.111 (3)0.078 (2)0.022 (2)0.0064 (19)0.037 (2)
Geometric parameters (Å, º) top
N1—C21.340 (3)C4—H4B0.9600
N1—C11.342 (3)C4—H4C0.9600
N2—C51.446 (4)C5—H5C0.9600
N2—C31.457 (3)C5—H5B0.9600
N2—C41.463 (3)C5—H5A0.9600
N3—C71.452 (4)C6—H6A0.9700
N3—C61.454 (3)C6—H6B0.9700
N3—C81.456 (3)C7—H7A0.9600
C1—C2i1.394 (3)C7—H7B0.9600
C1—C31.506 (3)C7—H7C0.9600
C2—C61.505 (3)C8—H8A0.9600
C3—H3A0.9700C8—H8B0.9600
C3—H3B0.9700C8—H8C0.9600
C4—H4A0.9600
C2—N1—C1117.5 (2)N2—C5—H5C109.5
C5—N2—C3111.0 (2)N2—C5—H5B109.5
C5—N2—C4110.8 (2)H5C—C5—H5B109.5
C3—N2—C4111.3 (2)N2—C5—H5A109.5
C7—N3—C6111.2 (2)H5C—C5—H5A109.5
C7—N3—C8110.0 (2)H5B—C5—H5A109.5
C6—N3—C8110.9 (2)N3—C6—C2112.3 (2)
N1—C1—C2i121.0 (2)N3—C6—H6A109.1
N1—C1—C3117.3 (2)C2—C6—H6A109.1
C2i—C1—C3121.7 (2)N3—C6—H6B109.1
N1—C2—C1i121.5 (2)C2—C6—H6B109.1
N1—C2—C6116.5 (2)H6A—C6—H6B107.9
C1i—C2—C6121.9 (2)N3—C7—H7A109.5
N2—C3—C1111.3 (2)N3—C7—H7B109.5
N2—C3—H3A109.4H7A—C7—H7B109.5
C1—C3—H3A109.4N3—C7—H7C109.5
N2—C3—H3B109.4H7A—C7—H7C109.5
C1—C3—H3B109.4H7B—C7—H7C109.5
H3A—C3—H3B108.0N3—C8—H8A109.5
N2—C4—H4A109.5N3—C8—H8B109.5
N2—C4—H4B109.5H8A—C8—H8B109.5
H4A—C4—H4B109.5N3—C8—H8C109.5
N2—C4—H4C109.5H8A—C8—H8C109.5
H4A—C4—H4C109.5H8B—C8—H8C109.5
H4B—C4—H4C109.5
C2—N1—C1—C2i0.1 (3)N1—C1—C3—N2103.4 (2)
C2—N1—C1—C3178.68 (19)C2i—C1—C3—N275.2 (3)
C1—N1—C2—C1i0.1 (3)C7—N3—C6—C271.6 (3)
C1—N1—C2—C6179.79 (19)C8—N3—C6—C2165.7 (2)
C5—N2—C3—C177.0 (3)N1—C2—C6—N3108.7 (2)
C4—N2—C3—C1159.1 (2)C1i—C2—C6—N371.4 (3)
Symmetry code: (i) x, y, z+1.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
C3—H3A···N3i0.972.623.261 (4)124
Symmetry code: (i) x, y, z+1.
N,N',N'',N'''-[Pyrazine-2,3,5,6\ tetrayltetrakis(methylene)]tetrakis(N-methylaniline) (II) top
Crystal data top
C36H40N6Z = 1
Mr = 556.74F(000) = 298
Triclinic, P1Dx = 1.251 Mg m3
a = 8.6753 (10) ÅMo Kα radiation, λ = 0.71073 Å
b = 8.9160 (11) ÅCell parameters from 28 reflections
c = 10.0631 (10) Åθ = 12.5–17.6°
α = 85.774 (10)°µ = 0.08 mm1
β = 73.468 (11)°T = 293 K
γ = 82.467 (11)°Block, pale-greenish-yellow
V = 739.21 (15) Å30.38 × 0.30 × 0.27 mm
Data collection top
Stoe–Siemens AED2, 4-circle
diffractometer
Rint = 0.031
Radiation source: fine-focus sealed tubeθmax = 25.5°, θmin = 2.1°
Plane graphite monochromatorh = 910
ω/\2q scansk = 1010
5354 measured reflectionsl = 1212
2741 independent reflections2 standard reflections every 60 min
1913 reflections with I > 2σ(I) intensity decay: 1%
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.049H-atom parameters constrained
wR(F2) = 0.108 w = 1/[σ2(Fo2) + (0.0254P)2 + 0.254P]
where P = (Fo2 + 2Fc2)/3
S = 1.12(Δ/σ)max < 0.001
2741 reflectionsΔρmax = 0.13 e Å3
193 parametersΔρmin = 0.14 e Å3
0 restraintsExtinction correction: (SHELXL2018/3; Sheldrick 2015), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.026 (3)
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
N10.46201 (19)0.59971 (18)0.89913 (16)0.0393 (4)
N20.5739 (2)0.31235 (19)0.66461 (17)0.0454 (4)
N30.2493 (2)0.85914 (19)0.95305 (17)0.0481 (5)
C10.5585 (2)0.4702 (2)0.86471 (19)0.0366 (5)
C20.4027 (2)0.6301 (2)1.0334 (2)0.0378 (5)
C30.6246 (2)0.4442 (2)0.7110 (2)0.0437 (5)
H3A0.5908180.5334440.6605080.052*
H3B0.7418790.4330340.6872570.052*
C40.4248 (3)0.3268 (2)0.63526 (19)0.0429 (5)
C50.3070 (3)0.4493 (3)0.6795 (2)0.0502 (6)
H50.3286370.5245820.7286040.060*
C60.1604 (3)0.4603 (3)0.6515 (2)0.0619 (7)
H60.0839830.5427940.6822240.074*
C70.1237 (3)0.3508 (3)0.5785 (3)0.0674 (7)
H70.0241390.3591850.5592880.081*
C80.2367 (3)0.2306 (3)0.5354 (3)0.0661 (7)
H80.2129660.1558800.4869850.079*
C90.3863 (3)0.2167 (2)0.5618 (2)0.0549 (6)
H90.4616010.1336650.5304810.066*
C100.7008 (3)0.2013 (3)0.5894 (3)0.0645 (7)
H10A0.7994060.2088320.6125830.097*
H10B0.7174710.2203960.4914340.097*
H10C0.6693450.1015220.6144010.097*
C110.2938 (3)0.7782 (2)1.0686 (2)0.0488 (6)
H11A0.1956860.7569711.1389340.059*
H11B0.3483950.8436001.1086030.059*
C120.1177 (2)0.8292 (2)0.9122 (2)0.0431 (5)
C130.0121 (3)0.7258 (3)0.9845 (2)0.0586 (6)
H130.0328490.6710201.0610370.070*
C140.1220 (3)0.7040 (3)0.9440 (3)0.0697 (7)
H140.1911440.6359930.9949960.084*
C150.1562 (3)0.7802 (3)0.8302 (3)0.0690 (7)
H150.2470730.7650060.8035640.083*
C160.0517 (3)0.8795 (3)0.7571 (3)0.0643 (7)
H160.0721290.9311900.6790590.077*
C170.0822 (3)0.9052 (2)0.7956 (2)0.0516 (6)
H170.1499600.9737160.7437060.062*
C180.3667 (3)0.9499 (3)0.8637 (3)0.0633 (7)
H18A0.4070360.9067720.7740330.095*
H18B0.4547750.9522130.9033520.095*
H18C0.3162861.0511470.8544970.095*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N10.0443 (10)0.0408 (10)0.0350 (9)0.0041 (8)0.0144 (7)0.0032 (7)
N20.0498 (11)0.0481 (10)0.0390 (10)0.0057 (8)0.0163 (8)0.0112 (8)
N30.0541 (11)0.0469 (11)0.0455 (10)0.0000 (9)0.0210 (9)0.0016 (8)
C10.0371 (11)0.0405 (11)0.0347 (11)0.0066 (9)0.0126 (9)0.0044 (9)
C20.0400 (11)0.0397 (11)0.0366 (11)0.0044 (9)0.0147 (9)0.0040 (9)
C30.0454 (12)0.0489 (12)0.0360 (11)0.0029 (10)0.0106 (9)0.0039 (9)
C40.0523 (13)0.0451 (12)0.0314 (11)0.0027 (10)0.0142 (9)0.0021 (9)
C50.0551 (14)0.0576 (14)0.0379 (12)0.0042 (11)0.0159 (10)0.0098 (10)
C60.0490 (14)0.0793 (18)0.0521 (14)0.0084 (13)0.0120 (11)0.0046 (13)
C70.0535 (15)0.090 (2)0.0637 (16)0.0169 (14)0.0239 (13)0.0119 (15)
C80.0831 (19)0.0582 (16)0.0719 (17)0.0206 (14)0.0412 (15)0.0038 (13)
C90.0747 (16)0.0424 (13)0.0524 (14)0.0010 (11)0.0275 (12)0.0030 (10)
C100.0631 (16)0.0667 (16)0.0613 (15)0.0207 (13)0.0210 (12)0.0223 (13)
C110.0574 (14)0.0506 (13)0.0406 (12)0.0052 (10)0.0210 (10)0.0074 (10)
C120.0464 (12)0.0381 (11)0.0429 (12)0.0086 (9)0.0140 (10)0.0078 (9)
C130.0673 (16)0.0563 (15)0.0519 (14)0.0083 (12)0.0173 (12)0.0048 (11)
C140.0597 (16)0.0732 (18)0.0723 (18)0.0179 (13)0.0071 (14)0.0057 (14)
C150.0550 (15)0.0744 (18)0.083 (2)0.0020 (14)0.0280 (14)0.0203 (15)
C160.0704 (17)0.0633 (16)0.0654 (16)0.0085 (13)0.0356 (14)0.0040 (13)
C170.0555 (14)0.0492 (13)0.0509 (13)0.0012 (11)0.0196 (11)0.0026 (10)
C180.0677 (16)0.0617 (15)0.0676 (16)0.0143 (13)0.0287 (13)0.0036 (13)
Geometric parameters (Å, º) top
N1—C21.336 (2)C8—H80.9300
N1—C11.339 (2)C9—H90.9300
N2—C41.395 (3)C10—H10A0.9600
N2—C101.454 (3)C10—H10B0.9600
N2—C31.459 (3)C10—H10C0.9600
N3—C121.382 (3)C11—H11A0.9700
N3—C111.442 (2)C11—H11B0.9700
N3—C181.445 (3)C12—C131.400 (3)
C1—C2i1.395 (3)C12—C171.401 (3)
C1—C31.512 (3)C13—C141.378 (3)
C2—C111.521 (3)C13—H130.9300
C3—H3A0.9700C14—C151.374 (4)
C3—H3B0.9700C14—H140.9300
C4—C91.398 (3)C15—C161.371 (4)
C4—C51.398 (3)C15—H150.9300
C5—C61.369 (3)C16—C171.375 (3)
C5—H50.9300C16—H160.9300
C6—C71.384 (3)C17—H170.9300
C6—H60.9300C18—H18A0.9600
C7—C81.359 (4)C18—H18B0.9600
C7—H70.9300C18—H18C0.9600
C8—C91.386 (3)
C2—N1—C1118.46 (16)C7—C8—C9121.7 (2)
C4—N2—C10117.64 (17)C7—C8—H8119.2
C4—N2—C3118.71 (16)C9—C8—H8119.2
C10—N2—C3117.17 (18)C8—C9—C4120.4 (2)
C12—N3—C11122.00 (18)C8—C9—H9119.8
C12—N3—C18120.07 (17)C4—C9—H9119.8
C11—N3—C18116.70 (18)N3—C12—C13122.77 (19)
N1—C1—C2i120.79 (16)N3—C12—C17120.5 (2)
N1—C1—C3115.85 (16)C13—C12—C17116.7 (2)
C2i—C1—C3123.33 (17)C14—C13—C12121.0 (2)
N1—C2—C1i120.74 (17)C14—C13—H13119.5
N1—C2—C11117.03 (17)C12—C13—H13119.5
C1i—C2—C11122.23 (17)C15—C14—C13121.6 (2)
N2—C3—C1114.84 (17)C15—C14—H14119.2
N2—C3—H3A108.6C13—C14—H14119.2
C1—C3—H3A108.6C16—C15—C14117.7 (2)
N2—C3—H3B108.6C16—C15—H15121.1
C1—C3—H3B108.6C14—C15—H15121.1
H3A—C3—H3B107.5C15—C16—C17122.1 (2)
N3—C11—C2115.02 (17)C15—C16—H16119.0
N3—C11—H11A108.5C17—C16—H16119.0
C2—C11—H11A108.5C16—C17—C12120.8 (2)
N3—C11—H11B108.5C16—C17—H17119.6
C2—C11—H11B108.5C12—C17—H17119.6
H11A—C11—H11B107.5N3—C18—H18A109.5
N2—C4—C9120.81 (19)N3—C18—H18B109.5
N2—C4—C5121.91 (19)H18A—C18—H18B109.5
C9—C4—C5117.3 (2)N3—C18—H18C109.5
C6—C5—C4121.1 (2)H18A—C18—H18C109.5
C6—C5—H5119.5H18B—C18—H18C109.5
C4—C5—H5119.5N2—C10—H10A109.5
C5—C6—C7121.2 (2)N2—C10—H10B109.5
C5—C6—H6119.4H10A—C10—H10B109.5
C7—C6—H6119.4N2—C10—H10C109.5
C8—C7—C6118.4 (2)H10A—C10—H10C109.5
C8—C7—H7120.8H10B—C10—H10C109.5
C6—C7—H7120.8
C2—N1—C1—C2i0.5 (3)C4—C5—C6—C70.1 (4)
C2—N1—C1—C3178.66 (17)C5—C6—C7—C80.4 (4)
C1—N1—C2—C1i0.5 (3)C6—C7—C8—C90.6 (4)
C1—N1—C2—C11179.92 (17)C7—C8—C9—C40.5 (4)
C4—N2—C3—C183.8 (2)N2—C4—C9—C8178.8 (2)
C10—N2—C3—C1125.0 (2)C5—C4—C9—C80.2 (3)
N1—C1—C3—N2117.34 (19)C11—N3—C12—C134.2 (3)
C2i—C1—C3—N264.5 (2)C18—N3—C12—C13171.1 (2)
C12—N3—C11—C286.2 (2)C11—N3—C12—C17177.13 (19)
C18—N3—C11—C281.1 (2)C18—N3—C12—C1710.2 (3)
N1—C2—C11—N38.2 (3)N3—C12—C13—C14177.1 (2)
C1i—C2—C11—N3172.42 (18)C17—C12—C13—C141.7 (3)
C10—N2—C4—C914.5 (3)C12—C13—C14—C151.2 (4)
C3—N2—C4—C9165.50 (19)C13—C14—C15—C160.1 (4)
C10—N2—C4—C5166.6 (2)C14—C15—C16—C170.8 (4)
C3—N2—C4—C515.6 (3)C15—C16—C17—C120.3 (4)
N2—C4—C5—C6178.9 (2)N3—C12—C17—C16177.8 (2)
C9—C4—C5—C60.0 (3)C13—C12—C17—C161.0 (3)
Symmetry code: (i) x+1, y+1, z+2.
Hydrogen-bond geometry (Å, º) top
Cg2 and Cg3 are the centroids of rings C4–C9 and C12–C17, respectively.
D—H···AD—HH···AD···AD—H···A
C5—H5···N10.932.503.331 (3)149
C6—H6···Cg30.932.993.804 (3)147
C3—H3A···Cg2ii0.972.833.561 (2)133
Symmetry code: (ii) x+1, y+1, z+1.
N,N'-[(6-Phenyl-6,7-dihydro-5H-pyrrolo[3,4-\ b]pyrazine-2,3-diyl)bis(methylene)]bis(N-methylaniline) (III) top
Crystal data top
C28H29N5Z = 2
Mr = 435.56F(000) = 464
Triclinic, P1Dx = 1.247 Mg m3
a = 8.686 (1) ÅMo Kα radiation, λ = 0.71073 Å
b = 9.7731 (11) ÅCell parameters from 5000 reflections
c = 14.3948 (16) Åθ = 1.7–26.1°
α = 85.915 (13)°µ = 0.08 mm1
β = 75.349 (13)°T = 293 K
γ = 78.891 (13)°Hexagonal plate, pale yellow
V = 1159.8 (2) Å30.45 × 0.35 × 0.10 mm
Data collection top
Stoe IPDS 1
diffractometer
1518 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.051
Plane graphite monochromatorθmax = 25.3°, θmin = 2.1°
φ rotation scansh = 1010
8653 measured reflectionsk = 1111
3953 independent reflectionsl = 1717
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.035H-atom parameters constrained
wR(F2) = 0.079 w = 1/[σ2(Fo2) + (0.0308P)2]
where P = (Fo2 + 2Fc2)/3
S = 0.68(Δ/σ)max < 0.001
3953 reflectionsΔρmax = 0.12 e Å3
301 parametersΔρmin = 0.12 e Å3
0 restraintsExtinction correction: (SHELXL2018/3; Sheldrick, 2015), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0154 (11)
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
N10.4060 (2)0.8786 (2)0.20916 (11)0.0559 (5)
N20.2666 (2)0.9790 (2)0.05437 (12)0.0596 (6)
N30.5915 (2)0.6863 (2)0.00687 (11)0.0641 (6)
N40.0765 (2)1.1354 (2)0.19845 (12)0.0567 (5)
N50.2256 (2)0.9508 (2)0.39598 (12)0.0607 (6)
C10.2797 (3)0.9865 (2)0.21849 (14)0.0536 (6)
C20.4566 (2)0.8223 (2)0.12258 (14)0.0510 (6)
C30.3862 (3)0.8699 (3)0.04787 (13)0.0522 (6)
C40.2133 (2)1.0385 (2)0.14142 (15)0.0550 (6)
C50.5911 (3)0.7029 (2)0.09341 (13)0.0611 (7)
H5A0.6929530.7242260.0988420.073*
H5B0.5701130.6197430.1317380.073*
C60.4643 (2)0.7825 (2)0.03875 (13)0.0577 (7)
H6A0.3882740.7333190.0552100.069*
H6B0.5085920.8387260.0936820.069*
C70.6870 (3)0.5773 (3)0.06142 (15)0.0559 (6)
C80.8004 (3)0.4812 (3)0.02614 (15)0.0620 (7)
H80.8108940.4894350.0358320.074*
C90.8976 (3)0.3735 (3)0.08282 (17)0.0725 (8)
H90.9725060.3098930.0582150.087*
C100.8853 (3)0.3590 (3)0.17452 (19)0.0773 (8)
H100.9515630.2865670.2120660.093*
C110.7738 (3)0.4528 (3)0.21026 (16)0.0764 (8)
H110.7647760.4435270.2724100.092*
C120.6751 (3)0.5608 (3)0.15511 (15)0.0665 (7)
H120.5998990.6231640.1803670.080*
C130.2210 (3)1.0516 (2)0.31746 (14)0.0602 (7)
H13A0.2876581.1190630.3212360.072*
H13B0.1107581.1014540.3247800.072*
C140.1121 (3)0.8654 (3)0.42226 (14)0.0560 (6)
C150.0211 (3)0.8838 (3)0.38231 (15)0.0629 (7)
H150.0325020.9535510.3358420.076*
C160.1360 (3)0.8000 (3)0.41067 (19)0.0781 (8)
H160.2244040.8146560.3834650.094*
C170.1225 (4)0.6956 (3)0.4781 (2)0.0906 (9)
H170.1996300.6384720.4963650.109*
C180.0080 (5)0.6771 (3)0.51850 (19)0.0919 (10)
H180.0175610.6073460.5652180.110*
C190.1240 (3)0.7587 (3)0.49158 (17)0.0713 (8)
H190.2114260.7432060.5196030.086*
C200.3718 (3)0.9195 (3)0.43102 (17)0.0861 (9)
H20A0.4356850.9906270.4085680.129*
H20B0.4332100.8307630.4076650.129*
H20C0.3431730.9163590.4999730.129*
C210.0812 (3)1.1664 (2)0.14886 (15)0.0651 (7)
H21A0.1065501.2377900.1830890.078*
H21B0.0776621.2029140.0848400.078*
C220.1951 (3)1.2457 (3)0.24527 (14)0.0534 (6)
C230.1678 (3)1.3796 (3)0.24765 (15)0.0688 (7)
H230.0691341.4020280.2138890.083*
C240.2859 (4)1.4813 (3)0.29992 (19)0.0860 (9)
H240.2648071.5708610.3011920.103*
C250.4332 (4)1.4517 (4)0.34971 (19)0.0920 (11)
H250.5115671.5196980.3852880.110*
C260.4620 (3)1.3199 (4)0.34573 (18)0.0911 (10)
H260.5621131.2990000.3780990.109*
C270.3461 (3)1.2173 (3)0.29485 (16)0.0719 (8)
H270.3687661.1283930.2935590.086*
C280.1287 (3)1.0303 (3)0.15362 (17)0.0805 (8)
H28A0.2002920.9833590.2015930.121*
H28B0.0361120.9639500.1230960.121*
H28C0.1843521.0739960.1064620.121*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N10.0524 (11)0.0660 (15)0.0465 (11)0.0088 (11)0.0077 (9)0.0042 (9)
N20.0533 (12)0.0728 (15)0.0465 (11)0.0058 (11)0.0064 (9)0.0024 (10)
N30.0620 (12)0.0785 (16)0.0446 (11)0.0103 (12)0.0146 (9)0.0111 (10)
N40.0522 (12)0.0551 (14)0.0605 (11)0.0069 (11)0.0106 (10)0.0064 (10)
N50.0562 (13)0.0813 (17)0.0459 (11)0.0163 (12)0.0104 (10)0.0081 (10)
C10.0503 (14)0.0603 (18)0.0468 (13)0.0137 (13)0.0020 (11)0.0047 (11)
C20.0461 (13)0.0629 (17)0.0413 (13)0.0085 (13)0.0070 (11)0.0013 (12)
C30.0469 (13)0.0650 (17)0.0419 (13)0.0106 (13)0.0056 (11)0.0000 (12)
C40.0498 (14)0.0601 (17)0.0505 (14)0.0082 (13)0.0063 (12)0.0022 (12)
C50.0567 (14)0.0749 (19)0.0467 (13)0.0009 (14)0.0100 (11)0.0089 (12)
C60.0524 (14)0.0736 (18)0.0449 (12)0.0084 (13)0.0094 (11)0.0039 (12)
C70.0486 (14)0.0627 (18)0.0532 (14)0.0095 (14)0.0052 (11)0.0076 (12)
C80.0555 (14)0.0709 (19)0.0563 (14)0.0066 (15)0.0098 (12)0.0068 (13)
C90.0645 (17)0.069 (2)0.0777 (18)0.0034 (15)0.0112 (14)0.0085 (15)
C100.0739 (19)0.074 (2)0.0766 (18)0.0108 (17)0.0001 (15)0.0247 (15)
C110.0800 (19)0.088 (2)0.0597 (15)0.0135 (18)0.0103 (14)0.0186 (15)
C120.0623 (16)0.080 (2)0.0562 (15)0.0069 (15)0.0135 (12)0.0119 (13)
C130.0618 (16)0.0653 (18)0.0513 (13)0.0143 (13)0.0053 (11)0.0109 (13)
C140.0589 (16)0.0647 (19)0.0397 (13)0.0072 (15)0.0032 (12)0.0143 (12)
C150.0598 (16)0.074 (2)0.0540 (14)0.0175 (15)0.0057 (13)0.0109 (13)
C160.070 (2)0.085 (2)0.0761 (18)0.0172 (18)0.0039 (15)0.0237 (17)
C170.092 (2)0.079 (3)0.092 (2)0.039 (2)0.0180 (18)0.0243 (19)
C180.127 (3)0.069 (2)0.0706 (19)0.018 (2)0.006 (2)0.0067 (15)
C190.086 (2)0.064 (2)0.0615 (16)0.0086 (17)0.0154 (14)0.0066 (14)
C200.0670 (17)0.122 (3)0.0789 (17)0.0167 (17)0.0316 (14)0.0145 (16)
C210.0603 (16)0.0617 (19)0.0639 (14)0.0040 (14)0.0043 (12)0.0023 (13)
C220.0536 (16)0.0608 (19)0.0442 (12)0.0012 (14)0.0162 (11)0.0003 (12)
C230.0726 (17)0.061 (2)0.0673 (16)0.0041 (17)0.0117 (13)0.0061 (14)
C240.100 (2)0.065 (2)0.0893 (19)0.0040 (19)0.0269 (18)0.0202 (16)
C250.081 (2)0.110 (3)0.0742 (19)0.019 (2)0.0162 (17)0.0368 (19)
C260.0629 (18)0.121 (3)0.0784 (19)0.003 (2)0.0059 (14)0.0256 (19)
C270.0598 (16)0.080 (2)0.0711 (15)0.0083 (16)0.0100 (14)0.0066 (14)
C280.0687 (17)0.086 (2)0.0927 (18)0.0024 (16)0.0318 (15)0.0313 (16)
Geometric parameters (Å, º) top
N1—C21.333 (2)C12—H120.9300
N1—C11.354 (2)C13—H13A0.9700
N2—C31.328 (2)C13—H13B0.9700
N2—C41.352 (2)C14—C151.394 (3)
N3—C71.374 (2)C14—C191.398 (3)
N3—C61.453 (2)C15—C161.376 (3)
N3—C51.463 (2)C15—H150.9300
N4—C221.415 (3)C16—C171.367 (4)
N4—C281.449 (3)C16—H160.9300
N4—C211.453 (3)C17—C181.376 (4)
N5—C141.376 (3)C17—H170.9300
N5—C131.449 (3)C18—C191.367 (4)
N5—C201.454 (3)C18—H180.9300
C1—C41.397 (3)C19—H190.9300
C1—C131.527 (3)C20—H20A0.9600
C2—C31.377 (2)C20—H20B0.9600
C2—C51.483 (3)C20—H20C0.9600
C3—C61.498 (3)C21—H21A0.9700
C4—C211.515 (3)C21—H21B0.9700
C5—H5A0.9700C22—C231.378 (3)
C5—H5B0.9700C22—C271.395 (3)
C6—H6A0.9700C23—C241.390 (3)
C6—H6B0.9700C23—H230.9300
C7—C81.392 (3)C24—C251.373 (4)
C7—C121.401 (3)C24—H240.9300
C8—C91.385 (3)C25—C261.366 (4)
C8—H80.9300C25—H250.9300
C9—C101.370 (3)C26—C271.378 (3)
C9—H90.9300C26—H260.9300
C10—C111.373 (3)C27—H270.9300
C10—H100.9300C28—H28A0.9600
C11—C121.380 (3)C28—H28B0.9600
C11—H110.9300C28—H28C0.9600
C2—N1—C1114.96 (16)C1—C13—H13B108.9
C3—N2—C4115.23 (17)H13A—C13—H13B107.7
C7—N3—C6122.57 (16)N5—C14—C15121.3 (2)
C7—N3—C5123.11 (17)N5—C14—C19121.3 (2)
C6—N3—C5113.64 (16)C15—C14—C19117.3 (3)
C22—N4—C28118.35 (19)C16—C15—C14120.9 (3)
C22—N4—C21117.9 (2)C16—C15—H15119.5
C28—N4—C21114.48 (18)C14—C15—H15119.5
C14—N5—C13120.75 (19)C17—C16—C15121.1 (3)
C14—N5—C20119.8 (2)C17—C16—H16119.4
C13—N5—C20117.9 (2)C15—C16—H16119.4
N1—C1—C4122.07 (18)C16—C17—C18118.5 (3)
N1—C1—C13115.34 (18)C16—C17—H17120.8
C4—C1—C13122.5 (2)C18—C17—H17120.8
N1—C2—C3122.80 (19)C19—C18—C17121.6 (3)
N1—C2—C5125.96 (18)C19—C18—H18119.2
C3—C2—C5111.24 (18)C17—C18—H18119.2
N2—C3—C2123.17 (19)C18—C19—C14120.6 (3)
N2—C3—C6126.31 (18)C18—C19—H19119.7
C2—C3—C6110.52 (19)C14—C19—H19119.7
N2—C4—C1121.65 (19)N5—C20—H20A109.5
N2—C4—C21115.81 (19)N5—C20—H20B109.5
C1—C4—C21122.52 (19)H20A—C20—H20B109.5
N3—C5—C2102.26 (16)N5—C20—H20C109.5
N3—C5—H5A111.3H20A—C20—H20C109.5
C2—C5—H5A111.3H20B—C20—H20C109.5
N3—C5—H5B111.3N4—C21—C4112.0 (2)
C2—C5—H5B111.3N4—C21—H21A109.2
H5A—C5—H5B109.2C4—C21—H21A109.2
N3—C6—C3102.22 (16)N4—C21—H21B109.2
N3—C6—H6A111.3C4—C21—H21B109.2
C3—C6—H6A111.3H21A—C21—H21B107.9
N3—C6—H6B111.3C23—C22—C27117.8 (2)
C3—C6—H6B111.3C23—C22—N4123.5 (2)
H6A—C6—H6B109.2C27—C22—N4118.7 (3)
N3—C7—C8121.19 (19)C22—C23—C24120.7 (3)
N3—C7—C12120.9 (2)C22—C23—H23119.6
C8—C7—C12117.9 (2)C24—C23—H23119.6
C9—C8—C7120.4 (2)C25—C24—C23121.0 (3)
C9—C8—H8119.8C25—C24—H24119.5
C7—C8—H8119.8C23—C24—H24119.5
C10—C9—C8121.2 (2)C26—C25—C24118.4 (3)
C10—C9—H9119.4C26—C25—H25120.8
C8—C9—H9119.4C24—C25—H25120.8
C9—C10—C11119.1 (2)C25—C26—C27121.5 (3)
C9—C10—H10120.4C25—C26—H26119.3
C11—C10—H10120.4C27—C26—H26119.3
C10—C11—C12120.8 (2)C26—C27—C22120.6 (3)
C10—C11—H11119.6C26—C27—H27119.7
C12—C11—H11119.6C22—C27—H27119.7
C11—C12—C7120.6 (2)N4—C28—H28A109.5
C11—C12—H12119.7N4—C28—H28B109.5
C7—C12—H12119.7H28A—C28—H28B109.5
N5—C13—C1113.53 (19)N4—C28—H28C109.5
N5—C13—H13A108.9H28A—C28—H28C109.5
C1—C13—H13A108.9H28B—C28—H28C109.5
N5—C13—H13B108.9
C2—N1—C1—C42.9 (3)N3—C7—C12—C11178.6 (2)
C2—N1—C1—C13180.0 (2)C8—C7—C12—C110.4 (3)
C1—N1—C2—C30.0 (3)C14—N5—C13—C175.0 (2)
C1—N1—C2—C5179.5 (2)C20—N5—C13—C191.0 (3)
C4—N2—C3—C22.3 (3)N1—C1—C13—N537.6 (3)
C4—N2—C3—C6178.1 (2)C4—C1—C13—N5145.3 (2)
N1—C2—C3—N22.8 (3)C13—N5—C14—C157.6 (3)
C5—C2—C3—N2177.7 (2)C20—N5—C14—C15173.29 (19)
N1—C2—C3—C6177.6 (2)C13—N5—C14—C19173.80 (19)
C5—C2—C3—C62.0 (3)C20—N5—C14—C198.1 (3)
C3—N2—C4—C10.6 (3)N5—C14—C15—C16178.5 (2)
C3—N2—C4—C21177.8 (2)C19—C14—C15—C160.2 (3)
N1—C1—C4—N23.4 (3)C14—C15—C16—C170.6 (4)
C13—C1—C4—N2179.8 (2)C15—C16—C17—C180.9 (4)
N1—C1—C4—C21174.9 (2)C16—C17—C18—C191.0 (4)
C13—C1—C4—C212.0 (3)C17—C18—C19—C140.7 (4)
C7—N3—C5—C2173.1 (2)N5—C14—C19—C18178.4 (2)
C6—N3—C5—C22.3 (2)C15—C14—C19—C180.3 (3)
N1—C2—C5—N3179.7 (2)C22—N4—C21—C4154.45 (18)
C3—C2—C5—N30.1 (2)C28—N4—C21—C459.3 (2)
C7—N3—C6—C3174.2 (2)N2—C4—C21—N4103.8 (2)
C5—N3—C6—C33.3 (2)C1—C4—C21—N477.8 (3)
N2—C3—C6—N3176.5 (2)C28—N4—C22—C23146.2 (2)
C2—C3—C6—N33.2 (2)C21—N4—C22—C231.2 (3)
C6—N3—C7—C8175.5 (2)C28—N4—C22—C2736.3 (3)
C5—N3—C7—C85.5 (3)C21—N4—C22—C27178.72 (19)
C6—N3—C7—C125.6 (3)C27—C22—C23—C241.6 (3)
C5—N3—C7—C12175.6 (2)N4—C22—C23—C24175.92 (19)
N3—C7—C8—C9178.8 (2)C22—C23—C24—C250.6 (4)
C12—C7—C8—C90.1 (3)C23—C24—C25—C260.8 (4)
C7—C8—C9—C100.2 (4)C24—C25—C26—C271.3 (4)
C8—C9—C10—C110.3 (4)C25—C26—C27—C220.3 (4)
C9—C10—C11—C120.1 (4)C23—C22—C27—C261.2 (3)
C10—C11—C12—C70.3 (4)N4—C22—C27—C26176.5 (2)
Hydrogen-bond geometry (Å, º) top
Cg2 and Cg3 are the centroids of rings N1/N2/C1–C4 and C7–C12, respectively.
D—H···AD—HH···AD···AD—H···A
C15—H15···N40.932.613.542 (3)175
C28—H28B···N20.962.593.323 (3)133
C6—H6B···Cg2i0.972.823.601 (2)138
C23—H23···Cg3i0.932.973.881 (3)168
Symmetry code: (i) x+1, y+2, z.
 

Follow Acta Cryst. E
Sign up for e-alerts
Follow Acta Cryst. on Twitter
Follow us on facebook
Sign up for RSS feeds