In the crystal structure of the title compound, [Cd(C
8H
7O
2)
2(C
6H
6N
2O)
2(H
2O)]·H
2O, the Cd
II cation is coordinated by two 4-methylbenzoate (PMB) anions, two isonicotinamide (INA) ligands and one water molecule in a distorted octahedral CdN
2O
4 geometry. One of PMB ions acts as a bidentate ligand while the other and the two INA are monodentate ligands. An O—H
O hydrogen bond links the uncoordinated water molecule to the carboxyl groups of the complex. The dihedral angles between the carboxyl groups and the adjacent benzene rings are 10.28 (11) and 21.24 (9)°, while the two benzene rings and the two pyridine rings are oriented at dihedral angles of 6.90 (4) and 88.64 (4)°, respectively. In the crystal structure, O—H
O and N—H
O hydrogen bonds link the molecules into a supramolecular structure. A π–π contact between the benzene rings [centroid–centroid distance = 3.911 (1) Å] may further stabilize the crystal structure. Weak C—H
π interactions involving the pyridine rings also occur in the crystal structure.
Supporting information
CCDC reference: 774128
Key indicators
- Single-crystal X-ray study
- T = 102 K
- Mean (C-C) = 0.002 Å
- R factor = 0.020
- wR factor = 0.053
- Data-to-parameter ratio = 17.7
checkCIF/PLATON results
No syntax errors found
Alert level B
PLAT232_ALERT_2_B Hirshfeld Test Diff (M-X) Cd1 -- O4 .. 11.80 su
Alert level C
PLAT232_ALERT_2_C Hirshfeld Test Diff (M-X) Cd1 -- O1 .. 6.44 su
PLAT232_ALERT_2_C Hirshfeld Test Diff (M-X) Cd1 -- N3 .. 7.06 su
PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.600 21
PLAT912_ALERT_4_C Missing # of FCF Reflections Above STh/L= 0.600 64
0 ALERT level A = In general: serious problem
1 ALERT level B = Potentially serious problem
4 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
3 ALERT type 2 Indicator that the structure model may be wrong or deficient
1 ALERT type 3 Indicator that the structure quality may be low
1 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
The title compound was prepared by the reaction of 3CdSO4.8H2O (1.29 g, 5 mmol) in H2O (40 ml) and INA (1.22 g, 10 mmol) in H2O (15 ml) with sodium
4-methylbenzoate (1.58 g, 10 mmol) in H2O (350 ml). The mixture was filtered
and set aside to crystallize at ambient temperature for one week, giving
colorless single crystals.
Atoms H21, H22, H41, H42 (for NH2) and H71, H72, H81, H82 (for H2O) were
located in a difference Fourier map and refined isotropically.
The remaining H
atoms were positioned geometrically with C—H = 0.93 and 0.96 Å for
aromatic and methyl H atoms and constrained to ride on their parent atoms,
with Uiso(H) = xUeq(C), where x = 1.5 for methyl H and x = 1.2 for
aromatic H atoms.
Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 2009).
Aquabis(isonicotinamide-
κN1)bis(4-methylbenzoato)-
κO;
κ2O,
O'-cadmium(II) monohydrate
top
Crystal data top
[Cd(C8H7O2)2(C6H6N2O)2(H2O)]·H2O | Z = 2 |
Mr = 662.97 | F(000) = 676 |
Triclinic, P1 | Dx = 1.555 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 9.5032 (2) Å | Cell parameters from 8576 reflections |
b = 12.3543 (3) Å | θ = 2.4–28.3° |
c = 13.6134 (3) Å | µ = 0.83 mm−1 |
α = 78.278 (3)° | T = 102 K |
β = 69.776 (2)° | Block, colorless |
γ = 71.746 (3)° | 0.40 × 0.20 × 0.15 mm |
V = 1416.18 (6) Å3 | |
Data collection top
Bruker Kappa APEXII CCD area-detector diffractometer | 7154 independent reflections |
Radiation source: fine-focus sealed tube | 6962 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.021 |
ϕ and ω scans | θmax = 28.6°, θmin = 1.6° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −12→12 |
Tmin = 0.819, Tmax = 0.881 | k = −16→16 |
25922 measured reflections | l = −18→18 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.020 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.053 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.14 | w = 1/[σ2(Fo2) + (0.0175P)2 + 1.1925P] where P = (Fo2 + 2Fc2)/3 |
7154 reflections | (Δ/σ)max = 0.001 |
404 parameters | Δρmax = 0.56 e Å−3 |
0 restraints | Δρmin = −0.38 e Å−3 |
Crystal data top
[Cd(C8H7O2)2(C6H6N2O)2(H2O)]·H2O | γ = 71.746 (3)° |
Mr = 662.97 | V = 1416.18 (6) Å3 |
Triclinic, P1 | Z = 2 |
a = 9.5032 (2) Å | Mo Kα radiation |
b = 12.3543 (3) Å | µ = 0.83 mm−1 |
c = 13.6134 (3) Å | T = 102 K |
α = 78.278 (3)° | 0.40 × 0.20 × 0.15 mm |
β = 69.776 (2)° | |
Data collection top
Bruker Kappa APEXII CCD area-detector diffractometer | 7154 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 6962 reflections with I > 2σ(I) |
Tmin = 0.819, Tmax = 0.881 | Rint = 0.021 |
25922 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.020 | 0 restraints |
wR(F2) = 0.053 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.14 | Δρmax = 0.56 e Å−3 |
7154 reflections | Δρmin = −0.38 e Å−3 |
404 parameters | |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are
estimated using the full covariance matrix. The cell esds are taken into
account individually in the estimation of esds in distances, angles and
torsion angles; correlations between esds in cell parameters are only used
when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc. and is
not relevant to the choice of reflections for refinement. R-factors
based on F2 are statistically about twice as large as those based on
F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Cd1 | 0.141608 (11) | 0.121190 (8) | 0.094078 (7) | 0.00977 (3) | |
O1 | 0.21408 (12) | 0.17237 (9) | 0.21480 (8) | 0.0153 (2) | |
O2 | 0.43486 (13) | 0.06777 (9) | 0.11883 (8) | 0.0158 (2) | |
O3 | −0.09543 (12) | 0.15690 (9) | 0.04849 (8) | 0.0150 (2) | |
O4 | −0.08901 (13) | 0.26914 (10) | 0.15327 (9) | 0.0164 (2) | |
O5 | 0.56683 (13) | 0.41643 (10) | −0.38584 (9) | 0.0199 (2) | |
O6 | −0.03527 (14) | −0.40999 (9) | 0.37641 (9) | 0.0178 (2) | |
O7 | 0.25490 (14) | −0.02091 (10) | −0.01623 (9) | 0.0183 (2) | |
H71 | 0.345 (3) | −0.038 (2) | −0.0464 (19) | 0.030 (6)* | |
H72 | 0.214 (3) | −0.064 (2) | −0.0261 (18) | 0.028 (6)* | |
O8 | −0.06722 (16) | 0.23407 (12) | 0.36356 (10) | 0.0224 (2) | |
H81 | −0.115 (3) | 0.252 (2) | 0.323 (2) | 0.039 (7)* | |
H82 | 0.021 (3) | 0.216 (2) | 0.326 (2) | 0.039 (7)* | |
N1 | 0.24879 (15) | 0.23682 (11) | −0.05300 (10) | 0.0131 (2) | |
N2 | 0.32591 (17) | 0.46852 (14) | −0.40532 (11) | 0.0222 (3) | |
H21 | 0.355 (3) | 0.502 (2) | −0.4672 (19) | 0.029 (6)* | |
H22 | 0.235 (3) | 0.4542 (19) | −0.3832 (18) | 0.027 (6)* | |
N3 | 0.06838 (15) | −0.03017 (11) | 0.21984 (10) | 0.0139 (2) | |
N4 | 0.02873 (16) | −0.36600 (12) | 0.50561 (10) | 0.0162 (2) | |
H41 | 0.056 (2) | −0.3201 (18) | 0.5322 (17) | 0.022 (5)* | |
H42 | 0.020 (2) | −0.4306 (19) | 0.5415 (16) | 0.019 (5)* | |
C1 | 0.35814 (17) | 0.12189 (12) | 0.19750 (11) | 0.0122 (3) | |
C2 | 0.43118 (17) | 0.12606 (13) | 0.27780 (11) | 0.0138 (3) | |
C3 | 0.34802 (19) | 0.19738 (14) | 0.35725 (13) | 0.0190 (3) | |
H3 | 0.2493 | 0.2439 | 0.3587 | 0.023* | |
C4 | 0.4114 (2) | 0.19972 (16) | 0.43464 (13) | 0.0223 (3) | |
H4 | 0.3544 | 0.2478 | 0.4874 | 0.027* | |
C5 | 0.55876 (19) | 0.13100 (15) | 0.43413 (12) | 0.0196 (3) | |
C6 | 0.64170 (19) | 0.06017 (15) | 0.35394 (13) | 0.0208 (3) | |
H6 | 0.7406 | 0.0138 | 0.3523 | 0.025* | |
C7 | 0.57917 (18) | 0.05760 (14) | 0.27640 (12) | 0.0174 (3) | |
H7 | 0.6364 | 0.0099 | 0.2233 | 0.021* | |
C8 | 0.6266 (2) | 0.13244 (18) | 0.51874 (14) | 0.0276 (4) | |
H8A | 0.7263 | 0.0775 | 0.5079 | 0.041* | |
H8B | 0.5582 | 0.1132 | 0.5865 | 0.041* | |
H8C | 0.6384 | 0.2075 | 0.5157 | 0.041* | |
C9 | −0.16048 (17) | 0.24072 (12) | 0.10406 (11) | 0.0123 (3) | |
C10 | −0.32334 (17) | 0.30742 (12) | 0.10992 (12) | 0.0130 (3) | |
C11 | −0.41385 (18) | 0.37317 (13) | 0.19319 (12) | 0.0166 (3) | |
H11 | −0.3706 | 0.3785 | 0.2432 | 0.020* | |
C12 | −0.56823 (19) | 0.43074 (14) | 0.20192 (13) | 0.0195 (3) | |
H12 | −0.6280 | 0.4732 | 0.2584 | 0.023* | |
C13 | −0.63418 (18) | 0.42543 (13) | 0.12678 (13) | 0.0177 (3) | |
C14 | −0.54103 (18) | 0.36423 (13) | 0.04114 (13) | 0.0176 (3) | |
H14 | −0.5822 | 0.3633 | −0.0114 | 0.021* | |
C15 | −0.38809 (18) | 0.30477 (13) | 0.03297 (12) | 0.0152 (3) | |
H15 | −0.3283 | 0.2629 | −0.0240 | 0.018* | |
C16 | −0.80317 (19) | 0.48229 (16) | 0.13748 (15) | 0.0257 (4) | |
H16A | −0.8456 | 0.5324 | 0.1920 | 0.039* | |
H16B | −0.8590 | 0.4248 | 0.1551 | 0.039* | |
H16C | −0.8127 | 0.5259 | 0.0721 | 0.039* | |
C17 | 0.16137 (17) | 0.33676 (13) | −0.08530 (12) | 0.0152 (3) | |
H17 | 0.0612 | 0.3651 | −0.0419 | 0.018* | |
C18 | 0.21389 (18) | 0.39975 (13) | −0.18067 (12) | 0.0166 (3) | |
H18 | 0.1500 | 0.4686 | −0.2009 | 0.020* | |
C19 | 0.36446 (17) | 0.35759 (13) | −0.24544 (11) | 0.0134 (3) | |
C20 | 0.45742 (18) | 0.25694 (13) | −0.20997 (12) | 0.0153 (3) | |
H20 | 0.5599 | 0.2288 | −0.2501 | 0.018* | |
C21 | 0.39564 (18) | 0.19876 (13) | −0.11404 (12) | 0.0148 (3) | |
H21A | 0.4582 | 0.1308 | −0.0911 | 0.018* | |
C22 | 0.42827 (18) | 0.41740 (13) | −0.35244 (12) | 0.0154 (3) | |
C23 | 0.01222 (18) | −0.10290 (13) | 0.19260 (12) | 0.0153 (3) | |
H23 | −0.0121 | −0.0849 | 0.1296 | 0.018* | |
C24 | −0.01121 (18) | −0.20371 (13) | 0.25425 (12) | 0.0158 (3) | |
H24 | −0.0495 | −0.2523 | 0.2325 | 0.019* | |
C25 | 0.02332 (17) | −0.23100 (12) | 0.34907 (11) | 0.0125 (3) | |
C26 | 0.07689 (18) | −0.15443 (13) | 0.37961 (12) | 0.0160 (3) | |
H26 | 0.0976 | −0.1688 | 0.4437 | 0.019* | |
C27 | 0.09879 (18) | −0.05607 (13) | 0.31243 (12) | 0.0156 (3) | |
H27 | 0.1363 | −0.0057 | 0.3326 | 0.019* | |
C28 | 0.00343 (17) | −0.34324 (12) | 0.41280 (11) | 0.0131 (3) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Cd1 | 0.01036 (5) | 0.01012 (5) | 0.00874 (5) | −0.00363 (4) | −0.00264 (4) | 0.00016 (3) |
O1 | 0.0118 (5) | 0.0192 (5) | 0.0162 (5) | −0.0038 (4) | −0.0054 (4) | −0.0029 (4) |
O2 | 0.0165 (5) | 0.0163 (5) | 0.0152 (5) | −0.0032 (4) | −0.0054 (4) | −0.0038 (4) |
O3 | 0.0122 (5) | 0.0160 (5) | 0.0169 (5) | −0.0018 (4) | −0.0048 (4) | −0.0040 (4) |
O4 | 0.0142 (5) | 0.0201 (5) | 0.0177 (5) | −0.0041 (4) | −0.0076 (4) | −0.0034 (4) |
O5 | 0.0164 (5) | 0.0272 (6) | 0.0148 (5) | −0.0095 (5) | −0.0039 (4) | 0.0046 (4) |
O6 | 0.0239 (6) | 0.0157 (5) | 0.0185 (5) | −0.0105 (4) | −0.0098 (4) | 0.0023 (4) |
O7 | 0.0141 (5) | 0.0195 (6) | 0.0213 (6) | −0.0072 (5) | 0.0013 (4) | −0.0100 (4) |
O8 | 0.0184 (6) | 0.0347 (7) | 0.0148 (5) | −0.0063 (5) | −0.0039 (5) | −0.0075 (5) |
N1 | 0.0138 (6) | 0.0132 (6) | 0.0125 (6) | −0.0055 (5) | −0.0033 (5) | 0.0003 (4) |
N2 | 0.0179 (7) | 0.0322 (8) | 0.0158 (6) | −0.0125 (6) | −0.0065 (5) | 0.0105 (6) |
N3 | 0.0152 (6) | 0.0144 (6) | 0.0121 (6) | −0.0049 (5) | −0.0038 (5) | −0.0006 (4) |
N4 | 0.0225 (7) | 0.0131 (6) | 0.0147 (6) | −0.0078 (5) | −0.0072 (5) | 0.0024 (5) |
C1 | 0.0128 (6) | 0.0106 (6) | 0.0138 (6) | −0.0055 (5) | −0.0045 (5) | 0.0017 (5) |
C2 | 0.0135 (6) | 0.0162 (7) | 0.0128 (6) | −0.0060 (5) | −0.0045 (5) | 0.0001 (5) |
C3 | 0.0157 (7) | 0.0226 (8) | 0.0205 (7) | −0.0035 (6) | −0.0068 (6) | −0.0063 (6) |
C4 | 0.0224 (8) | 0.0292 (9) | 0.0190 (8) | −0.0074 (7) | −0.0063 (6) | −0.0091 (6) |
C5 | 0.0207 (8) | 0.0278 (8) | 0.0155 (7) | −0.0132 (7) | −0.0078 (6) | 0.0014 (6) |
C6 | 0.0142 (7) | 0.0299 (9) | 0.0190 (7) | −0.0055 (6) | −0.0079 (6) | 0.0006 (6) |
C7 | 0.0146 (7) | 0.0223 (8) | 0.0145 (7) | −0.0037 (6) | −0.0044 (6) | −0.0022 (6) |
C8 | 0.0299 (9) | 0.0432 (11) | 0.0195 (8) | −0.0202 (8) | −0.0128 (7) | 0.0018 (7) |
C9 | 0.0119 (6) | 0.0136 (6) | 0.0109 (6) | −0.0049 (5) | −0.0029 (5) | 0.0016 (5) |
C10 | 0.0114 (6) | 0.0124 (6) | 0.0157 (7) | −0.0038 (5) | −0.0049 (5) | −0.0002 (5) |
C11 | 0.0158 (7) | 0.0173 (7) | 0.0183 (7) | −0.0032 (6) | −0.0067 (6) | −0.0042 (6) |
C12 | 0.0162 (7) | 0.0189 (7) | 0.0209 (8) | −0.0012 (6) | −0.0037 (6) | −0.0057 (6) |
C13 | 0.0130 (7) | 0.0150 (7) | 0.0246 (8) | −0.0029 (5) | −0.0067 (6) | −0.0004 (6) |
C14 | 0.0169 (7) | 0.0159 (7) | 0.0241 (8) | −0.0038 (6) | −0.0119 (6) | −0.0019 (6) |
C15 | 0.0151 (7) | 0.0136 (7) | 0.0177 (7) | −0.0028 (5) | −0.0064 (6) | −0.0027 (5) |
C16 | 0.0142 (7) | 0.0257 (9) | 0.0352 (10) | 0.0002 (6) | −0.0095 (7) | −0.0039 (7) |
C17 | 0.0117 (6) | 0.0170 (7) | 0.0145 (7) | −0.0040 (5) | −0.0029 (5) | 0.0015 (5) |
C18 | 0.0143 (7) | 0.0164 (7) | 0.0162 (7) | −0.0037 (6) | −0.0051 (6) | 0.0044 (6) |
C19 | 0.0151 (7) | 0.0151 (7) | 0.0114 (6) | −0.0072 (5) | −0.0047 (5) | 0.0018 (5) |
C20 | 0.0143 (7) | 0.0154 (7) | 0.0136 (7) | −0.0040 (5) | −0.0017 (5) | −0.0008 (5) |
C21 | 0.0154 (7) | 0.0129 (7) | 0.0144 (7) | −0.0029 (5) | −0.0042 (5) | 0.0002 (5) |
C22 | 0.0174 (7) | 0.0161 (7) | 0.0123 (6) | −0.0073 (6) | −0.0035 (5) | 0.0019 (5) |
C23 | 0.0190 (7) | 0.0170 (7) | 0.0115 (6) | −0.0071 (6) | −0.0059 (5) | 0.0009 (5) |
C24 | 0.0216 (7) | 0.0152 (7) | 0.0132 (7) | −0.0082 (6) | −0.0058 (6) | −0.0012 (5) |
C25 | 0.0124 (6) | 0.0117 (6) | 0.0123 (6) | −0.0037 (5) | −0.0033 (5) | 0.0012 (5) |
C26 | 0.0202 (7) | 0.0171 (7) | 0.0142 (7) | −0.0088 (6) | −0.0088 (6) | 0.0028 (5) |
C27 | 0.0203 (7) | 0.0154 (7) | 0.0145 (7) | −0.0091 (6) | −0.0073 (6) | 0.0014 (5) |
C28 | 0.0111 (6) | 0.0128 (6) | 0.0136 (6) | −0.0036 (5) | −0.0025 (5) | 0.0009 (5) |
Geometric parameters (Å, º) top
Cd1—O1 | 2.2478 (11) | C8—C5 | 1.507 (2) |
Cd1—O3 | 2.4263 (11) | C8—H8A | 0.9600 |
Cd1—O4 | 2.3794 (11) | C8—H8B | 0.9600 |
Cd1—O7 | 2.2947 (11) | C8—H8C | 0.9600 |
Cd1—N1 | 2.3295 (12) | C9—C10 | 1.491 (2) |
Cd1—N3 | 2.3671 (13) | C10—C11 | 1.395 (2) |
O1—C1 | 1.2730 (18) | C10—C15 | 1.396 (2) |
O2—C1 | 1.2535 (18) | C11—H11 | 0.9300 |
O3—C9 | 1.2730 (18) | C12—C11 | 1.390 (2) |
O4—C9 | 1.2622 (18) | C12—C13 | 1.393 (2) |
O5—C22 | 1.2325 (19) | C12—H12 | 0.9300 |
O6—C28 | 1.2422 (18) | C13—C16 | 1.506 (2) |
O7—H71 | 0.79 (3) | C14—C13 | 1.393 (2) |
O7—H72 | 0.80 (2) | C14—C15 | 1.385 (2) |
O8—H81 | 0.79 (3) | C14—H14 | 0.9300 |
O8—H82 | 0.81 (3) | C15—H15 | 0.9300 |
N1—C17 | 1.3406 (19) | C16—H16A | 0.9600 |
N1—C21 | 1.3435 (19) | C16—H16B | 0.9600 |
N2—C22 | 1.333 (2) | C16—H16C | 0.9600 |
N2—H21 | 0.85 (2) | C17—H17 | 0.9300 |
N2—H22 | 0.87 (2) | C18—C17 | 1.387 (2) |
N3—C23 | 1.3425 (19) | C18—C19 | 1.394 (2) |
N3—C27 | 1.3433 (19) | C18—H18 | 0.9300 |
N4—C28 | 1.325 (2) | C20—C19 | 1.387 (2) |
N4—H41 | 0.87 (2) | C20—H20 | 0.9300 |
N4—H42 | 0.86 (2) | C21—C20 | 1.385 (2) |
C1—C2 | 1.500 (2) | C21—H21A | 0.9300 |
C2—C3 | 1.390 (2) | C22—C19 | 1.506 (2) |
C2—C7 | 1.392 (2) | C23—C24 | 1.387 (2) |
C3—C4 | 1.391 (2) | C23—H23 | 0.9300 |
C3—H3 | 0.9300 | C24—H24 | 0.9300 |
C4—C5 | 1.391 (2) | C25—C24 | 1.391 (2) |
C4—H4 | 0.9300 | C26—C25 | 1.391 (2) |
C6—C5 | 1.393 (2) | C26—C27 | 1.390 (2) |
C6—C7 | 1.388 (2) | C26—H26 | 0.9300 |
C6—H6 | 0.9300 | C27—H27 | 0.9300 |
C7—H7 | 0.9300 | C28—C25 | 1.5077 (19) |
| | | |
O1—Cd1—O3 | 137.23 (4) | O4—C9—O3 | 121.19 (13) |
O1—Cd1—O4 | 83.65 (4) | O4—C9—C10 | 119.45 (13) |
O1—Cd1—O7 | 133.14 (4) | C11—C10—C15 | 118.94 (14) |
O1—Cd1—N1 | 99.39 (4) | C11—C10—C9 | 120.24 (13) |
O1—Cd1—N3 | 87.65 (4) | C15—C10—C9 | 120.82 (13) |
O4—Cd1—O3 | 54.71 (4) | C10—C11—H11 | 119.8 |
O7—Cd1—O3 | 88.51 (4) | C12—C11—C10 | 120.44 (14) |
O7—Cd1—O4 | 143.07 (4) | C12—C11—H11 | 119.8 |
O7—Cd1—N1 | 84.40 (4) | C11—C12—C13 | 120.59 (15) |
O7—Cd1—N3 | 82.88 (4) | C11—C12—H12 | 119.7 |
N1—Cd1—O3 | 93.12 (4) | C13—C12—H12 | 119.7 |
N1—Cd1—O4 | 93.53 (4) | C12—C13—C14 | 118.64 (14) |
N1—Cd1—N3 | 167.06 (4) | C12—C13—C16 | 121.48 (15) |
N3—Cd1—O3 | 88.91 (4) | C14—C13—C16 | 119.87 (15) |
N3—Cd1—O4 | 98.06 (4) | C13—C14—H14 | 119.5 |
C1—O1—Cd1 | 105.84 (9) | C15—C14—C13 | 121.06 (14) |
C9—O3—Cd1 | 90.83 (8) | C15—C14—H14 | 119.5 |
C9—O4—Cd1 | 93.27 (9) | C10—C15—H15 | 119.9 |
Cd1—O7—H71 | 123.1 (17) | C14—C15—C10 | 120.21 (14) |
Cd1—O7—H72 | 127.0 (17) | C14—C15—H15 | 119.9 |
H72—O7—H71 | 110 (2) | C13—C16—H16A | 109.5 |
H81—O8—H82 | 103 (3) | C13—C16—H16B | 109.5 |
C17—N1—Cd1 | 121.04 (10) | C13—C16—H16C | 109.5 |
C17—N1—C21 | 118.25 (13) | H16A—C16—H16B | 109.5 |
C21—N1—Cd1 | 120.31 (10) | H16A—C16—H16C | 109.5 |
C22—N2—H21 | 120.3 (15) | H16B—C16—H16C | 109.5 |
C22—N2—H22 | 119.5 (15) | N1—C17—C18 | 122.87 (14) |
H22—N2—H21 | 119 (2) | N1—C17—H17 | 118.6 |
C23—N3—Cd1 | 118.71 (10) | C18—C17—H17 | 118.6 |
C23—N3—C27 | 117.68 (13) | C17—C18—C19 | 118.55 (14) |
C27—N3—Cd1 | 123.03 (10) | C17—C18—H18 | 120.7 |
C28—N4—H41 | 124.1 (14) | C19—C18—H18 | 120.7 |
C28—N4—H42 | 118.4 (14) | C18—C19—C22 | 122.10 (14) |
H42—N4—H41 | 117.4 (19) | C20—C19—C18 | 118.62 (13) |
O1—C1—C2 | 117.01 (13) | C20—C19—C22 | 119.28 (13) |
O2—C1—O1 | 121.75 (13) | C19—C20—H20 | 120.4 |
O2—C1—C2 | 121.20 (13) | C21—C20—C19 | 119.15 (14) |
C3—C2—C1 | 119.49 (14) | C21—C20—H20 | 120.4 |
C3—C2—C7 | 119.02 (14) | N1—C21—C20 | 122.46 (14) |
C7—C2—C1 | 121.47 (13) | N1—C21—H21A | 118.8 |
C2—C3—C4 | 120.48 (15) | C20—C21—H21A | 118.8 |
C2—C3—H3 | 119.8 | O5—C22—N2 | 124.40 (14) |
C4—C3—H3 | 119.8 | O5—C22—C19 | 120.11 (14) |
C3—C4—H4 | 119.6 | N2—C22—C19 | 115.49 (13) |
C5—C4—C3 | 120.82 (15) | N3—C23—C24 | 122.90 (14) |
C5—C4—H4 | 119.6 | N3—C23—H23 | 118.5 |
C4—C5—C6 | 118.36 (14) | C24—C23—H23 | 118.5 |
C4—C5—C8 | 120.82 (16) | C23—C24—C25 | 119.07 (14) |
C6—C5—C8 | 120.82 (16) | C23—C24—H24 | 120.5 |
C5—C6—H6 | 119.5 | C25—C24—H24 | 120.5 |
C7—C6—C5 | 121.08 (15) | C24—C25—C26 | 118.47 (13) |
C7—C6—H6 | 119.5 | C24—C25—C28 | 118.30 (13) |
C2—C7—H7 | 119.9 | C26—C25—C28 | 123.23 (13) |
C6—C7—C2 | 120.24 (15) | C25—C26—H26 | 120.7 |
C6—C7—H7 | 119.9 | C27—C26—C25 | 118.64 (14) |
C5—C8—H8A | 109.5 | C27—C26—H26 | 120.7 |
C5—C8—H8B | 109.5 | N3—C27—C26 | 123.20 (14) |
C5—C8—H8C | 109.5 | N3—C27—H27 | 118.4 |
H8A—C8—H8B | 109.5 | C26—C27—H27 | 118.4 |
H8A—C8—H8C | 109.5 | O6—C28—N4 | 123.03 (14) |
H8B—C8—H8C | 109.5 | O6—C28—C25 | 119.00 (13) |
O3—C9—C10 | 119.35 (13) | N4—C28—C25 | 117.97 (13) |
| | | |
O3—Cd1—O1—C1 | 178.82 (8) | O1—C1—C2—C3 | −9.6 (2) |
O4—Cd1—O1—C1 | −168.65 (9) | O1—C1—C2—C7 | 168.54 (14) |
O7—Cd1—O1—C1 | 15.00 (11) | O2—C1—C2—C3 | 172.66 (14) |
N1—Cd1—O1—C1 | −76.11 (9) | O2—C1—C2—C7 | −9.2 (2) |
N3—Cd1—O1—C1 | 92.97 (9) | C1—C2—C3—C4 | 177.80 (14) |
O1—Cd1—O3—C9 | 15.18 (11) | C7—C2—C3—C4 | −0.4 (2) |
O4—Cd1—O3—C9 | −0.14 (8) | C1—C2—C7—C6 | −177.67 (14) |
O7—Cd1—O3—C9 | −176.56 (9) | C3—C2—C7—C6 | 0.5 (2) |
N1—Cd1—O3—C9 | −92.25 (9) | C2—C3—C4—C5 | 0.0 (3) |
N3—Cd1—O3—C9 | 100.53 (9) | C3—C4—C5—C6 | 0.3 (3) |
O1—Cd1—O4—C9 | −169.47 (9) | C3—C4—C5—C8 | −179.23 (16) |
O3—Cd1—O4—C9 | 0.14 (8) | C5—C6—C7—C2 | −0.2 (2) |
O7—Cd1—O4—C9 | 6.09 (12) | C7—C6—C5—C4 | −0.2 (2) |
N1—Cd1—O4—C9 | 91.47 (9) | C7—C6—C5—C8 | 179.32 (15) |
N3—Cd1—O4—C9 | −82.76 (9) | O3—C9—C10—C11 | 159.36 (14) |
O1—Cd1—N1—C17 | −98.58 (11) | O3—C9—C10—C15 | −20.3 (2) |
O1—Cd1—N1—C21 | 88.82 (11) | O4—C9—C10—C11 | −21.4 (2) |
O3—Cd1—N1—C17 | 40.37 (11) | O4—C9—C10—C15 | 158.92 (14) |
O3—Cd1—N1—C21 | −132.23 (11) | C9—C10—C11—C12 | −176.66 (14) |
O4—Cd1—N1—C17 | −14.44 (11) | C15—C10—C11—C12 | 3.0 (2) |
O4—Cd1—N1—C21 | 172.96 (11) | C9—C10—C15—C14 | 177.96 (14) |
O7—Cd1—N1—C17 | 128.57 (12) | C11—C10—C15—C14 | −1.7 (2) |
O7—Cd1—N1—C21 | −44.04 (11) | C13—C12—C11—C10 | −1.2 (2) |
N3—Cd1—N1—C17 | 139.16 (18) | C11—C12—C13—C14 | −1.9 (2) |
N3—Cd1—N1—C21 | −33.4 (3) | C11—C12—C13—C16 | 176.95 (15) |
O1—Cd1—N3—C23 | −178.51 (11) | C15—C14—C13—C12 | 3.3 (2) |
O1—Cd1—N3—C27 | −7.44 (12) | C15—C14—C13—C16 | −175.65 (15) |
O3—Cd1—N3—C23 | 44.13 (11) | C13—C14—C15—C10 | −1.5 (2) |
O3—Cd1—N3—C27 | −144.80 (12) | C19—C18—C17—N1 | −0.4 (2) |
O4—Cd1—N3—C23 | 98.24 (11) | C17—C18—C19—C20 | −2.6 (2) |
O4—Cd1—N3—C27 | −90.69 (12) | C17—C18—C19—C22 | 177.02 (14) |
O7—Cd1—N3—C23 | −44.50 (11) | C21—C20—C19—C18 | 3.1 (2) |
O7—Cd1—N3—C27 | 126.57 (12) | C21—C20—C19—C22 | −176.49 (13) |
N1—Cd1—N3—C23 | −55.1 (2) | N1—C21—C20—C19 | −0.8 (2) |
N1—Cd1—N3—C27 | 115.9 (2) | O5—C22—C19—C18 | 145.44 (16) |
Cd1—N1—C17—C18 | −170.02 (12) | O5—C22—C19—C20 | −35.0 (2) |
C21—N1—C17—C18 | 2.7 (2) | N2—C22—C19—C18 | −34.9 (2) |
Cd1—N1—C21—C20 | 170.65 (11) | N2—C22—C19—C20 | 144.70 (15) |
C17—N1—C21—C20 | −2.2 (2) | N3—C23—C24—C25 | 0.6 (2) |
Cd1—N3—C23—C24 | 169.79 (12) | C26—C25—C24—C23 | 1.5 (2) |
C27—N3—C23—C24 | −1.8 (2) | C28—C25—C24—C23 | −177.50 (14) |
Cd1—N3—C27—C26 | −170.25 (12) | C27—C26—C25—C24 | −2.2 (2) |
C23—N3—C27—C26 | 0.9 (2) | C27—C26—C25—C28 | 176.66 (14) |
Cd1—O1—C1—O2 | 7.16 (16) | C25—C26—C27—N3 | 1.1 (2) |
Cd1—O1—C1—C2 | −170.52 (10) | O6—C28—C25—C24 | 3.6 (2) |
Cd1—O3—C9—O4 | 0.24 (14) | O6—C28—C25—C26 | −175.30 (14) |
Cd1—O3—C9—C10 | 179.43 (11) | N4—C28—C25—C24 | −176.55 (14) |
Cd1—O4—C9—O3 | −0.25 (14) | N4—C28—C25—C26 | 4.5 (2) |
Cd1—O4—C9—C10 | −179.43 (11) | | |
Hydrogen-bond geometry (Å, º) topCg3 and Cg4 are the centroids of the N1/C17-C21 and N3/C23-C27
rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H21···O5i | 0.85 (2) | 2.05 (2) | 2.8990 (19) | 177 (2) |
N2—H22···O6ii | 0.87 (3) | 2.10 (3) | 2.948 (2) | 163 (2) |
N4—H41···O8iii | 0.87 (2) | 1.99 (2) | 2.822 (2) | 160 (2) |
N4—H42···O6iv | 0.86 (2) | 2.05 (2) | 2.8979 (18) | 171 (2) |
O7—H71···O2v | 0.79 (3) | 1.93 (3) | 2.7186 (19) | 175 (2) |
O7—H72···O3ii | 0.80 (3) | 1.97 (3) | 2.7690 (18) | 174 (3) |
O8—H81···O4 | 0.79 (3) | 2.21 (3) | 2.8767 (18) | 143 (3) |
O8—H82···O1 | 0.80 (3) | 1.93 (3) | 2.7269 (18) | 169 (3) |
C6—H6···Cg4vi | 0.93 | 2.82 | 3.720 (2) | 163 |
C14—H14···Cg3vii | 0.93 | 2.78 | 3.6840 (19) | 164 |
Symmetry codes: (i) −x+1, −y+1, −z−1; (ii) −x, −y, −z; (iii) −x, −y, −z+1; (iv) −x, −y−1, −z+1; (v) −x+1, −y, −z; (vi) x+1, y, z; (vii) x−1, y, z. |
Experimental details
Crystal data |
Chemical formula | [Cd(C8H7O2)2(C6H6N2O)2(H2O)]·H2O |
Mr | 662.97 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 102 |
a, b, c (Å) | 9.5032 (2), 12.3543 (3), 13.6134 (3) |
α, β, γ (°) | 78.278 (3), 69.776 (2), 71.746 (3) |
V (Å3) | 1416.18 (6) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.83 |
Crystal size (mm) | 0.40 × 0.20 × 0.15 |
|
Data collection |
Diffractometer | Bruker Kappa APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.819, 0.881 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 25922, 7154, 6962 |
Rint | 0.021 |
(sin θ/λ)max (Å−1) | 0.673 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.020, 0.053, 1.14 |
No. of reflections | 7154 |
No. of parameters | 404 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.56, −0.38 |
Selected bond lengths (Å) topCd1—O1 | 2.2478 (11) | Cd1—O7 | 2.2947 (11) |
Cd1—O3 | 2.4263 (11) | Cd1—N1 | 2.3295 (12) |
Cd1—O4 | 2.3794 (11) | Cd1—N3 | 2.3671 (13) |
Hydrogen-bond geometry (Å, º) topCg3 and Cg4 are the centroids of the N1/C17-C21 and N3/C23-C27
rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H21···O5i | 0.85 (2) | 2.05 (2) | 2.8990 (19) | 177 (2) |
N2—H22···O6ii | 0.87 (3) | 2.10 (3) | 2.948 (2) | 163 (2) |
N4—H41···O8iii | 0.87 (2) | 1.99 (2) | 2.822 (2) | 160 (2) |
N4—H42···O6iv | 0.86 (2) | 2.05 (2) | 2.8979 (18) | 171 (2) |
O7—H71···O2v | 0.79 (3) | 1.93 (3) | 2.7186 (19) | 175 (2) |
O7—H72···O3ii | 0.80 (3) | 1.97 (3) | 2.7690 (18) | 174 (3) |
O8—H81···O4 | 0.79 (3) | 2.21 (3) | 2.8767 (18) | 143 (3) |
O8—H82···O1 | 0.80 (3) | 1.93 (3) | 2.7269 (18) | 169 (3) |
C6—H6···Cg4vi | 0.93 | 2.82 | 3.7196 (20) | 163 |
C14—H14···Cg3vii | 0.93 | 2.78 | 3.6840 (19) | 164 |
Symmetry codes: (i) −x+1, −y+1, −z−1; (ii) −x, −y, −z; (iii) −x, −y, −z+1; (iv) −x, −y−1, −z+1; (v) −x+1, −y, −z; (vi) x+1, y, z; (vii) x−1, y, z. |
As a part of our ongoing investigation on transition metal complexes of nicotinamide (NA), one form of niacin (Krishnamachari, 1974), and/or the nicotinic acid derivative N,N-diethylnicotinamide (DENA), an important respiratory stimulant (Bigoli et al., 1972), the title compound was synthesized and its crystal structure is reported herein.
The title compound, (I), is a monomeric complex, where the CdII ion is surrounded by two 4-methylbenzoate (PMB) and two isonicotinamide (INA) ligands and one water molecule. One of the PMB ions acts as a bidentate ligand, while the other PMB and two INA are monodentate ligands. The crystal structures of similar complexes of CdII, CoII, MnII and ZnII ions, [Cd(C8H5O3)2(C6H6N2O)2(H2O)].H2O, (II) (Hökelek et al., 2009a), [Co(C9H10NO2)2(C6H6N2O)(H2O)2], (III) (Hökelek et al., 2009b), [Mn(C9H10NO2)2(C6H6N2O)(H2O)2], (IV) (Hökelek et al., 2009c), [Zn2(DENA)2(C7H5O3)4].2H2O, (V) (Hökelek & Necefoğlu, 1996) and [Zn(C8H8NO2)2(C6H6N2O)2].H2O, (VI) (Hökelek et al., 2009d) have also been reported. In (II), the two benzoate ions are coordinated to the Cd atom as bidentate ligands. In the other structures one of the benzoate ligands acts as a bidentate ligand, while the other is monodentate ligand.
In the title compound (Fig. 1), the average Cd—O bond length (Table 1) is 2.3371 (11) Å and the Cd atom is displaced out of the least-squares planes of the carboxylate groups (O1/C1/O2) and (O3/C9/O4) by 0.2697 (1) Å and 0.0105 (1) Å, respectively. The dihedral angle between the planar carboxylate groups and the adjacent benzene rings A (C2—C7) and B (C10—C15) are 10.28 (11)° and 21.24 (9)°, respectively, while those between rings A, B, C (N1/C17—C21) and D (N3/C23—C27) are A/B = 6.90 (4), A/C = 63.11 (5), A/D = 76.86 (4), B/C = 62.69 (5), B/D = 83.75 (4) and C/D = 88.64 (4) °. The intramolecular O—H···O hydrogen bonds (Table 2) link the water molecules to the carboxylate groups (O1/C1/O2) and (O3/C9/O4). In (I), the O3—Cd1—O4 angle is 54.71 (4)°. The corresponding O—M—O (where M is a metal) angles are 52.91 (4)° and 53.96 (4)° in (II), 60.70 (4)° in (III), 58.45 (9)° in (IV), 58.3 (3)° in (V), 60.03 (6)° in (VI) and 55.2 (1)° in [Cu(Asp)2(py)2] (where Asp is acetylsalicylate and py is pyridine) [(VII); Greenaway et al., 1984].
In the crystal structure, intramolecular O—H···O and intermolecular O—H···O and N—H···O hydrogen bonds (Table 2) link the molecules into a supramolecular structure, in which they may be effective in the stabilization of the structure. The π–π contact between the benzene rings, Cg1—Cg2i, [symmetry code (i): 1 + x, y, z, where Cg1 and Cg2 are the centroids of rings A (C2—C7) and B (C10—C15)] may further stabilize the structure, with centroid-centroid distance of 3.911 (1) Å. There also exists two weak C—H···π interactions involving the pyridine rings C and D (Table 2).