In the centrosymmetric dimeric Cd
II title compound, [Cd
2(C
9H
10NO
2)
4(C
6H
6N
2O)
2(H
2O)
2], each seven-coordinated Cd
II atom is chelated by the carboxylate groups of the two 4-(dimethylamino)benzoate (DMAB) anions; the two monomeric units are bridged through the two O atoms of the two carboxyl groups. In the crystal structure, intermolecular O—H
O, N—H
O and C—H
O hydrogen bonds link the molecules into a three-dimensional network. π–π contacts between the pyridine rings [centroid–centroid distance = 3.974 (1) Å] may further stabilize the structure. Weak C—H
π interactions are also observed.
Supporting information
CCDC reference: 786435
Key indicators
- Single-crystal X-ray study
- T = 100 K
- Mean (C-C) = 0.003 Å
- R factor = 0.022
- wR factor = 0.056
- Data-to-parameter ratio = 17.9
checkCIF/PLATON results
No syntax errors found
Alert level B
PLAT220_ALERT_2_B Large Non-Solvent C Ueq(max)/Ueq(min) ... 4.43 Ratio
PLAT232_ALERT_2_B Hirshfeld Test Diff (M-X) Cd1 -- O3 .. 12.86 su
PLAT232_ALERT_2_B Hirshfeld Test Diff (M-X) Cd1 -- O4 .. 10.93 su
Alert level C
PLAT222_ALERT_3_C Large Non-Solvent H Uiso(max)/Uso(min) ... 5.53 Rati
PLAT232_ALERT_2_C Hirshfeld Test Diff (M-X) Cd1 -- O1 .. 8.74 su
PLAT232_ALERT_2_C Hirshfeld Test Diff (M-X) Cd1 -- O2 .. 6.38 su
PLAT232_ALERT_2_C Hirshfeld Test Diff (M-X) Cd1 -- O4_a .. 7.11 su
PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.600 11
PLAT912_ALERT_4_C Missing # of FCF Reflections Above STh/L= 0.600 41
0 ALERT level A = In general: serious problem
3 ALERT level B = Potentially serious problem
6 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
6 ALERT type 2 Indicator that the structure model may be wrong or deficient
2 ALERT type 3 Indicator that the structure quality may be low
1 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
The title compound was prepared by the reaction of 3CdSO4.H2O (1.28 g, 5 mmol) in H2O (30 ml) and NA (1.22 g, 10 mmol) in H2O (20 ml) with sodium
4-(dimethylamino)benzoate (1.88 g, 10 mmol) in H2O (150 ml). The mixture
was filtered and set aside to crystallize at ambient temperature for one
week, giving colorless single crystals.
Atoms H61 and H62 were located in a difference Fourier map
and refined isotropically. The remaining H atoms were positioned geometrically
with N—H = 0.86 Å (for NH2) and C—H = 0.93 and 0.96 Å for aromatic
and methyl H atoms, respectively, and constrained to ride on their parent
atoms, with Uiso(H) = xUeq(C,N), where x = 1.5
for methyl H and x = 1.2 for all other H atoms.
Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Mercury (Macrae et al., 2006); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 2009).
Bis[µ-4-(dimethylamino)benzoato]-
κ3O,
O':
O;
κ3O:
O,
O'-bis{aqua[4-
(dimethylamino)benzoato-
κ2O,
O'](nicotinamide-
κN1)cadmium(II)}
top
Crystal data top
[Cd2(C9H10NO2)4(C6H6N2O)2(H2O)2] | Z = 1 |
Mr = 1161.83 | F(000) = 592 |
Triclinic, P1 | Dx = 1.655 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 9.5453 (2) Å | Cell parameters from 9880 reflections |
b = 10.2372 (2) Å | θ = 2.4–28.5° |
c = 13.5697 (3) Å | µ = 0.99 mm−1 |
α = 74.102 (3)° | T = 100 K |
β = 79.479 (3)° | Block, colorless |
γ = 66.547 (2)° | 0.36 × 0.24 × 0.13 mm |
V = 1165.85 (5) Å3 | |
Data collection top
Bruker Kappa APEXII CCD area-detector diffractometer | 5862 independent reflections |
Radiation source: fine-focus sealed tube | 5498 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.026 |
ϕ and ω scans | θmax = 28.5°, θmin = 1.6° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −12→12 |
Tmin = 0.752, Tmax = 0.879 | k = −13→13 |
21249 measured reflections | l = −18→18 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.022 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.056 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0271P)2 + 0.7237P] where P = (Fo2 + 2Fc2)/3 |
5862 reflections | (Δ/σ)max < 0.001 |
328 parameters | Δρmax = 0.67 e Å−3 |
0 restraints | Δρmin = −0.49 e Å−3 |
Crystal data top
[Cd2(C9H10NO2)4(C6H6N2O)2(H2O)2] | γ = 66.547 (2)° |
Mr = 1161.83 | V = 1165.85 (5) Å3 |
Triclinic, P1 | Z = 1 |
a = 9.5453 (2) Å | Mo Kα radiation |
b = 10.2372 (2) Å | µ = 0.99 mm−1 |
c = 13.5697 (3) Å | T = 100 K |
α = 74.102 (3)° | 0.36 × 0.24 × 0.13 mm |
β = 79.479 (3)° | |
Data collection top
Bruker Kappa APEXII CCD area-detector diffractometer | 5862 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 5498 reflections with I > 2σ(I) |
Tmin = 0.752, Tmax = 0.879 | Rint = 0.026 |
21249 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.022 | 0 restraints |
wR(F2) = 0.056 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | Δρmax = 0.67 e Å−3 |
5862 reflections | Δρmin = −0.49 e Å−3 |
328 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Cd1 | 0.180220 (12) | 0.040917 (12) | 0.492667 (9) | 0.01404 (4) | |
O1 | 0.10108 (14) | 0.14484 (13) | 0.63748 (9) | 0.0207 (2) | |
O2 | 0.33823 (14) | −0.01006 (15) | 0.62185 (10) | 0.0221 (3) | |
O3 | 0.02478 (14) | 0.30555 (14) | 0.40644 (10) | 0.0212 (2) | |
O4 | −0.02665 (13) | 0.11559 (13) | 0.40059 (9) | 0.0189 (2) | |
O5 | 0.35463 (15) | −0.60232 (14) | 0.34334 (13) | 0.0320 (3) | |
O6 | 0.34839 (15) | 0.12770 (14) | 0.37393 (10) | 0.0208 (3) | |
H61 | 0.438 (3) | 0.091 (3) | 0.374 (2) | 0.039 (7)* | |
H62 | 0.331 (3) | 0.215 (3) | 0.364 (2) | 0.042 (7)* | |
N1 | 0.2767 (2) | −0.0371 (2) | 1.10325 (13) | 0.0338 (4) | |
N2 | −0.2931 (2) | 0.5498 (2) | −0.01791 (15) | 0.0481 (6) | |
N3 | 0.32213 (15) | −0.17835 (15) | 0.44145 (11) | 0.0161 (3) | |
N4 | 0.12133 (18) | −0.45388 (19) | 0.38859 (17) | 0.0367 (5) | |
H4A | 0.0796 | −0.5110 | 0.3814 | 0.044* | |
H4B | 0.0655 | −0.3738 | 0.4075 | 0.044* | |
C1 | 0.22674 (19) | 0.06515 (18) | 0.67584 (13) | 0.0172 (3) | |
C2 | 0.24275 (19) | 0.04966 (19) | 0.78525 (13) | 0.0188 (3) | |
C3 | 0.1236 (2) | 0.1251 (2) | 0.84793 (15) | 0.0297 (4) | |
H3 | 0.0358 | 0.1959 | 0.8188 | 0.036* | |
C4 | 0.1318 (2) | 0.0978 (3) | 0.95279 (15) | 0.0358 (5) | |
H4 | 0.0498 | 0.1506 | 0.9925 | 0.043* | |
C5 | 0.2614 (2) | −0.0079 (2) | 1.00013 (14) | 0.0241 (4) | |
C6 | 0.3803 (2) | −0.0844 (3) | 0.93693 (17) | 0.0432 (6) | |
H6 | 0.4680 | −0.1559 | 0.9658 | 0.052* | |
C7 | 0.3707 (2) | −0.0565 (3) | 0.83278 (17) | 0.0414 (6) | |
H7 | 0.4520 | −0.1101 | 0.7930 | 0.050* | |
C8 | 0.1518 (3) | 0.0277 (3) | 1.17494 (18) | 0.0522 (7) | |
H8A | 0.1926 | 0.0409 | 1.2296 | 0.078* | |
H8B | 0.0955 | −0.0355 | 1.2029 | 0.078* | |
H8C | 0.0849 | 0.1207 | 1.1397 | 0.078* | |
C9 | 0.4091 (3) | −0.1524 (3) | 1.14836 (17) | 0.0412 (5) | |
H9A | 0.4063 | −0.1499 | 1.2189 | 0.062* | |
H9B | 0.5002 | −0.1395 | 1.1114 | 0.062* | |
H9C | 0.4092 | −0.2449 | 1.1449 | 0.062* | |
C10 | −0.04015 (17) | 0.25041 (18) | 0.36627 (13) | 0.0164 (3) | |
C11 | −0.12533 (19) | 0.33661 (18) | 0.27396 (13) | 0.0188 (3) | |
C12 | −0.1946 (2) | 0.2771 (2) | 0.22633 (16) | 0.0303 (4) | |
H12 | −0.2022 | 0.1873 | 0.2590 | 0.036* | |
C13 | −0.2528 (3) | 0.3473 (3) | 0.13181 (18) | 0.0400 (5) | |
H13 | −0.2986 | 0.3040 | 0.1022 | 0.048* | |
C14 | −0.2439 (2) | 0.4826 (3) | 0.07997 (16) | 0.0353 (5) | |
C15 | −0.1832 (2) | 0.5474 (2) | 0.13103 (16) | 0.0316 (4) | |
H15 | −0.1824 | 0.6404 | 0.1010 | 0.038* | |
C16 | −0.1245 (2) | 0.4756 (2) | 0.22524 (14) | 0.0231 (4) | |
H16 | −0.0835 | 0.5207 | 0.2569 | 0.028* | |
C17 | −0.2400 (3) | 0.6651 (4) | −0.07824 (19) | 0.0612 (9) | |
H17A | −0.2756 | 0.6970 | −0.1457 | 0.092* | |
H17B | −0.1300 | 0.6285 | −0.0838 | 0.092* | |
H17C | −0.2792 | 0.7458 | −0.0451 | 0.092* | |
C18 | −0.3162 (4) | 0.4603 (4) | −0.0761 (2) | 0.0700 (11) | |
H18A | −0.3484 | 0.5187 | −0.1424 | 0.105* | |
H18B | −0.3935 | 0.4231 | −0.0396 | 0.105* | |
H18C | −0.2219 | 0.3802 | −0.0846 | 0.105* | |
C19 | 0.25695 (18) | −0.26001 (17) | 0.41870 (12) | 0.0158 (3) | |
H19 | 0.1506 | −0.2288 | 0.4251 | 0.019* | |
C20 | 0.34143 (18) | −0.38911 (17) | 0.38596 (13) | 0.0160 (3) | |
C21 | 0.50027 (19) | −0.43196 (18) | 0.37210 (14) | 0.0192 (3) | |
H21 | 0.5599 | −0.5158 | 0.3479 | 0.023* | |
C22 | 0.56831 (19) | −0.34787 (18) | 0.39492 (14) | 0.0200 (3) | |
H22 | 0.6742 | −0.3742 | 0.3861 | 0.024* | |
C23 | 0.47585 (18) | −0.22380 (18) | 0.43116 (13) | 0.0183 (3) | |
H23 | 0.5221 | −0.1699 | 0.4491 | 0.022* | |
C24 | 0.27089 (19) | −0.48910 (18) | 0.37050 (13) | 0.0180 (3) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Cd1 | 0.00975 (6) | 0.01423 (6) | 0.01936 (7) | −0.00424 (4) | −0.00041 (4) | −0.00645 (4) |
O1 | 0.0180 (6) | 0.0199 (6) | 0.0216 (6) | −0.0039 (5) | −0.0013 (5) | −0.0055 (5) |
O2 | 0.0146 (6) | 0.0317 (7) | 0.0235 (6) | −0.0076 (5) | 0.0011 (5) | −0.0147 (5) |
O3 | 0.0175 (6) | 0.0234 (6) | 0.0251 (6) | −0.0106 (5) | −0.0027 (5) | −0.0038 (5) |
O4 | 0.0146 (5) | 0.0156 (5) | 0.0242 (6) | −0.0040 (4) | −0.0016 (5) | −0.0032 (5) |
O5 | 0.0226 (7) | 0.0207 (6) | 0.0575 (10) | −0.0107 (5) | 0.0111 (6) | −0.0216 (6) |
O6 | 0.0140 (6) | 0.0149 (6) | 0.0319 (7) | −0.0055 (5) | 0.0024 (5) | −0.0054 (5) |
N1 | 0.0317 (9) | 0.0417 (10) | 0.0189 (8) | −0.0081 (8) | 0.0012 (7) | −0.0031 (7) |
N2 | 0.0338 (10) | 0.0590 (14) | 0.0280 (10) | 0.0090 (9) | −0.0135 (8) | −0.0055 (9) |
N3 | 0.0130 (6) | 0.0142 (6) | 0.0208 (7) | −0.0052 (5) | 0.0000 (5) | −0.0043 (5) |
N4 | 0.0140 (7) | 0.0274 (8) | 0.0800 (14) | −0.0064 (6) | 0.0000 (8) | −0.0343 (9) |
C1 | 0.0168 (7) | 0.0183 (7) | 0.0206 (8) | −0.0100 (6) | 0.0016 (6) | −0.0075 (6) |
C2 | 0.0173 (8) | 0.0225 (8) | 0.0199 (8) | −0.0098 (7) | 0.0013 (6) | −0.0077 (6) |
C3 | 0.0241 (9) | 0.0290 (10) | 0.0219 (9) | 0.0031 (8) | 0.0010 (7) | −0.0050 (7) |
C4 | 0.0273 (10) | 0.0416 (12) | 0.0205 (9) | 0.0025 (9) | 0.0055 (8) | −0.0067 (8) |
C5 | 0.0227 (9) | 0.0290 (9) | 0.0204 (8) | −0.0116 (7) | 0.0015 (7) | −0.0040 (7) |
C6 | 0.0231 (10) | 0.0654 (16) | 0.0308 (11) | 0.0066 (10) | −0.0103 (8) | −0.0243 (11) |
C7 | 0.0182 (9) | 0.0676 (16) | 0.0304 (11) | 0.0054 (10) | −0.0056 (8) | −0.0284 (11) |
C8 | 0.0413 (14) | 0.0785 (19) | 0.0211 (10) | −0.0141 (13) | 0.0112 (9) | −0.0075 (11) |
C9 | 0.0452 (13) | 0.0485 (13) | 0.0272 (10) | −0.0092 (11) | −0.0155 (9) | −0.0083 (10) |
C10 | 0.0094 (7) | 0.0177 (7) | 0.0194 (8) | −0.0030 (6) | 0.0010 (6) | −0.0045 (6) |
C11 | 0.0132 (7) | 0.0172 (7) | 0.0217 (8) | 0.0000 (6) | −0.0023 (6) | −0.0054 (6) |
C12 | 0.0327 (10) | 0.0223 (9) | 0.0367 (11) | −0.0064 (8) | −0.0141 (8) | −0.0060 (8) |
C13 | 0.0404 (12) | 0.0380 (12) | 0.0417 (12) | −0.0030 (10) | −0.0223 (10) | −0.0141 (10) |
C14 | 0.0227 (9) | 0.0399 (11) | 0.0263 (10) | 0.0078 (8) | −0.0082 (8) | −0.0061 (8) |
C15 | 0.0222 (9) | 0.0298 (10) | 0.0290 (10) | −0.0014 (8) | −0.0015 (8) | 0.0023 (8) |
C16 | 0.0169 (8) | 0.0226 (8) | 0.0262 (9) | −0.0050 (7) | −0.0004 (7) | −0.0039 (7) |
C17 | 0.0276 (12) | 0.083 (2) | 0.0278 (12) | 0.0100 (12) | −0.0016 (9) | 0.0126 (12) |
C18 | 0.0556 (17) | 0.085 (2) | 0.0421 (15) | 0.0227 (16) | −0.0289 (13) | −0.0291 (15) |
C19 | 0.0124 (7) | 0.0151 (7) | 0.0199 (8) | −0.0058 (6) | 0.0002 (6) | −0.0040 (6) |
C20 | 0.0143 (7) | 0.0138 (7) | 0.0199 (8) | −0.0053 (6) | −0.0002 (6) | −0.0043 (6) |
C21 | 0.0136 (7) | 0.0155 (7) | 0.0257 (8) | −0.0032 (6) | 0.0017 (6) | −0.0058 (6) |
C22 | 0.0106 (7) | 0.0176 (8) | 0.0293 (9) | −0.0042 (6) | 0.0002 (6) | −0.0038 (7) |
C23 | 0.0139 (7) | 0.0169 (7) | 0.0248 (8) | −0.0072 (6) | −0.0011 (6) | −0.0038 (6) |
C24 | 0.0164 (7) | 0.0141 (7) | 0.0236 (8) | −0.0057 (6) | −0.0010 (6) | −0.0045 (6) |
Geometric parameters (Å, º) top
Cd1—O1 | 2.3511 (12) | C8—H8A | 0.9600 |
Cd1—O2 | 2.3362 (12) | C8—H8B | 0.9600 |
Cd1—O3 | 2.5705 (13) | C8—H8C | 0.9600 |
Cd1—O4i | 2.5762 (12) | C9—H9A | 0.9600 |
Cd1—O6 | 2.3170 (12) | C9—H9B | 0.9600 |
Cd1—N3 | 2.3339 (14) | C9—H9C | 0.9600 |
Cd1—C1 | 2.6955 (17) | C11—C10 | 1.485 (2) |
O1—C1 | 1.262 (2) | C11—C12 | 1.385 (3) |
O2—C1 | 1.278 (2) | C11—C16 | 1.398 (2) |
O3—C10 | 1.253 (2) | C12—C13 | 1.381 (3) |
O4—Cd1 | 2.2849 (12) | C12—H12 | 0.9300 |
O4—Cd1i | 2.5762 (12) | C13—C14 | 1.400 (3) |
O4—C10 | 1.291 (2) | C13—H13 | 0.9300 |
O5—C24 | 1.228 (2) | C14—N2 | 1.388 (3) |
O6—H61 | 0.78 (3) | C15—C14 | 1.400 (3) |
O6—H62 | 0.81 (3) | C15—H15 | 0.9300 |
N1—C5 | 1.371 (2) | C16—C15 | 1.381 (3) |
N1—C8 | 1.452 (3) | C16—H16 | 0.9300 |
N1—C9 | 1.437 (3) | C17—N2 | 1.455 (4) |
N3—C19 | 1.344 (2) | C17—H17A | 0.9600 |
N3—C23 | 1.344 (2) | C17—H17B | 0.9600 |
N4—C24 | 1.319 (2) | C17—H17C | 0.9600 |
N4—H4A | 0.8600 | C18—N2 | 1.460 (4) |
N4—H4B | 0.8600 | C18—H18A | 0.9600 |
C1—C2 | 1.479 (2) | C18—H18B | 0.9600 |
C2—C3 | 1.386 (2) | C18—H18C | 0.9600 |
C2—C7 | 1.391 (3) | C19—C20 | 1.392 (2) |
C3—C4 | 1.384 (3) | C19—H19 | 0.9300 |
C3—H3 | 0.9300 | C20—C21 | 1.392 (2) |
C4—H4 | 0.9300 | C20—C24 | 1.504 (2) |
C5—C4 | 1.399 (3) | C21—C22 | 1.387 (2) |
C5—C6 | 1.394 (3) | C21—H21 | 0.9300 |
C6—C7 | 1.376 (3) | C22—H22 | 0.9300 |
C6—H6 | 0.9300 | C23—C22 | 1.388 (2) |
C7—H7 | 0.9300 | C23—H23 | 0.9300 |
| | | |
O1—Cd1—O3 | 80.40 (4) | C7—C6—C5 | 121.4 (2) |
O1—Cd1—O4i | 81.03 (4) | C7—C6—H6 | 119.3 |
O1—Cd1—C1 | 27.90 (5) | C2—C7—H7 | 119.1 |
O2—Cd1—O1 | 55.96 (4) | C6—C7—C2 | 121.85 (19) |
O2—Cd1—O3 | 121.05 (4) | C6—C7—H7 | 119.1 |
O2—Cd1—O4i | 95.15 (4) | N1—C8—H8A | 109.5 |
O2—Cd1—C1 | 28.30 (5) | N1—C8—H8B | 109.5 |
O3—Cd1—O4i | 116.80 (4) | N1—C8—H8C | 109.5 |
O3—Cd1—C1 | 103.06 (5) | H8A—C8—H8B | 109.5 |
O4—Cd1—O1 | 108.51 (4) | H8A—C8—H8C | 109.5 |
O4—Cd1—O2 | 163.91 (4) | H8B—C8—H8C | 109.5 |
O4—Cd1—O3 | 53.78 (4) | N1—C9—H9A | 109.5 |
O4—Cd1—O4i | 76.87 (4) | N1—C9—H9B | 109.5 |
O4—Cd1—O6 | 102.15 (5) | N1—C9—H9C | 109.5 |
O4—Cd1—N3 | 98.43 (5) | H9A—C9—H9B | 109.5 |
O4—Cd1—C1 | 135.79 (5) | H9A—C9—H9C | 109.5 |
O4i—Cd1—C1 | 85.18 (4) | H9B—C9—H9C | 109.5 |
O6—Cd1—O1 | 113.98 (5) | O3—C10—O4 | 120.68 (15) |
O6—Cd1—O2 | 89.36 (5) | O3—C10—C11 | 120.28 (15) |
O6—Cd1—O3 | 73.12 (4) | O4—C10—C11 | 118.91 (15) |
O6—Cd1—O4i | 163.97 (4) | C12—C11—C10 | 121.50 (16) |
O6—Cd1—N3 | 84.01 (5) | C12—C11—C16 | 117.17 (17) |
O6—Cd1—C1 | 105.44 (5) | C16—C11—C10 | 120.97 (16) |
N3—Cd1—O1 | 142.57 (5) | C11—C12—H12 | 119.0 |
N3—Cd1—O2 | 93.88 (5) | C13—C12—C11 | 121.9 (2) |
N3—Cd1—O3 | 137.02 (4) | C13—C12—H12 | 119.0 |
N3—Cd1—O4i | 80.34 (4) | C12—C13—C14 | 121.0 (2) |
N3—Cd1—C1 | 118.10 (5) | C12—C13—H13 | 119.5 |
C1—O1—Cd1 | 91.41 (10) | C14—C13—H13 | 119.5 |
C1—O2—Cd1 | 91.67 (10) | N2—C14—C13 | 121.5 (2) |
C10—O3—Cd1 | 85.54 (10) | N2—C14—C15 | 121.4 (2) |
Cd1—O4—Cd1i | 103.13 (4) | C13—C14—C15 | 117.13 (18) |
C10—O4—Cd1 | 97.69 (10) | C14—C15—H15 | 119.4 |
C10—O4—Cd1i | 140.80 (10) | C16—C15—C14 | 121.2 (2) |
Cd1—O6—H61 | 124 (2) | C16—C15—H15 | 119.4 |
Cd1—O6—H62 | 116.2 (19) | C11—C16—H16 | 119.3 |
H61—O6—H62 | 104 (3) | C15—C16—C11 | 121.40 (19) |
C5—N1—C9 | 120.90 (18) | C15—C16—H16 | 119.3 |
C5—N1—C8 | 122.36 (19) | N2—C17—H17A | 109.5 |
C9—N1—C8 | 115.94 (18) | N2—C17—H17B | 109.5 |
C14—N2—C17 | 117.8 (2) | N2—C17—H17C | 109.5 |
C14—N2—C18 | 117.6 (2) | H17A—C17—H17B | 109.5 |
C17—N2—C18 | 115.8 (2) | H17A—C17—H17C | 109.5 |
C19—N3—Cd1 | 122.92 (10) | H17B—C17—H17C | 109.5 |
C23—N3—Cd1 | 119.01 (11) | N2—C18—H18A | 109.5 |
C23—N3—C19 | 118.04 (14) | N2—C18—H18B | 109.5 |
C24—N4—H4A | 120.0 | N2—C18—H18C | 109.5 |
C24—N4—H4B | 120.0 | H18A—C18—H18B | 109.5 |
H4A—N4—H4B | 120.0 | H18A—C18—H18C | 109.5 |
O1—C1—Cd1 | 60.69 (9) | H18B—C18—H18C | 109.5 |
O1—C1—O2 | 119.93 (15) | N3—C19—C20 | 122.96 (14) |
O1—C1—C2 | 120.45 (15) | N3—C19—H19 | 118.5 |
O2—C1—Cd1 | 60.04 (9) | C20—C19—H19 | 118.5 |
O2—C1—C2 | 119.48 (15) | C19—C20—C21 | 118.29 (15) |
C2—C1—Cd1 | 167.27 (11) | C19—C20—C24 | 123.42 (14) |
C3—C2—C1 | 121.73 (16) | C21—C20—C24 | 118.20 (14) |
C3—C2—C7 | 116.93 (17) | C20—C21—H21 | 120.5 |
C7—C2—C1 | 120.76 (16) | C22—C21—C20 | 119.03 (15) |
C2—C3—H3 | 119.1 | C22—C21—H21 | 120.5 |
C4—C3—C2 | 121.74 (18) | C21—C22—C23 | 118.92 (15) |
C4—C3—H3 | 119.1 | C21—C22—H22 | 120.5 |
C3—C4—C5 | 121.17 (18) | C23—C22—H22 | 120.5 |
C3—C4—H4 | 119.4 | N3—C23—C22 | 122.66 (15) |
C5—C4—H4 | 119.4 | N3—C23—H23 | 118.7 |
N1—C5—C4 | 123.52 (18) | C22—C23—H23 | 118.7 |
N1—C5—C6 | 119.59 (18) | O5—C24—N4 | 122.03 (16) |
C6—C5—C4 | 116.89 (18) | O5—C24—C20 | 118.99 (15) |
C5—C6—H6 | 119.3 | N4—C24—C20 | 118.97 (15) |
| | | |
O2—Cd1—O1—C1 | −5.81 (9) | Cd1i—O4—Cd1—C1 | −68.68 (7) |
O3—Cd1—O1—C1 | −144.01 (10) | C10—O4—Cd1—O1 | 70.86 (10) |
O4—Cd1—O1—C1 | 169.50 (9) | C10—O4—Cd1—O2 | 85.00 (18) |
O4i—Cd1—O1—C1 | 96.68 (10) | C10—O4—Cd1—O3 | 8.44 (9) |
O6—Cd1—O1—C1 | −77.44 (10) | C10—O4—Cd1—O4i | 146.56 (11) |
N3—Cd1—O1—C1 | 35.73 (13) | C10—O4—Cd1—O6 | −49.84 (10) |
O1—Cd1—O2—C1 | 5.74 (9) | C10—O4—Cd1—N3 | −135.48 (10) |
O3—Cd1—O2—C1 | 55.83 (11) | C10—O4—Cd1—C1 | 77.88 (11) |
O4—Cd1—O2—C1 | −10.5 (2) | Cd1—O4—C10—O3 | −16.40 (16) |
O4i—Cd1—O2—C1 | −69.80 (10) | Cd1i—O4—C10—O3 | 105.49 (18) |
O6—Cd1—O2—C1 | 125.61 (10) | Cd1—O4—C10—C11 | 159.57 (12) |
N3—Cd1—O2—C1 | −150.44 (10) | Cd1i—O4—C10—C11 | −78.5 (2) |
O1—Cd1—O3—C10 | −130.16 (10) | C8—N1—C5—C4 | 7.3 (4) |
O2—Cd1—O3—C10 | −170.30 (9) | C8—N1—C5—C6 | −173.6 (3) |
O4—Cd1—O3—C10 | −8.64 (9) | C9—N1—C5—C4 | 176.6 (2) |
O4i—Cd1—O3—C10 | −55.38 (10) | C9—N1—C5—C6 | −4.3 (3) |
O6—Cd1—O3—C10 | 111.01 (10) | Cd1—N3—C19—C20 | 178.53 (12) |
N3—Cd1—O3—C10 | 50.07 (11) | C23—N3—C19—C20 | 0.5 (2) |
C1—Cd1—O3—C10 | −146.56 (9) | Cd1—N3—C23—C22 | −175.85 (13) |
O1—Cd1—N3—C19 | 104.17 (13) | C19—N3—C23—C22 | 2.3 (2) |
O1—Cd1—N3—C23 | −77.81 (14) | Cd1—C1—C2—C3 | −93.7 (6) |
O2—Cd1—N3—C19 | 137.60 (13) | Cd1—C1—C2—C7 | 77.3 (6) |
O2—Cd1—N3—C23 | −44.39 (13) | O1—C1—C2—C3 | −2.3 (3) |
O3—Cd1—N3—C19 | −76.20 (14) | O1—C1—C2—C7 | 168.71 (19) |
O3—Cd1—N3—C23 | 101.82 (13) | O2—C1—C2—C3 | −177.86 (17) |
O4—Cd1—N3—C19 | −32.01 (13) | O2—C1—C2—C7 | −6.9 (3) |
O4i—Cd1—N3—C19 | 43.03 (12) | C1—C2—C3—C4 | 172.1 (2) |
O4—Cd1—N3—C23 | 146.00 (12) | C7—C2—C3—C4 | 0.8 (3) |
O4i—Cd1—N3—C23 | −138.96 (13) | C1—C2—C7—C6 | −172.4 (2) |
O6—Cd1—N3—C19 | −133.45 (13) | C3—C2—C7—C6 | −1.0 (4) |
O6—Cd1—N3—C23 | 44.56 (12) | C2—C3—C4—C5 | −0.1 (4) |
C1—Cd1—N3—C19 | 122.22 (12) | N1—C5—C4—C3 | 178.6 (2) |
C1—Cd1—N3—C23 | −59.76 (13) | C6—C5—C4—C3 | −0.5 (4) |
O1—Cd1—C1—O2 | −169.81 (16) | N1—C5—C6—C7 | −178.8 (3) |
O1—Cd1—C1—C2 | 98.7 (5) | C4—C5—C6—C7 | 0.4 (4) |
O2—Cd1—C1—O1 | 169.81 (16) | C5—C6—C7—C2 | 0.4 (4) |
O2—Cd1—C1—C2 | −91.5 (5) | C12—C11—C10—O3 | 178.21 (17) |
O3—Cd1—C1—O1 | 36.50 (10) | C12—C11—C10—O4 | 2.2 (2) |
O3—Cd1—C1—O2 | −133.31 (10) | C16—C11—C10—O3 | 5.3 (2) |
O3—Cd1—C1—C2 | 135.2 (5) | C16—C11—C10—O4 | −170.72 (15) |
O4—Cd1—C1—O1 | −14.35 (13) | C10—C11—C12—C13 | −169.52 (19) |
O4i—Cd1—C1—O1 | −79.92 (9) | C16—C11—C12—C13 | 3.7 (3) |
O4—Cd1—C1—O2 | 175.84 (9) | C10—C11—C16—C15 | 170.03 (16) |
O4i—Cd1—C1—O2 | 110.28 (10) | C12—C11—C16—C15 | −3.2 (3) |
O4—Cd1—C1—C2 | 84.4 (5) | C11—C12—C13—C14 | 0.0 (3) |
O4i—Cd1—C1—C2 | 18.8 (5) | C12—C13—C14—N2 | 175.8 (2) |
O6—Cd1—C1—O1 | 112.31 (10) | C12—C13—C14—C15 | −4.1 (3) |
O6—Cd1—C1—O2 | −57.50 (10) | C13—C14—N2—C17 | −162.1 (2) |
O6—Cd1—C1—C2 | −149.0 (5) | C13—C14—N2—C18 | −15.8 (3) |
N3—Cd1—C1—O1 | −156.28 (9) | C15—C14—N2—C17 | 17.8 (3) |
N3—Cd1—C1—O2 | 33.92 (11) | C15—C14—N2—C18 | 164.1 (2) |
N3—Cd1—C1—C2 | −57.5 (5) | C16—C15—C14—N2 | −175.34 (19) |
Cd1—O1—C1—O2 | 10.19 (16) | C16—C15—C14—C13 | 4.6 (3) |
Cd1—O1—C1—C2 | −165.37 (13) | C11—C16—C15—C14 | −1.0 (3) |
Cd1—O2—C1—O1 | −10.26 (16) | N3—C19—C20—C21 | −2.8 (2) |
Cd1—O2—C1—C2 | 165.34 (13) | N3—C19—C20—C24 | 173.63 (15) |
Cd1—O3—C10—O4 | 14.44 (14) | C19—C20—C21—C22 | 2.3 (2) |
Cd1—O3—C10—C11 | −161.46 (14) | C24—C20—C21—C22 | −174.27 (16) |
Cd1i—O4—Cd1—O1 | −75.71 (5) | C19—C20—C24—O5 | −178.59 (17) |
Cd1i—O4—Cd1—O2 | −61.56 (17) | C19—C20—C24—N4 | 0.0 (3) |
Cd1i—O4—Cd1—O3 | −138.13 (6) | C21—C20—C24—O5 | −2.2 (3) |
Cd1i—O4—Cd1—O4i | 0.0 | C21—C20—C24—N4 | 176.46 (18) |
Cd1i—O4—Cd1—O6 | 163.60 (4) | C20—C21—C22—C23 | 0.2 (3) |
Cd1i—O4—Cd1—N3 | 77.95 (5) | N3—C23—C22—C21 | −2.6 (3) |
Symmetry code: (i) −x, −y, −z+1. |
Hydrogen-bond geometry (Å, º) topCg2 and Cg3 are the centroids of the C11–C16 and N3/C19–C23 rings,
respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
N4—H4A···O3ii | 0.86 | 2.07 | 2.893 (2) | 160 |
N4—H4B···O1i | 0.86 | 2.24 | 2.993 (2) | 147 |
O6—H61···O2iii | 0.79 (3) | 1.97 (3) | 2.749 (2) | 176 (2) |
O6—H62···O5iv | 0.82 (3) | 1.91 (3) | 2.703 (2) | 163 (3) |
C19—H19···O1i | 0.93 | 2.44 | 3.302 (2) | 155 |
C23—H23···O2iii | 0.93 | 2.57 | 3.372 (2) | 144 |
C9—H9A···Cg3v | 0.96 | 2.61 | 3.434 (2) | 144 |
C17—H17B···Cg2vi | 0.96 | 2.98 | 3.887 (3) | 159 |
Symmetry codes: (i) −x, −y, −z+1; (ii) x, y−1, z; (iii) −x+1, −y, −z+1; (iv) x, y+1, z; (v) x, y, z+1; (vi) −x, −y+1, −z. |
Experimental details
Crystal data |
Chemical formula | [Cd2(C9H10NO2)4(C6H6N2O)2(H2O)2] |
Mr | 1161.83 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 9.5453 (2), 10.2372 (2), 13.5697 (3) |
α, β, γ (°) | 74.102 (3), 79.479 (3), 66.547 (2) |
V (Å3) | 1165.85 (5) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 0.99 |
Crystal size (mm) | 0.36 × 0.24 × 0.13 |
|
Data collection |
Diffractometer | Bruker Kappa APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.752, 0.879 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 21249, 5862, 5498 |
Rint | 0.026 |
(sin θ/λ)max (Å−1) | 0.671 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.022, 0.056, 1.06 |
No. of reflections | 5862 |
No. of parameters | 328 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.67, −0.49 |
Selected bond lengths (Å) topCd1—O1 | 2.3511 (12) | Cd1—O4i | 2.5762 (12) |
Cd1—O2 | 2.3362 (12) | Cd1—O6 | 2.3170 (12) |
Cd1—O3 | 2.5705 (13) | Cd1—N3 | 2.3339 (14) |
Symmetry code: (i) −x, −y, −z+1. |
Hydrogen-bond geometry (Å, º) topCg2 and Cg3 are the centroids of the C11–C16 and N3/C19–C23 rings,
respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
N4—H4A···O3ii | 0.86 | 2.07 | 2.893 (2) | 160 |
N4—H4B···O1i | 0.86 | 2.24 | 2.993 (2) | 147 |
O6—H61···O2iii | 0.79 (3) | 1.97 (3) | 2.749 (2) | 176 (2) |
O6—H62···O5iv | 0.82 (3) | 1.91 (3) | 2.703 (2) | 163 (3) |
C19—H19···O1i | 0.93 | 2.44 | 3.302 (2) | 155 |
C23—H23···O2iii | 0.93 | 2.57 | 3.372 (2) | 144 |
C9—H9A···Cg3v | 0.96 | 2.61 | 3.434 (2) | 144 |
C17—H17B···Cg2vi | 0.96 | 2.98 | 3.887 (3) | 159 |
Symmetry codes: (i) −x, −y, −z+1; (ii) x, y−1, z; (iii) −x+1, −y, −z+1; (iv) x, y+1, z; (v) x, y, z+1; (vi) −x, −y+1, −z. |
Transition metal complexes with biochemical molecules show interesting physical and/or chemical properties, through which they may find applications in biological systems (Antolini et al., 1982). Some benzoic acid derivatives, such as 4-aminobenzoic acid, have been extensively reported in coordination chemistry, as bifunctional organic ligands, due to the varieties of their coordination modes (Chen & Chen, 2002; Amiraslanov et al., 1979; Hauptmann et al., 2000). Nicotinamide (NA) is one form of niacin. A deficiency of this vitamin leads to loss of copper from the body, known as pellagra disease. Victims of pellagra show unusually high serum and urinary copper levels (Krishnamachari, 1974). The nicotinic acid derivative N,N-Diethylnicotinamide (DENA) is an important respiratory stimulant (Bigoli et al., 1972).
The structure-function-coordination relationships of the arylcarboxylate ion in CdII complexes of benzoic acid derivatives may also change depending on the nature and position of the substituted groups on the benzene ring, the nature of the additional ligand molecule or solvent, and the pH and temperature of synthesis as in Mn(II) complexes (Shnulin et al., 1981; Antsyshkina et al., 1980; Adiwidjaja et al., 1978). When pyridine and its derivatives are used instead of water molecules, the structure is completely different (Catterick et al., 1974). We report herein the synthesis and the structure of the title compound, (I).
The title compound, (I), consists of dimeric units located around a crystallographic symmetry centre and made up of two Cd cations, four 4-(dimethylamino)benzoato (DMAB) anions, two nicotinamide (NA) ligands and two water molecules (Fig. 1). Each Cd(II) unit is chelated by the carboxylate O atoms of the two DMAB anions, and the two monomeric units are bridged through the two oxygen atoms of the two carboxylate groups about an inversion center. The coordination number of each CdII atom is seven. The Cd1···Cd1i distance is 3.8121 (2) Å and O4—Cd1—O4i angle is 76.87 (4)° (symmetry code: (i) -x, -y, 1 - z).
The average Cd—O bond length (Table 1) is 2.4302 (12) Å, and the Cd atom is displaced out of the least-squares planes of the carboxylate groups (O1/C1/O2) and (O3/C10/O4) by 0.4160 (1) and 0.6395 (1) Å, respectively. In (I), the O1—Cd1—O2 and O3—Cd1—O4 angles are 55.96 (4) and 53.78 (4) °, respectively. The corresponding O—M—O (where M is a metal) angles are 52.91 (4)° and 53.96 (4)° in [Cd(C8H5O3)2(C6H6N2O)2(H2O)].H2O (Hökelek et al., 2009a), 60.70 (4)° in [Co(C9H10NO2)2(C6H6N2O)(H2O)2] (Hökelek et al., 2009b), 58.45 (9)° in [Mn(C9H10NO2)2(C6H6N2O)(H2O)2] (Hökelek et al., 2009c), 60.03 (6)° in [Zn(C8H8NO2)2(C6H6N2O)2].H2O (Hökelek et al., 2009 d), 58.3 (3)° in [Zn2(DENA)2(C7H5O3)4].2H2O (Hökelek & Necefoğlu, 1996) and 55.2 (1)° in [Cu(Asp)2(py)2] (where Asp is acetylsalicylate and py is pyridine) (Greenaway et al., 1984).
The dihedral angles between the planar carboxylate groups and the adjacent benzene rings A (C2—C7) and B (C11—C16) are 11.48 (17) and 12.78 (13) °, respectively, while those between rings A, B, C (N3/C19—C23), D (Cd1/O1/O2/C1) and E (Cd1/O3/O4/C10) are A/B = 78.35 (7), A/C = 68.85 (6), B/C = 75.32 (6) and D/E = 61.98 (5)°.
In the crystal structure, intermolecular O—H···O, N—H···O and C—H···O hydrogen bonds (Table 2) link the molecules into a three dimensional network, in which they may be effective in the stabilization of the structure. The π–π contact between the pyridine rings, Cg3—Cg3i [symmetry code: (i) 1 - x, -1 - y, 1 - z, where Cg3 is the centroid of the ring C (N3/C19—C23)] may further stabilize the structure, with centroid-centroid distance of 3.974 (1) Å. There also exist two weak C—H···π interactions (Table 2).