




Supporting information
![]() | Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536810031466/xu5001sup1.cif |
![]() | Structure factor file (CIF format) https://doi.org/10.1107/S1600536810031466/xu5001Isup2.hkl |
CCDC reference: 792317
Key indicators
- Single-crystal X-ray study
- T = 296 K
- Mean
(C-C) = 0.005 Å
- Disorder in main residue
- R factor = 0.041
- wR factor = 0.107
- Data-to-parameter ratio = 13.0
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) ... 3.26 Ratio PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for Cd1 PLAT910_ALERT_3_C Missing # of FCF Reflections Below Th(Min) ..... 1 PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.599 83 PLAT041_ALERT_1_C Calc. and Reported SumFormula Strings Differ ? PLAT042_ALERT_1_C Calc. and Reported MoietyFormula Strings Differ ? PLAT045_ALERT_1_C Calculated and Reported Z Differ by ............ 0.50 Ratio PLAT234_ALERT_4_C Large Hirshfeld Difference C14A -- C15A .. 0.16 Ang.
Alert level G PLAT301_ALERT_3_G Note: Main Residue Disorder ................... 16.00 Perc. PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 7 PLAT154_ALERT_1_G The su's on the Cell Angles are Equal (x 10000) 100 Deg. PLAT302_ALERT_4_G Note: Anion/Solvent Disorder ................... 13.00 Perc. PLAT811_ALERT_5_G No ADDSYM Analysis: Too Many Excluded Atoms .... !
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 8 ALERT level C = Check and explain 5 ALERT level G = General alerts; check 4 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 2 ALERT type 2 Indicator that the structure model may be wrong or deficient 4 ALERT type 3 Indicator that the structure quality may be low 2 ALERT type 4 Improvement, methodology, query or suggestion 1 ALERT type 5 Informative message, check
A mixture of CdCl2 (0.5 mmol, 0.09 g) and 2-propyl-1H-imidazole-4,5-dicarboxylic acid (0.5 mmol, 0.99 g) in 15 ml water was sealed in an autoclave equipped with a Teflon liner (20 ml) and then heated at 433 K for 4 days. Crystals of the title compound were obtained by slow evaporation of the solvent at room temperature.
Water H atoms were located in a difference Fourier map and were allowed to ride on the parent atom, with Uiso(H) = 1.5Ueq(O). Carboxyl H atoms were located in a difference map and refined with distance restraints, Uiso(H) = 1.5Ueq(O). Other H atoms were placed at calculated positions and were treated as riding on parent atoms with C—H = 0.96 (methyl), 0.97 (methylene) and N—H = 0.86 Å, Uiso(H) = 1.2 or 1.5Ueq(C,N). The propyl groups of H3pimda are disordered over two sites with refined occupancies of 0.768 (6):0.232 (6) and 0.642 (8):0.358 (8). C—C distance restraints of disordered components were applied. The O3W water molecule is located close to an inversion center, its occupancy factor was refined to 0.49 (1) and was fixed as 0.5 at the final refinements.
Imidazole-4,5-dicarboxylic acid (H3IDC) has been widely used to coordinate with metal salts to obtain a series of MOFs with different structures and useful properties(Zou et al., 2006; Li et al., 2006; Liu et al., 2004; Sun et al., 2005), 2-propyl-1H-imidazole-4,5-carboxylate(H3pimda) ligand as one derivative of H3IDC with efficient N,O-donors has been used to obtain new metal-organic complexes by our research group, such as poly[diaquabis(5-carboxy-2-propyl-1H-imidazole-4-carboxylato- k3 N3,O4,O5)calcium(II)] (Song et al., 2010), [diaquabis (5-carboxy-2-propyl-1H-imidazole-4-carboxylato-k2N3,O4) manganese(II)]N,N-dimethylformamide (Yan et al., 2010), [Diaquabis(5-carboxy-2-propyl-1H-imidazole-4-carboxylato-k2 N3,O4)nickle(II)]N,N-dimethylformamide disolvate(Li et al., 2010), Diaquabis(4-carboxy-2-propyl-1H-imidazole-5-carboxylato- k2N3,O4)copper(II) N,N-dimethylformamide disolvate (He et al., 2010) and Diaquabis(5-carboxy-2-propyl-1H-imidazole- 4-carboxylato-k2N3,O4)nickle(II) tetrahedrate (Fan et al., 2010). In this paper, we report the structure of a new Cd(II) complex obtained under hydrothermal conditions.
As illustrated in figure 1, the title complex molecule is similar to diaquabis(5-carboxy-2-propyl-1H-imidazole-4-carboxylato- κ2N,O)nickle(II) tetrahedrate (Fan et al. 2010), contains one CdII ion, two mono-deprotonated H2pimda- anions, two coordinated water molecules and 3.5 solvent water molecules. The CdII is six-coordinated by two N,O-bidentate H3pimda anions and two water molecules in a distorted octahedral geometry. the dihedral angle between the two imidazole rings is 75.0 (1) %A. In the crystal structure, the three-dimensional supramolecular framework is stabilized by extensive O—H···O and N—H···O hydrogen bonds involving the free water molecules, the coordinated water molecules, the carboxy O atoms and the protonated N atoms of H3pimda. The propyl groups of H3pimda are disordered over two sets of sites with refined occupiencies of 0.772 (6):0.228 (6) and 0.642 (8):0.358 (8).
For the potential uses and diverse structural types of metal complexes with the imidazole-4,5-dicarboxylate ligand, see: Zou et al. (2006); Li et al. (2006); Liu et al. (2004); Sun et al. (2005). For related structures, see: Yan et al. (2010); Li et al. (2010); Song et al.(2010); He et al. (2010); Fan et al. (2010).
Data collection: APEX2 (Bruker, 2004); cell refinement: SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
![]() | Fig. 1. The structure of the title compound, showing the atomic-numbering scheme. Non-H atoms are shown with 30% probability displacement ellipsoids. |
[Cd(C8H9N2O4)2(H2O)2]·3.5H2O | Z = 2 |
Mr = 605.83 | F(000) = 618 |
Triclinic, P1 | Dx = 1.584 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 10.6228 (12) Å | Cell parameters from 3600 reflections |
b = 10.7000 (12) Å | θ = 1.4–25.0° |
c = 11.3694 (13) Å | µ = 0.93 mm−1 |
α = 83.690 (1)° | T = 296 K |
β = 81.701 (1)° | Block, colorless |
γ = 87.441 (1)° | 0.29 × 0.24 × 0.21 mm |
V = 1270.5 (2) Å3 |
Bruker APEXII area-detector diffractometer | 4494 independent reflections |
Radiation source: fine-focus sealed tube | 3730 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.034 |
φ and ω scan | θmax = 25.2°, θmin = 1.9° |
Absorption correction: multi-scan (SADABS; Bruker, 2004) | h = −12→12 |
Tmin = 0.775, Tmax = 0.829 | k = −12→8 |
6589 measured reflections | l = −13→13 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.041 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.107 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0505P)2 + 0.1685P] where P = (Fo2 + 2Fc2)/3 |
4494 reflections | (Δ/σ)max = 0.001 |
346 parameters | Δρmax = 0.46 e Å−3 |
7 restraints | Δρmin = −0.59 e Å−3 |
[Cd(C8H9N2O4)2(H2O)2]·3.5H2O | γ = 87.441 (1)° |
Mr = 605.83 | V = 1270.5 (2) Å3 |
Triclinic, P1 | Z = 2 |
a = 10.6228 (12) Å | Mo Kα radiation |
b = 10.7000 (12) Å | µ = 0.93 mm−1 |
c = 11.3694 (13) Å | T = 296 K |
α = 83.690 (1)° | 0.29 × 0.24 × 0.21 mm |
β = 81.701 (1)° |
Bruker APEXII area-detector diffractometer | 4494 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2004) | 3730 reflections with I > 2σ(I) |
Tmin = 0.775, Tmax = 0.829 | Rint = 0.034 |
6589 measured reflections |
R[F2 > 2σ(F2)] = 0.041 | 7 restraints |
wR(F2) = 0.107 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | Δρmax = 0.46 e Å−3 |
4494 reflections | Δρmin = −0.59 e Å−3 |
346 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cd1 | 0.84023 (3) | 0.29169 (3) | 0.19976 (2) | 0.04816 (13) | |
O1 | 0.8778 (4) | −0.1913 (3) | 0.5186 (3) | 0.0698 (9) | |
O2 | 0.8413 (3) | −0.1136 (3) | 0.6913 (3) | 0.0701 (9) | |
O3 | 0.8810 (3) | 0.0754 (3) | 0.1940 (2) | 0.0565 (7) | |
O4 | 0.8944 (3) | −0.1083 (3) | 0.3037 (3) | 0.0656 (8) | |
O5 | 0.7595 (3) | 0.5000 (3) | 0.2111 (3) | 0.0553 (7) | |
O6 | 0.5964 (3) | 0.6304 (3) | 0.1835 (3) | 0.0660 (8) | |
O7 | 0.3809 (3) | 0.6208 (3) | 0.1350 (3) | 0.0604 (8) | |
O8 | 0.2516 (3) | 0.4784 (3) | 0.0948 (3) | 0.0606 (8) | |
N1 | 0.8262 (3) | 0.2015 (3) | 0.3933 (3) | 0.0454 (7) | |
N2 | 0.8116 (3) | 0.1310 (3) | 0.5823 (3) | 0.0550 (9) | |
H2 | 0.8009 | 0.1302 | 0.6588 | 0.066* | |
N3 | 0.6294 (3) | 0.2956 (3) | 0.1734 (3) | 0.0438 (7) | |
N4 | 0.4358 (3) | 0.2862 (3) | 0.1287 (3) | 0.0479 (8) | |
H4 | 0.3681 | 0.2556 | 0.1112 | 0.058* | |
C1 | 0.8362 (3) | 0.0280 (4) | 0.5209 (3) | 0.0447 (9) | |
C2 | 0.8454 (3) | 0.0742 (3) | 0.4021 (3) | 0.0395 (8) | |
C3 | 0.8069 (5) | 0.2337 (4) | 0.5040 (4) | 0.0591 (11) | |
C4 | 0.8760 (4) | 0.0090 (4) | 0.2913 (3) | 0.0473 (9) | |
C5 | 0.8512 (4) | −0.0992 (4) | 0.5834 (4) | 0.0517 (10) | |
C6A | 0.7979 (9) | 0.3683 (10) | 0.5325 (10) | 0.085 (3) | 0.772 (6) |
H6A | 0.8215 | 0.3717 | 0.6114 | 0.102* | 0.772 (6) |
H6B | 0.8579 | 0.4174 | 0.4753 | 0.102* | 0.772 (6) |
C7A | 0.6674 (9) | 0.4249 (7) | 0.5292 (8) | 0.107 (3) | 0.772 (6) |
H7A | 0.6091 | 0.3854 | 0.5949 | 0.128* | 0.772 (6) |
H7B | 0.6379 | 0.4108 | 0.4550 | 0.128* | 0.772 (6) |
C8A | 0.6699 (11) | 0.5651 (7) | 0.5390 (9) | 0.129 (4) | 0.772 (6) |
H8A | 0.5848 | 0.5970 | 0.5604 | 0.193* | 0.772 (6) |
H8B | 0.7059 | 0.6073 | 0.4635 | 0.193* | 0.772 (6) |
H8C | 0.7207 | 0.5796 | 0.5992 | 0.193* | 0.772 (6) |
C6B | 0.740 (4) | 0.350 (4) | 0.549 (4) | 0.085 (3) | 0.228 (6) |
H6C | 0.6751 | 0.3816 | 0.5002 | 0.102* | 0.228 (6) |
H6D | 0.6998 | 0.3328 | 0.6313 | 0.102* | 0.228 (6) |
C7B | 0.844 (3) | 0.442 (3) | 0.540 (3) | 0.107 (3) | 0.228 (6) |
H7C | 0.8078 | 0.5259 | 0.5500 | 0.128* | 0.228 (6) |
H7D | 0.8951 | 0.4445 | 0.4616 | 0.128* | 0.228 (6) |
C8B | 0.924 (3) | 0.399 (3) | 0.637 (3) | 0.129 (4) | 0.228 (6) |
H8D | 0.9722 | 0.4679 | 0.6515 | 0.193* | 0.228 (6) |
H8E | 0.9808 | 0.3317 | 0.6117 | 0.193* | 0.228 (6) |
H8F | 0.8695 | 0.3699 | 0.7086 | 0.193* | 0.228 (6) |
C9 | 0.5736 (3) | 0.4138 (3) | 0.1688 (3) | 0.0397 (8) | |
C10 | 0.4529 (3) | 0.4099 (4) | 0.1405 (3) | 0.0413 (8) | |
C11 | 0.5431 (4) | 0.2209 (4) | 0.1490 (4) | 0.0509 (10) | |
C12 | 0.6485 (4) | 0.5201 (4) | 0.1898 (3) | 0.0470 (9) | |
C13 | 0.3529 (4) | 0.5090 (4) | 0.1221 (3) | 0.0481 (9) | |
C14A | 0.5509 (17) | 0.0797 (5) | 0.1655 (9) | 0.061 (3) | 0.642 (8) |
H14A | 0.6361 | 0.0508 | 0.1353 | 0.073* | 0.642 (8) |
H14B | 0.4918 | 0.0464 | 0.1201 | 0.073* | 0.642 (8) |
C15A | 0.5189 (11) | 0.0302 (8) | 0.2979 (9) | 0.081 (3) | 0.642 (8) |
H15A | 0.5740 | 0.0680 | 0.3443 | 0.098* | 0.642 (8) |
H15B | 0.4315 | 0.0537 | 0.3267 | 0.098* | 0.642 (8) |
C16A | 0.5361 (10) | −0.1097 (8) | 0.3138 (11) | 0.108 (4) | 0.642 (8) |
H16A | 0.5605 | −0.1354 | 0.3912 | 0.161* | 0.642 (8) |
H16B | 0.6013 | −0.1358 | 0.2531 | 0.161* | 0.642 (8) |
H16C | 0.4576 | −0.1479 | 0.3075 | 0.161* | 0.642 (8) |
C14B | 0.572 (3) | 0.0878 (9) | 0.119 (2) | 0.061 (3) | 0.358 (8) |
H14C | 0.6611 | 0.0664 | 0.1216 | 0.073* | 0.358 (8) |
H14D | 0.5526 | 0.0790 | 0.0400 | 0.073* | 0.358 (8) |
C15B | 0.4893 (14) | 0.0002 (15) | 0.2123 (14) | 0.081 (3) | 0.358 (8) |
H15C | 0.4005 | 0.0244 | 0.2101 | 0.098* | 0.358 (8) |
H15D | 0.5017 | −0.0851 | 0.1905 | 0.098* | 0.358 (8) |
C16B | 0.518 (3) | 0.002 (2) | 0.3363 (17) | 0.108 (4) | 0.358 (8) |
H16D | 0.4796 | −0.0688 | 0.3859 | 0.161* | 0.358 (8) |
H16E | 0.4832 | 0.0784 | 0.3669 | 0.161* | 0.358 (8) |
H16F | 0.6080 | −0.0025 | 0.3363 | 0.161* | 0.358 (8) |
O1W | 0.8927 (3) | 0.3292 (4) | 0.0015 (3) | 0.0955 (13) | |
H1W | 0.9095 | 0.2617 | −0.0314 | 0.143* | |
H2W | 0.8569 | 0.3905 | −0.0363 | 0.143* | |
O2W | 1.0419 (3) | 0.3400 (4) | 0.2218 (3) | 0.0897 (12) | |
H3W | 1.0847 | 0.4010 | 0.1869 | 0.135* | |
H4W | 1.0911 | 0.2778 | 0.2405 | 0.135* | |
O3W | 0.9149 (6) | 0.0145 (6) | 0.9607 (5) | 0.0625 (15) | 0.50 |
H5W | 0.9951 | 0.0020 | 0.9528 | 0.094* | 0.50 |
H6W | 0.9090 | 0.0145 | 1.0360 | 0.094* | 0.50 |
O4W | 0.7737 (5) | 0.1534 (4) | 0.8233 (3) | 0.1211 (17) | |
H7W | 0.8269 | 0.1083 | 0.8598 | 0.182* | |
H8W | 0.7288 | 0.2197 | 0.8353 | 0.182* | |
O5W | 0.1097 (3) | 0.2735 (3) | 0.8678 (3) | 0.0718 (9) | |
H9W | 0.1608 | 0.3312 | 0.8299 | 0.108* | |
H10W | 0.1151 | 0.2123 | 0.8255 | 0.108* | |
O6W | 0.2598 (4) | 0.1582 (4) | 0.0406 (4) | 0.1044 (13) | |
H11W | 0.2130 | 0.0949 | 0.0534 | 0.157* | |
H12W | 0.2045 | 0.2161 | 0.0283 | 0.157* | |
H1 | 0.876 (8) | −0.162 (7) | 0.449 (2) | 0.157* | |
H7 | 0.453 (3) | 0.632 (7) | 0.149 (7) | 0.157* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cd1 | 0.04170 (18) | 0.0518 (2) | 0.0479 (2) | 0.00347 (13) | −0.00891 (12) | 0.01025 (13) |
O1 | 0.091 (2) | 0.0495 (19) | 0.067 (2) | −0.0007 (16) | −0.0173 (19) | 0.0084 (16) |
O2 | 0.070 (2) | 0.079 (2) | 0.0510 (19) | 0.0116 (17) | −0.0047 (15) | 0.0254 (15) |
O3 | 0.0718 (19) | 0.0587 (18) | 0.0362 (15) | 0.0191 (14) | −0.0077 (13) | −0.0008 (13) |
O4 | 0.096 (2) | 0.0453 (18) | 0.0579 (18) | 0.0127 (16) | −0.0199 (16) | −0.0092 (14) |
O5 | 0.0471 (16) | 0.0495 (17) | 0.0723 (19) | −0.0052 (13) | −0.0187 (14) | −0.0049 (14) |
O6 | 0.0647 (19) | 0.0398 (17) | 0.096 (2) | 0.0045 (14) | −0.0164 (17) | −0.0127 (16) |
O7 | 0.0518 (17) | 0.0510 (18) | 0.077 (2) | 0.0153 (14) | −0.0098 (15) | −0.0072 (15) |
O8 | 0.0370 (15) | 0.069 (2) | 0.071 (2) | 0.0022 (13) | −0.0108 (13) | 0.0172 (15) |
N1 | 0.0490 (18) | 0.0434 (19) | 0.0429 (18) | 0.0051 (14) | −0.0080 (14) | −0.0005 (14) |
N2 | 0.063 (2) | 0.064 (2) | 0.0355 (17) | 0.0098 (17) | −0.0058 (15) | −0.0041 (16) |
N3 | 0.0387 (17) | 0.0403 (18) | 0.0517 (19) | 0.0014 (14) | −0.0099 (14) | 0.0012 (14) |
N4 | 0.0384 (17) | 0.050 (2) | 0.055 (2) | −0.0057 (14) | −0.0133 (14) | 0.0032 (15) |
C1 | 0.038 (2) | 0.049 (2) | 0.044 (2) | 0.0000 (16) | −0.0035 (16) | 0.0043 (18) |
C2 | 0.0334 (18) | 0.044 (2) | 0.041 (2) | 0.0010 (15) | −0.0074 (15) | −0.0007 (16) |
C3 | 0.076 (3) | 0.053 (3) | 0.050 (3) | 0.009 (2) | −0.014 (2) | −0.006 (2) |
C4 | 0.047 (2) | 0.050 (2) | 0.045 (2) | 0.0074 (17) | −0.0120 (17) | −0.0020 (18) |
C5 | 0.043 (2) | 0.061 (3) | 0.047 (2) | 0.0004 (18) | −0.0083 (18) | 0.014 (2) |
C6A | 0.109 (9) | 0.068 (5) | 0.078 (5) | 0.011 (6) | −0.009 (6) | −0.021 (4) |
C7A | 0.133 (8) | 0.069 (5) | 0.115 (7) | 0.011 (5) | −0.004 (5) | −0.017 (5) |
C8A | 0.174 (10) | 0.067 (5) | 0.136 (8) | 0.020 (5) | 0.006 (7) | −0.012 (5) |
C6B | 0.109 (9) | 0.068 (5) | 0.078 (5) | 0.011 (6) | −0.009 (6) | −0.021 (4) |
C7B | 0.133 (8) | 0.069 (5) | 0.115 (7) | 0.011 (5) | −0.004 (5) | −0.017 (5) |
C8B | 0.174 (10) | 0.067 (5) | 0.136 (8) | 0.020 (5) | 0.006 (7) | −0.012 (5) |
C9 | 0.0391 (19) | 0.039 (2) | 0.0383 (19) | 0.0003 (15) | −0.0029 (15) | 0.0024 (15) |
C10 | 0.039 (2) | 0.044 (2) | 0.0378 (19) | −0.0004 (16) | 0.0002 (15) | 0.0032 (16) |
C11 | 0.048 (2) | 0.043 (2) | 0.061 (3) | −0.0025 (18) | −0.0127 (19) | 0.0029 (19) |
C12 | 0.048 (2) | 0.046 (2) | 0.047 (2) | 0.0007 (18) | −0.0077 (17) | −0.0012 (17) |
C13 | 0.041 (2) | 0.056 (3) | 0.040 (2) | 0.0088 (18) | 0.0033 (16) | 0.0075 (18) |
C14A | 0.061 (7) | 0.036 (3) | 0.087 (9) | −0.006 (3) | −0.022 (7) | 0.007 (4) |
C15A | 0.062 (5) | 0.058 (5) | 0.121 (8) | −0.003 (4) | −0.028 (5) | 0.023 (5) |
C16A | 0.101 (7) | 0.059 (5) | 0.157 (10) | −0.007 (5) | −0.023 (6) | 0.023 (6) |
C14B | 0.061 (7) | 0.036 (3) | 0.087 (9) | −0.006 (3) | −0.022 (7) | 0.007 (4) |
C15B | 0.062 (5) | 0.058 (5) | 0.121 (8) | −0.003 (4) | −0.028 (5) | 0.023 (5) |
C16B | 0.101 (7) | 0.059 (5) | 0.157 (10) | −0.007 (5) | −0.023 (6) | 0.023 (6) |
O1W | 0.085 (3) | 0.121 (3) | 0.059 (2) | 0.052 (2) | 0.0107 (18) | 0.035 (2) |
O2W | 0.0499 (19) | 0.100 (3) | 0.110 (3) | −0.0224 (18) | −0.0251 (18) | 0.057 (2) |
O3W | 0.065 (4) | 0.075 (4) | 0.048 (3) | 0.008 (3) | −0.007 (3) | −0.013 (3) |
O4W | 0.156 (4) | 0.142 (4) | 0.072 (2) | 0.058 (3) | −0.030 (3) | −0.048 (3) |
O5W | 0.0623 (19) | 0.069 (2) | 0.084 (2) | −0.0175 (16) | 0.0083 (16) | −0.0255 (17) |
O6W | 0.101 (3) | 0.098 (3) | 0.131 (4) | −0.001 (2) | −0.064 (3) | −0.025 (3) |
Cd1—O1W | 2.238 (3) | C6B—H6D | 0.9700 |
Cd1—O2W | 2.281 (3) | C7B—C8B | 1.512 (14) |
Cd1—N1 | 2.290 (3) | C7B—H7C | 0.9700 |
Cd1—N3 | 2.300 (3) | C7B—H7D | 0.9700 |
Cd1—O3 | 2.341 (3) | C8B—H8D | 0.9600 |
Cd1—O5 | 2.362 (3) | C8B—H8E | 0.9600 |
O1—C5 | 1.291 (5) | C8B—H8F | 0.9600 |
O1—H1 | 0.82 (3) | C9—C10 | 1.370 (5) |
O2—C5 | 1.209 (5) | C9—C12 | 1.476 (5) |
O3—C4 | 1.243 (5) | C10—C13 | 1.487 (5) |
O4—C4 | 1.257 (5) | C11—C14A | 1.502 (7) |
O5—C12 | 1.243 (5) | C11—C14B | 1.507 (9) |
O6—C12 | 1.280 (5) | C14A—C15A | 1.534 (12) |
O7—C13 | 1.275 (5) | C14A—H14A | 0.9700 |
O7—H7 | 0.82 (4) | C14A—H14B | 0.9700 |
O8—C13 | 1.229 (5) | C15A—C16A | 1.495 (10) |
N1—C3 | 1.327 (5) | C15A—H15A | 0.9700 |
N1—C2 | 1.363 (5) | C15A—H15B | 0.9700 |
N2—C3 | 1.341 (5) | C16A—H16A | 0.9600 |
N2—C1 | 1.364 (5) | C16A—H16B | 0.9600 |
N2—H2 | 0.8600 | C16A—H16C | 0.9600 |
N3—C11 | 1.320 (5) | C14B—C15B | 1.532 (14) |
N3—C9 | 1.371 (5) | C14B—H14C | 0.9700 |
N4—C11 | 1.346 (5) | C14B—H14D | 0.9700 |
N4—C10 | 1.368 (5) | C15B—C16B | 1.486 (13) |
N4—H4 | 0.8600 | C15B—H15C | 0.9700 |
C1—C2 | 1.377 (5) | C15B—H15D | 0.9700 |
C1—C5 | 1.478 (6) | C16B—H16D | 0.9600 |
C2—C4 | 1.495 (5) | C16B—H16E | 0.9600 |
C3—C6A | 1.506 (11) | C16B—H16F | 0.9600 |
C3—C6B | 1.51 (4) | O1W—H1W | 0.8499 |
C6A—C7A | 1.492 (12) | O1W—H2W | 0.8500 |
C6A—H6A | 0.9700 | O2W—H3W | 0.8405 |
C6A—H6B | 0.9700 | O2W—H4W | 0.8547 |
C7A—C8A | 1.518 (10) | O3W—H5W | 0.8500 |
C7A—H7A | 0.9700 | O3W—H6W | 0.8501 |
C7A—H7B | 0.9700 | O4W—H7W | 0.8503 |
C8A—H8A | 0.9600 | O4W—H8W | 0.8498 |
C8A—H8B | 0.9600 | O5W—H9W | 0.8741 |
C8A—H8C | 0.9600 | O5W—H10W | 0.8500 |
C6B—C7B | 1.498 (15) | O6W—H11W | 0.8452 |
C6B—H6C | 0.9700 | O6W—H12W | 0.8490 |
O1W—Cd1—O2W | 88.94 (14) | C8B—C7B—H7C | 110.3 |
O1W—Cd1—N1 | 162.70 (12) | C6B—C7B—H7D | 110.3 |
O2W—Cd1—N1 | 85.50 (12) | C8B—C7B—H7D | 110.3 |
O1W—Cd1—N3 | 89.03 (13) | H7C—C7B—H7D | 108.5 |
O2W—Cd1—N3 | 165.95 (12) | C7B—C8B—H8D | 109.5 |
N1—Cd1—N3 | 100.21 (11) | C7B—C8B—H8E | 109.5 |
O1W—Cd1—O3 | 91.83 (12) | H8D—C8B—H8E | 109.5 |
O2W—Cd1—O3 | 96.11 (12) | C7B—C8B—H8F | 109.5 |
N1—Cd1—O3 | 72.55 (10) | H8D—C8B—H8F | 109.5 |
N3—Cd1—O3 | 97.85 (10) | H8E—C8B—H8F | 109.5 |
O1W—Cd1—O5 | 90.99 (12) | C10—C9—N3 | 110.1 (3) |
O2W—Cd1—O5 | 94.05 (12) | C10—C9—C12 | 131.2 (3) |
N1—Cd1—O5 | 105.72 (10) | N3—C9—C12 | 118.6 (3) |
N3—Cd1—O5 | 72.08 (10) | N4—C10—C9 | 105.1 (3) |
O3—Cd1—O5 | 169.50 (10) | N4—C10—C13 | 122.2 (3) |
C5—O1—H1 | 107 (6) | C9—C10—C13 | 132.6 (4) |
C4—O3—Cd1 | 117.3 (2) | N3—C11—N4 | 111.0 (3) |
C12—O5—Cd1 | 115.9 (2) | N3—C11—C14A | 125.1 (8) |
C13—O7—H7 | 118 (6) | N4—C11—C14A | 122.8 (8) |
C3—N1—C2 | 106.7 (3) | N3—C11—C14B | 123.8 (15) |
C3—N1—Cd1 | 140.1 (3) | N4—C11—C14B | 123.8 (16) |
C2—N1—Cd1 | 113.2 (2) | O5—C12—O6 | 122.5 (4) |
C3—N2—C1 | 108.9 (3) | O5—C12—C9 | 119.3 (3) |
C3—N2—H2 | 125.6 | O6—C12—C9 | 118.2 (4) |
C1—N2—H2 | 125.6 | O8—C13—O7 | 125.1 (4) |
C11—N3—C9 | 105.6 (3) | O8—C13—C10 | 118.7 (4) |
C11—N3—Cd1 | 140.3 (3) | O7—C13—C10 | 116.2 (4) |
C9—N3—Cd1 | 113.7 (2) | C11—C14A—C15A | 110.9 (6) |
C11—N4—C10 | 108.1 (3) | C11—C14A—H14A | 109.5 |
C11—N4—H4 | 125.9 | C15A—C14A—H14A | 109.5 |
C10—N4—H4 | 125.9 | C11—C14A—H14B | 109.5 |
N2—C1—C2 | 105.1 (3) | C15A—C14A—H14B | 109.5 |
N2—C1—C5 | 121.4 (4) | H14A—C14A—H14B | 108.0 |
C2—C1—C5 | 133.4 (4) | C16A—C15A—C14A | 110.3 (8) |
N1—C2—C1 | 109.3 (3) | C16A—C15A—H15A | 109.6 |
N1—C2—C4 | 119.8 (3) | C14A—C15A—H15A | 109.6 |
C1—C2—C4 | 130.8 (4) | C16A—C15A—H15B | 109.6 |
N1—C3—N2 | 110.0 (4) | C14A—C15A—H15B | 109.6 |
N1—C3—C6A | 123.2 (6) | H15A—C15A—H15B | 108.1 |
N2—C3—C6A | 126.4 (6) | C11—C14B—C15B | 108.1 (13) |
N1—C3—C6B | 129 (2) | C11—C14B—H14C | 110.1 |
N2—C3—C6B | 117.6 (18) | C15B—C14B—H14C | 110.1 |
O3—C4—O4 | 125.2 (4) | C11—C14B—H14D | 110.1 |
O3—C4—C2 | 117.2 (4) | C15B—C14B—H14D | 110.1 |
O4—C4—C2 | 117.6 (3) | H14C—C14B—H14D | 108.4 |
O2—C5—O1 | 122.4 (4) | C16B—C15B—C14B | 113.8 (19) |
O2—C5—C1 | 119.9 (4) | C16B—C15B—H15C | 108.8 |
O1—C5—C1 | 117.6 (4) | C14B—C15B—H15C | 108.8 |
C7A—C6A—C3 | 112.3 (8) | C16B—C15B—H15D | 108.8 |
C7A—C6A—H6A | 109.2 | C14B—C15B—H15D | 108.8 |
C3—C6A—H6A | 109.2 | H15C—C15B—H15D | 107.7 |
C7A—C6A—H6B | 109.2 | C15B—C16B—H16D | 109.5 |
C3—C6A—H6B | 109.2 | C15B—C16B—H16E | 109.5 |
H6A—C6A—H6B | 107.9 | H16D—C16B—H16E | 109.5 |
C6A—C7A—C8A | 109.4 (8) | C15B—C16B—H16F | 109.5 |
C6A—C7A—H7A | 109.8 | H16D—C16B—H16F | 109.5 |
C8A—C7A—H7A | 109.8 | H16E—C16B—H16F | 109.5 |
C6A—C7A—H7B | 109.8 | Cd1—O1W—H1W | 112.0 |
C8A—C7A—H7B | 109.8 | Cd1—O1W—H2W | 119.5 |
H7A—C7A—H7B | 108.2 | H1W—O1W—H2W | 118.7 |
C7B—C6B—C3 | 104 (3) | Cd1—O2W—H3W | 127.7 |
C7B—C6B—H6C | 111.0 | Cd1—O2W—H4W | 116.0 |
C3—C6B—H6C | 111.0 | H3W—O2W—H4W | 110.5 |
C7B—C6B—H6D | 111.0 | H5W—O3W—H6W | 92.8 |
C3—C6B—H6D | 111.0 | H7W—O4W—H8W | 136.0 |
H6C—C6B—H6D | 109.0 | H9W—O5W—H10W | 107.5 |
C6B—C7B—C8B | 107 (3) | H11W—O6W—H12W | 100.2 |
C6B—C7B—H7C | 110.3 |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O4W | 0.86 | 1.89 | 2.747 (5) | 172 |
N4—H4···O6W | 0.86 | 1.90 | 2.729 (5) | 161 |
O1—H1···O4 | 0.82 (3) | 1.67 (3) | 2.490 (5) | 172 (7) |
O7—H7···O6 | 0.82 (4) | 1.63 (4) | 2.440 (5) | 171 (8) |
O1W—H1W···O5Wi | 0.85 | 2.27 | 2.654 (5) | 108 |
O1W—H2W···O8ii | 0.85 | 1.90 | 2.737 (5) | 168 |
O2W—H3W···O8iii | 0.84 | 2.08 | 2.852 (5) | 152 |
O2W—H4W···O2iv | 0.86 | 1.99 | 2.818 (5) | 163 |
O3W—H5W···O3iv | 0.85 | 2.19 | 2.794 (7) | 128 |
O3W—H6W···O3v | 0.85 | 1.96 | 2.770 (6) | 160 |
O4W—H7W···O3W | 0.85 | 1.78 | 2.620 (8) | 169 |
O4W—H8W···O7vi | 0.85 | 2.05 | 2.904 (6) | 180 |
O5W—H9W···O5vi | 0.87 | 2.01 | 2.841 (5) | 159 |
O5W—H10W···O4vii | 0.85 | 1.95 | 2.778 (5) | 163 |
O6W—H11W···O3Wvii | 0.85 | 1.87 | 2.679 (8) | 160 |
O6W—H12W···O5Wviii | 0.85 | 2.22 | 2.850 (5) | 130 |
Symmetry codes: (i) x+1, y, z−1; (ii) −x+1, −y+1, −z; (iii) x+1, y, z; (iv) −x+2, −y, −z+1; (v) x, y, z+1; (vi) −x+1, −y+1, −z+1; (vii) −x+1, −y, −z+1; (viii) x, y, z−1. |
Experimental details
Crystal data | |
Chemical formula | [Cd(C8H9N2O4)2(H2O)2]·3.5H2O |
Mr | 605.83 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 296 |
a, b, c (Å) | 10.6228 (12), 10.7000 (12), 11.3694 (13) |
α, β, γ (°) | 83.690 (1), 81.701 (1), 87.441 (1) |
V (Å3) | 1270.5 (2) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.93 |
Crystal size (mm) | 0.29 × 0.24 × 0.21 |
Data collection | |
Diffractometer | Bruker APEXII area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2004) |
Tmin, Tmax | 0.775, 0.829 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6589, 4494, 3730 |
Rint | 0.034 |
(sin θ/λ)max (Å−1) | 0.599 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.041, 0.107, 1.05 |
No. of reflections | 4494 |
No. of parameters | 346 |
No. of restraints | 7 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.46, −0.59 |
Computer programs: APEX2 (Bruker, 2004), SAINT (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O4W | 0.86 | 1.89 | 2.747 (5) | 172 |
N4—H4···O6W | 0.86 | 1.90 | 2.729 (5) | 161 |
O1—H1···O4 | 0.82 (3) | 1.67 (3) | 2.490 (5) | 172 (7) |
O7—H7···O6 | 0.82 (4) | 1.63 (4) | 2.440 (5) | 171 (8) |
O1W—H1W···O5Wi | 0.85 | 2.27 | 2.654 (5) | 108 |
O1W—H2W···O8ii | 0.85 | 1.90 | 2.737 (5) | 168 |
O2W—H3W···O8iii | 0.84 | 2.08 | 2.852 (5) | 152 |
O2W—H4W···O2iv | 0.86 | 1.99 | 2.818 (5) | 163 |
O3W—H5W···O3iv | 0.85 | 2.19 | 2.794 (7) | 128 |
O3W—H6W···O3v | 0.85 | 1.96 | 2.770 (6) | 160 |
O4W—H7W···O3W | 0.85 | 1.78 | 2.620 (8) | 169 |
O4W—H8W···O7vi | 0.85 | 2.05 | 2.904 (6) | 180 |
O5W—H9W···O5vi | 0.87 | 2.01 | 2.841 (5) | 159 |
O5W—H10W···O4vii | 0.85 | 1.95 | 2.778 (5) | 163 |
O6W—H11W···O3Wvii | 0.85 | 1.87 | 2.679 (8) | 160 |
O6W—H12W···O5Wviii | 0.85 | 2.22 | 2.850 (5) | 130 |
Symmetry codes: (i) x+1, y, z−1; (ii) −x+1, −y+1, −z; (iii) x+1, y, z; (iv) −x+2, −y, −z+1; (v) x, y, z+1; (vi) −x+1, −y+1, −z+1; (vii) −x+1, −y, −z+1; (viii) x, y, z−1. |
Imidazole-4,5-dicarboxylic acid (H3IDC) has been widely used to coordinate with metal salts to obtain a series of MOFs with different structures and useful properties(Zou et al., 2006; Li et al., 2006; Liu et al., 2004; Sun et al., 2005), 2-propyl-1H-imidazole-4,5-carboxylate(H3pimda) ligand as one derivative of H3IDC with efficient N,O-donors has been used to obtain new metal-organic complexes by our research group, such as poly[diaquabis(5-carboxy-2-propyl-1H-imidazole-4-carboxylato- k3 N3,O4,O5)calcium(II)] (Song et al., 2010), [diaquabis (5-carboxy-2-propyl-1H-imidazole-4-carboxylato-k2N3,O4) manganese(II)]N,N-dimethylformamide (Yan et al., 2010), [Diaquabis(5-carboxy-2-propyl-1H-imidazole-4-carboxylato-k2 N3,O4)nickle(II)]N,N-dimethylformamide disolvate(Li et al., 2010), Diaquabis(4-carboxy-2-propyl-1H-imidazole-5-carboxylato- k2N3,O4)copper(II) N,N-dimethylformamide disolvate (He et al., 2010) and Diaquabis(5-carboxy-2-propyl-1H-imidazole- 4-carboxylato-k2N3,O4)nickle(II) tetrahedrate (Fan et al., 2010). In this paper, we report the structure of a new Cd(II) complex obtained under hydrothermal conditions.
As illustrated in figure 1, the title complex molecule is similar to diaquabis(5-carboxy-2-propyl-1H-imidazole-4-carboxylato- κ2N,O)nickle(II) tetrahedrate (Fan et al. 2010), contains one CdII ion, two mono-deprotonated H2pimda- anions, two coordinated water molecules and 3.5 solvent water molecules. The CdII is six-coordinated by two N,O-bidentate H3pimda anions and two water molecules in a distorted octahedral geometry. the dihedral angle between the two imidazole rings is 75.0 (1) %A. In the crystal structure, the three-dimensional supramolecular framework is stabilized by extensive O—H···O and N—H···O hydrogen bonds involving the free water molecules, the coordinated water molecules, the carboxy O atoms and the protonated N atoms of H3pimda. The propyl groups of H3pimda are disordered over two sets of sites with refined occupiencies of 0.772 (6):0.228 (6) and 0.642 (8):0.358 (8).