Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S160053681004359X/xu5065sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S160053681004359X/xu5065Isup2.hkl |
CCDC reference: 799731
Key indicators
- Single-crystal X-ray study
- T = 103 K
- Mean (C-C) = 0.003 Å
- R factor = 0.044
- wR factor = 0.114
- Data-to-parameter ratio = 15.5
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT029_ALERT_3_C _diffrn_measured_fraction_theta_full Low ....... 0.97 PLAT431_ALERT_2_C Short Inter HL..A Contact Cl1 .. O4 .. 2.98 Ang. PLAT910_ALERT_3_C Missing # of FCF Reflections Below Th(Min) ..... 6 PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.600 30 PLAT912_ALERT_4_C Missing # of FCF Reflections Above STh/L= 0.600 37
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 5 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 3 ALERT type 3 Indicator that the structure quality may be low 1 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
Commercial isopropyl 4-chloro-3,5-dinitrobenzoate was recrystallized by slow evaporation of methanol solution. Colourless single crystals were formed after several weeks.
H atoms were placed in calculated positions and were allowed to ride on the parent C atoms with C—H distances of 0.95 (aromatic), 0.98 (methyl) and 1.00 Å (methine); Uiso(H) = 1.5Ueq(C) for methyl H atoms and 1.2Ueq(C) for the others.
Isopropyl 4-chloro-3,5-dinitrobenzoate (Fig. 1) is a useful herbicide and fungicide (Akira et al., 1978; Ferenc et al., 1984). It was used as the acid compounds to combat fungal diseases and weeds. We report here the crystal structure of the title compound. Two nitro groups (O3/ N1/O4 and O5/N2/O6) attached at C2 and C4, the ester group (O1/C7/O2) attached at C6 form dihedral angles of 49.4 (1)°, 87.6 (1)° and 9.1 (1)° with the mean plane of the C1-benzene ring, respectively. In the crystal structure, adjacent molecules are linked together by the weak C—H···O hydrogen bonds (Table 1).
For the application of the title compound as a herbicide and fungicide, see: Akira et al. (1978); Ferenc et al. (1984).
Data collection: RAPID-AUTO (Rigaku, 2004); cell refinement: RAPID-AUTO (Rigaku, 2004); data reduction: RAPID-AUTO (Rigaku, 2004); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
Fig. 1. A view of the title compound with the atomic numbering scheme. Displacement ellipsoids were drawn at the 50% probability level. |
C10H9ClN2O6 | Z = 2 |
Mr = 288.64 | F(000) = 296 |
Triclinic, P1 | Dx = 1.586 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 4.703 (2) Å | Cell parameters from 1327 reflections |
b = 10.783 (5) Å | θ = 3.1–27.5° |
c = 12.734 (5) Å | µ = 0.34 mm−1 |
α = 69.483 (12)° | T = 103 K |
β = 87.75 (2)° | Prism, colourless |
γ = 89.61 (2)° | 0.57 × 0.22 × 0.10 mm |
V = 604.3 (5) Å3 |
Rigaku SPIDER diffractometer | 2689 independent reflections |
Radiation source: Rotating Anode | 1756 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.030 |
ω scans | θmax = 27.5°, θmin = 3.8° |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | h = −6→6 |
Tmin = 0.830, Tmax = 0.967 | k = −14→13 |
5643 measured reflections | l = −16→15 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.044 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.114 | H-atom parameters constrained |
S = 1.00 | w = 1/[σ2(Fo2) + (0.0496P)2 + 0.219P] where P = (Fo2 + 2Fc2)/3 |
2689 reflections | (Δ/σ)max < 0.001 |
174 parameters | Δρmax = 0.38 e Å−3 |
0 restraints | Δρmin = −0.27 e Å−3 |
C10H9ClN2O6 | γ = 89.61 (2)° |
Mr = 288.64 | V = 604.3 (5) Å3 |
Triclinic, P1 | Z = 2 |
a = 4.703 (2) Å | Mo Kα radiation |
b = 10.783 (5) Å | µ = 0.34 mm−1 |
c = 12.734 (5) Å | T = 103 K |
α = 69.483 (12)° | 0.57 × 0.22 × 0.10 mm |
β = 87.75 (2)° |
Rigaku SPIDER diffractometer | 2689 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 1756 reflections with I > 2σ(I) |
Tmin = 0.830, Tmax = 0.967 | Rint = 0.030 |
5643 measured reflections |
R[F2 > 2σ(F2)] = 0.044 | 0 restraints |
wR(F2) = 0.114 | H-atom parameters constrained |
S = 1.00 | Δρmax = 0.38 e Å−3 |
2689 reflections | Δρmin = −0.27 e Å−3 |
174 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 1.35262 (13) | 0.43193 (6) | 0.65836 (5) | 0.02487 (18) | |
O1 | 0.4518 (3) | 0.85871 (15) | 0.76139 (13) | 0.0185 (4) | |
O2 | 0.3137 (3) | 0.67501 (15) | 0.90566 (13) | 0.0208 (4) | |
O3 | 1.2776 (4) | 0.83028 (19) | 0.51714 (14) | 0.0338 (5) | |
O4 | 1.1930 (4) | 0.66488 (19) | 0.46231 (15) | 0.0359 (5) | |
O5 | 1.2157 (4) | 0.31097 (18) | 0.93908 (16) | 0.0343 (5) | |
O6 | 0.8756 (4) | 0.24121 (18) | 0.86381 (17) | 0.0364 (5) | |
N1 | 1.1805 (4) | 0.7201 (2) | 0.53094 (17) | 0.0240 (5) | |
N2 | 1.0218 (4) | 0.3277 (2) | 0.87522 (18) | 0.0226 (5) | |
C1 | 0.8350 (5) | 0.7223 (2) | 0.67783 (18) | 0.0170 (5) | |
H1 | 0.7969 | 0.8119 | 0.6342 | 0.020* | |
C2 | 1.0341 (5) | 0.6512 (2) | 0.64011 (18) | 0.0182 (5) | |
C3 | 1.1009 (5) | 0.5203 (2) | 0.7020 (2) | 0.0187 (5) | |
C4 | 0.9569 (5) | 0.4649 (2) | 0.80468 (19) | 0.0170 (5) | |
C5 | 0.7538 (5) | 0.5317 (2) | 0.8453 (2) | 0.0177 (5) | |
H5 | 0.6590 | 0.4898 | 0.9161 | 0.021* | |
C6 | 0.6914 (5) | 0.6612 (2) | 0.78022 (19) | 0.0165 (5) | |
C7 | 0.4638 (5) | 0.7312 (2) | 0.82410 (19) | 0.0160 (5) | |
C8 | 0.2407 (5) | 0.9393 (2) | 0.7970 (2) | 0.0188 (5) | |
H8 | 0.0665 | 0.8848 | 0.8302 | 0.023* | |
C9 | 0.3717 (6) | 0.9834 (3) | 0.8837 (2) | 0.0288 (6) | |
H9A | 0.4320 | 0.9057 | 0.9461 | 0.043* | |
H9B | 0.2316 | 1.0332 | 0.9117 | 0.043* | |
H9C | 0.5372 | 1.0401 | 0.8500 | 0.043* | |
C10 | 0.1679 (6) | 1.0513 (2) | 0.6922 (2) | 0.0290 (6) | |
H10A | 0.3399 | 1.1034 | 0.6591 | 0.043* | |
H10B | 0.0261 | 1.1082 | 0.7108 | 0.043* | |
H10C | 0.0902 | 1.0155 | 0.6383 | 0.043* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0219 (3) | 0.0263 (3) | 0.0289 (3) | 0.0080 (2) | −0.0003 (2) | −0.0129 (3) |
O1 | 0.0203 (9) | 0.0125 (8) | 0.0194 (8) | 0.0043 (6) | 0.0027 (7) | −0.0019 (7) |
O2 | 0.0215 (9) | 0.0166 (8) | 0.0197 (9) | 0.0035 (7) | 0.0035 (7) | −0.0011 (7) |
O3 | 0.0334 (11) | 0.0378 (12) | 0.0238 (10) | −0.0102 (9) | 0.0041 (8) | −0.0030 (9) |
O4 | 0.0432 (12) | 0.0413 (12) | 0.0239 (10) | 0.0147 (9) | 0.0041 (9) | −0.0130 (9) |
O5 | 0.0284 (11) | 0.0266 (10) | 0.0409 (11) | 0.0075 (8) | −0.0108 (9) | −0.0020 (9) |
O6 | 0.0382 (12) | 0.0172 (9) | 0.0545 (13) | −0.0016 (8) | −0.0044 (10) | −0.0131 (9) |
N1 | 0.0205 (11) | 0.0307 (12) | 0.0175 (10) | 0.0076 (9) | −0.0001 (8) | −0.0049 (9) |
N2 | 0.0201 (11) | 0.0172 (11) | 0.0291 (11) | 0.0044 (8) | 0.0030 (9) | −0.0068 (9) |
C1 | 0.0176 (12) | 0.0161 (12) | 0.0170 (12) | 0.0022 (9) | −0.0039 (9) | −0.0050 (10) |
C2 | 0.0174 (12) | 0.0212 (12) | 0.0155 (12) | 0.0012 (9) | −0.0005 (9) | −0.0057 (10) |
C3 | 0.0149 (11) | 0.0200 (12) | 0.0248 (13) | 0.0037 (9) | −0.0022 (10) | −0.0122 (10) |
C4 | 0.0172 (12) | 0.0125 (11) | 0.0210 (12) | 0.0014 (9) | −0.0049 (9) | −0.0049 (9) |
C5 | 0.0182 (12) | 0.0155 (12) | 0.0193 (12) | 0.0002 (9) | 0.0000 (9) | −0.0059 (10) |
C6 | 0.0155 (11) | 0.0169 (11) | 0.0184 (12) | −0.0007 (9) | −0.0007 (9) | −0.0078 (10) |
C7 | 0.0183 (12) | 0.0128 (11) | 0.0162 (11) | 0.0021 (9) | −0.0039 (9) | −0.0041 (9) |
C8 | 0.0190 (12) | 0.0140 (11) | 0.0243 (13) | 0.0043 (9) | 0.0013 (10) | −0.0081 (10) |
C9 | 0.0336 (15) | 0.0229 (14) | 0.0324 (14) | 0.0073 (11) | −0.0029 (12) | −0.0128 (12) |
C10 | 0.0358 (16) | 0.0197 (13) | 0.0272 (14) | 0.0096 (11) | −0.0017 (12) | −0.0029 (11) |
Cl1—C3 | 1.709 (2) | C3—C4 | 1.384 (3) |
O1—C7 | 1.328 (3) | C4—C5 | 1.382 (3) |
O1—C8 | 1.475 (3) | C5—C6 | 1.388 (3) |
O2—C7 | 1.205 (3) | C5—H5 | 0.9500 |
O3—N1 | 1.227 (3) | C6—C7 | 1.505 (3) |
O4—N1 | 1.217 (3) | C8—C9 | 1.500 (3) |
O5—N2 | 1.216 (3) | C8—C10 | 1.503 (3) |
O6—N2 | 1.215 (3) | C8—H8 | 1.0000 |
N1—C2 | 1.472 (3) | C9—H9A | 0.9800 |
N2—C4 | 1.474 (3) | C9—H9B | 0.9800 |
C1—C2 | 1.382 (3) | C9—H9C | 0.9800 |
C1—C6 | 1.388 (3) | C10—H10A | 0.9800 |
C1—H1 | 0.9500 | C10—H10B | 0.9800 |
C2—C3 | 1.395 (3) | C10—H10C | 0.9800 |
C7—O1—C8 | 116.83 (18) | C1—C6—C7 | 121.8 (2) |
O4—N1—O3 | 125.7 (2) | C5—C6—C7 | 117.9 (2) |
O4—N1—C2 | 118.2 (2) | O2—C7—O1 | 125.9 (2) |
O3—N1—C2 | 116.1 (2) | O2—C7—C6 | 122.6 (2) |
O6—N2—O5 | 125.8 (2) | O1—C7—C6 | 111.5 (2) |
O6—N2—C4 | 116.5 (2) | O1—C8—C9 | 107.98 (19) |
O5—N2—C4 | 117.61 (19) | O1—C8—C10 | 105.83 (19) |
C2—C1—C6 | 119.1 (2) | C9—C8—C10 | 113.8 (2) |
C2—C1—H1 | 120.4 | O1—C8—H8 | 109.7 |
C6—C1—H1 | 120.4 | C9—C8—H8 | 109.7 |
C1—C2—C3 | 122.5 (2) | C10—C8—H8 | 109.7 |
C1—C2—N1 | 117.2 (2) | C8—C9—H9A | 109.5 |
C3—C2—N1 | 120.3 (2) | C8—C9—H9B | 109.5 |
C4—C3—C2 | 116.1 (2) | H9A—C9—H9B | 109.5 |
C4—C3—Cl1 | 120.62 (18) | C8—C9—H9C | 109.5 |
C2—C3—Cl1 | 123.26 (19) | H9A—C9—H9C | 109.5 |
C5—C4—C3 | 123.4 (2) | H9B—C9—H9C | 109.5 |
C5—C4—N2 | 117.8 (2) | C8—C10—H10A | 109.5 |
C3—C4—N2 | 118.8 (2) | C8—C10—H10B | 109.5 |
C4—C5—C6 | 118.5 (2) | H10A—C10—H10B | 109.5 |
C4—C5—H5 | 120.7 | C8—C10—H10C | 109.5 |
C6—C5—H5 | 120.7 | H10A—C10—H10C | 109.5 |
C1—C6—C5 | 120.3 (2) | H10B—C10—H10C | 109.5 |
C6—C1—C2—C3 | −1.1 (3) | O6—N2—C4—C3 | −92.1 (3) |
C6—C1—C2—N1 | 179.8 (2) | O5—N2—C4—C3 | 87.7 (3) |
O4—N1—C2—C1 | −131.1 (2) | C3—C4—C5—C6 | −0.3 (3) |
O3—N1—C2—C1 | 48.2 (3) | N2—C4—C5—C6 | 179.6 (2) |
O4—N1—C2—C3 | 49.9 (3) | C2—C1—C6—C5 | 2.0 (3) |
O3—N1—C2—C3 | −130.8 (2) | C2—C1—C6—C7 | −177.5 (2) |
C1—C2—C3—C4 | −0.4 (3) | C4—C5—C6—C1 | −1.3 (3) |
N1—C2—C3—C4 | 178.6 (2) | C4—C5—C6—C7 | 178.3 (2) |
C1—C2—C3—Cl1 | −178.36 (18) | C8—O1—C7—O2 | 1.9 (3) |
N1—C2—C3—Cl1 | 0.6 (3) | C8—O1—C7—C6 | −178.73 (17) |
C2—C3—C4—C5 | 1.2 (3) | C1—C6—C7—O2 | 170.8 (2) |
Cl1—C3—C4—C5 | 179.18 (18) | C5—C6—C7—O2 | −8.8 (3) |
C2—C3—C4—N2 | −178.78 (19) | C1—C6—C7—O1 | −8.7 (3) |
Cl1—C3—C4—N2 | −0.8 (3) | C5—C6—C7—O1 | 171.78 (19) |
O6—N2—C4—C5 | 87.9 (3) | C7—O1—C8—C9 | 84.7 (2) |
O5—N2—C4—C5 | −92.3 (3) | C7—O1—C8—C10 | −153.16 (19) |
D—H···A | D—H | H···A | D···A | D—H···A |
C5—H5···O2i | 0.95 | 2.35 | 3.178 (3) | 146 |
Symmetry code: (i) −x+1, −y+1, −z+2. |
Experimental details
Crystal data | |
Chemical formula | C10H9ClN2O6 |
Mr | 288.64 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 103 |
a, b, c (Å) | 4.703 (2), 10.783 (5), 12.734 (5) |
α, β, γ (°) | 69.483 (12), 87.75 (2), 89.61 (2) |
V (Å3) | 604.3 (5) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.34 |
Crystal size (mm) | 0.57 × 0.22 × 0.10 |
Data collection | |
Diffractometer | Rigaku SPIDER |
Absorption correction | Multi-scan (ABSCOR; Higashi, 1995) |
Tmin, Tmax | 0.830, 0.967 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5643, 2689, 1756 |
Rint | 0.030 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.044, 0.114, 1.00 |
No. of reflections | 2689 |
No. of parameters | 174 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.38, −0.27 |
Computer programs: RAPID-AUTO (Rigaku, 2004), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
C5—H5···O2i | 0.95 | 2.35 | 3.178 (3) | 146 |
Symmetry code: (i) −x+1, −y+1, −z+2. |
Isopropyl 4-chloro-3,5-dinitrobenzoate (Fig. 1) is a useful herbicide and fungicide (Akira et al., 1978; Ferenc et al., 1984). It was used as the acid compounds to combat fungal diseases and weeds. We report here the crystal structure of the title compound. Two nitro groups (O3/ N1/O4 and O5/N2/O6) attached at C2 and C4, the ester group (O1/C7/O2) attached at C6 form dihedral angles of 49.4 (1)°, 87.6 (1)° and 9.1 (1)° with the mean plane of the C1-benzene ring, respectively. In the crystal structure, adjacent molecules are linked together by the weak C—H···O hydrogen bonds (Table 1).