


Supporting information
![]() | Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536812035283/xu5601sup1.cif |
![]() | Structure factor file (CIF format) https://doi.org/10.1107/S1600536812035283/xu5601Isup2.hkl |
CCDC reference: 899583
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean
(C-C) = 0.007 Å
- Disorder in solvent or counterion
- R factor = 0.050
- wR factor = 0.166
- Data-to-parameter ratio = 17.5
checkCIF/PLATON results
No syntax errors found
Alert level B PLAT241_ALERT_2_B Check High Ueq as Compared to Neighbors for N13
Alert level C PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for N9 PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for N10 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C27 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C28 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C29 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C30 PLAT341_ALERT_3_C Low Bond Precision on C-C Bonds ............... 0.0066 Ang PLAT420_ALERT_2_C D-H Without Acceptor N4 - H41 ... ? PLAT420_ALERT_2_C D-H Without Acceptor N8 - H81 ... ? PLAT905_ALERT_3_C Negative K value in the Analysis of Variance ... -1.856 PLAT910_ALERT_3_C Missing # of FCF Reflections Below Th(Min) ..... 1 PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.600 8
Alert level G PLAT003_ALERT_2_G Number of Uiso or Uij Restrained Atom Sites .... 2 PLAT004_ALERT_5_G Info: Polymeric Structure Found with Dimension . 1 PLAT005_ALERT_5_G No _iucr_refine_instructions_details in CIF .... ? PLAT007_ALERT_5_G Note: Number of Unrefined D-H Atoms ............ 8 PLAT042_ALERT_1_G Calc. and Reported MoietyFormula Strings Differ ? PLAT045_ALERT_1_G Calculated and Reported Z Differ by ............ 0.50 Ratio PLAT083_ALERT_2_G SHELXL Second Parameter in WGHT Unusually Large. 9.82 PLAT199_ALERT_1_G Check the Reported _cell_measurement_temperature 293 K PLAT200_ALERT_1_G Check the Reported _diffrn_ambient_temperature 293 K PLAT302_ALERT_4_G Note: Anion/Solvent Disorder ................... 100 Perc. PLAT311_ALERT_2_G Isolated Disordered Oxygen Atom (No H's ?) ..... O1W' PLAT720_ALERT_4_G Number of Unusual/Non-Standard Labels .......... 6 PLAT794_ALERT_5_G Note: Tentative Bond Valency for Cu1 (II) 2.42 PLAT794_ALERT_5_G Note: Tentative Bond Valency for Cu2 (II) 2.41 PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 12 PLAT912_ALERT_4_G Missing # of FCF Reflections Above STh/L= 0.600 4
0 ALERT level A = Most likely a serious problem - resolve or explain 1 ALERT level B = A potentially serious problem, consider carefully 12 ALERT level C = Check. Ensure it is not caused by an omission or oversight 16 ALERT level G = General information/check it is not something unexpected 4 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 12 ALERT type 2 Indicator that the structure model may be wrong or deficient 5 ALERT type 3 Indicator that the structure quality may be low 3 ALERT type 4 Improvement, methodology, query or suggestion 5 ALERT type 5 Informative message, check
A methanol solution (20 ml) of 2-benzoylpyridine semicarbazone (0.240 g,1 mmol) (de Lima et al., 2008), copper acetate monohydrate (0.199 g, 1 mmol) and sodium dicyanamide (0.089 g, 1 mmol) was heated for 5 h. The dark green solid was collected and recrystallized from methanol.
Carbon-bound H-atoms were placed in calculated positions (C–H 0.93 Å) and were included in the refinement in the riding model approximation, with U(H) set to 1.2U(C). The amino H-atoms were similarly treated (N–H 0.88 Å) and their temperature factors tied by a factor of 1.2 times.
Omitted owing interference from the beam stop were (2 1 0), (0 0 2), (1 1 2), (1 1 4) and (1 2 1).
The presence of water was indicated by an infrared spectral measurement. The two independent water molecules are both disordered over two positions; the occupancy could not be refined, and was assumed as a 1:1 type of disorder. For one molecule, the disorder is such that two components are separated by about 2 Å, so that one hydrogen atom should be midway between two oxygen atoms. For the other, the two are separated by about 1 Å, so that one hydrogen atom should be occupying the site of the other oxygen atom. For both, hydrogen atoms were positioned on only one component oxygen atom so that each water molecule forms only one hydrogen bond. Furthermore, the hydrogen atoms were given full occupancy, i.e., hydrogen atoms were not placed on those atoms that do not engage in hydrogen bonding. The temperature factors of the primed atoms were set to those of the unprimed ones, and the anisotropic temperature factors were tightly restrained to be nearly isotropic.
Data collection: APEX2 (Bruker, 2010); cell refinement: SAINT (Bruker, 2010); data reduction: SAINT (Bruker, 2010); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).
[Cu(C13H11N4O)(C2N3)]·H2O | F(000) = 3152 |
Mr = 386.86 | Dx = 1.477 Mg m−3 |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 9967 reflections |
a = 12.3996 (2) Å | θ = 2.7–26.5° |
b = 21.0115 (4) Å | µ = 1.28 mm−1 |
c = 26.7059 (5) Å | T = 293 K |
V = 6957.8 (2) Å3 | Prim, green |
Z = 16 | 0.40 × 0.30 × 0.20 mm |
Bruker Kappa APEXII diffractometer | 7982 independent reflections |
Radiation source: fine-focus sealed tube | 5027 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.054 |
ω scans | θmax = 27.5°, θmin = 1.9° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −16→14 |
Tmin = 0.629, Tmax = 0.784 | k = −27→27 |
110924 measured reflections | l = −34→34 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.050 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.166 | H-atom parameters constrained |
S = 1.12 | w = 1/[σ2(Fo2) + (0.0668P)2 + 9.8211P] where P = (Fo2 + 2Fc2)/3 |
7982 reflections | (Δ/σ)max = 0.001 |
457 parameters | Δρmax = 0.80 e Å−3 |
12 restraints | Δρmin = −0.46 e Å−3 |
[Cu(C13H11N4O)(C2N3)]·H2O | V = 6957.8 (2) Å3 |
Mr = 386.86 | Z = 16 |
Orthorhombic, Pbca | Mo Kα radiation |
a = 12.3996 (2) Å | µ = 1.28 mm−1 |
b = 21.0115 (4) Å | T = 293 K |
c = 26.7059 (5) Å | 0.40 × 0.30 × 0.20 mm |
Bruker Kappa APEXII diffractometer | 7982 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 5027 reflections with I > 2σ(I) |
Tmin = 0.629, Tmax = 0.784 | Rint = 0.054 |
110924 measured reflections |
R[F2 > 2σ(F2)] = 0.050 | 12 restraints |
wR(F2) = 0.166 | H-atom parameters constrained |
S = 1.12 | Δρmax = 0.80 e Å−3 |
7982 reflections | Δρmin = −0.46 e Å−3 |
457 parameters |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cu1 | 0.74889 (4) | 0.32160 (2) | 0.591725 (16) | 0.03950 (15) | |
Cu2 | 0.51236 (4) | 0.06952 (2) | 0.406562 (15) | 0.03717 (15) | |
O1 | 0.6417 (2) | 0.38125 (13) | 0.61888 (10) | 0.0541 (8) | |
O2 | 0.6166 (2) | 0.13248 (12) | 0.38040 (10) | 0.0489 (7) | |
O1W | 0.4729 (16) | 0.4332 (10) | 0.5571 (8) | 0.269 (7) | 0.50 |
H1W1 | 0.5266 | 0.4228 | 0.5745 | 0.404* | |
H1W2 | 0.4808 | 0.4710 | 0.5475 | 0.404* | |
O2W | 0.8427 (16) | 0.1463 (9) | 0.4332 (7) | 0.234 (6) | 0.50 |
H2W1 | 0.7879 | 0.1336 | 0.4177 | 0.280* | |
H2W2 | 0.8367 | 0.1858 | 0.4373 | 0.280* | |
O1W' | 0.4691 (17) | 0.5292 (11) | 0.5296 (8) | 0.269 (7) | 0.50 |
O2W' | 0.7929 (19) | 0.1888 (10) | 0.4402 (8) | 0.234 (6) | 0.50 |
N1 | 0.8834 (3) | 0.26882 (16) | 0.58984 (12) | 0.0469 (8) | |
N2 | 0.7736 (3) | 0.31179 (14) | 0.66329 (11) | 0.0362 (7) | |
N3 | 0.7020 (3) | 0.33965 (15) | 0.69487 (11) | 0.0419 (7) | |
N4 | 0.5629 (3) | 0.41008 (19) | 0.69133 (14) | 0.0644 (11) | |
H41 | 0.5184 | 0.4351 | 0.6749 | 0.077* | |
H42 | 0.5586 | 0.4073 | 0.7241 | 0.077* | |
N5 | 0.3807 (3) | 0.01320 (15) | 0.40768 (10) | 0.0396 (7) | |
N6 | 0.4882 (2) | 0.06112 (14) | 0.33509 (11) | 0.0358 (7) | |
N7 | 0.5555 (3) | 0.09307 (15) | 0.30382 (11) | 0.0394 (7) | |
N8 | 0.6909 (3) | 0.16608 (17) | 0.30793 (13) | 0.0555 (9) | |
H81 | 0.7353 | 0.1909 | 0.3246 | 0.067* | |
H82 | 0.6936 | 0.1649 | 0.2750 | 0.067* | |
N9 | 0.6399 (4) | 0.2399 (2) | 0.58076 (14) | 0.0683 (12) | |
N10 | 0.5250 (4) | 0.1525 (2) | 0.55530 (14) | 0.0735 (13) | |
N11 | 0.5158 (3) | 0.09809 (17) | 0.47568 (12) | 0.0497 (8) | |
N12 | 0.7496 (3) | 0.35269 (18) | 0.52272 (13) | 0.0509 (9) | |
N13 | 0.7622 (4) | 0.3993 (2) | 0.43995 (14) | 0.0799 (15) | |
N14 | 0.8717 (3) | 0.48903 (18) | 0.41363 (13) | 0.0539 (9) | |
C1 | 0.9380 (4) | 0.2496 (2) | 0.54957 (17) | 0.0673 (14) | |
H1 | 0.9131 | 0.2611 | 0.5180 | 0.081* | |
C2 | 1.0297 (5) | 0.2132 (3) | 0.5532 (2) | 0.0814 (18) | |
H2 | 1.0658 | 0.1998 | 0.5246 | 0.098* | |
C3 | 1.0669 (5) | 0.1972 (2) | 0.6000 (2) | 0.0747 (16) | |
H3 | 1.1305 | 0.1741 | 0.6035 | 0.090* | |
C4 | 1.0095 (4) | 0.2154 (2) | 0.64189 (17) | 0.0546 (11) | |
H4 | 1.0326 | 0.2039 | 0.6737 | 0.066* | |
C5 | 0.9172 (3) | 0.25110 (17) | 0.63568 (14) | 0.0419 (9) | |
C6 | 0.8486 (3) | 0.27313 (16) | 0.67749 (13) | 0.0360 (8) | |
C7 | 0.8605 (3) | 0.24717 (17) | 0.72905 (13) | 0.0384 (8) | |
C8 | 0.7886 (4) | 0.2016 (2) | 0.74534 (17) | 0.0546 (11) | |
H8 | 0.7321 | 0.1890 | 0.7247 | 0.066* | |
C9 | 0.8002 (5) | 0.1745 (2) | 0.7924 (2) | 0.0696 (14) | |
H9 | 0.7519 | 0.1436 | 0.8032 | 0.084* | |
C10 | 0.8835 (5) | 0.1935 (3) | 0.82286 (19) | 0.0758 (16) | |
H10 | 0.8909 | 0.1758 | 0.8546 | 0.091* | |
C11 | 0.9552 (5) | 0.2379 (3) | 0.80682 (19) | 0.0831 (17) | |
H11 | 1.0119 | 0.2504 | 0.8275 | 0.100* | |
C12 | 0.9440 (4) | 0.2645 (2) | 0.76020 (17) | 0.0653 (13) | |
H12 | 0.9937 | 0.2947 | 0.7494 | 0.078* | |
C13 | 0.6370 (3) | 0.37643 (18) | 0.66655 (14) | 0.0427 (9) | |
C14 | 0.3281 (4) | −0.0096 (2) | 0.44722 (15) | 0.0527 (11) | |
H14 | 0.3484 | 0.0040 | 0.4790 | 0.063* | |
C15 | 0.2455 (4) | −0.0522 (3) | 0.44297 (19) | 0.0741 (16) | |
H15 | 0.2098 | −0.0671 | 0.4713 | 0.089* | |
C16 | 0.2161 (5) | −0.0725 (3) | 0.3959 (2) | 0.0832 (18) | |
H16 | 0.1602 | −0.1016 | 0.3920 | 0.100* | |
C17 | 0.2703 (4) | −0.0494 (2) | 0.35449 (17) | 0.0626 (13) | |
H17 | 0.2513 | −0.0627 | 0.3225 | 0.075* | |
C18 | 0.3520 (3) | −0.00673 (18) | 0.36126 (13) | 0.0403 (8) | |
C19 | 0.4168 (3) | 0.02092 (17) | 0.32052 (13) | 0.0368 (8) | |
C20 | 0.4045 (3) | −0.00038 (17) | 0.26745 (13) | 0.0369 (8) | |
C21 | 0.3209 (4) | 0.0214 (2) | 0.23788 (15) | 0.0562 (11) | |
H21 | 0.2697 | 0.0492 | 0.2508 | 0.067* | |
C22 | 0.3144 (4) | 0.0011 (3) | 0.18867 (17) | 0.0664 (13) | |
H22 | 0.2580 | 0.0154 | 0.1687 | 0.080* | |
C23 | 0.3888 (4) | −0.0392 (2) | 0.16898 (16) | 0.0644 (14) | |
H23 | 0.3844 | −0.0514 | 0.1356 | 0.077* | |
C24 | 0.4709 (4) | −0.0618 (2) | 0.19901 (19) | 0.0647 (14) | |
H24 | 0.5207 | −0.0906 | 0.1862 | 0.078* | |
C25 | 0.4789 (4) | −0.0417 (2) | 0.24776 (17) | 0.0521 (10) | |
H25 | 0.5354 | −0.0562 | 0.2676 | 0.062* | |
C26 | 0.6197 (3) | 0.13029 (17) | 0.33247 (14) | 0.0409 (9) | |
C27 | 0.5897 (4) | 0.1987 (2) | 0.56680 (14) | 0.0471 (10) | |
C28 | 0.5253 (3) | 0.12554 (19) | 0.51235 (14) | 0.0447 (9) | |
C29 | 0.7585 (3) | 0.3768 (2) | 0.48527 (16) | 0.0483 (10) | |
C30 | 0.8225 (3) | 0.4478 (2) | 0.42797 (13) | 0.0455 (10) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cu1 | 0.0501 (3) | 0.0411 (3) | 0.0272 (2) | −0.00041 (19) | 0.00001 (19) | −0.00053 (18) |
Cu2 | 0.0476 (3) | 0.0394 (3) | 0.0245 (2) | −0.0023 (2) | −0.00390 (18) | −0.00204 (17) |
O1 | 0.070 (2) | 0.0597 (18) | 0.0327 (14) | 0.0195 (15) | −0.0050 (13) | 0.0012 (12) |
O2 | 0.0662 (19) | 0.0471 (16) | 0.0334 (14) | −0.0157 (14) | −0.0080 (13) | −0.0001 (11) |
O1W | 0.220 (9) | 0.323 (11) | 0.266 (10) | 0.038 (8) | −0.025 (8) | −0.002 (8) |
O2W | 0.247 (10) | 0.253 (11) | 0.201 (8) | 0.037 (8) | −0.069 (8) | −0.052 (8) |
O1W' | 0.220 (9) | 0.323 (11) | 0.266 (10) | 0.038 (8) | −0.025 (8) | −0.002 (8) |
O2W' | 0.247 (10) | 0.253 (11) | 0.201 (8) | 0.037 (8) | −0.069 (8) | −0.052 (8) |
N1 | 0.059 (2) | 0.0457 (18) | 0.0354 (17) | 0.0038 (16) | 0.0107 (15) | 0.0022 (14) |
N2 | 0.0452 (18) | 0.0354 (16) | 0.0281 (14) | 0.0019 (14) | −0.0007 (13) | −0.0020 (12) |
N3 | 0.046 (2) | 0.0472 (18) | 0.0323 (16) | 0.0081 (15) | −0.0028 (14) | −0.0045 (14) |
N4 | 0.075 (3) | 0.078 (3) | 0.0401 (19) | 0.036 (2) | 0.0021 (18) | 0.0022 (18) |
N5 | 0.0458 (19) | 0.0448 (17) | 0.0282 (15) | −0.0011 (14) | 0.0010 (13) | 0.0004 (13) |
N6 | 0.0418 (18) | 0.0395 (17) | 0.0261 (14) | −0.0010 (13) | −0.0031 (12) | −0.0002 (12) |
N7 | 0.0487 (19) | 0.0429 (17) | 0.0266 (14) | −0.0060 (15) | −0.0046 (13) | 0.0028 (13) |
N8 | 0.070 (3) | 0.054 (2) | 0.0427 (19) | −0.0245 (19) | −0.0014 (17) | 0.0026 (16) |
N9 | 0.090 (3) | 0.063 (2) | 0.052 (2) | −0.027 (2) | 0.001 (2) | −0.0150 (19) |
N10 | 0.097 (3) | 0.082 (3) | 0.041 (2) | −0.045 (3) | 0.021 (2) | −0.029 (2) |
N11 | 0.062 (2) | 0.055 (2) | 0.0321 (17) | −0.0067 (17) | −0.0025 (15) | −0.0054 (15) |
N12 | 0.058 (2) | 0.056 (2) | 0.0389 (19) | −0.0099 (17) | 0.0001 (16) | 0.0063 (16) |
N13 | 0.100 (3) | 0.096 (3) | 0.043 (2) | −0.056 (3) | −0.028 (2) | 0.030 (2) |
N14 | 0.061 (2) | 0.058 (2) | 0.0425 (19) | −0.0145 (19) | −0.0045 (17) | 0.0155 (16) |
C1 | 0.089 (4) | 0.068 (3) | 0.044 (2) | 0.022 (3) | 0.027 (2) | 0.007 (2) |
C2 | 0.101 (4) | 0.084 (4) | 0.060 (3) | 0.041 (3) | 0.036 (3) | 0.007 (3) |
C3 | 0.079 (4) | 0.069 (3) | 0.076 (4) | 0.035 (3) | 0.031 (3) | 0.011 (3) |
C4 | 0.062 (3) | 0.051 (2) | 0.051 (3) | 0.012 (2) | 0.007 (2) | 0.009 (2) |
C5 | 0.050 (2) | 0.0348 (19) | 0.041 (2) | 0.0007 (17) | 0.0088 (17) | 0.0028 (15) |
C6 | 0.043 (2) | 0.0308 (17) | 0.0345 (18) | −0.0025 (16) | 0.0010 (15) | 0.0002 (14) |
C7 | 0.043 (2) | 0.0394 (19) | 0.0326 (18) | 0.0044 (16) | 0.0035 (16) | 0.0042 (15) |
C8 | 0.062 (3) | 0.047 (2) | 0.056 (3) | −0.007 (2) | 0.004 (2) | 0.005 (2) |
C9 | 0.079 (4) | 0.056 (3) | 0.074 (3) | −0.002 (3) | 0.023 (3) | 0.020 (3) |
C10 | 0.088 (4) | 0.089 (4) | 0.051 (3) | 0.012 (3) | 0.002 (3) | 0.034 (3) |
C11 | 0.081 (4) | 0.121 (5) | 0.048 (3) | −0.013 (4) | −0.019 (3) | 0.025 (3) |
C12 | 0.064 (3) | 0.085 (3) | 0.047 (2) | −0.025 (3) | −0.011 (2) | 0.016 (2) |
C13 | 0.051 (2) | 0.042 (2) | 0.035 (2) | 0.0092 (18) | −0.0012 (17) | −0.0034 (16) |
C14 | 0.059 (3) | 0.065 (3) | 0.033 (2) | −0.002 (2) | 0.0065 (19) | 0.0007 (18) |
C15 | 0.066 (3) | 0.106 (4) | 0.051 (3) | −0.023 (3) | 0.011 (2) | 0.014 (3) |
C16 | 0.071 (4) | 0.118 (5) | 0.061 (3) | −0.043 (3) | −0.003 (3) | 0.013 (3) |
C17 | 0.064 (3) | 0.082 (3) | 0.042 (2) | −0.032 (3) | −0.006 (2) | 0.003 (2) |
C18 | 0.042 (2) | 0.048 (2) | 0.0305 (18) | −0.0046 (17) | −0.0027 (15) | −0.0003 (15) |
C19 | 0.042 (2) | 0.0369 (19) | 0.0314 (18) | −0.0001 (16) | −0.0041 (15) | 0.0008 (14) |
C20 | 0.042 (2) | 0.0375 (19) | 0.0307 (18) | −0.0070 (16) | −0.0029 (15) | −0.0030 (14) |
C21 | 0.059 (3) | 0.071 (3) | 0.038 (2) | 0.011 (2) | −0.011 (2) | −0.008 (2) |
C22 | 0.076 (3) | 0.084 (3) | 0.039 (2) | −0.002 (3) | −0.023 (2) | −0.008 (2) |
C23 | 0.086 (4) | 0.074 (3) | 0.034 (2) | −0.028 (3) | 0.004 (2) | −0.019 (2) |
C24 | 0.071 (3) | 0.055 (3) | 0.069 (3) | −0.007 (2) | 0.020 (3) | −0.032 (2) |
C25 | 0.053 (3) | 0.054 (3) | 0.049 (2) | −0.001 (2) | −0.003 (2) | −0.007 (2) |
C26 | 0.050 (2) | 0.037 (2) | 0.0356 (19) | 0.0002 (17) | −0.0006 (17) | 0.0036 (16) |
C27 | 0.060 (3) | 0.053 (2) | 0.0280 (18) | −0.007 (2) | 0.0055 (18) | −0.0048 (17) |
C28 | 0.052 (2) | 0.049 (2) | 0.033 (2) | −0.0117 (19) | 0.0037 (17) | −0.0062 (17) |
C29 | 0.047 (2) | 0.054 (2) | 0.043 (2) | −0.0148 (19) | −0.0113 (18) | 0.0046 (19) |
C30 | 0.050 (2) | 0.062 (3) | 0.0252 (18) | −0.008 (2) | −0.0133 (17) | 0.0066 (17) |
Cu1—N2 | 1.946 (3) | C1—H1 | 0.9300 |
Cu1—N12 | 1.955 (3) | C2—C3 | 1.376 (7) |
Cu1—O1 | 1.966 (3) | C2—H2 | 0.9300 |
Cu1—N1 | 2.004 (4) | C3—C4 | 1.380 (6) |
Cu1—N9 | 2.205 (4) | C3—H3 | 0.9300 |
Cu2—N6 | 1.940 (3) | C4—C5 | 1.377 (6) |
Cu2—N11 | 1.941 (3) | C4—H4 | 0.9300 |
Cu2—O2 | 1.977 (3) | C5—C6 | 1.479 (5) |
Cu2—N5 | 2.016 (3) | C6—C7 | 1.488 (5) |
Cu2—N14i | 2.228 (4) | C7—C8 | 1.378 (6) |
O1—C13 | 1.278 (4) | C7—C12 | 1.378 (6) |
O2—C26 | 1.281 (4) | C8—C9 | 1.387 (7) |
O1W—H1W1 | 0.8401 | C8—H8 | 0.9300 |
O1W—H1W2 | 0.8401 | C9—C10 | 1.375 (8) |
O2W—H2W1 | 0.8400 | C9—H9 | 0.9300 |
O2W—H2W2 | 0.8400 | C10—C11 | 1.359 (8) |
N1—C1 | 1.333 (5) | C10—H10 | 0.9300 |
N1—C5 | 1.346 (5) | C11—C12 | 1.371 (6) |
N2—C6 | 1.292 (5) | C11—H11 | 0.9300 |
N2—N3 | 1.358 (4) | C12—H12 | 0.9300 |
N3—C13 | 1.349 (5) | C14—C15 | 1.364 (7) |
N4—C13 | 1.334 (5) | C14—H14 | 0.9300 |
N4—H41 | 0.8800 | C15—C16 | 1.377 (7) |
N4—H42 | 0.8800 | C15—H15 | 0.9300 |
N5—C14 | 1.331 (5) | C16—C17 | 1.383 (7) |
N5—C18 | 1.356 (4) | C16—H16 | 0.9300 |
N6—C19 | 1.284 (5) | C17—C18 | 1.365 (6) |
N6—N7 | 1.358 (4) | C17—H17 | 0.9300 |
N7—C26 | 1.353 (5) | C18—C19 | 1.472 (5) |
N8—C26 | 1.332 (5) | C19—C20 | 1.494 (5) |
N8—H81 | 0.8800 | C20—C25 | 1.372 (6) |
N8—H82 | 0.8800 | C20—C21 | 1.381 (6) |
N9—C27 | 1.129 (5) | C21—C22 | 1.384 (6) |
N10—C28 | 1.280 (5) | C21—H21 | 0.9300 |
N10—C27 | 1.296 (6) | C22—C23 | 1.358 (7) |
N11—C28 | 1.143 (5) | C22—H22 | 0.9300 |
N12—C29 | 1.127 (5) | C23—C24 | 1.381 (7) |
N13—C29 | 1.300 (5) | C23—H23 | 0.9300 |
N13—C30 | 1.303 (6) | C24—C25 | 1.372 (6) |
N14—C30 | 1.127 (5) | C24—H24 | 0.9300 |
N14—Cu2ii | 2.228 (4) | C25—H25 | 0.9300 |
C1—C2 | 1.372 (7) | ||
N2—Cu1—N12 | 163.76 (14) | N2—C6—C7 | 125.0 (3) |
N2—Cu1—O1 | 79.14 (12) | C5—C6—C7 | 121.8 (3) |
N12—Cu1—O1 | 97.91 (14) | C8—C7—C12 | 118.6 (4) |
N2—Cu1—N1 | 80.51 (13) | C8—C7—C6 | 118.8 (4) |
N12—Cu1—N1 | 99.07 (14) | C12—C7—C6 | 122.4 (4) |
O1—Cu1—N1 | 157.69 (13) | C7—C8—C9 | 120.3 (5) |
N2—Cu1—N9 | 98.30 (14) | C7—C8—H8 | 119.9 |
N12—Cu1—N9 | 97.91 (15) | C9—C8—H8 | 119.9 |
O1—Cu1—N9 | 97.52 (15) | C10—C9—C8 | 119.6 (5) |
N1—Cu1—N9 | 94.37 (16) | C10—C9—H9 | 120.2 |
N6—Cu2—N11 | 165.22 (14) | C8—C9—H9 | 120.2 |
N6—Cu2—O2 | 79.29 (12) | C11—C10—C9 | 120.3 (4) |
N11—Cu2—O2 | 96.58 (13) | C11—C10—H10 | 119.8 |
N6—Cu2—N5 | 80.58 (12) | C9—C10—H10 | 119.8 |
N11—Cu2—N5 | 100.68 (13) | C10—C11—C12 | 120.0 (5) |
O2—Cu2—N5 | 158.01 (11) | C10—C11—H11 | 120.0 |
N6—Cu2—N14i | 96.54 (13) | C12—C11—H11 | 120.0 |
N11—Cu2—N14i | 98.04 (14) | C11—C12—C7 | 121.1 (4) |
O2—Cu2—N14i | 96.66 (13) | C11—C12—H12 | 119.5 |
N5—Cu2—N14i | 94.34 (14) | C7—C12—H12 | 119.5 |
C13—O1—Cu1 | 110.4 (2) | O1—C13—N4 | 118.9 (4) |
C26—O2—Cu2 | 110.4 (2) | O1—C13—N3 | 125.2 (3) |
H1W1—O1W—H1W2 | 108.7 | N4—C13—N3 | 115.9 (3) |
H2W1—O2W—H2W2 | 107.9 | N5—C14—C15 | 122.6 (4) |
C1—N1—C5 | 119.4 (4) | N5—C14—H14 | 118.7 |
C1—N1—Cu1 | 127.6 (3) | C15—C14—H14 | 118.7 |
C5—N1—Cu1 | 112.9 (3) | C14—C15—C16 | 118.6 (4) |
C6—N2—N3 | 124.0 (3) | C14—C15—H15 | 120.7 |
C6—N2—Cu1 | 117.9 (2) | C16—C15—H15 | 120.7 |
N3—N2—Cu1 | 117.5 (2) | C15—C16—C17 | 119.5 (5) |
C13—N3—N2 | 106.8 (3) | C15—C16—H16 | 120.3 |
C13—N4—H41 | 120.0 | C17—C16—H16 | 120.3 |
C13—N4—H42 | 120.0 | C18—C17—C16 | 119.1 (4) |
H41—N4—H42 | 120.0 | C18—C17—H17 | 120.5 |
C14—N5—C18 | 119.1 (4) | C16—C17—H17 | 120.5 |
C14—N5—Cu2 | 128.3 (3) | N5—C18—C17 | 121.2 (4) |
C18—N5—Cu2 | 112.3 (2) | N5—C18—C19 | 114.2 (3) |
C19—N6—N7 | 124.2 (3) | C17—C18—C19 | 124.5 (3) |
C19—N6—Cu2 | 117.7 (2) | N6—C19—C18 | 114.3 (3) |
N7—N6—Cu2 | 117.7 (2) | N6—C19—C20 | 123.7 (3) |
C26—N7—N6 | 107.4 (3) | C18—C19—C20 | 121.8 (3) |
C26—N8—H81 | 120.0 | C25—C20—C21 | 119.7 (4) |
C26—N8—H82 | 120.0 | C25—C20—C19 | 119.0 (3) |
H81—N8—H82 | 120.0 | C21—C20—C19 | 121.4 (3) |
C27—N9—Cu1 | 168.1 (4) | C20—C21—C22 | 119.0 (4) |
C28—N10—C27 | 122.9 (4) | C20—C21—H21 | 120.5 |
C28—N11—Cu2 | 166.7 (3) | C22—C21—H21 | 120.5 |
C29—N12—Cu1 | 170.9 (4) | C23—C22—C21 | 121.4 (5) |
C29—N13—C30 | 122.2 (4) | C23—C22—H22 | 119.3 |
C30—N14—Cu2ii | 164.2 (3) | C21—C22—H22 | 119.3 |
N1—C1—C2 | 122.2 (5) | C22—C23—C24 | 119.4 (4) |
N1—C1—H1 | 118.9 | C22—C23—H23 | 120.3 |
C2—C1—H1 | 118.9 | C24—C23—H23 | 120.3 |
C1—C2—C3 | 118.5 (4) | C25—C24—C23 | 119.9 (4) |
C1—C2—H2 | 120.7 | C25—C24—H24 | 120.1 |
C3—C2—H2 | 120.7 | C23—C24—H24 | 120.1 |
C2—C3—C4 | 119.7 (5) | C20—C25—C24 | 120.7 (4) |
C2—C3—H3 | 120.1 | C20—C25—H25 | 119.7 |
C4—C3—H3 | 120.1 | C24—C25—H25 | 119.7 |
C5—C4—C3 | 118.8 (4) | O2—C26—N8 | 119.4 (4) |
C5—C4—H4 | 120.6 | O2—C26—N7 | 124.6 (3) |
C3—C4—H4 | 120.6 | N8—C26—N7 | 116.0 (3) |
N1—C5—C4 | 121.2 (4) | N9—C27—N10 | 173.3 (5) |
N1—C5—C6 | 114.9 (3) | N11—C28—N10 | 172.7 (5) |
C4—C5—C6 | 123.9 (4) | N12—C29—N13 | 173.4 (5) |
N2—C6—C5 | 112.9 (3) | N14—C30—N13 | 174.2 (4) |
N2—Cu1—O1—C13 | −7.3 (3) | C3—C4—C5—N1 | −0.8 (7) |
N12—Cu1—O1—C13 | −171.1 (3) | C3—C4—C5—C6 | 179.6 (4) |
N1—Cu1—O1—C13 | −31.8 (5) | N3—N2—C6—C5 | −178.4 (3) |
N9—Cu1—O1—C13 | 89.8 (3) | Cu1—N2—C6—C5 | 10.5 (4) |
N6—Cu2—O2—C26 | −5.6 (3) | N3—N2—C6—C7 | 7.6 (6) |
N11—Cu2—O2—C26 | −171.2 (3) | Cu1—N2—C6—C7 | −163.6 (3) |
N5—Cu2—O2—C26 | −29.6 (5) | N1—C5—C6—N2 | −7.2 (5) |
N14i—Cu2—O2—C26 | 89.9 (3) | C4—C5—C6—N2 | 172.5 (4) |
N2—Cu1—N1—C1 | −178.0 (4) | N1—C5—C6—C7 | 167.1 (3) |
N12—Cu1—N1—C1 | −14.5 (4) | C4—C5—C6—C7 | −13.2 (6) |
O1—Cu1—N1—C1 | −153.6 (4) | N2—C6—C7—C8 | 72.8 (5) |
N9—Cu1—N1—C1 | 84.3 (4) | C5—C6—C7—C8 | −100.8 (5) |
N2—Cu1—N1—C5 | 3.5 (3) | N2—C6—C7—C12 | −110.7 (5) |
N12—Cu1—N1—C5 | 167.1 (3) | C5—C6—C7—C12 | 75.7 (5) |
O1—Cu1—N1—C5 | 28.0 (5) | C12—C7—C8—C9 | 0.6 (7) |
N9—Cu1—N1—C5 | −94.2 (3) | C6—C7—C8—C9 | 177.3 (4) |
N12—Cu1—N2—C6 | −98.0 (5) | C7—C8—C9—C10 | 0.3 (7) |
O1—Cu1—N2—C6 | −178.9 (3) | C8—C9—C10—C11 | −0.9 (9) |
N1—Cu1—N2—C6 | −8.1 (3) | C9—C10—C11—C12 | 0.6 (9) |
N9—Cu1—N2—C6 | 84.9 (3) | C10—C11—C12—C7 | 0.4 (9) |
N12—Cu1—N2—N3 | 90.3 (6) | C8—C7—C12—C11 | −1.0 (8) |
O1—Cu1—N2—N3 | 9.4 (3) | C6—C7—C12—C11 | −177.5 (5) |
N1—Cu1—N2—N3 | −179.8 (3) | Cu1—O1—C13—N4 | −175.2 (3) |
N9—Cu1—N2—N3 | −86.8 (3) | Cu1—O1—C13—N3 | 5.1 (5) |
C6—N2—N3—C13 | 180.0 (3) | N2—N3—C13—O1 | 2.2 (5) |
Cu1—N2—N3—C13 | −8.9 (4) | N2—N3—C13—N4 | −177.5 (4) |
N6—Cu2—N5—C14 | −179.3 (4) | C18—N5—C14—C15 | −0.4 (7) |
N11—Cu2—N5—C14 | −14.2 (4) | Cu2—N5—C14—C15 | −173.8 (4) |
O2—Cu2—N5—C14 | −155.3 (3) | N5—C14—C15—C16 | 0.4 (9) |
N14i—Cu2—N5—C14 | 84.8 (4) | C14—C15—C16—C17 | −0.2 (10) |
N6—Cu2—N5—C18 | 6.9 (3) | C15—C16—C17—C18 | 0.0 (9) |
N11—Cu2—N5—C18 | 172.0 (3) | C14—N5—C18—C17 | 0.2 (6) |
O2—Cu2—N5—C18 | 30.9 (5) | Cu2—N5—C18—C17 | 174.7 (4) |
N14i—Cu2—N5—C18 | −89.0 (3) | C14—N5—C18—C19 | −179.1 (4) |
N11—Cu2—N6—C19 | −104.8 (6) | Cu2—N5—C18—C19 | −4.7 (4) |
O2—Cu2—N6—C19 | −179.8 (3) | C16—C17—C18—N5 | 0.0 (8) |
N5—Cu2—N6—C19 | −8.7 (3) | C16—C17—C18—C19 | 179.2 (5) |
N14i—Cu2—N6—C19 | 84.7 (3) | N7—N6—C19—C18 | −178.9 (3) |
N11—Cu2—N6—N7 | 82.0 (6) | Cu2—N6—C19—C18 | 8.4 (4) |
O2—Cu2—N6—N7 | 7.0 (2) | N7—N6—C19—C20 | 5.5 (6) |
N5—Cu2—N6—N7 | 178.1 (3) | Cu2—N6—C19—C20 | −167.3 (3) |
N14i—Cu2—N6—N7 | −88.5 (3) | N5—C18—C19—N6 | −2.1 (5) |
C19—N6—N7—C26 | −179.3 (3) | C17—C18—C19—N6 | 178.6 (4) |
Cu2—N6—N7—C26 | −6.6 (4) | N5—C18—C19—C20 | 173.7 (3) |
N2—Cu1—N9—C27 | −157 (2) | C17—C18—C19—C20 | −5.7 (6) |
N12—Cu1—N9—C27 | 24 (2) | N6—C19—C20—C25 | 74.0 (5) |
O1—Cu1—N9—C27 | 123 (2) | C18—C19—C20—C25 | −101.3 (4) |
N1—Cu1—N9—C27 | −76 (2) | N6—C19—C20—C21 | −105.0 (5) |
N6—Cu2—N11—C28 | −52.0 (19) | C18—C19—C20—C21 | 79.7 (5) |
O2—Cu2—N11—C28 | 20.8 (16) | C25—C20—C21—C22 | −0.3 (7) |
N5—Cu2—N11—C28 | −145.5 (16) | C19—C20—C21—C22 | 178.7 (4) |
N14i—Cu2—N11—C28 | 118.5 (16) | C20—C21—C22—C23 | −0.5 (8) |
C5—N1—C1—C2 | −1.6 (8) | C21—C22—C23—C24 | 1.8 (8) |
Cu1—N1—C1—C2 | −179.9 (4) | C22—C23—C24—C25 | −2.3 (7) |
N1—C1—C2—C3 | −1.0 (9) | C21—C20—C25—C24 | −0.3 (6) |
C1—C2—C3—C4 | 2.7 (9) | C19—C20—C25—C24 | −179.3 (4) |
C2—C3—C4—C5 | −1.8 (8) | C23—C24—C25—C20 | 1.6 (7) |
C1—N1—C5—C4 | 2.5 (6) | Cu2—O2—C26—N8 | −175.3 (3) |
Cu1—N1—C5—C4 | −179.0 (3) | Cu2—O2—C26—N7 | 4.0 (5) |
C1—N1—C5—C6 | −177.8 (4) | N6—N7—C26—O2 | 1.5 (5) |
Cu1—N1—C5—C6 | 0.7 (4) | N6—N7—C26—N8 | −179.2 (3) |
Symmetry codes: (i) −x+3/2, y−1/2, z; (ii) −x+3/2, y+1/2, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
N4—H42···N7iii | 0.88 | 2.13 | 3.006 (5) | 176 |
N8—H82···N3iv | 0.88 | 2.15 | 3.025 (5) | 179 |
O1w—H1w1···O1 | 0.84 | 2.05 | 2.88 (2) | 169 |
O2w—H2w1···O2 | 0.84 | 2.34 | 3.151 (19) | 161 |
Symmetry codes: (iii) x, −y+1/2, z+1/2; (iv) x, −y+1/2, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | [Cu(C13H11N4O)(C2N3)]·H2O |
Mr | 386.86 |
Crystal system, space group | Orthorhombic, Pbca |
Temperature (K) | 293 |
a, b, c (Å) | 12.3996 (2), 21.0115 (4), 26.7059 (5) |
V (Å3) | 6957.8 (2) |
Z | 16 |
Radiation type | Mo Kα |
µ (mm−1) | 1.28 |
Crystal size (mm) | 0.40 × 0.30 × 0.20 |
Data collection | |
Diffractometer | Bruker Kappa APEXII diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.629, 0.784 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 110924, 7982, 5027 |
Rint | 0.054 |
(sin θ/λ)max (Å−1) | 0.650 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.050, 0.166, 1.12 |
No. of reflections | 7982 |
No. of parameters | 457 |
No. of restraints | 12 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.80, −0.46 |
Computer programs: APEX2 (Bruker, 2010), SAINT (Bruker, 2010), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
N4—H42···N7i | 0.88 | 2.13 | 3.006 (5) | 175.6 |
N8—H82···N3ii | 0.88 | 2.15 | 3.025 (5) | 178.9 |
O1w—H1w1···O1 | 0.84 | 2.05 | 2.88 (2) | 168.9 |
O2w—H2w1···O2 | 0.84 | 2.34 | 3.151 (19) | 161.0 |
Symmetry codes: (i) x, −y+1/2, z+1/2; (ii) x, −y+1/2, z−1/2. |
2-Benzoylpyridine semicarbazone (de Lima et al., 2008) is a Schiff base that is capable of N,N',O-chelation to transition metal ions. This feature has been documented a copper(II) dichloride adduct; in this, the Schiff base exists as a neutral molecule (Peŕez-Rebolledo et al., 2006). However, the CuII atom in the coordination polymer, [Cu(C2N3)(C13H11N4O).H2O]n (I), is N,N',O-chelated instead by the deprotonated Schiff base (Fig. 1). Adjacent metal atoms are bridged by the dicyanamide ion to generate a chain that propagates along the b axis of the orthorhombic unit cell (Fig. 2). The two independent metal atoms show square pyramidal coordination. The two independent water molecules are disordered over two positions; each water molecule is a hydrogen-bond donor to a carbonyl O atom.