A cinnamamide (3-phenylprop-2-enamide) core is present in many pharmacologically active compounds. We report three new crystal structures of
N-substituted cinnamamide derivatives which were screened for anticonvulsant activity, namely (
R,
S)-(2
E)-
N-(2-hydroxypropyl)-3-phenylprop-2-enamide, C
12H
15NO
2, (
1), (
R,
S)-(2
E)-
N-(1-hydroxybutan-2-yl)-3-phenylprop-2-enamide, C
13H
17NO
2, (
2), and (2
E)-1-(4-hydroxypiperidin-1-yl)-3-phenylprop-2-en-1-one, C
14H
17NO
2, (
3). Compounds (
1) and (
2) crystallize in the
Pbca space group with one molecule in the asymmetric unit, whereas compound (
3) crystallizes in the
P2
1/
c space group with two molecules in the asymmetric unit. All the crystal structures are stabilized by intermolecular O—H
O hydrogen bonds and additionally by N—H
O hydrogen bonds in the structures of (
1) and (
2). The investigated compounds possess fragments that are considered as beneficial for anticonvulsant activity. The conformations of these compounds were analyzed in comparison with the characteristic features of the proposed pharmacophore model of anticonvulsants active in the maximal electroshock test,
i.e. a phenyl ring or other hydrophobic unit, an electron-donor atom and a hydrogen-bond acceptor/donor domain. In the reported series, two calculated distances fitted the reference model, while the third did not. Structure–activity analysis suggests that anticonvulsant properties may be related to the N-atom substituent. It is beneficial to combine an electron-donor atom (
e.g. an O atom) with an H atom in the substituent to ensure appropriate interactions with the molecular target. We analyzed the intermolecular interactions in order to find an appropriate spatial arrangement of the important features responsible for anticonvulsant activity.
Supporting information
CCDC references: 1576436; 1576435; 1576434
For all structures, data collection: COLLECT (Bruker, 2004); cell refinement: SCALEPACK (Otwinowski & Minor, 1997); data reduction: DENZO and SCALEPACK (Otwinowski & Minor, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008) and SHELXL2014 (Sheldrick, 2015); molecular graphics: ORTEP-3 (Farrugia, 2012) and Mercury (Macrae et al., 2008); software used to prepare material for publication: publCIF (Westrip, 2010).
(
R,
S)-(2
E)-
N-(2-Hydroxypropyl)-3-phenylprop-2-enamide (1)
top
Crystal data top
C12H15NO2 | F(000) = 880 |
Mr = 205.25 | Dx = 1.276 Mg m−3 |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 6025 reflections |
a = 9.2070 (2) Å | θ = 1.0–27.5° |
b = 8.2100 (2) Å | µ = 0.09 mm−1 |
c = 28.2700 (7) Å | T = 100 K |
V = 2136.91 (9) Å3 | Block, colourless |
Z = 8 | 0.42 × 0.25 × 0.12 mm |
Data collection top
Nonius KappaCCD diffractometer | 2410 independent reflections |
Horizonally mounted graphite crystal monochromator | 2015 reflections with I > 2σ(I) |
Detector resolution: 9 pixels mm-1 | Rint = 0.042 |
CCD scans | θmax = 27.5°, θmin = 3.4° |
Absorption correction: multi-scan (DENZO-SMN; Otwinowski & Minor, 1997) | h = −11→11 |
Tmin = 0.964, Tmax = 0.999 | k = −9→10 |
11825 measured reflections | l = −33→36 |
Refinement top
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.040 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.098 | w = 1/[σ2(Fo2) + (0.0404P)2 + 1.0007P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max = 0.001 |
2410 reflections | Δρmax = 0.30 e Å−3 |
145 parameters | Δρmin = −0.19 e Å−3 |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.77904 (9) | 0.12905 (11) | 0.49081 (3) | 0.0209 (2) | |
C3 | 0.69803 (13) | 0.09672 (15) | 0.58725 (4) | 0.0175 (3) | |
H3 | 0.7867 | 0.0516 | 0.5761 | 0.021* | |
C4 | 0.66250 (13) | 0.06725 (15) | 0.63714 (4) | 0.0173 (3) | |
C9 | 0.53564 (13) | 0.12588 (15) | 0.65889 (4) | 0.0192 (3) | |
H9 | 0.471 | 0.1935 | 0.6416 | 0.023* | |
C1 | 0.65893 (13) | 0.18039 (14) | 0.50514 (4) | 0.0174 (3) | |
C10 | 0.56487 (13) | 0.21472 (15) | 0.42450 (4) | 0.0181 (3) | |
H10A | 0.4654 | 0.2137 | 0.4112 | 0.022* | |
H10B | 0.6101 | 0.1083 | 0.4172 | 0.022* | |
C12 | 0.64733 (15) | 0.32180 (17) | 0.34692 (5) | 0.0240 (3) | |
H12A | 0.5463 | 0.3244 | 0.336 | 0.036* | |
H12B | 0.6903 | 0.2158 | 0.3393 | 0.036* | |
H12C | 0.7025 | 0.4082 | 0.3311 | 0.036* | |
C7 | 0.59699 (14) | −0.01487 (16) | 0.73093 (5) | 0.0226 (3) | |
H7 | 0.5738 | −0.044 | 0.7626 | 0.027* | |
C2 | 0.61930 (13) | 0.17998 (15) | 0.55588 (4) | 0.0186 (3) | |
H2 | 0.5368 | 0.2397 | 0.5662 | 0.022* | |
C11 | 0.65171 (13) | 0.34823 (15) | 0.39992 (4) | 0.0184 (3) | |
H11 | 0.7548 | 0.344 | 0.411 | 0.022* | |
C6 | 0.72354 (15) | −0.07254 (17) | 0.71012 (5) | 0.0234 (3) | |
H6 | 0.7876 | −0.1405 | 0.7276 | 0.028* | |
C5 | 0.75615 (14) | −0.03053 (16) | 0.66370 (4) | 0.0203 (3) | |
H5 | 0.8436 | −0.069 | 0.6498 | 0.024* | |
C8 | 0.50409 (14) | 0.08590 (16) | 0.70529 (5) | 0.0214 (3) | |
H8 | 0.4186 | 0.1274 | 0.7198 | 0.026* | |
N1 | 0.55491 (12) | 0.23163 (13) | 0.47557 (4) | 0.0186 (2) | |
O2 | 0.59293 (10) | 0.50511 (11) | 0.40982 (3) | 0.0224 (2) | |
H1 | 0.4757 (19) | 0.272 (2) | 0.4873 (6) | 0.032 (4)* | |
H2O | 0.637 (2) | 0.541 (2) | 0.4386 (7) | 0.059 (6)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0154 (4) | 0.0259 (5) | 0.0213 (5) | 0.0024 (4) | 0.0016 (3) | −0.0028 (4) |
C3 | 0.0149 (6) | 0.0166 (6) | 0.0210 (6) | −0.0022 (5) | 0.0015 (5) | −0.0030 (5) |
C4 | 0.0180 (6) | 0.0143 (6) | 0.0198 (6) | −0.0036 (5) | −0.0015 (5) | −0.0019 (4) |
C9 | 0.0168 (6) | 0.0188 (6) | 0.0221 (7) | −0.0009 (5) | −0.0025 (5) | −0.0012 (5) |
C1 | 0.0156 (6) | 0.0142 (6) | 0.0223 (7) | −0.0023 (5) | 0.0002 (5) | −0.0012 (5) |
C10 | 0.0165 (6) | 0.0192 (6) | 0.0186 (6) | −0.0006 (5) | −0.0021 (5) | −0.0012 (5) |
C12 | 0.0262 (7) | 0.0269 (7) | 0.0190 (7) | −0.0017 (6) | −0.0004 (5) | −0.0002 (5) |
C7 | 0.0267 (7) | 0.0223 (7) | 0.0187 (6) | −0.0056 (5) | −0.0008 (5) | −0.0006 (5) |
C2 | 0.0157 (6) | 0.0184 (6) | 0.0217 (7) | 0.0005 (5) | 0.0024 (5) | −0.0019 (5) |
C11 | 0.0171 (6) | 0.0179 (6) | 0.0203 (7) | −0.0002 (5) | −0.0013 (5) | −0.0005 (5) |
C6 | 0.0254 (7) | 0.0207 (7) | 0.0241 (7) | 0.0005 (5) | −0.0056 (5) | 0.0010 (5) |
C5 | 0.0193 (6) | 0.0172 (6) | 0.0243 (7) | 0.0001 (5) | −0.0015 (5) | −0.0016 (5) |
C8 | 0.0198 (6) | 0.0225 (7) | 0.0219 (7) | −0.0024 (5) | 0.0015 (5) | −0.0036 (5) |
N1 | 0.0146 (5) | 0.0217 (5) | 0.0196 (6) | 0.0008 (4) | 0.0021 (4) | 0.0000 (4) |
O2 | 0.0242 (5) | 0.0180 (5) | 0.0250 (5) | 0.0018 (4) | −0.0047 (4) | −0.0012 (4) |
Geometric parameters (Å, º) top
O1—C1 | 1.2509 (15) | C12—H12A | 0.98 |
C3—C2 | 1.3338 (18) | C12—H12B | 0.98 |
C3—C4 | 1.4681 (17) | C12—H12C | 0.98 |
C3—H3 | 0.95 | C7—C6 | 1.3884 (19) |
C4—C5 | 1.3969 (17) | C7—C8 | 1.3934 (19) |
C4—C9 | 1.4049 (17) | C7—H7 | 0.95 |
C9—C8 | 1.3831 (18) | C2—H2 | 0.95 |
C9—H9 | 0.95 | C11—O2 | 1.4249 (15) |
C1—N1 | 1.3390 (16) | C11—H11 | 1 |
C1—C2 | 1.4800 (17) | C6—C5 | 1.3899 (18) |
C10—N1 | 1.4533 (16) | C6—H6 | 0.95 |
C10—C11 | 1.5243 (17) | C5—H5 | 0.95 |
C10—H10A | 0.99 | C8—H8 | 0.95 |
C10—H10B | 0.99 | N1—H1 | 0.867 (18) |
C12—C11 | 1.5146 (17) | O2—H2O | 0.96 (2) |
| | | |
C2—C3—C4 | 127.02 (12) | C6—C7—H7 | 120.1 |
C2—C3—H3 | 116.5 | C8—C7—H7 | 120.1 |
C4—C3—H3 | 116.5 | C3—C2—C1 | 120.77 (11) |
C5—C4—C9 | 118.35 (12) | C3—C2—H2 | 119.6 |
C5—C4—C3 | 118.26 (11) | C1—C2—H2 | 119.6 |
C9—C4—C3 | 123.31 (11) | O2—C11—C12 | 108.29 (10) |
C8—C9—C4 | 120.55 (12) | O2—C11—C10 | 111.18 (10) |
C8—C9—H9 | 119.7 | C12—C11—C10 | 109.52 (10) |
C4—C9—H9 | 119.7 | O2—C11—H11 | 109.3 |
O1—C1—N1 | 122.41 (12) | C12—C11—H11 | 109.3 |
O1—C1—C2 | 122.08 (11) | C10—C11—H11 | 109.3 |
N1—C1—C2 | 115.43 (11) | C7—C6—C5 | 119.78 (13) |
N1—C10—C11 | 114.67 (10) | C7—C6—H6 | 120.1 |
N1—C10—H10A | 108.6 | C5—C6—H6 | 120.1 |
C11—C10—H10A | 108.6 | C6—C5—C4 | 121.11 (12) |
N1—C10—H10B | 108.6 | C6—C5—H5 | 119.4 |
C11—C10—H10B | 108.6 | C4—C5—H5 | 119.4 |
H10A—C10—H10B | 107.6 | C9—C8—C7 | 120.36 (12) |
C11—C12—H12A | 109.5 | C9—C8—H8 | 119.8 |
C11—C12—H12B | 109.5 | C7—C8—H8 | 119.8 |
H12A—C12—H12B | 109.5 | C1—N1—C10 | 123.03 (11) |
C11—C12—H12C | 109.5 | C1—N1—H1 | 118.9 (11) |
H12A—C12—H12C | 109.5 | C10—N1—H1 | 117.9 (11) |
H12B—C12—H12C | 109.5 | C11—O2—H2O | 106.7 (12) |
C6—C7—C8 | 119.81 (12) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2O···O1i | 0.96 (2) | 1.81 (2) | 2.769 (1) | 175 (2) |
N1—H1···O1ii | 0.86 (2) | 2.08 (2) | 2.943 (1) | 175 (2) |
C2—H2···O2iii | 0.95 | 2.51 | 3.383 (2) | 154 |
Symmetry codes: (i) −x+3/2, y+1/2, z; (ii) x−1/2, −y+1/2, −z+1; (iii) −x+1, −y+1, −z+1. |
(
R,
S)-(2
E)-
N-(1-Hydroxybutan-2-yl)-3-phenylprop-2-enamide (2)
top
Crystal data top
C13H17NO2 | F(000) = 944 |
Mr = 219.27 | Dx = 1.204 Mg m−3 |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 2905 reflections |
a = 10.6270 (4) Å | θ = 1.0–27.5° |
b = 9.2490 (4) Å | µ = 0.08 mm−1 |
c = 24.6230 (9) Å | T = 100 K |
V = 2420.2 (2) Å3 | Needle, colourless |
Z = 8 | 1.0 × 0.43 × 0.08 mm |
Data collection top
Nonius KappaCCD diffractometer | 2719 independent reflections |
Horizonally mounted graphite crystal monochromator | 2042 reflections with I > 2σ(I) |
Detector resolution: 9 pixels mm-1 | Rint = 0.045 |
CCD scans | θmax = 27.5°, θmin = 2.5° |
Absorption correction: multi-scan (DENZO-SMN; Otwinowski & Minor, 1997) | h = −13→13 |
Tmin = 0.909, Tmax = 0.994 | k = −11→11 |
4834 measured reflections | l = −31→31 |
Refinement top
Refinement on F2 | Hydrogen site location: mixed |
Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
R[F2 > 2σ(F2)] = 0.048 | w = 1/[σ2(Fo2) + (0.0694P)2 + 0.7184P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.137 | (Δ/σ)max < 0.001 |
S = 1.04 | Δρmax = 0.30 e Å−3 |
2719 reflections | Δρmin = −0.21 e Å−3 |
155 parameters | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
0 restraints | Extinction coefficient: 0.0070 (14) |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C9 | 0.71892 (16) | 0.1719 (2) | 0.72466 (7) | 0.0278 (4) | |
H9 | 0.7797 | 0.2169 | 0.702 | 0.033* | |
C8 | 0.70602 (17) | 0.2169 (2) | 0.77805 (7) | 0.0335 (4) | |
H8 | 0.7582 | 0.2921 | 0.7916 | 0.04* | |
C7 | 0.61743 (17) | 0.1529 (2) | 0.81182 (6) | 0.0309 (4) | |
H7 | 0.6089 | 0.1838 | 0.8484 | 0.037* | |
C6 | 0.54178 (16) | 0.0439 (2) | 0.79170 (7) | 0.0304 (4) | |
H6 | 0.4803 | 0.0005 | 0.8145 | 0.036* | |
C5 | 0.55521 (16) | −0.0028 (2) | 0.73816 (6) | 0.0261 (4) | |
H5 | 0.5036 | −0.0789 | 0.7249 | 0.031* | |
C4 | 0.64381 (14) | 0.06129 (19) | 0.70382 (6) | 0.0210 (4) | |
C3 | 0.65472 (14) | 0.00831 (19) | 0.64778 (6) | 0.0203 (4) | |
H3 | 0.6164 | −0.0823 | 0.6402 | 0.024* | |
C2 | 0.71274 (13) | 0.07371 (18) | 0.60623 (6) | 0.0192 (4) | |
H2 | 0.7533 | 0.164 | 0.6118 | 0.023* | |
C1 | 0.71402 (13) | 0.00579 (18) | 0.55145 (6) | 0.0180 (3) | |
O1 | 0.67756 (10) | −0.12149 (12) | 0.54388 (4) | 0.0219 (3) | |
N1 | 0.75602 (12) | 0.08984 (16) | 0.51125 (5) | 0.0190 (3) | |
C10 | 0.75661 (15) | 0.04109 (19) | 0.45428 (6) | 0.0212 (4) | |
H10 | 0.7893 | −0.0602 | 0.4531 | 0.025* | |
C12 | 0.84381 (15) | 0.13639 (19) | 0.42087 (6) | 0.0235 (4) | |
H12A | 0.8185 | 0.2386 | 0.4257 | 0.028* | |
H12B | 0.8334 | 0.1119 | 0.382 | 0.028* | |
C13 | 0.98199 (15) | 0.1209 (2) | 0.43600 (7) | 0.0305 (4) | |
H13A | 0.9949 | 0.1557 | 0.4732 | 0.046* | |
H13B | 1.0334 | 0.1782 | 0.4109 | 0.046* | |
H13C | 1.0066 | 0.019 | 0.4336 | 0.046* | |
C11 | 0.62235 (14) | 0.04163 (19) | 0.43154 (6) | 0.0220 (4) | |
H11A | 0.6231 | 0.0062 | 0.3936 | 0.026* | |
H11B | 0.5687 | −0.0241 | 0.4533 | 0.026* | |
O2 | 0.57207 (11) | 0.18365 (13) | 0.43316 (4) | 0.0257 (3) | |
H1 | 0.7750 (16) | 0.178 (2) | 0.5181 (7) | 0.017 (4)* | |
H2O | 0.488 (2) | 0.180 (2) | 0.4399 (9) | 0.053 (7)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C9 | 0.0288 (9) | 0.0323 (11) | 0.0223 (8) | −0.0047 (8) | 0.0017 (6) | −0.0020 (7) |
C8 | 0.0400 (10) | 0.0357 (11) | 0.0250 (9) | −0.0033 (9) | −0.0011 (7) | −0.0090 (8) |
C7 | 0.0392 (9) | 0.0353 (11) | 0.0182 (8) | 0.0101 (8) | 0.0001 (7) | −0.0033 (7) |
C6 | 0.0317 (9) | 0.0378 (11) | 0.0215 (8) | 0.0056 (8) | 0.0062 (7) | 0.0044 (7) |
C5 | 0.0276 (8) | 0.0292 (10) | 0.0215 (8) | −0.0013 (7) | 0.0005 (6) | 0.0027 (7) |
C4 | 0.0219 (8) | 0.0235 (9) | 0.0176 (7) | 0.0044 (7) | −0.0014 (6) | −0.0001 (6) |
C3 | 0.0199 (7) | 0.0213 (9) | 0.0198 (7) | 0.0021 (6) | −0.0011 (6) | 0.0002 (6) |
C2 | 0.0185 (7) | 0.0204 (9) | 0.0187 (7) | 0.0023 (6) | −0.0023 (5) | −0.0023 (6) |
C1 | 0.0159 (7) | 0.0193 (9) | 0.0188 (7) | 0.0022 (6) | −0.0001 (5) | −0.0008 (6) |
O1 | 0.0236 (6) | 0.0187 (6) | 0.0236 (6) | −0.0001 (5) | 0.0032 (4) | −0.0025 (5) |
N1 | 0.0225 (6) | 0.0185 (8) | 0.0160 (6) | −0.0029 (6) | 0.0001 (5) | −0.0034 (5) |
C10 | 0.0232 (7) | 0.0226 (9) | 0.0179 (7) | −0.0014 (7) | 0.0013 (6) | −0.0034 (6) |
C12 | 0.0252 (8) | 0.0235 (9) | 0.0216 (7) | −0.0011 (7) | 0.0030 (6) | −0.0015 (6) |
C13 | 0.0203 (8) | 0.0421 (12) | 0.0292 (9) | −0.0020 (8) | 0.0028 (6) | 0.0006 (8) |
C11 | 0.0221 (7) | 0.0250 (10) | 0.0190 (7) | −0.0013 (7) | −0.0007 (6) | −0.0029 (6) |
O2 | 0.0233 (6) | 0.0266 (7) | 0.0273 (6) | 0.0008 (5) | 0.0002 (5) | 0.0026 (5) |
Geometric parameters (Å, º) top
C9—C8 | 1.386 (2) | C1—N1 | 1.335 (2) |
C9—C4 | 1.395 (2) | N1—C10 | 1.4733 (18) |
C9—H9 | 0.95 | N1—H1 | 0.856 (18) |
C8—C7 | 1.389 (3) | C10—C12 | 1.521 (2) |
C8—H8 | 0.95 | C10—C11 | 1.533 (2) |
C7—C6 | 1.382 (3) | C10—H10 | 1 |
C7—H7 | 0.95 | C12—C13 | 1.522 (2) |
C6—C5 | 1.395 (2) | C12—H12A | 0.99 |
C6—H6 | 0.95 | C12—H12B | 0.99 |
C5—C4 | 1.397 (2) | C13—H13A | 0.98 |
C5—H5 | 0.95 | C13—H13B | 0.98 |
C4—C3 | 1.469 (2) | C13—H13C | 0.98 |
C3—C2 | 1.339 (2) | C11—O2 | 1.419 (2) |
C3—H3 | 0.95 | C11—H11A | 0.99 |
C2—C1 | 1.488 (2) | C11—H11B | 0.99 |
C2—H2 | 0.95 | O2—H2O | 0.91 (3) |
C1—O1 | 1.253 (2) | | |
| | | |
C8—C9—C4 | 120.83 (16) | C1—N1—H1 | 119.1 (12) |
C8—C9—H9 | 119.6 | C10—N1—H1 | 118.6 (12) |
C4—C9—H9 | 119.6 | N1—C10—C12 | 109.89 (13) |
C9—C8—C7 | 120.46 (17) | N1—C10—C11 | 110.05 (13) |
C9—C8—H8 | 119.8 | C12—C10—C11 | 111.57 (13) |
C7—C8—H8 | 119.8 | N1—C10—H10 | 108.4 |
C6—C7—C8 | 119.41 (15) | C12—C10—H10 | 108.4 |
C6—C7—H7 | 120.3 | C11—C10—H10 | 108.4 |
C8—C7—H7 | 120.3 | C10—C12—C13 | 113.65 (14) |
C7—C6—C5 | 120.37 (16) | C10—C12—H12A | 108.8 |
C7—C6—H6 | 119.8 | C13—C12—H12A | 108.8 |
C5—C6—H6 | 119.8 | C10—C12—H12B | 108.8 |
C6—C5—C4 | 120.62 (16) | C13—C12—H12B | 108.8 |
C6—C5—H5 | 119.7 | H12A—C12—H12B | 107.7 |
C4—C5—H5 | 119.7 | C12—C13—H13A | 109.5 |
C9—C4—C5 | 118.30 (14) | C12—C13—H13B | 109.5 |
C9—C4—C3 | 123.01 (14) | H13A—C13—H13B | 109.5 |
C5—C4—C3 | 118.68 (15) | C12—C13—H13C | 109.5 |
C2—C3—C4 | 127.11 (16) | H13A—C13—H13C | 109.5 |
C2—C3—H3 | 116.4 | H13B—C13—H13C | 109.5 |
C4—C3—H3 | 116.4 | O2—C11—C10 | 110.08 (13) |
C3—C2—C1 | 120.40 (15) | O2—C11—H11A | 109.6 |
C3—C2—H2 | 119.8 | C10—C11—H11A | 109.6 |
C1—C2—H2 | 119.8 | O2—C11—H11B | 109.6 |
O1—C1—N1 | 122.67 (14) | C10—C11—H11B | 109.6 |
O1—C1—C2 | 121.91 (14) | H11A—C11—H11B | 108.2 |
N1—C1—C2 | 115.42 (14) | C11—O2—H2O | 110.0 (15) |
C1—N1—C10 | 121.93 (14) | | |
| | | |
C4—C9—C8—C7 | −0.3 (3) | C3—C2—C1—O1 | −10.2 (2) |
C9—C8—C7—C6 | −0.1 (3) | C3—C2—C1—N1 | 169.54 (14) |
C8—C7—C6—C5 | 0.8 (3) | O1—C1—N1—C10 | 3.1 (2) |
C7—C6—C5—C4 | −1.0 (3) | C2—C1—N1—C10 | −176.62 (13) |
C8—C9—C4—C5 | 0.0 (3) | C1—N1—C10—C12 | −162.75 (14) |
C8—C9—C4—C3 | −179.23 (16) | C1—N1—C10—C11 | 74.00 (19) |
C6—C5—C4—C9 | 0.6 (2) | N1—C10—C12—C13 | 66.99 (19) |
C6—C5—C4—C3 | 179.90 (15) | C11—C10—C12—C13 | −170.66 (14) |
C9—C4—C3—C2 | −16.1 (3) | N1—C10—C11—O2 | 60.87 (16) |
C5—C4—C3—C2 | 164.65 (16) | C12—C10—C11—O2 | −61.40 (16) |
C4—C3—C2—C1 | −179.32 (14) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2O···O1i | 0.91 (3) | 1.88 (3) | 2.773 (2) | 165 (2) |
N1—H1···O1ii | 0.86 (2) | 2.03 (2) | 2.876 (2) | 173 (2) |
C2—H2···O1ii | 0.95 | 2.70 | 3.415 (2) | 133 |
C7—H7···O2iii | 0.95 | 2.45 | 3.383 (2) | 167 |
Symmetry codes: (i) −x+1, −y, −z+1; (ii) −x+3/2, y+1/2, z; (iii) x, −y+1/2, z+1/2. |
(2
E)-1-(4-hydroxypiperidin-1-yl)-3-phenylprop-2-en-1-one (3)
top
Crystal data top
C14H17NO2 | F(000) = 992 |
Mr = 231.28 | Dx = 1.241 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 7280 reflections |
a = 14.2940 (7) Å | θ = 1.0–27.5° |
b = 11.4480 (6) Å | µ = 0.08 mm−1 |
c = 16.1120 (9) Å | T = 100 K |
β = 110.158 (3)° | Block, colourless |
V = 2475.0 (2) Å3 | 0.46 × 0.25 × 0.15 mm |
Z = 8 | |
Data collection top
Nonius KappaCCD diffractometer | 3877 reflections with I > 2σ(I) |
CCD scans | Rint = 0.047 |
Absorption correction: multi-scan (DENZO-SMN; Otwinowski & Minor, 1997) | θmax = 27.5°, θmin = 3.0° |
Tmin = 0.963, Tmax = 0.988 | h = −18→18 |
15206 measured reflections | k = −14→14 |
5525 independent reflections | l = −19→20 |
Refinement top
Refinement on F2 | Hydrogen site location: mixed |
Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
R[F2 > 2σ(F2)] = 0.051 | w = 1/[σ2(Fo2) + (0.0544P)2 + 0.9018P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.128 | (Δ/σ)max < 0.001 |
S = 1.04 | Δρmax = 0.25 e Å−3 |
5525 reflections | Δρmin = −0.22 e Å−3 |
316 parameters | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
0 restraints | Extinction coefficient: 0.0061 (10) |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O2A | 0.78159 (10) | 0.47906 (11) | 0.64789 (9) | 0.0346 (3) | |
C12A | 0.77634 (12) | 0.35948 (15) | 0.66984 (11) | 0.0267 (4) | |
H12A | 0.7674 | 0.3573 | 0.7287 | 0.032* | |
C11 | 0.87211 (12) | 0.29399 (15) | 0.67953 (11) | 0.0281 (4) | |
H11A | 0.8857 | 0.2982 | 0.6234 | 0.034* | |
H11C | 0.9285 | 0.331 | 0.7263 | 0.034* | |
C10A | 0.86327 (12) | 0.16753 (16) | 0.70311 (11) | 0.0295 (4) | |
H10A | 0.9248 | 0.125 | 0.7065 | 0.035* | |
H10C | 0.8555 | 0.1631 | 0.7617 | 0.035* | |
N1A | 0.77721 (10) | 0.11278 (12) | 0.63643 (9) | 0.0263 (3) | |
C14A | 0.68213 (12) | 0.17000 (15) | 0.62661 (12) | 0.0284 (4) | |
H14A | 0.668 | 0.1628 | 0.6824 | 0.034* | |
H14C | 0.6276 | 0.1311 | 0.5791 | 0.034* | |
C13 | 0.68658 (12) | 0.29807 (15) | 0.60410 (11) | 0.0269 (4) | |
H13A | 0.6248 | 0.3374 | 0.6039 | 0.032* | |
H13C | 0.6901 | 0.3048 | 0.544 | 0.032* | |
C1A | 0.77952 (12) | 0.01756 (15) | 0.58768 (11) | 0.0261 (4) | |
O1A | 0.70253 (9) | −0.02909 (11) | 0.53809 (9) | 0.0363 (3) | |
C2A | 0.87930 (12) | −0.02847 (15) | 0.59372 (11) | 0.0256 (4) | |
H2A | 0.9352 | 0.0225 | 0.6099 | 0.031* | |
C3A | 0.89076 (12) | −0.13971 (15) | 0.57677 (11) | 0.0255 (4) | |
H3A | 0.8343 | −0.189 | 0.5658 | 0.031* | |
C4A | 0.98257 (12) | −0.19449 (15) | 0.57329 (11) | 0.0242 (4) | |
C9A | 1.06720 (12) | −0.12831 (16) | 0.57927 (11) | 0.0271 (4) | |
H9A | 1.0667 | −0.0461 | 0.5873 | 0.032* | |
C8A | 1.15151 (12) | −0.18219 (16) | 0.57359 (11) | 0.0286 (4) | |
H8A | 1.2086 | −0.1367 | 0.5779 | 0.034* | |
C7A | 1.15337 (12) | −0.30183 (16) | 0.56174 (11) | 0.0289 (4) | |
H7A | 1.2114 | −0.3384 | 0.5578 | 0.035* | |
C6A | 1.07010 (12) | −0.36791 (16) | 0.55560 (11) | 0.0299 (4) | |
H6A | 1.071 | −0.45 | 0.5474 | 0.036* | |
C5A | 0.98508 (12) | −0.31437 (16) | 0.56139 (11) | 0.0279 (4) | |
H5A | 0.9283 | −0.3603 | 0.5572 | 0.033* | |
O2B | 0.89628 (9) | −0.13973 (13) | 0.26615 (9) | 0.0370 (3) | |
C12B | 0.81214 (12) | −0.20269 (15) | 0.27152 (12) | 0.0276 (4) | |
H12B | 0.7633 | −0.2146 | 0.2105 | 0.033* | |
C11B | 0.76169 (13) | −0.13560 (15) | 0.32601 (12) | 0.0291 (4) | |
H11D | 0.7356 | −0.0608 | 0.2962 | 0.035* | |
H11B | 0.8113 | −0.1175 | 0.3848 | 0.035* | |
C10B | 0.67627 (13) | −0.20561 (15) | 0.33779 (12) | 0.0293 (4) | |
H10D | 0.6483 | −0.1626 | 0.3772 | 0.035* | |
H10B | 0.6227 | −0.2158 | 0.2798 | 0.035* | |
N1B | 0.71215 (10) | −0.32033 (12) | 0.37605 (9) | 0.0249 (3) | |
C14B | 0.75993 (12) | −0.38805 (15) | 0.32405 (12) | 0.0268 (4) | |
H14D | 0.7104 | −0.4054 | 0.2651 | 0.032* | |
H14B | 0.7843 | −0.4632 | 0.3541 | 0.032* | |
C13B | 0.84699 (12) | −0.32056 (16) | 0.31314 (12) | 0.0276 (4) | |
H13D | 0.8995 | −0.3097 | 0.3716 | 0.033* | |
H13B | 0.8758 | −0.3656 | 0.2753 | 0.033* | |
C1B | 0.69647 (11) | −0.36930 (15) | 0.44622 (11) | 0.0229 (4) | |
O1B | 0.72572 (9) | −0.46994 (10) | 0.47088 (8) | 0.0293 (3) | |
C2B | 0.64182 (11) | −0.30024 (15) | 0.49318 (11) | 0.0246 (4) | |
H2B | 0.6424 | −0.2173 | 0.4912 | 0.03* | |
C3B | 0.59195 (11) | −0.35520 (16) | 0.53811 (11) | 0.0260 (4) | |
H3B | 0.5935 | −0.4382 | 0.5377 | 0.031* | |
C4B | 0.53510 (11) | −0.30052 (17) | 0.58809 (11) | 0.0279 (4) | |
C9B | 0.53074 (12) | −0.18025 (18) | 0.59829 (12) | 0.0330 (4) | |
H9B | 0.5666 | −0.13 | 0.5731 | 0.04* | |
C8B | 0.47418 (14) | −0.1332 (2) | 0.64507 (13) | 0.0421 (5) | |
H8B | 0.4711 | −0.051 | 0.6516 | 0.051* | |
C7B | 0.42193 (13) | −0.2074 (2) | 0.68244 (13) | 0.0449 (6) | |
H7B | 0.3836 | −0.1754 | 0.7148 | 0.054* | |
C6B | 0.42566 (13) | −0.3257 (2) | 0.67275 (12) | 0.0412 (5) | |
H6B | 0.3897 | −0.3757 | 0.6981 | 0.049* | |
C5B | 0.48174 (12) | −0.37260 (19) | 0.62607 (12) | 0.0345 (4) | |
H5B | 0.4841 | −0.4549 | 0.6197 | 0.041* | |
H2AO | 0.7662 (16) | 0.4878 (18) | 0.5916 (16) | 0.046 (6)* | |
H2BO | 0.8734 (18) | −0.081 (2) | 0.2299 (17) | 0.063 (8)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O2A | 0.0422 (7) | 0.0287 (7) | 0.0278 (7) | −0.0008 (6) | 0.0054 (6) | −0.0020 (6) |
C12A | 0.0277 (9) | 0.0300 (10) | 0.0225 (9) | 0.0023 (7) | 0.0088 (7) | 0.0002 (7) |
C11 | 0.0222 (8) | 0.0378 (10) | 0.0229 (9) | −0.0003 (7) | 0.0059 (7) | −0.0049 (7) |
C10A | 0.0228 (8) | 0.0374 (10) | 0.0259 (9) | 0.0056 (8) | 0.0054 (7) | −0.0027 (8) |
N1A | 0.0203 (7) | 0.0302 (8) | 0.0288 (8) | 0.0030 (6) | 0.0091 (6) | −0.0001 (6) |
C14A | 0.0218 (8) | 0.0332 (10) | 0.0340 (10) | 0.0044 (7) | 0.0145 (7) | 0.0014 (8) |
C13 | 0.0220 (8) | 0.0312 (10) | 0.0277 (9) | 0.0049 (7) | 0.0088 (7) | −0.0002 (7) |
C1A | 0.0242 (8) | 0.0247 (9) | 0.0316 (9) | 0.0011 (7) | 0.0125 (7) | 0.0037 (7) |
O1A | 0.0243 (6) | 0.0315 (7) | 0.0515 (9) | −0.0008 (5) | 0.0112 (6) | −0.0070 (6) |
C2A | 0.0221 (8) | 0.0283 (9) | 0.0273 (9) | −0.0006 (7) | 0.0099 (7) | 0.0008 (7) |
C3A | 0.0205 (8) | 0.0285 (10) | 0.0271 (9) | −0.0020 (7) | 0.0076 (7) | −0.0009 (7) |
C4A | 0.0213 (8) | 0.0297 (10) | 0.0197 (8) | 0.0025 (7) | 0.0048 (7) | −0.0008 (7) |
C9A | 0.0263 (8) | 0.0280 (9) | 0.0275 (9) | 0.0030 (7) | 0.0101 (7) | 0.0016 (7) |
C8A | 0.0245 (8) | 0.0370 (11) | 0.0261 (9) | 0.0014 (7) | 0.0110 (7) | 0.0040 (7) |
C7A | 0.0241 (8) | 0.0400 (11) | 0.0221 (9) | 0.0088 (8) | 0.0075 (7) | −0.0021 (7) |
C6A | 0.0272 (9) | 0.0310 (10) | 0.0263 (9) | 0.0050 (7) | 0.0028 (7) | −0.0068 (7) |
C5A | 0.0207 (8) | 0.0316 (10) | 0.0269 (9) | −0.0007 (7) | 0.0024 (7) | −0.0041 (7) |
O2B | 0.0229 (6) | 0.0445 (9) | 0.0442 (8) | −0.0004 (6) | 0.0125 (6) | 0.0159 (7) |
C12B | 0.0206 (8) | 0.0341 (10) | 0.0286 (9) | −0.0009 (7) | 0.0094 (7) | 0.0056 (7) |
C11B | 0.0287 (9) | 0.0293 (10) | 0.0294 (9) | 0.0024 (7) | 0.0103 (7) | 0.0062 (7) |
C10B | 0.0264 (9) | 0.0324 (10) | 0.0326 (10) | 0.0068 (7) | 0.0147 (8) | 0.0073 (8) |
N1B | 0.0224 (7) | 0.0271 (8) | 0.0272 (8) | 0.0028 (6) | 0.0113 (6) | 0.0027 (6) |
C14B | 0.0274 (9) | 0.0283 (9) | 0.0269 (9) | 0.0018 (7) | 0.0121 (7) | 0.0012 (7) |
C13B | 0.0238 (8) | 0.0336 (10) | 0.0282 (9) | 0.0040 (7) | 0.0125 (7) | 0.0036 (7) |
C1B | 0.0191 (7) | 0.0257 (9) | 0.0236 (8) | −0.0048 (7) | 0.0068 (7) | −0.0018 (7) |
O1B | 0.0360 (7) | 0.0233 (7) | 0.0324 (7) | 0.0007 (5) | 0.0169 (6) | 0.0010 (5) |
C2B | 0.0205 (8) | 0.0261 (9) | 0.0263 (9) | −0.0016 (7) | 0.0067 (7) | −0.0008 (7) |
C3B | 0.0195 (8) | 0.0331 (10) | 0.0242 (9) | −0.0027 (7) | 0.0059 (7) | −0.0018 (7) |
C4B | 0.0157 (8) | 0.0451 (11) | 0.0212 (9) | −0.0022 (7) | 0.0043 (7) | −0.0009 (7) |
C9B | 0.0236 (9) | 0.0461 (12) | 0.0299 (10) | 0.0067 (8) | 0.0102 (8) | 0.0029 (8) |
C8B | 0.0344 (10) | 0.0530 (13) | 0.0396 (12) | 0.0161 (9) | 0.0137 (9) | 0.0018 (9) |
C7B | 0.0220 (9) | 0.0803 (17) | 0.0355 (11) | 0.0086 (10) | 0.0139 (8) | −0.0028 (11) |
C6B | 0.0230 (9) | 0.0723 (16) | 0.0301 (10) | −0.0124 (10) | 0.0114 (8) | −0.0064 (10) |
C5B | 0.0218 (8) | 0.0544 (13) | 0.0264 (9) | −0.0093 (8) | 0.0072 (7) | −0.0061 (8) |
Geometric parameters (Å, º) top
O2A—C12A | 1.422 (2) | O2B—C12B | 1.430 (2) |
O2A—H2AO | 0.86 (2) | O2B—H2BO | 0.88 (3) |
C12A—C11 | 1.521 (2) | C12B—C13B | 1.513 (2) |
C12A—C13 | 1.525 (2) | C12B—C11B | 1.522 (2) |
C12A—H12A | 1 | C12B—H12B | 1 |
C11—C10A | 1.513 (3) | C11B—C10B | 1.526 (2) |
C11—H11A | 0.99 | C11B—H11D | 0.99 |
C11—H11C | 0.99 | C11B—H11B | 0.99 |
C10A—N1A | 1.466 (2) | C10B—N1B | 1.466 (2) |
C10A—H10A | 0.99 | C10B—H10D | 0.99 |
C10A—H10C | 0.99 | C10B—H10B | 0.99 |
N1A—C1A | 1.351 (2) | N1B—C1B | 1.348 (2) |
N1A—C14A | 1.467 (2) | N1B—C14B | 1.471 (2) |
C14A—C13 | 1.517 (2) | C14B—C13B | 1.526 (2) |
C14A—H14A | 0.99 | C14B—H14D | 0.99 |
C14A—H14C | 0.99 | C14B—H14B | 0.99 |
C13—H13A | 0.99 | C13B—H13D | 0.99 |
C13—H13C | 0.99 | C13B—H13B | 0.99 |
C1A—O1A | 1.236 (2) | C1B—O1B | 1.243 (2) |
C1A—C2A | 1.492 (2) | C1B—C2B | 1.488 (2) |
C2A—C3A | 1.324 (2) | C2B—C3B | 1.336 (2) |
C2A—H2A | 0.95 | C2B—H2B | 0.95 |
C3A—C4A | 1.473 (2) | C3B—C4B | 1.467 (2) |
C3A—H3A | 0.95 | C3B—H3B | 0.95 |
C4A—C5A | 1.388 (2) | C4B—C9B | 1.390 (3) |
C4A—C9A | 1.402 (2) | C4B—C5B | 1.400 (2) |
C9A—C8A | 1.385 (2) | C9B—C8B | 1.390 (3) |
C9A—H9A | 0.95 | C9B—H9B | 0.95 |
C8A—C7A | 1.384 (3) | C8B—C7B | 1.397 (3) |
C8A—H8A | 0.95 | C8B—H8B | 0.95 |
C7A—C6A | 1.385 (2) | C7B—C6B | 1.366 (3) |
C7A—H7A | 0.95 | C7B—H7B | 0.95 |
C6A—C5A | 1.392 (2) | C6B—C5B | 1.383 (3) |
C6A—H6A | 0.95 | C6B—H6B | 0.95 |
C5A—H5A | 0.95 | C5B—H5B | 0.95 |
| | | |
C12A—O2A—H2AO | 110.9 (14) | C12B—O2B—H2BO | 107.4 (16) |
O2A—C12A—C11 | 112.16 (14) | O2B—C12B—C13B | 108.72 (13) |
O2A—C12A—C13 | 112.01 (14) | O2B—C12B—C11B | 110.86 (14) |
C11—C12A—C13 | 110.86 (14) | C13B—C12B—C11B | 110.09 (14) |
O2A—C12A—H12A | 107.2 | O2B—C12B—H12B | 109 |
C11—C12A—H12A | 107.2 | C13B—C12B—H12B | 109 |
C13—C12A—H12A | 107.2 | C11B—C12B—H12B | 109 |
C10A—C11—C12A | 110.33 (14) | C12B—C11B—C10B | 111.42 (15) |
C10A—C11—H11A | 109.6 | C12B—C11B—H11D | 109.3 |
C12A—C11—H11A | 109.6 | C10B—C11B—H11D | 109.3 |
C10A—C11—H11C | 109.6 | C12B—C11B—H11B | 109.3 |
C12A—C11—H11C | 109.6 | C10B—C11B—H11B | 109.3 |
H11A—C11—H11C | 108.1 | H11D—C11B—H11B | 108 |
N1A—C10A—C11 | 110.29 (14) | N1B—C10B—C11B | 110.11 (13) |
N1A—C10A—H10A | 109.6 | N1B—C10B—H10D | 109.6 |
C11—C10A—H10A | 109.6 | C11B—C10B—H10D | 109.6 |
N1A—C10A—H10C | 109.6 | N1B—C10B—H10B | 109.6 |
C11—C10A—H10C | 109.6 | C11B—C10B—H10B | 109.6 |
H10A—C10A—H10C | 108.1 | H10D—C10B—H10B | 108.2 |
C1A—N1A—C10A | 126.07 (14) | C1B—N1B—C10B | 126.15 (14) |
C1A—N1A—C14A | 120.33 (14) | C1B—N1B—C14B | 120.17 (14) |
C10A—N1A—C14A | 113.59 (14) | C10B—N1B—C14B | 113.35 (13) |
N1A—C14A—C13 | 110.10 (13) | N1B—C14B—C13B | 110.85 (14) |
N1A—C14A—H14A | 109.6 | N1B—C14B—H14D | 109.5 |
C13—C14A—H14A | 109.6 | C13B—C14B—H14D | 109.5 |
N1A—C14A—H14C | 109.6 | N1B—C14B—H14B | 109.5 |
C13—C14A—H14C | 109.6 | C13B—C14B—H14B | 109.5 |
H14A—C14A—H14C | 108.2 | H14D—C14B—H14B | 108.1 |
C14A—C13—C12A | 111.96 (14) | C12B—C13B—C14B | 110.23 (13) |
C14A—C13—H13A | 109.2 | C12B—C13B—H13D | 109.6 |
C12A—C13—H13A | 109.2 | C14B—C13B—H13D | 109.6 |
C14A—C13—H13C | 109.2 | C12B—C13B—H13B | 109.6 |
C12A—C13—H13C | 109.2 | C14B—C13B—H13B | 109.6 |
H13A—C13—H13C | 107.9 | H13D—C13B—H13B | 108.1 |
O1A—C1A—N1A | 121.98 (15) | O1B—C1B—N1B | 121.24 (15) |
O1A—C1A—C2A | 120.51 (16) | O1B—C1B—C2B | 120.50 (15) |
N1A—C1A—C2A | 117.49 (15) | N1B—C1B—C2B | 118.26 (15) |
C3A—C2A—C1A | 120.63 (15) | C3B—C2B—C1B | 119.80 (16) |
C3A—C2A—H2A | 119.7 | C3B—C2B—H2B | 120.1 |
C1A—C2A—H2A | 119.7 | C1B—C2B—H2B | 120.1 |
C2A—C3A—C4A | 126.32 (15) | C2B—C3B—C4B | 126.63 (17) |
C2A—C3A—H3A | 116.8 | C2B—C3B—H3B | 116.7 |
C4A—C3A—H3A | 116.8 | C4B—C3B—H3B | 116.7 |
C5A—C4A—C9A | 118.75 (15) | C9B—C4B—C5B | 118.61 (16) |
C5A—C4A—C3A | 119.48 (15) | C9B—C4B—C3B | 122.90 (15) |
C9A—C4A—C3A | 121.75 (16) | C5B—C4B—C3B | 118.48 (17) |
C8A—C9A—C4A | 120.31 (17) | C8B—C9B—C4B | 120.39 (18) |
C8A—C9A—H9A | 119.8 | C8B—C9B—H9B | 119.8 |
C4A—C9A—H9A | 119.8 | C4B—C9B—H9B | 119.8 |
C7A—C8A—C9A | 120.56 (16) | C9B—C8B—C7B | 119.7 (2) |
C7A—C8A—H8A | 119.7 | C9B—C8B—H8B | 120.1 |
C9A—C8A—H8A | 119.7 | C7B—C8B—H8B | 120.1 |
C8A—C7A—C6A | 119.56 (15) | C6B—C7B—C8B | 120.36 (18) |
C8A—C7A—H7A | 120.2 | C6B—C7B—H7B | 119.8 |
C6A—C7A—H7A | 120.2 | C8B—C7B—H7B | 119.8 |
C7A—C6A—C5A | 120.21 (17) | C7B—C6B—C5B | 120.00 (19) |
C7A—C6A—H6A | 119.9 | C7B—C6B—H6B | 120 |
C5A—C6A—H6A | 119.9 | C5B—C6B—H6B | 120 |
C4A—C5A—C6A | 120.61 (16) | C6B—C5B—C4B | 120.9 (2) |
C4A—C5A—H5A | 119.7 | C6B—C5B—H5B | 119.5 |
C6A—C5A—H5A | 119.7 | C4B—C5B—H5B | 119.5 |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O2A—H2AO···O1Bi | 0.86 (2) | 1.89 (2) | 2.746 (2) | 171 (2) |
O2B—H2BO···O2Aii | 0.88 (3) | 1.90 (3) | 2.748 (2) | 160 (2) |
C10A—H10A···O2Biii | 0.99 | 2.45 | 3.314 (2) | 146 |
C2B—H2B···O1A | 0.95 | 2.35 | 3.237 (2) | 156 |
Symmetry codes: (i) x, y+1, z; (ii) x, −y+1/2, z−1/2; (iii) −x+2, −y, −z+1. |
Selected anticonvulsant activity results and neurotoxicity data for analyzed
cinnamamide derivatives topCompound | MES (100 mg, 0.5 h) | scPTZ (300 mg, 0.5 h) | Neurotoxicity (100 mg, 0.5 h) | Neurotoxicity (300 mg, 0.5 h) |
(1) (R,S) | 2/3 | 1/1 | 1/8 | 4/4 |
(2) (R,S) | 1/3 | 1/1 | 3/8 | 4/4 |
(3) | 3/3 | 1/1 | — | 4/4 |
(4) (R,S) | 3/3 | 1/1 | — | 4/4 |
(5) (S) | 3/3 | — | 2/8 | 4/4 |
(6) (R) | 3/3 | 1/1 | 1/8 | 4/4 |
(7) (R,S) | 3/3 | 1/1 | — | 4/4 |
(8) | — | — | — | 4/4 |
The results are presented as the number of animals responding to treatment or
displaying neurotoxicity over the number of animals used in the test. The dash
(–) indicates a lack of activity/neurotoxicity at the tested dose. |
Comparison of the reported pharmacophore model of anti-MES active agents
(Khan et al., 2012) with distances (Å) in the crystal
structures of
cinnamamide derivatives topCompound | Ph–HBD | Ph–D1 | Ph–D2 | HBD–D1 | HBD–D2 | Reference |
Model | 4.9–8.02 | 3.02–5.68 | 3.02–5.68 | 2.89–6.00 | 2.89–6.00 | Khan et al. (2012) |
(1) | 5.682 | 8.705 | 3.328 | 3.351 | 2.410 | This work |
(2) | 5.718 | 8.054 | 3.332 | 3.228 | 2.418 | This work |
(3), molecule A | 5.711 | 9.563 | 3.315 | 4.772 | 2.426 | This work |
(3), molecule B | 5.714 | 9.865 | 3.319 | 4.787 | 2.426 | This work |
(4) | 5.729 | 7.990 | 3.339 | 3.112 | 2.412 | Gunia-Krzyżak et al. (2016a) |
(5) | 5.700 | 8.367 | 3.322 | 3.378 | 2.413 | Gunia-Krzyżak et al. (2016b) |
(6) | 5.708 | 8.376 | 3.330 | 3.375 | 2.414 | Gunia-Krzyżak et al. (2016b) |
(7) | 5.708 | 6.673 | 3.310 | 3.309 | 2.443 | Gunia-Krzyżak et al. (2017b) |
(7), 2nd position OH | 5.708 | 8.372 | 3.310 | 3.399 | 2.443 | Gunia-Krzyżak et al. (2017b) |
(8) | 5.716 | 8.523 | 3.336 | 3.331 | 2.410 | Gunia-Krzyżak et al. (2016a) |
Abbreviations: D1 is the O atom in the substituent at the N atom,
HBD is the centroid of the amide bond,
Ph is the centroid of the phenyl ring and
D2 is the centroid of the double bond. |