Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536810028710/zl2290sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536810028710/zl2290Isup2.hkl |
CCDC reference: 759018
Key indicators
- Single-crystal X-ray study
- T = 294 K
- Mean (N-C) = 0.003 Å
- R factor = 0.018
- wR factor = 0.043
- Data-to-parameter ratio = 16.6
checkCIF/PLATON results
No syntax errors found
Alert level B PLAT232_ALERT_2_B Hirshfeld Test Diff (M-X) Cd1 -- S1 .. 50.94 su
Alert level C PLAT232_ALERT_2_C Hirshfeld Test Diff (M-X) Cd1 -- C1 .. 7.98 su PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.17 PLAT352_ALERT_3_C Short N-H Bond (0.87A) N3 - H5 ... 0.73 Ang.
Alert level G PLAT128_ALERT_4_G Alternate Setting of Space-group P2/c ....... P2/n
0 ALERT level A = In general: serious problem 1 ALERT level B = Potentially serious problem 3 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 3 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 1 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
To 0.17 g (1.0 mmol) cadmium(II) cyanide (prepared by the reaction of CdCl2.H2O and KCN in 1:2 molar ratio in water) suspended in 15 mL water was added 2 equivalents of thiourea in methanol. Yellow precipitates formed, were filtered and the filtrate was kept for crystallization. Crystals were grown by slow evaporation of a water/methanol solution at room temperature.
All non-H atoms were refined anisotropically. Hydrogen atoms were located in a difference Fourier map and freely refined isotropically.
The interest in cadmium(II) complexes of thiourea (Tu) arises because some of them exhibit non-linear optical properties (Rajesh et al., 2004) and they are useful for the convenient preparation of cadmium sulfide based semiconducting materials by their thermal decomposition in air (Stoev et al., 1994). Several crystallographic reports about cadmium(II) complexes of thiourea reveal that it coordinates to cadmium(II) via the sulfur atom (Corao et al., 1969; Marcos et al., 1998; Wang et al., 2002). Recently, we have reported the crystal structures of cadmium(II) complexes of N,N'-dimethylthiourea (Dmtu), [Cd(Dmtu)2Cl2] (Malik et al., 2010) and tetramethylthiourea (Tmtu), [Cd(Tmtu)2Br2] (Nawaz et al., 2010a) and [Cd(Tmtu)2I2] (Nawaz et al., 2010b). Herein, we report the crystal structure of a cadmium cyanide complex of thiourea, biscyanidobis(thiourea-kS)cadmium(II) monohydrate, [Cd(Tu)2(CN)2].H2O. The present investigation was carried out in view of our continuous interest in the structural chemistry of cyanido complexes of d10 metal ions with thiourea type ligands (Ahmad et al., 2009; Hanif et al., 2007).
In the title compound, the Cd atom is situated on a twofold axis of symmetry and is bonded to two cyanide carbon atoms and two sulfur atoms of thiourea (Figure 1). The four coordinate metal ion adopts a severely distorted tetrahedral geometry, the bond angles being in the range of 95.76 (4) - 143.5 (1) °. The Cd—S and Cd—C bond lengths are 2.6363 (5) Å and 2.211 (2) Å respectively. These are in agreement with those reported for related compounds (Marcos et al., 1998; Malik et al. 2010; Nawaz et al., 2010a,b; Wang et al., 2002; Yoshikawa et al., 2003). The two C—N bond lengths in thiourea, C2—N2 and C2—N3, are 1.312 (2) Å and 1.305 (2) Å respectively. The CNH2 fragments of the two thiourea molecules are essentially planar, the maximum deviation from the mean plane being for the nitrogen atoms with 0.03 (1) Å. These values are consistent with a significant CN double bond character and electron delocalization in the SCN2 moiety. To the best of our knowledge, this is the first X-ray structure of a cadmium complex having both sulfur containing ligands and cyanide in its coordination sphere.
The molecules pack to form columns parallel to the b direction (Figure 2). Within these columns, each metal ion interacts with two sulfur atoms of a neighboring molecule (Cd···S: 3.3140 (5) Å), hence extending the tetra-coordinate inner-sphere to a hexa-coordinate outer-sphere with a distorted octahedral environment. These interactions confer to the molecular columns a polymeric chain character.
Intermolecular hydrogen bonding takes place through N—H···S as well as N—H···N(CN) interactions (Table 1). The complex molecules also interact with the water molecules through C—N···H—O and N—H···O bonds. In this scheme the water molecule is tetrahedrally hydrogen bonded to four complex molecules. This generates a three-dimensional hydrogen bonding network where the molecular chains are interconnected through hydrogen bonding either directly or through the water molecules.
For background to cadmium(II) complexes of thiourea-type ligands, see: Corao et al. (1969); Malik et al. (2010); Marcos et al. (1998); Nawaz et al. (2010a,b); Wang et al. (2002). For the non-linear optical properties and semi-conducting applications of Cd–thiourea complexes, see: Rajesh et al. (2004); Stoev et al. (1994). For the structures of cyanido complexes, see: Ahmad et al. (2009); Hanif et al. (2007); Yoshikawa et al. (2003).
Data collection: SMART (Bruker, 2008); cell refinement: SAINT (Bruker, 2008); data reduction: SAINT (Bruker, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
[Cd(CN)2(CH4N2S)2]·H2O | F(000) = 328 |
Mr = 334.70 | Dx = 1.940 Mg m−3 |
Monoclinic, P2/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yac | Cell parameters from 7211 reflections |
a = 10.5955 (6) Å | θ = 2.3–28.3° |
b = 4.0782 (3) Å | µ = 2.25 mm−1 |
c = 13.4127 (8) Å | T = 294 K |
β = 98.738 (1)° | Parallelepiped, yellow |
V = 572.84 (6) Å3 | 0.29 × 0.28 × 0.24 mm |
Z = 2 |
Bruker SMART APEX area-detector diffractometer | 1430 independent reflections |
Radiation source: normal-focus sealed tube | 1376 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.017 |
ω scans | θmax = 28.3°, θmin = 2.3° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −14→14 |
Tmin = 0.561, Tmax = 0.614 | k = −5→5 |
7211 measured reflections | l = −17→17 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.018 | All H-atom parameters refined |
wR(F2) = 0.043 | w = 1/[σ2(Fo2) + (0.0181P)2 + 0.3434P] where P = (Fo2 + 2Fc2)/3 |
S = 1.10 | (Δ/σ)max < 0.001 |
1430 reflections | Δρmax = 0.73 e Å−3 |
86 parameters | Δρmin = −0.74 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.072 (2) |
[Cd(CN)2(CH4N2S)2]·H2O | V = 572.84 (6) Å3 |
Mr = 334.70 | Z = 2 |
Monoclinic, P2/n | Mo Kα radiation |
a = 10.5955 (6) Å | µ = 2.25 mm−1 |
b = 4.0782 (3) Å | T = 294 K |
c = 13.4127 (8) Å | 0.29 × 0.28 × 0.24 mm |
β = 98.738 (1)° |
Bruker SMART APEX area-detector diffractometer | 1430 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1376 reflections with I > 2σ(I) |
Tmin = 0.561, Tmax = 0.614 | Rint = 0.017 |
7211 measured reflections |
R[F2 > 2σ(F2)] = 0.018 | 0 restraints |
wR(F2) = 0.043 | All H-atom parameters refined |
S = 1.10 | Δρmax = 0.73 e Å−3 |
1430 reflections | Δρmin = −0.74 e Å−3 |
86 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cd1 | 0.2500 | −0.06581 (5) | 0.2500 | 0.03756 (9) | |
S1 | 0.35766 (4) | 0.31297 (11) | 0.39821 (3) | 0.03220 (11) | |
C1 | 0.06927 (16) | −0.2357 (5) | 0.29604 (12) | 0.0340 (3) | |
C2 | 0.28176 (16) | 0.2070 (4) | 0.49904 (12) | 0.0322 (3) | |
N1 | −0.02293 (17) | −0.3264 (6) | 0.31974 (14) | 0.0499 (4) | |
N2 | 0.16014 (18) | 0.2695 (6) | 0.49815 (14) | 0.0535 (5) | |
N3 | 0.3466 (2) | 0.0687 (6) | 0.57851 (14) | 0.0518 (5) | |
O1 | 0.7500 | 0.2524 (6) | 0.2500 | 0.0451 (5) | |
H1 | 0.811 (3) | 0.376 (7) | 0.267 (2) | 0.059 (8)* | |
H2 | 0.121 (3) | 0.355 (8) | 0.451 (2) | 0.068 (9)* | |
H3 | 0.127 (3) | 0.243 (7) | 0.551 (2) | 0.056 (7)* | |
H4 | 0.429 (4) | 0.021 (8) | 0.578 (3) | 0.078 (10)* | |
H5 | 0.313 (3) | 0.013 (7) | 0.619 (3) | 0.064 (9)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cd1 | 0.02792 (11) | 0.05064 (14) | 0.03652 (12) | 0.000 | 0.01265 (7) | 0.000 |
S1 | 0.0315 (2) | 0.0395 (2) | 0.02651 (18) | −0.00063 (16) | 0.00713 (14) | 0.00102 (16) |
C1 | 0.0321 (8) | 0.0416 (9) | 0.0291 (7) | 0.0028 (7) | 0.0072 (6) | 0.0029 (7) |
C2 | 0.0352 (8) | 0.0371 (8) | 0.0249 (7) | −0.0004 (7) | 0.0063 (6) | −0.0031 (6) |
N1 | 0.0367 (8) | 0.0677 (12) | 0.0477 (9) | −0.0040 (8) | 0.0145 (7) | 0.0077 (9) |
N2 | 0.0403 (9) | 0.0892 (16) | 0.0338 (8) | 0.0155 (10) | 0.0148 (7) | 0.0124 (9) |
N3 | 0.0417 (9) | 0.0832 (15) | 0.0319 (8) | 0.0100 (9) | 0.0099 (7) | 0.0164 (9) |
O1 | 0.0373 (10) | 0.0563 (13) | 0.0423 (10) | 0.000 | 0.0076 (8) | 0.000 |
Cd1—C1i | 2.2108 (17) | C2—N2 | 1.312 (2) |
Cd1—C1 | 2.2108 (17) | N2—H2 | 0.78 (3) |
Cd1—S1 | 2.6363 (5) | N2—H3 | 0.84 (3) |
Cd1—S1i | 2.6363 (5) | N3—H4 | 0.90 (4) |
S1—C2 | 1.7300 (17) | N3—H5 | 0.72 (4) |
C1—N1 | 1.134 (2) | O1—H1 | 0.83 (3) |
C2—N3 | 1.305 (2) | ||
C1i—Cd1—C1 | 143.47 (10) | N3—C2—S1 | 119.80 (15) |
C1i—Cd1—S1 | 95.76 (4) | N2—C2—S1 | 121.13 (14) |
C1—Cd1—S1 | 105.48 (5) | C2—N2—H2 | 120 (2) |
C1i—Cd1—S1i | 105.48 (5) | C2—N2—H3 | 120.4 (19) |
C1—Cd1—S1i | 95.76 (4) | H2—N2—H3 | 119 (3) |
S1—Cd1—S1i | 108.26 (2) | C2—N3—H4 | 119 (2) |
C2—S1—Cd1 | 104.11 (6) | C2—N3—H5 | 119 (3) |
N1—C1—Cd1 | 179.22 (18) | H4—N3—H5 | 122 (3) |
N3—C2—N2 | 119.05 (18) |
Symmetry code: (i) −x+1/2, y, −z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H5···O1ii | 0.72 (4) | 2.26 (4) | 2.961 (2) | 166 (3) |
N3—H4···S1ii | 0.90 (4) | 2.61 (4) | 3.470 (2) | 159 (3) |
N2—H3···N1iii | 0.84 (3) | 2.22 (3) | 3.035 (2) | 163 (3) |
N2—H2···N1iv | 0.78 (3) | 2.51 (3) | 3.286 (3) | 171 (3) |
O1—H1···N1v | 0.83 (3) | 2.16 (3) | 2.988 (2) | 176 (3) |
Symmetry codes: (ii) −x+1, −y, −z+1; (iii) −x, −y, −z+1; (iv) x, y+1, z; (v) x+1, y+1, z. |
Experimental details
Crystal data | |
Chemical formula | [Cd(CN)2(CH4N2S)2]·H2O |
Mr | 334.70 |
Crystal system, space group | Monoclinic, P2/n |
Temperature (K) | 294 |
a, b, c (Å) | 10.5955 (6), 4.0782 (3), 13.4127 (8) |
β (°) | 98.738 (1) |
V (Å3) | 572.84 (6) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 2.25 |
Crystal size (mm) | 0.29 × 0.28 × 0.24 |
Data collection | |
Diffractometer | Bruker SMART APEX area-detector |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.561, 0.614 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7211, 1430, 1376 |
Rint | 0.017 |
(sin θ/λ)max (Å−1) | 0.667 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.018, 0.043, 1.10 |
No. of reflections | 1430 |
No. of parameters | 86 |
H-atom treatment | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 0.73, −0.74 |
Computer programs: SMART (Bruker, 2008), SAINT (Bruker, 2008), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H5···O1i | 0.72 (4) | 2.26 (4) | 2.961 (2) | 166 (3) |
N3—H4···S1i | 0.90 (4) | 2.61 (4) | 3.470 (2) | 159 (3) |
N2—H3···N1ii | 0.84 (3) | 2.22 (3) | 3.035 (2) | 163 (3) |
N2—H2···N1iii | 0.78 (3) | 2.51 (3) | 3.286 (3) | 171 (3) |
O1—H1···N1iv | 0.83 (3) | 2.16 (3) | 2.988 (2) | 176 (3) |
Symmetry codes: (i) −x+1, −y, −z+1; (ii) −x, −y, −z+1; (iii) x, y+1, z; (iv) x+1, y+1, z. |
The interest in cadmium(II) complexes of thiourea (Tu) arises because some of them exhibit non-linear optical properties (Rajesh et al., 2004) and they are useful for the convenient preparation of cadmium sulfide based semiconducting materials by their thermal decomposition in air (Stoev et al., 1994). Several crystallographic reports about cadmium(II) complexes of thiourea reveal that it coordinates to cadmium(II) via the sulfur atom (Corao et al., 1969; Marcos et al., 1998; Wang et al., 2002). Recently, we have reported the crystal structures of cadmium(II) complexes of N,N'-dimethylthiourea (Dmtu), [Cd(Dmtu)2Cl2] (Malik et al., 2010) and tetramethylthiourea (Tmtu), [Cd(Tmtu)2Br2] (Nawaz et al., 2010a) and [Cd(Tmtu)2I2] (Nawaz et al., 2010b). Herein, we report the crystal structure of a cadmium cyanide complex of thiourea, biscyanidobis(thiourea-kS)cadmium(II) monohydrate, [Cd(Tu)2(CN)2].H2O. The present investigation was carried out in view of our continuous interest in the structural chemistry of cyanido complexes of d10 metal ions with thiourea type ligands (Ahmad et al., 2009; Hanif et al., 2007).
In the title compound, the Cd atom is situated on a twofold axis of symmetry and is bonded to two cyanide carbon atoms and two sulfur atoms of thiourea (Figure 1). The four coordinate metal ion adopts a severely distorted tetrahedral geometry, the bond angles being in the range of 95.76 (4) - 143.5 (1) °. The Cd—S and Cd—C bond lengths are 2.6363 (5) Å and 2.211 (2) Å respectively. These are in agreement with those reported for related compounds (Marcos et al., 1998; Malik et al. 2010; Nawaz et al., 2010a,b; Wang et al., 2002; Yoshikawa et al., 2003). The two C—N bond lengths in thiourea, C2—N2 and C2—N3, are 1.312 (2) Å and 1.305 (2) Å respectively. The CNH2 fragments of the two thiourea molecules are essentially planar, the maximum deviation from the mean plane being for the nitrogen atoms with 0.03 (1) Å. These values are consistent with a significant CN double bond character and electron delocalization in the SCN2 moiety. To the best of our knowledge, this is the first X-ray structure of a cadmium complex having both sulfur containing ligands and cyanide in its coordination sphere.
The molecules pack to form columns parallel to the b direction (Figure 2). Within these columns, each metal ion interacts with two sulfur atoms of a neighboring molecule (Cd···S: 3.3140 (5) Å), hence extending the tetra-coordinate inner-sphere to a hexa-coordinate outer-sphere with a distorted octahedral environment. These interactions confer to the molecular columns a polymeric chain character.
Intermolecular hydrogen bonding takes place through N—H···S as well as N—H···N(CN) interactions (Table 1). The complex molecules also interact with the water molecules through C—N···H—O and N—H···O bonds. In this scheme the water molecule is tetrahedrally hydrogen bonded to four complex molecules. This generates a three-dimensional hydrogen bonding network where the molecular chains are interconnected through hydrogen bonding either directly or through the water molecules.