


Supporting information
![]() | Crystallographic Information File (CIF) https://doi.org/10.1107/S2414314616000286/zs2360sup1.cif |
![]() | Structure factor file (CIF format) https://doi.org/10.1107/S2414314616000286/zs2360Isup2.hkl |
![]() | Portable Document Format (PDF) file https://doi.org/10.1107/S2414314616000286/zs2360Isup3.pdf |
![]() | Chemical Markup Language (CML) file https://doi.org/10.1107/S2414314616000286/zs2360Isup4.cml |
CCDC reference: 1445627
Key indicators
- Single-crystal X-ray study
- T = 90 K
- Mean
(C-C) = 0.005 Å
- Disorder in main residue
- R factor = 0.062
- wR factor = 0.179
- Data-to-parameter ratio = 9.7
checkCIF/PLATON results
No syntax errors found
Alert level B PLAT919_ALERT_3_B Reflection # Likely Affected by the Beamstop ... 2 Check PLAT934_ALERT_3_B Number of (Iobs-Icalc)/SigmaW > 10 Outliers .... 2 Check PLAT939_ALERT_3_B Large Value of Not (SHELXL) Weight Optimized S . 129.23
Alert level C PLAT088_ALERT_3_C Poor Data / Parameter Ratio .................... 9.66 Note PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) Range 3.4 Ratio PLAT220_ALERT_2_C Large Non-Solvent O Ueq(max)/Ueq(min) Range 3.1 Ratio PLAT222_ALERT_3_C Large Non-Solvent H Uiso(max)/Uiso(min) ... 4.1 Ratio PLAT334_ALERT_2_C Small Average Benzene C-C Dist. C1A -C14A 1.37 Ang. PLAT340_ALERT_3_C Low Bond Precision on C-C Bonds ............... 0.00446 Ang. PLAT906_ALERT_3_C Large K value in the Analysis of Variance ...... 12.052 Check PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.594 20 Report PLAT913_ALERT_3_C Missing # of Very Strong Reflections in FCF .... 1 Note PLAT918_ALERT_3_C Reflection(s) with I(obs) much Smaller I(calc) . 2 Check
Alert level G PLAT002_ALERT_2_G Number of Distance or Angle Restraints on AtSite 10 Note PLAT003_ALERT_2_G Number of Uiso or Uij Restrained non-H Atoms ... 47 Report PLAT083_ALERT_2_G SHELXL Second Parameter in WGHT Unusually Large 6.25 Why ? PLAT174_ALERT_4_G The CIF-Embedded .res File Contains FLAT Records 2 Report PLAT176_ALERT_4_G The CIF-Embedded .res File Contains SADI Records 5 Report PLAT178_ALERT_4_G The CIF-Embedded .res File Contains SIMU Records 1 Report PLAT301_ALERT_3_G Main Residue Disorder ............ Percentage = 27 Note PLAT380_ALERT_4_G Incorrectly? Oriented X(sp2)-Methyl Moiety ..... C7A Check PLAT432_ALERT_2_G Short Inter X...Y Contact O10 .. C13 .. 2.95 Ang. PLAT720_ALERT_4_G Number of Unusual/Non-Standard Labels .......... 10 Note PLAT811_ALERT_5_G No ADDSYM Analysis: Too Many Excluded Atoms .... ! Info PLAT860_ALERT_3_G Number of Least-Squares Restraints ............. 775 Note PLAT909_ALERT_3_G Percentage of Observed Data at Theta(Max) Still 57 %
0 ALERT level A = Most likely a serious problem - resolve or explain 3 ALERT level B = A potentially serious problem, consider carefully 10 ALERT level C = Check. Ensure it is not caused by an omission or oversight 13 ALERT level G = General information/check it is not something unexpected 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 7 ALERT type 2 Indicator that the structure model may be wrong or deficient 13 ALERT type 3 Indicator that the structure quality may be low 5 ALERT type 4 Improvement, methodology, query or suggestion 1 ALERT type 5 Informative message, check
The title compound was synthesized as follows (Fig. 3). Acetic anhydride (1 ml) was added to a solution of quercetin (2 mmol) in anhydrous pyridine (8 ml) at room temperature. The reaction mixture was stirred for 10 h at 343 K. After completion of reaction, the resultant mixture was cooled to room temperature, then poured into ice-cold water. The precipitate was separated by filtration and then washed with ice-cold water. The resulting precipitate was filtered and finally recrystallized from methanol. Single crystals of the title compound suitable for X-ray analysis were obtained by slow evaporation of an ethanolic solution at room temperature.
m.p. 465–467 K; δH (400 MHz CDCl3) 7.75–7.67 (2H, m), 7.36 (1H, s), 7.33 (1H, J = 1.8 Hz, d), 6.87 (1H, J = 2.1 Hz, d), 2.42 (3H, s), 2.37–2.31 (12H, m). FABMS: MH+, 511.
Crystal data, data collection and structure refinement details are summarized in Table 2. Disorder was identified in the benzene ring and one of its acetyl substituent groups and the major and minor components A and B were included with refined occupancy factors of 0.523 (5) and 0.477 (5), respectively. Two low-angle reflections were considered to be affected by the beamstop during data collection, prompting a B-Alert in the checkCIF report.
Quercetin is the most studied and an important class of flavonoid found in vegetables, fruits and grains. Quercitin and its derivatives are valuable due to their important properties as anti-oxidative (Chopra et al., 2000), anticarcinogenic (Pereira et al., 1996), anti-inflammatory (Ferry et al., 1996) and anti-aggregatory agents (Pignatelli et al., 2000) and their vasodilating effects (Perez-Vizcaino et al., 2002). Acetylated quercetin derivatives have been used as HIV-1 integrase inhibitors for the treatment of HIV-1 infection (Li et al., 2014) as well as to evaluate the cell proliferation inhibition and apoptosis in HL-60 cells (Sakao et al., 2009). Thus, the elucidation of the crystal structures of quercetin derivatives has attracted much attention. Here,we report the crystal structure of the title compound, the pentaacetyl-substituted quercitin derivative, C25H20O12.
In the title compound (Fig. 1), the benzene ring and one of its methoxy substituent groups, defined by C1A—C14A···C2A— O1A—C6AA—O2A is disordered, giving the alternative component C1B—C14B···C2B—O1B—C6B— O2B with a site occupancy ratio of 0.523/0.477. The dihedral angle between the major component (A) and the benzene ring of the benzopyranone moiety (defined by C2—C3···C12) is 10.8 (6)°. The conformations of the two acetyl groups A and B are very different [torsion angles C1A/B —C2A/B—O1A/B—C6A/B are 67.6 (12) and −106.1 (11)°, respectively]. In the crystal (Fig. 2), only weak C—H···O hydrogen-bonding interactions are present (Table 1), giving chains extending along b.
For background and medical applications of quercitin derivatives, see: Chopra et al. (2000); Pereira et al. (1996); Ferry et al. (1996); Pignatelli et al. (2000); Perez-Vizcaino et al. (2002); Li et al. (2014); Sakao et al. (2009).
Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS2014 (Sheldrick, 2008); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015); molecular graphics: Mercury (Macrae et al., 2008) and PLATON (Spek, 2009); software used to prepare material for publication: SHELXL2014 (Sheldrick, 2015).
C25H20O12 | Dx = 1.435 Mg m−3 |
Mr = 512.41 | Melting point = 465–467 K |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 25664 reflections |
a = 20.944 (6) Å | θ = 1.7–19.9° |
b = 9.316 (3) Å | µ = 0.12 mm−1 |
c = 24.309 (7) Å | T = 90 K |
V = 4743 (2) Å3 | Prism, yellow |
Z = 8 | 0.30 × 0.20 × 0.15 mm |
F(000) = 2128 |
Bruker APEXII CCD diffractometer | 4165 independent reflections |
Radiation source: fine-focus sealed tube | 3329 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.065 |
Detector resolution: 8.333 pixels mm-1 | θmax = 25.0°, θmin = 1.7° |
ω scans | h = −24→24 |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | k = −11→11 |
Tmin = 0.805, Tmax = 0.983 | l = −28→28 |
42484 measured reflections |
Refinement on F2 | 775 restraints |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.062 | H-atom parameters constrained |
wR(F2) = 0.179 | w = 1/[σ2(Fo2) + (0.0743P)2 + 6.2477P] where P = (Fo2 + 2Fc2)/3 |
S = 1.21 | (Δ/σ)max = 0.003 |
4145 reflections | Δρmax = 0.34 e Å−3 |
429 parameters | Δρmin = −0.39 e Å−3 |
C25H20O12 | V = 4743 (2) Å3 |
Mr = 512.41 | Z = 8 |
Orthorhombic, Pbca | Mo Kα radiation |
a = 20.944 (6) Å | µ = 0.12 mm−1 |
b = 9.316 (3) Å | T = 90 K |
c = 24.309 (7) Å | 0.30 × 0.20 × 0.15 mm |
Bruker APEXII CCD diffractometer | 4165 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 3329 reflections with I > 2σ(I) |
Tmin = 0.805, Tmax = 0.983 | Rint = 0.065 |
42484 measured reflections |
R[F2 > 2σ(F2)] = 0.062 | 775 restraints |
wR(F2) = 0.179 | H-atom parameters constrained |
S = 1.21 | Δρmax = 0.34 e Å−3 |
4145 reflections | Δρmin = −0.39 e Å−3 |
429 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
C1 | 0.06601 (18) | 1.1281 (4) | 0.11576 (17) | 0.0369 (9) | |
C2 | 0.15863 (14) | 0.9957 (3) | 0.09647 (13) | 0.0200 (7) | |
C3 | 0.16239 (14) | 0.8854 (3) | 0.13579 (12) | 0.0177 (6) | |
C4 | 0.22412 (14) | 0.8435 (3) | 0.15093 (12) | 0.0181 (6) | |
C5 | 0.18454 (15) | 0.6718 (3) | 0.21506 (12) | 0.0199 (7) | |
C9 | 0.29542 (18) | 0.3080 (4) | 0.42104 (14) | 0.0307 (8) | |
C10 | 0.0014 (2) | 1.1652 (5) | 0.0935 (2) | 0.0582 (13) | |
H10A | −0.0287 | 1.0927 | 0.1042 | 0.087* | |
H10B | 0.0034 | 1.1704 | 0.0541 | 0.087* | |
H10C | −0.0118 | 1.2564 | 0.1080 | 0.087* | |
C11 | 0.21171 (15) | 1.0560 (3) | 0.07290 (12) | 0.0195 (7) | |
H11 | 0.2080 | 1.1275 | 0.0464 | 0.023* | |
C12 | 0.27162 (14) | 1.0068 (3) | 0.08978 (12) | 0.0172 (6) | |
C13 | 0.37350 (15) | 1.0017 (4) | 0.04557 (13) | 0.0226 (7) | |
C14 | 0.42571 (16) | 1.1000 (4) | 0.02728 (14) | 0.0309 (8) | |
H14A | 0.4663 | 1.0584 | 0.0362 | 0.046* | |
H14B | 0.4214 | 1.1908 | 0.0456 | 0.046* | |
H14C | 0.4229 | 1.1140 | −0.0118 | 0.046* | |
C15 | 0.27911 (14) | 0.9016 (3) | 0.12845 (12) | 0.0178 (6) | |
H15 | 0.3194 | 0.8703 | 0.1392 | 0.021* | |
C16 | 0.12419 (14) | 0.7042 (3) | 0.20045 (12) | 0.0199 (7) | |
C17 | 0.03850 (16) | 0.5420 (4) | 0.19534 (14) | 0.0286 (8) | |
C18 | −0.0154 (2) | 0.4829 (5) | 0.22801 (18) | 0.0556 (12) | |
H18A | −0.0424 | 0.5600 | 0.2401 | 0.083* | |
H18B | 0.0010 | 0.4325 | 0.2594 | 0.083* | |
H18C | −0.0397 | 0.4179 | 0.2056 | 0.083* | |
C19 | 0.10733 (14) | 0.8136 (3) | 0.16025 (12) | 0.0186 (7) | |
C20 | 0.3000 (2) | 0.1807 (4) | 0.45795 (15) | 0.0466 (11) | |
H20A | 0.3303 | 0.1138 | 0.4431 | 0.070* | |
H20B | 0.2590 | 0.1355 | 0.4608 | 0.070* | |
H20C | 0.3138 | 0.2109 | 0.4938 | 0.070* | |
C1A | 0.2481 (7) | 0.371 (2) | 0.3341 (8) | 0.0212 (19) | 0.523 (5) |
C2A | 0.1875 (3) | 0.3714 (7) | 0.3196 (3) | 0.0214 (13) | 0.523 (5) |
C3A | 0.1651 (3) | 0.4643 (8) | 0.2808 (3) | 0.0210 (14) | 0.523 (5) |
H3AA | 0.1221 | 0.4626 | 0.2716 | 0.025* | 0.523 (5) |
C4A | 0.2058 (14) | 0.562 (3) | 0.2545 (12) | 0.021 (2) | 0.523 (5) |
C5A | 0.2722 (12) | 0.5569 (19) | 0.2685 (7) | 0.021 (2) | 0.523 (5) |
H5AA | 0.3009 | 0.6171 | 0.2506 | 0.025* | 0.523 (5) |
C6A | 0.1296 (3) | 0.2842 (7) | 0.3962 (3) | 0.0299 (15) | 0.523 (5) |
C7A | 0.0733 (8) | 0.2110 (15) | 0.4167 (7) | 0.035 (3) | 0.523 (5) |
H7AA | 0.0580 | 0.1453 | 0.3893 | 0.053* | 0.523 (5) |
H7AB | 0.0840 | 0.1589 | 0.4495 | 0.053* | 0.523 (5) |
H7AC | 0.0407 | 0.2801 | 0.4249 | 0.053* | 0.523 (5) |
C1B | 0.2584 (8) | 0.380 (2) | 0.3359 (9) | 0.021 (2) | 0.477 (5) |
C2B | 0.1922 (4) | 0.4237 (9) | 0.3362 (3) | 0.0271 (15) | 0.477 (5) |
C3B | 0.1683 (4) | 0.5189 (9) | 0.2988 (3) | 0.0247 (16) | 0.477 (5) |
H3BA | 0.1256 | 0.5462 | 0.2998 | 0.030* | 0.477 (5) |
C4B | 0.2102 (16) | 0.575 (3) | 0.2584 (13) | 0.020 (2) | 0.477 (5) |
C5B | 0.2721 (13) | 0.538 (2) | 0.2600 (8) | 0.021 (2) | 0.477 (5) |
H5BA | 0.3003 | 0.5804 | 0.2352 | 0.025* | 0.477 (5) |
C6B | 0.1097 (4) | 0.2669 (7) | 0.3641 (3) | 0.0257 (15) | 0.477 (5) |
C7B | 0.0828 (9) | 0.1796 (16) | 0.4078 (7) | 0.034 (4) | 0.477 (5) |
H7BA | 0.0908 | 0.2246 | 0.4426 | 0.051* | 0.477 (5) |
H7BB | 0.0376 | 0.1702 | 0.4023 | 0.051* | 0.477 (5) |
H7BC | 0.1022 | 0.0862 | 0.4072 | 0.051* | 0.477 (5) |
O1 | 0.08826 (13) | 1.1645 (3) | 0.15904 (12) | 0.0444 (7) | |
O2 | 0.09928 (10) | 1.0439 (2) | 0.07868 (9) | 0.0276 (6) | |
O3 | 0.23438 (9) | 0.7396 (2) | 0.19011 (8) | 0.0198 (5) | |
O5 | 0.27204 (11) | 0.2696 (2) | 0.37146 (9) | 0.0297 (6) | |
O6 | 0.30964 (17) | 0.4278 (3) | 0.43146 (12) | 0.0604 (10) | |
O7 | 0.32388 (10) | 1.0796 (2) | 0.06773 (9) | 0.0204 (5) | |
O8 | 0.37262 (11) | 0.8752 (3) | 0.04125 (10) | 0.0323 (6) | |
O9 | 0.07285 (10) | 0.6385 (2) | 0.22703 (9) | 0.0234 (5) | |
O10 | 0.05366 (12) | 0.5113 (3) | 0.14961 (10) | 0.0360 (6) | |
O11 | 0.05105 (10) | 0.8403 (2) | 0.14948 (9) | 0.0257 (5) | |
O1A | 0.1440 (2) | 0.2725 (5) | 0.34135 (18) | 0.0257 (11) | 0.523 (5) |
O2A | 0.1551 (3) | 0.3705 (6) | 0.4252 (2) | 0.0500 (17) | 0.523 (5) |
C14A | 0.2939 (9) | 0.4632 (14) | 0.3083 (5) | 0.022 (2) | 0.523 (5) |
H14D | 0.3368 | 0.4602 | 0.3181 | 0.027* | 0.523 (5) |
O1B | 0.1528 (3) | 0.3714 (6) | 0.3783 (2) | 0.0365 (13) | 0.477 (5) |
O2B | 0.1042 (2) | 0.2270 (6) | 0.3176 (2) | 0.0369 (15) | 0.477 (5) |
C14B | 0.2953 (10) | 0.4398 (16) | 0.2979 (6) | 0.021 (2) | 0.477 (5) |
H14E | 0.3383 | 0.4148 | 0.2966 | 0.026* | 0.477 (5) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.034 (2) | 0.032 (2) | 0.045 (2) | 0.0022 (16) | 0.0031 (17) | 0.0078 (17) |
C2 | 0.0195 (15) | 0.0191 (15) | 0.0214 (16) | 0.0019 (12) | −0.0029 (13) | −0.0015 (12) |
C3 | 0.0219 (15) | 0.0173 (15) | 0.0140 (14) | 0.0006 (12) | 0.0012 (12) | −0.0021 (12) |
C4 | 0.0248 (16) | 0.0150 (15) | 0.0146 (14) | 0.0011 (12) | 0.0008 (12) | −0.0009 (12) |
C5 | 0.0223 (16) | 0.0197 (15) | 0.0177 (15) | −0.0027 (13) | 0.0044 (12) | 0.0013 (12) |
C9 | 0.046 (2) | 0.0201 (18) | 0.0264 (17) | −0.0003 (15) | −0.0106 (15) | 0.0016 (14) |
C10 | 0.037 (2) | 0.062 (3) | 0.076 (3) | 0.017 (2) | 0.003 (2) | 0.018 (3) |
C11 | 0.0264 (16) | 0.0138 (15) | 0.0181 (15) | −0.0002 (12) | −0.0015 (13) | 0.0023 (12) |
C12 | 0.0228 (16) | 0.0127 (14) | 0.0160 (14) | −0.0040 (12) | 0.0019 (12) | −0.0034 (12) |
C13 | 0.0247 (17) | 0.0286 (19) | 0.0145 (15) | −0.0010 (14) | 0.0018 (13) | 0.0011 (13) |
C14 | 0.0236 (18) | 0.044 (2) | 0.0255 (18) | −0.0108 (16) | 0.0051 (14) | −0.0027 (16) |
C15 | 0.0185 (15) | 0.0166 (15) | 0.0184 (15) | 0.0011 (12) | −0.0002 (12) | −0.0024 (12) |
C16 | 0.0213 (16) | 0.0193 (15) | 0.0190 (15) | −0.0036 (12) | 0.0044 (12) | 0.0010 (12) |
C17 | 0.0312 (18) | 0.0279 (18) | 0.0267 (18) | −0.0060 (15) | −0.0012 (15) | 0.0064 (15) |
C18 | 0.055 (3) | 0.069 (3) | 0.043 (2) | −0.033 (2) | 0.005 (2) | 0.007 (2) |
C19 | 0.0195 (16) | 0.0186 (15) | 0.0178 (15) | −0.0004 (12) | −0.0004 (12) | −0.0040 (12) |
C20 | 0.091 (3) | 0.0222 (19) | 0.0269 (19) | −0.004 (2) | −0.018 (2) | 0.0061 (16) |
C1A | 0.033 (4) | 0.015 (3) | 0.016 (3) | −0.004 (3) | −0.005 (3) | 0.000 (3) |
C2A | 0.026 (3) | 0.018 (3) | 0.020 (3) | −0.004 (2) | 0.000 (2) | −0.001 (2) |
C3A | 0.023 (3) | 0.018 (3) | 0.022 (3) | −0.004 (3) | 0.000 (3) | 0.000 (2) |
C4A | 0.024 (4) | 0.019 (4) | 0.019 (4) | −0.003 (3) | 0.000 (3) | −0.001 (3) |
C5A | 0.028 (3) | 0.016 (4) | 0.018 (4) | −0.005 (3) | −0.002 (4) | −0.003 (3) |
C6A | 0.034 (3) | 0.029 (3) | 0.027 (3) | −0.003 (3) | 0.005 (3) | 0.001 (3) |
C7A | 0.028 (6) | 0.058 (7) | 0.020 (5) | −0.014 (5) | 0.014 (3) | 0.002 (5) |
C1B | 0.031 (4) | 0.015 (3) | 0.017 (3) | −0.001 (3) | −0.006 (3) | −0.004 (3) |
C2B | 0.038 (3) | 0.024 (3) | 0.019 (3) | −0.011 (3) | −0.001 (3) | 0.002 (3) |
C3B | 0.030 (3) | 0.024 (3) | 0.020 (3) | −0.008 (3) | 0.001 (3) | −0.001 (3) |
C4B | 0.026 (4) | 0.017 (4) | 0.018 (4) | −0.007 (3) | 0.001 (3) | 0.001 (3) |
C5B | 0.029 (3) | 0.015 (4) | 0.018 (4) | −0.006 (3) | −0.001 (4) | −0.004 (3) |
C6B | 0.026 (3) | 0.029 (3) | 0.023 (3) | 0.002 (3) | −0.001 (3) | 0.005 (3) |
C7B | 0.025 (6) | 0.050 (6) | 0.026 (6) | −0.008 (5) | 0.003 (4) | −0.006 (5) |
O1 | 0.0471 (16) | 0.0365 (16) | 0.0497 (18) | 0.0059 (13) | 0.0068 (14) | −0.0009 (13) |
O2 | 0.0228 (12) | 0.0310 (13) | 0.0290 (13) | 0.0044 (10) | −0.0031 (10) | 0.0084 (10) |
O3 | 0.0189 (11) | 0.0204 (11) | 0.0200 (11) | 0.0001 (9) | 0.0016 (8) | 0.0067 (9) |
O5 | 0.0512 (15) | 0.0180 (12) | 0.0199 (11) | 0.0003 (10) | −0.0083 (10) | 0.0009 (9) |
O6 | 0.112 (3) | 0.0216 (15) | 0.0476 (17) | −0.0083 (15) | −0.0493 (18) | 0.0033 (13) |
O7 | 0.0214 (11) | 0.0161 (11) | 0.0238 (11) | −0.0030 (9) | 0.0033 (9) | 0.0017 (9) |
O8 | 0.0392 (14) | 0.0251 (14) | 0.0326 (14) | 0.0042 (11) | 0.0131 (11) | 0.0013 (11) |
O9 | 0.0208 (11) | 0.0291 (12) | 0.0205 (11) | −0.0060 (9) | 0.0045 (9) | 0.0025 (9) |
O10 | 0.0475 (16) | 0.0306 (14) | 0.0299 (14) | −0.0111 (12) | 0.0027 (12) | −0.0028 (11) |
O11 | 0.0201 (12) | 0.0267 (13) | 0.0303 (13) | −0.0006 (9) | −0.0004 (10) | 0.0032 (10) |
O1A | 0.030 (2) | 0.024 (2) | 0.024 (2) | −0.006 (2) | −0.002 (2) | 0.0069 (18) |
O2A | 0.070 (4) | 0.044 (3) | 0.037 (3) | −0.029 (3) | 0.023 (3) | −0.014 (3) |
C14A | 0.029 (3) | 0.018 (4) | 0.020 (4) | 0.001 (3) | −0.007 (3) | −0.006 (3) |
O1B | 0.048 (3) | 0.038 (3) | 0.023 (3) | −0.018 (2) | 0.000 (2) | 0.009 (2) |
O2B | 0.029 (3) | 0.037 (3) | 0.045 (3) | −0.007 (2) | 0.006 (3) | −0.005 (3) |
C14B | 0.029 (3) | 0.017 (4) | 0.018 (4) | 0.002 (3) | −0.007 (3) | −0.005 (3) |
C1—O1 | 1.200 (5) | C19—O11 | 1.233 (4) |
C1—O2 | 1.383 (5) | C20—H20A | 0.9600 |
C1—C10 | 1.497 (6) | C20—H20B | 0.9600 |
C2—C11 | 1.371 (4) | C20—H20C | 0.9600 |
C2—O2 | 1.391 (4) | C1A—O5 | 1.40 (2) |
C2—C3 | 1.406 (4) | C1A—C2A | 1.315 (18) |
C3—C4 | 1.400 (4) | C1A—C14A | 1.43 (3) |
C3—C19 | 1.459 (4) | C2A—C3A | 1.363 (9) |
C4—O3 | 1.375 (4) | C2A—O1A | 1.400 (7) |
C4—C15 | 1.385 (4) | C3A—C4A | 1.40 (3) |
C5—C16 | 1.347 (4) | C3A—H3AA | 0.9300 |
C5—O3 | 1.362 (4) | C4A—C5A | 1.43 (4) |
C5—C4B | 1.49 (3) | C5A—C14A | 1.38 (2) |
C5—C4A | 1.47 (3) | C5A—H5AA | 0.9300 |
C9—O6 | 1.183 (4) | C6A—O2A | 1.194 (7) |
C9—O5 | 1.349 (4) | C6A—O1A | 1.373 (7) |
C9—C20 | 1.490 (5) | C6A—C7A | 1.449 (10) |
C10—H10A | 0.9600 | C7A—H7AA | 0.9600 |
C10—H10B | 0.9600 | C7A—H7AB | 0.9600 |
C10—H10C | 0.9600 | C7A—H7AC | 0.9600 |
C11—C12 | 1.397 (4) | C1B—C14B | 1.33 (3) |
C11—H11 | 0.9300 | C1B—C2B | 1.44 (2) |
C12—C15 | 1.368 (4) | C1B—O5 | 1.37 (3) |
C12—O7 | 1.394 (4) | C2B—C3B | 1.365 (11) |
C13—O8 | 1.184 (4) | C2B—O1B | 1.402 (7) |
C13—O7 | 1.377 (4) | C3B—C4B | 1.42 (3) |
C13—C14 | 1.494 (4) | C3B—H3BA | 0.9300 |
C14—H14A | 0.9600 | C4B—C5B | 1.34 (5) |
C14—H14B | 0.9600 | C5B—C14B | 1.39 (2) |
C14—H14C | 0.9600 | C5B—H5BA | 0.9300 |
C15—H15 | 0.9300 | C6B—O2B | 1.197 (7) |
C16—O9 | 1.395 (4) | C6B—O1B | 1.371 (7) |
C16—C19 | 1.456 (4) | C6B—C7B | 1.450 (11) |
C17—O10 | 1.191 (4) | C7B—H7BA | 0.9600 |
C17—O9 | 1.386 (4) | C7B—H7BB | 0.9600 |
C17—C18 | 1.486 (5) | C7B—H7BC | 0.9600 |
C18—H18A | 0.9600 | C14A—H14D | 0.9300 |
C18—H18B | 0.9600 | C14B—H14E | 0.9300 |
C18—H18C | 0.9600 | ||
O1—C1—O2 | 122.4 (3) | H20B—C20—H20C | 109.5 |
O1—C1—C10 | 127.0 (4) | O5—C1A—C2A | 121.5 (15) |
O2—C1—C10 | 110.6 (4) | O5—C1A—C14A | 116.5 (14) |
C11—C2—O2 | 117.6 (3) | C2A—C1A—C14A | 122 (2) |
C11—C2—C3 | 122.6 (3) | C3A—C2A—C1A | 121.3 (11) |
O2—C2—C3 | 119.9 (3) | C3A—C2A—O1A | 117.1 (6) |
C4—C3—C2 | 115.7 (3) | C1A—C2A—O1A | 121.5 (11) |
C4—C3—C19 | 119.7 (3) | C2A—C3A—C4A | 121.3 (13) |
C2—C3—C19 | 124.6 (3) | C2A—C3A—H3AA | 119.4 |
O3—C4—C15 | 114.7 (3) | C4A—C3A—H3AA | 119.4 |
O3—C4—C3 | 121.5 (3) | C5A—C4A—C3A | 117 (2) |
C15—C4—C3 | 123.8 (3) | C5A—C4A—C5 | 118 (2) |
C16—C5—O3 | 119.9 (3) | C3A—C4A—C5 | 124 (2) |
C16—C5—C4B | 131.4 (13) | C14A—C5A—C4A | 121 (2) |
O3—C5—C4B | 108.7 (12) | C14A—C5A—H5AA | 119.7 |
C16—C5—C4A | 127.8 (12) | C4A—C5A—H5AA | 119.7 |
O3—C5—C4A | 112.3 (12) | O2A—C6A—O1A | 121.8 (6) |
O6—C9—O5 | 122.2 (3) | O2A—C6A—C7A | 118.6 (9) |
O6—C9—C20 | 127.3 (3) | O1A—C6A—C7A | 118.4 (9) |
O5—C9—C20 | 110.5 (3) | C6A—C7A—H7AA | 109.5 |
C1—C10—H10A | 109.5 | C6A—C7A—H7AB | 109.5 |
C1—C10—H10B | 109.5 | H7AA—C7A—H7AB | 109.5 |
H10A—C10—H10B | 109.5 | C6A—C7A—H7AC | 109.5 |
C1—C10—H10C | 109.5 | H7AA—C7A—H7AC | 109.5 |
H10A—C10—H10C | 109.5 | H7AB—C7A—H7AC | 109.5 |
H10B—C10—H10C | 109.5 | C14B—C1B—C2B | 116 (2) |
C2—C11—C12 | 118.1 (3) | C14B—C1B—O5 | 129.2 (16) |
C2—C11—H11 | 120.9 | C2B—C1B—O5 | 114.0 (16) |
C12—C11—H11 | 120.9 | C3B—C2B—C1B | 122.1 (12) |
C15—C12—O7 | 121.5 (3) | C3B—C2B—O1B | 119.7 (7) |
C15—C12—C11 | 122.7 (3) | C1B—C2B—O1B | 118.1 (12) |
O7—C12—C11 | 115.6 (3) | C2B—C3B—C4B | 118.3 (15) |
O8—C13—O7 | 123.2 (3) | C2B—C3B—H3BA | 120.8 |
O8—C13—C14 | 126.5 (3) | C4B—C3B—H3BA | 120.8 |
O7—C13—C14 | 110.3 (3) | C5B—C4B—C3B | 119 (3) |
C13—C14—H14A | 109.5 | C5B—C4B—C5 | 122 (3) |
C13—C14—H14B | 109.5 | C3B—C4B—C5 | 119 (2) |
H14A—C14—H14B | 109.5 | C4B—C5B—C14B | 122 (2) |
C13—C14—H14C | 109.5 | C4B—C5B—H5BA | 119.2 |
H14A—C14—H14C | 109.5 | C14B—C5B—H5BA | 119.2 |
H14B—C14—H14C | 109.5 | O2B—C6B—O1B | 121.4 (7) |
C12—C15—C4 | 117.1 (3) | O2B—C6B—C7B | 118.7 (9) |
C12—C15—H15 | 121.4 | O1B—C6B—C7B | 118.0 (10) |
C4—C15—H15 | 121.4 | C6B—C7B—H7BA | 109.5 |
C5—C16—O9 | 120.2 (3) | C6B—C7B—H7BB | 109.5 |
C5—C16—C19 | 124.1 (3) | H7BA—C7B—H7BB | 109.5 |
O9—C16—C19 | 115.5 (3) | C6B—C7B—H7BC | 109.5 |
O10—C17—O9 | 122.4 (3) | H7BA—C7B—H7BC | 109.5 |
O10—C17—C18 | 127.8 (3) | H7BB—C7B—H7BC | 109.5 |
O9—C17—C18 | 109.7 (3) | C1—O2—C2 | 115.5 (3) |
C17—C18—H18A | 109.5 | C5—O3—C4 | 121.0 (2) |
C17—C18—H18B | 109.5 | C9—O5—C1A | 122.1 (6) |
H18A—C18—H18B | 109.5 | C9—O5—C1B | 116.0 (6) |
C17—C18—H18C | 109.5 | C13—O7—C12 | 119.1 (2) |
H18A—C18—H18C | 109.5 | C17—O9—C16 | 115.3 (2) |
H18B—C18—H18C | 109.5 | C6A—O1A—C2A | 117.3 (5) |
O11—C19—C16 | 121.0 (3) | C5A—C14A—C1A | 117.7 (17) |
O11—C19—C3 | 125.2 (3) | C5A—C14A—H14D | 121.1 |
C16—C19—C3 | 113.7 (3) | C1A—C14A—H14D | 121.1 |
C9—C20—H20A | 109.5 | C6B—O1B—C2B | 116.8 (6) |
C9—C20—H20B | 109.5 | C1B—C14B—C5B | 122.4 (19) |
H20A—C20—H20B | 109.5 | C1B—C14B—H14E | 118.8 |
C9—C20—H20C | 109.5 | C5B—C14B—H14E | 118.8 |
H20A—C20—H20C | 109.5 | ||
C6A—O1A—C2A—C1A | 67.6 (12) | O2—C2—C11—C12 | −179.0 (3) |
C6A—O1A—C2A—C3A | −115.3 (7) | O2—C2—C3—C19 | 0.5 (4) |
C2A—O1A—C6A—C7A | 163.8 (8) | O2—C2—C3—C4 | 179.7 (3) |
C2A—O1A—C6A—O2A | −3.5 (9) | C1A—C2A—C3A—C4A | 1 (2) |
C6B—O1B—C2B—C1B | −106.1 (11) | O1A—C2A—C3A—C4A | −176.5 (15) |
C6B—O1B—C2B—C3B | 77.2 (9) | C2—C3—C19—O11 | 0.2 (5) |
C2B—O1B—C6B—C7B | 161.1 (10) | C4—C3—C19—C16 | 1.6 (4) |
C2B—O1B—C6B—O2B | −3.1 (11) | C2—C3—C19—C16 | −179.3 (3) |
C2—O2—C1—C10 | −176.3 (3) | C19—C3—C4—C15 | 177.5 (3) |
C1—O2—C2—C11 | −108.2 (3) | C2—C3—C4—O3 | 178.2 (3) |
C2—O2—C1—O1 | 4.3 (5) | C19—C3—C4—O3 | −2.6 (4) |
C1—O2—C2—C3 | 74.1 (3) | C2—C3—C4—C15 | −1.7 (4) |
C5—O3—C4—C15 | −179.0 (2) | C4—C3—C19—O11 | −179.0 (3) |
C4—O3—C5—C4A | 178.5 (12) | C2A—C3A—C4A—C5A | 2 (3) |
C4—O3—C5—C16 | 1.5 (4) | C2A—C3A—C4A—C5 | −175.7 (15) |
C5—O3—C4—C3 | 1.1 (4) | O3—C4—C15—C12 | −179.2 (2) |
C9—O5—C1A—C14A | 70.9 (16) | C3—C4—C15—C12 | 0.7 (4) |
C1A—O5—C9—C20 | 163.8 (8) | C5A—C4A—C5—C16 | −173.0 (13) |
C1A—O5—C9—O6 | −16.3 (9) | C3A—C4A—C5A—C14A | −3 (3) |
C9—O5—C1A—C2A | −115.6 (14) | C5A—C4A—C5—O3 | 10 (2) |
C13—O7—C12—C11 | −131.8 (3) | C3A—C4A—C5—C16 | 5 (3) |
C12—O7—C13—C14 | −176.9 (3) | C3A—C4A—C5—O3 | −171.8 (18) |
C12—O7—C13—O8 | 4.6 (4) | C5—C4A—C5A—C14A | 175.2 (16) |
C13—O7—C12—C15 | 52.9 (4) | C4A—C5—C16—C19 | −179.0 (14) |
C17—O9—C16—C5 | −110.5 (3) | C4A—C5—C16—O9 | 5.6 (15) |
C17—O9—C16—C19 | 73.7 (3) | O3—C5—C16—C19 | −2.6 (4) |
C16—O9—C17—C18 | −178.6 (3) | O3—C5—C16—O9 | −178.0 (2) |
C16—O9—C17—O10 | 3.9 (5) | C4A—C5A—C14A—C1A | 1 (3) |
O5—C1A—C14A—C5A | 175.5 (13) | C2—C11—C12—C15 | 0.2 (4) |
C14A—C1A—C2A—C3A | −3 (2) | C2—C11—C12—O7 | −175.1 (3) |
O5—C1A—C2A—O1A | 1 (2) | O7—C12—C15—C4 | 175.1 (3) |
C2A—C1A—C14A—C5A | 2 (2) | C11—C12—C15—C4 | 0.1 (4) |
O5—C1A—C2A—C3A | −176.0 (10) | O9—C16—C19—O11 | −2.9 (4) |
C14A—C1A—C2A—O1A | 174.2 (12) | C5—C16—C19—C3 | 1.0 (4) |
C11—C2—C3—C19 | −177.2 (3) | O9—C16—C19—C3 | 176.6 (2) |
C11—C2—C3—C4 | 2.0 (4) | C5—C16—C19—O11 | −178.5 (3) |
C3—C2—C11—C12 | −1.3 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
C3A—H3AA···O9 | 0.93 | 2.22 | 2.842 (7) | 124 |
C5A—H5AA···O3 | 0.93 | 2.32 | 2.675 (18) | 102 |
C7A—H7AB···O8i | 0.96 | 2.43 | 3.331 (17) | 156 |
C20—H20A···O2Aii | 0.96 | 2.33 | 3.142 (7) | 142 |
C20—H20B···O6ii | 0.96 | 2.51 | 3.352 (5) | 146 |
Symmetry codes: (i) −x+1/2, −y+1, z+1/2; (ii) −x+1/2, y−1/2, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
C7A—H7AB···O8i | 0.96 | 2.43 | 3.331 (17) | 156 |
C20—H20A···O2Aii | 0.96 | 2.33 | 3.142 (7) | 142 |
C20—H20B···O6ii | 0.96 | 2.51 | 3.352 (5) | 146 |
Symmetry codes: (i) −x+1/2, −y+1, z+1/2; (ii) −x+1/2, y−1/2, z. |
Experimental details
Crystal data | |
Chemical formula | C25H20O12 |
Mr | 512.41 |
Crystal system, space group | Orthorhombic, Pbca |
Temperature (K) | 90 |
a, b, c (Å) | 20.944 (6), 9.316 (3), 24.309 (7) |
V (Å3) | 4743 (2) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.12 |
Crystal size (mm) | 0.30 × 0.20 × 0.15 |
Data collection | |
Diffractometer | Bruker APEXII CCD |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.805, 0.983 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 42484, 4165, 3329 |
Rint | 0.065 |
(sin θ/λ)max (Å−1) | 0.594 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.062, 0.179, 1.21 |
No. of reflections | 4145 |
No. of parameters | 429 |
No. of restraints | 775 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.34, −0.39 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXS2014 (Sheldrick, 2008), SHELXL2014 (Sheldrick, 2015), Mercury (Macrae et al., 2008) and PLATON (Spek, 2009).
Quercetin is the most studied and an important class of flavonoid found in vegetables, fruits and grains. Quercitin and its derivatives have been valuable due to their important properties as antioxidative (Chopra et al., 2000), anticarcinogenic (Pereira et al., 1996), anti-inflammatory (Ferry et al., 1996) and anti-aggregatory agents (Pignatelli et al., 2000) and their vasodilating effects (Pérez-Vizcaíno et al., 2002). Acetylated quercetin derivatives were used as HIV-1 integrase inhibitors for the treatment of HIV-1 infection (Li et al., 2014). They were also used to evaluate the cell proliferation inhibition and apoptosis in HL-60 cells (Sakao et al., 2009). Thus, the elucidation of the crystal structures of quercetin derivatives has attracted much attention. Here,we report the crystal structure of the title compound, the pentaacetyl- substituted quercitin derivative, C25H20O12.
In the title compound (Fig. 1), the benzene ring and one of its methoxy substituent groups, defined by C1A—C14A···C2A— O1A—C6AA—O2A is disordered, giving the alternative component C1B—C14B···C2B—O1B—C6B— O2B with a site occupancy factor of 0.523/0.477. The dihedral angle between the major component (A) and the benzene ring of the benzopyranone moiety (defined by C2—C3···C12) is 10.8 (6)°. The conformations of the two acetyl groups A and B are very different [torsion angles C1A/B —C2A/B—O1A/B—C6A/B are 67.6 (12) and −106.1 (11)°, respectively]. In the crystal (Fig. 2), only weak intermolecular C—H···O hydrogen-bonding interactions are present (Table 1), giving chains extending along b.