The two epimers from the unusual thermal C6-epimerization of 5-oxo-1,2,3,5,5a,6,7,9b-octahydro-7,9a-epoxypyrrolo[2,1-a]isoindole-6-carboxylic acid, 5a(RS),6(SR),7(RS),9a(SR),9b(SR) and 5a(RS),6(RS),7(RS),9a(SR),9b(SR) have similar geometries but differ in their hydrogen-bonded crystal-packing modes
Supporting information
CCDC references: 1503860; 1503859
Key indicators
Structure: Ia
- Single-crystal synchrotron study
- T = 100 K
- Mean
(C-C) = 0.003 Å
- R factor = 0.072
- wR factor = 0.189
- Data-to-parameter ratio = 14.7
Structure: IIa
- Single-crystal synchrotron study
- T = 100 K
- Mean
(C-C) = 0.002 Å
- R factor = 0.099
- wR factor = 0.240
- Data-to-parameter ratio = 13.6
checkCIF/PLATON results
No syntax errors found
Datablock: Ia
Alert level C
PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.3 Note
PLAT906_ALERT_3_C Large K value in the Analysis of Variance ...... 2.452 Check
PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.600 18 Report
PLAT978_ALERT_2_C Number C-C Bonds with Positive Residual Density 0 Note
Alert level G
ABSMU01_ALERT_1_G Calculation of _exptl_absorpt_correction_mu
not performed for this radiation type.
PLAT343_ALERT_2_G Unusual sp3 Angle Range in Main Residue for C9A Check
PLAT793_ALERT_4_G The Model has Chirality at C5A (Centro SPGR) S Verify
PLAT793_ALERT_4_G The Model has Chirality at C6 (Centro SPGR) R Verify
PLAT793_ALERT_4_G The Model has Chirality at C7 (Centro SPGR) S Verify
PLAT793_ALERT_4_G The Model has Chirality at C9A (Centro SPGR) R Verify
PLAT793_ALERT_4_G The Model has Chirality at C9B (Centro SPGR) R Verify
PLAT910_ALERT_3_G Missing # of FCF Reflection(s) Below Theta(Min) 3 Note
PLAT912_ALERT_4_G Missing # of FCF Reflections Above STh/L= 0.600 84 Note
0 ALERT level A = Most likely a serious problem - resolve or explain
0 ALERT level B = A potentially serious problem, consider carefully
4 ALERT level C = Check. Ensure it is not caused by an omission or oversight
9 ALERT level G = General information/check it is not something unexpected
1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
3 ALERT type 2 Indicator that the structure model may be wrong or deficient
3 ALERT type 3 Indicator that the structure quality may be low
6 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
Datablock: IIa
Alert level B
PLAT029_ALERT_3_B _diffrn_measured_fraction_theta_full value Low . 0.941 Note
Alert level C
PLAT230_ALERT_2_C Hirshfeld Test Diff for C5 -- C5A .. 6.0 s.u.
PLAT230_ALERT_2_C Hirshfeld Test Diff for C7 -- C8 .. 6.2 s.u.
PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.2 Note
PLAT906_ALERT_3_C Large K value in the Analysis of Variance ...... 20.628 Check
PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.600 116 Report
PLAT978_ALERT_2_C Number C-C Bonds with Positive Residual Density 0 Note
Alert level G
ABSMU01_ALERT_1_G Calculation of _exptl_absorpt_correction_mu
not performed for this radiation type.
PLAT007_ALERT_5_G Number of Unrefined Donor-H Atoms .............. 1 Report
PLAT154_ALERT_1_G The s.u.'s on the Cell Angles are Equal ..(Note) 0.03 Degree
PLAT180_ALERT_4_G Check Cell Rounding: # of Values Ending with 0 = 3 Note
PLAT343_ALERT_2_G Unusual sp3 Angle Range in Main Residue for C9A Check
PLAT432_ALERT_2_G Short Inter X...Y Contact C11 .. C11 .. 3.19 Ang.
PLAT793_ALERT_4_G The Model has Chirality at C5A (Centro SPGR) S Verify
PLAT793_ALERT_4_G The Model has Chirality at C6 (Centro SPGR) S Verify
PLAT793_ALERT_4_G The Model has Chirality at C7 (Centro SPGR) S Verify
PLAT793_ALERT_4_G The Model has Chirality at C9A (Centro SPGR) R Verify
PLAT793_ALERT_4_G The Model has Chirality at C9B (Centro SPGR) R Verify
PLAT912_ALERT_4_G Missing # of FCF Reflections Above STh/L= 0.600 144 Note
0 ALERT level A = Most likely a serious problem - resolve or explain
1 ALERT level B = A potentially serious problem, consider carefully
6 ALERT level C = Check. Ensure it is not caused by an omission or oversight
12 ALERT level G = General information/check it is not something unexpected
2 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
6 ALERT type 2 Indicator that the structure model may be wrong or deficient
3 ALERT type 3 Indicator that the structure quality may be low
7 ALERT type 4 Improvement, methodology, query or suggestion
1 ALERT type 5 Informative message, check
For both compounds, data collection: Automar (MarXperts, 2015); cell refinement: iMOSFLM (Battye et al., 2011); data reduction: iMOSFLM (Battye et al., 2011); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
(Ia) 5a(
RS),6(
SR),7(
RS),9a(
SR),9b(
SR)-5-Oxo-1,2,3,5,5a,6,7,9b-octahydro-7,9a-epoxypyrrolo[2,1-
a]isoindole-6-carboxylic acid
top
Crystal data top
C12H13NO4 | Dx = 1.415 Mg m−3 |
Mr = 235.23 | Melting point = 413–414 K |
Monoclinic, P21/c | Synchrotron radiation, λ = 0.96990 Å |
a = 11.045 (2) Å | Cell parameters from 600 reflections |
b = 9.2023 (18) Å | θ = 4.5–38.0° |
c = 11.062 (2) Å | µ = 0.23 mm−1 |
β = 100.91 (3)° | T = 100 K |
V = 1104.1 (4) Å3 | Prism, colourless |
Z = 4 | 0.20 × 0.15 × 0.15 mm |
F(000) = 496 | |
Data collection top
MAR CCD diffractometer | 1864 reflections with I > 2σ(I) |
φ scan | Rint = 0.085 |
Absorption correction: multi-scan (SCALA; Evans, 2006) | θmax = 38.5°, θmin = 4.5° |
Tmin = 0.950, Tmax = 0.960 | h = −13→14 |
12183 measured reflections | k = −11→10 |
2329 independent reflections | l = −13→13 |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.072 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.189 | w = 1/[σ2(Fo2) + (0.08P)2 + 1.P] where P = (Fo2 + 2Fc2)/3 |
S = 1.02 | (Δ/σ)max < 0.001 |
2329 reflections | Δρmax = 0.43 e Å−3 |
158 parameters | Δρmin = −0.43 e Å−3 |
0 restraints | Extinction correction: SHELXL-2014/7 (Sheldrick, 2015), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: difference Fourier map | Extinction coefficient: 0.104 (9) |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C1 | 0.8345 (2) | 0.9330 (3) | 0.5467 (2) | 0.0330 (6) | |
H1A | 0.8888 | 0.8929 | 0.4933 | 0.040* | |
H1B | 0.8859 | 0.9780 | 0.6202 | 0.040* | |
C2 | 0.7415 (2) | 1.0430 (3) | 0.4762 (2) | 0.0349 (6) | |
H2A | 0.7799 | 1.1002 | 0.4177 | 0.042* | |
H2B | 0.7123 | 1.1106 | 0.5341 | 0.042* | |
C3 | 0.6333 (2) | 0.9507 (3) | 0.4064 (2) | 0.0312 (6) | |
H3A | 0.5531 | 0.9989 | 0.4059 | 0.037* | |
H3B | 0.6426 | 0.9320 | 0.3205 | 0.037* | |
N4 | 0.64418 (17) | 0.8166 (2) | 0.47832 (17) | 0.0272 (5) | |
C5 | 0.60154 (19) | 0.6839 (2) | 0.4418 (2) | 0.0253 (5) | |
O5 | 0.52224 (14) | 0.65677 (18) | 0.34888 (14) | 0.0280 (5) | |
C5A | 0.66529 (19) | 0.5736 (2) | 0.53586 (19) | 0.0236 (5) | |
H5A | 0.6166 | 0.5553 | 0.6019 | 0.028* | |
C6 | 0.7153 (2) | 0.4306 (2) | 0.4908 (2) | 0.0254 (5) | |
H6 | 0.7007 | 0.3500 | 0.5470 | 0.030* | |
C7 | 0.8561 (2) | 0.4655 (3) | 0.5143 (2) | 0.0296 (6) | |
H7 | 0.9050 | 0.4068 | 0.4645 | 0.035* | |
C8 | 0.9021 (2) | 0.4591 (3) | 0.6528 (2) | 0.0330 (6) | |
H8 | 0.9504 | 0.3847 | 0.6980 | 0.040* | |
C9 | 0.8604 (2) | 0.5799 (3) | 0.6976 (2) | 0.0302 (6) | |
H9 | 0.8737 | 0.6103 | 0.7812 | 0.036* | |
C9A | 0.7874 (2) | 0.6583 (2) | 0.5868 (2) | 0.0251 (5) | |
C9B | 0.7500 (2) | 0.8164 (3) | 0.5827 (2) | 0.0291 (6) | |
H9B | 0.7224 | 0.8442 | 0.6606 | 0.035* | |
O10 | 0.85603 (14) | 0.62038 (18) | 0.49215 (14) | 0.0276 (4) | |
C11 | 0.6649 (2) | 0.3852 (2) | 0.3585 (2) | 0.0251 (5) | |
O11 | 0.71540 (16) | 0.4123 (2) | 0.27256 (16) | 0.0374 (5) | |
O12 | 0.56401 (14) | 0.30469 (18) | 0.35042 (15) | 0.0265 (4) | |
H12 | 0.539 (3) | 0.275 (3) | 0.272 (3) | 0.040* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0350 (13) | 0.0293 (13) | 0.0289 (12) | −0.0063 (9) | −0.0086 (10) | −0.0015 (9) |
C2 | 0.0433 (15) | 0.0252 (13) | 0.0318 (14) | −0.0031 (10) | −0.0039 (11) | 0.0009 (9) |
C3 | 0.0333 (13) | 0.0261 (13) | 0.0304 (13) | 0.0025 (9) | −0.0033 (10) | 0.0043 (9) |
N4 | 0.0257 (10) | 0.0236 (11) | 0.0278 (10) | 0.0004 (7) | −0.0064 (8) | 0.0017 (7) |
C5 | 0.0192 (10) | 0.0290 (12) | 0.0246 (11) | −0.0003 (8) | −0.0036 (8) | 0.0016 (8) |
O5 | 0.0233 (8) | 0.0293 (9) | 0.0259 (9) | −0.0010 (6) | −0.0098 (6) | 0.0025 (6) |
C5A | 0.0190 (10) | 0.0270 (12) | 0.0214 (11) | −0.0001 (8) | −0.0052 (8) | 0.0018 (8) |
C6 | 0.0229 (11) | 0.0254 (12) | 0.0235 (11) | −0.0011 (8) | −0.0066 (8) | 0.0011 (8) |
C7 | 0.0215 (11) | 0.0309 (13) | 0.0314 (13) | 0.0017 (9) | −0.0075 (9) | −0.0039 (9) |
C8 | 0.0252 (11) | 0.0324 (13) | 0.0334 (14) | 0.0030 (9) | −0.0148 (9) | 0.0008 (9) |
C9 | 0.0268 (12) | 0.0341 (14) | 0.0237 (12) | −0.0021 (9) | −0.0102 (9) | 0.0011 (9) |
C9A | 0.0231 (11) | 0.0260 (12) | 0.0226 (11) | −0.0001 (8) | −0.0045 (8) | −0.0008 (8) |
C9B | 0.0269 (12) | 0.0323 (14) | 0.0236 (11) | 0.0001 (9) | −0.0066 (9) | −0.0003 (9) |
O10 | 0.0222 (8) | 0.0303 (9) | 0.0276 (9) | −0.0023 (6) | −0.0023 (6) | −0.0015 (7) |
C11 | 0.0221 (11) | 0.0246 (12) | 0.0254 (12) | 0.0003 (8) | −0.0036 (8) | 0.0000 (8) |
O11 | 0.0352 (10) | 0.0471 (12) | 0.0276 (10) | −0.0085 (8) | 0.0004 (7) | −0.0016 (7) |
O12 | 0.0205 (8) | 0.0301 (9) | 0.0251 (9) | −0.0027 (6) | −0.0053 (6) | −0.0030 (6) |
Geometric parameters (Å, º) top
C1—C9B | 1.524 (4) | C6—C11 | 1.522 (3) |
C1—C2 | 1.544 (3) | C6—C7 | 1.561 (3) |
C1—H1A | 0.9900 | C6—H6 | 1.0000 |
C1—H1B | 0.9900 | C7—O10 | 1.446 (3) |
C2—C3 | 1.548 (3) | C7—C8 | 1.522 (3) |
C2—H2A | 0.9900 | C7—H7 | 1.0000 |
C2—H2B | 0.9900 | C8—C9 | 1.334 (4) |
C3—N4 | 1.461 (3) | C8—H8 | 0.9500 |
C3—H3A | 0.9900 | C9—C9A | 1.516 (3) |
C3—H3B | 0.9900 | C9—H9 | 0.9500 |
N4—C5 | 1.343 (3) | C9A—O10 | 1.447 (3) |
N4—C9B | 1.480 (3) | C9A—C9B | 1.511 (3) |
C5—O5 | 1.243 (3) | C9B—H9B | 1.0000 |
C5—C5A | 1.527 (3) | C11—O11 | 1.216 (3) |
C5A—C6 | 1.546 (3) | C11—O12 | 1.327 (3) |
C5A—C9A | 1.568 (3) | O12—H12 | 0.90 (3) |
C5A—H5A | 1.0000 | | |
| | | |
C9B—C1—C2 | 102.2 (2) | C11—C6—H6 | 108.8 |
C9B—C1—H1A | 111.3 | C5A—C6—H6 | 108.8 |
C2—C1—H1A | 111.3 | C7—C6—H6 | 108.8 |
C9B—C1—H1B | 111.3 | O10—C7—C8 | 101.44 (18) |
C2—C1—H1B | 111.3 | O10—C7—C6 | 101.91 (17) |
H1A—C1—H1B | 109.2 | C8—C7—C6 | 107.0 (2) |
C1—C2—C3 | 105.63 (19) | O10—C7—H7 | 115.0 |
C1—C2—H2A | 110.6 | C8—C7—H7 | 115.0 |
C3—C2—H2A | 110.6 | C6—C7—H7 | 115.0 |
C1—C2—H2B | 110.6 | C9—C8—C7 | 105.6 (2) |
C3—C2—H2B | 110.6 | C9—C8—H8 | 127.2 |
H2A—C2—H2B | 108.7 | C7—C8—H8 | 127.2 |
N4—C3—C2 | 102.45 (18) | C8—C9—C9A | 105.3 (2) |
N4—C3—H3A | 111.3 | C8—C9—H9 | 127.3 |
C2—C3—H3A | 111.3 | C9A—C9—H9 | 127.3 |
N4—C3—H3B | 111.3 | O10—C9A—C9B | 112.83 (19) |
C2—C3—H3B | 111.3 | O10—C9A—C9 | 101.49 (18) |
H3A—C3—H3B | 109.2 | C9B—C9A—C9 | 125.67 (19) |
C5—N4—C3 | 128.07 (19) | O10—C9A—C5A | 98.78 (16) |
C5—N4—C9B | 114.43 (18) | C9B—C9A—C5A | 104.85 (17) |
C3—N4—C9B | 113.42 (18) | C9—C9A—C5A | 110.12 (18) |
O5—C5—N4 | 125.7 (2) | N4—C9B—C9A | 101.29 (17) |
O5—C5—C5A | 126.3 (2) | N4—C9B—C1 | 103.16 (18) |
N4—C5—C5A | 108.04 (17) | C9A—C9B—C1 | 120.6 (2) |
C5—C5A—C6 | 119.56 (18) | N4—C9B—H9B | 110.3 |
C5—C5A—C9A | 99.73 (17) | C9A—C9B—H9B | 110.3 |
C6—C5A—C9A | 101.74 (17) | C1—C9B—H9B | 110.3 |
C5—C5A—H5A | 111.5 | C7—O10—C9A | 95.65 (17) |
C6—C5A—H5A | 111.5 | O11—C11—O12 | 124.4 (2) |
C9A—C5A—H5A | 111.5 | O11—C11—C6 | 123.9 (2) |
C11—C6—C5A | 117.10 (17) | O12—C11—C6 | 111.56 (19) |
C11—C6—C7 | 112.8 (2) | C11—O12—H12 | 109.4 (19) |
C5A—C6—C7 | 100.16 (17) | | |
| | | |
C9B—C1—C2—C3 | −35.5 (3) | C6—C5A—C9A—O10 | 40.32 (19) |
C1—C2—C3—N4 | 23.1 (3) | C5—C5A—C9A—C9B | 33.7 (2) |
C2—C3—N4—C5 | −157.3 (2) | C6—C5A—C9A—C9B | 156.88 (18) |
C2—C3—N4—C9B | −1.6 (3) | C5—C5A—C9A—C9 | 171.42 (19) |
C3—N4—C5—O5 | −16.7 (4) | C6—C5A—C9A—C9 | −65.4 (2) |
C9B—N4—C5—O5 | −172.2 (2) | C5—N4—C9B—C9A | 13.2 (3) |
C3—N4—C5—C5A | 164.6 (2) | C3—N4—C9B—C9A | −146.0 (2) |
C9B—N4—C5—C5A | 9.0 (3) | C5—N4—C9B—C1 | 138.6 (2) |
O5—C5—C5A—C6 | 45.6 (3) | C3—N4—C9B—C1 | −20.6 (3) |
N4—C5—C5A—C6 | −135.7 (2) | O10—C9A—C9B—N4 | 77.5 (2) |
O5—C5—C5A—C9A | 155.1 (2) | C9—C9A—C9B—N4 | −157.9 (2) |
N4—C5—C5A—C9A | −26.1 (2) | C5A—C9A—C9B—N4 | −29.0 (2) |
C5—C5A—C6—C11 | −18.4 (3) | O10—C9A—C9B—C1 | −35.3 (3) |
C9A—C5A—C6—C11 | −126.8 (2) | C9—C9A—C9B—C1 | 89.3 (3) |
C5—C5A—C6—C7 | 103.9 (2) | C5A—C9A—C9B—C1 | −141.8 (2) |
C9A—C5A—C6—C7 | −4.5 (2) | C2—C1—C9B—N4 | 33.3 (2) |
C11—C6—C7—O10 | 92.5 (2) | C2—C1—C9B—C9A | 145.2 (2) |
C5A—C6—C7—O10 | −32.8 (2) | C8—C7—O10—C9A | −50.66 (19) |
C11—C6—C7—C8 | −161.48 (19) | C6—C7—O10—C9A | 59.66 (18) |
C5A—C6—C7—C8 | 73.2 (2) | C9B—C9A—O10—C7 | −171.63 (16) |
O10—C7—C8—C9 | 32.0 (3) | C9—C9A—O10—C7 | 51.38 (18) |
C6—C7—C8—C9 | −74.4 (2) | C5A—C9A—O10—C7 | −61.36 (16) |
C7—C8—C9—C9A | 0.9 (3) | C5A—C6—C11—O11 | 95.3 (3) |
C8—C9—C9A—O10 | −33.6 (2) | C7—C6—C11—O11 | −20.2 (3) |
C8—C9—C9A—C9B | −162.9 (2) | C5A—C6—C11—O12 | −88.8 (2) |
C8—C9—C9A—C5A | 70.3 (3) | C7—C6—C11—O12 | 155.70 (19) |
C5—C5A—C9A—O10 | −82.84 (18) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O12—H12···O5i | 0.90 (3) | 1.75 (3) | 2.613 (2) | 157 (3) |
C5A—H5A···O12ii | 1.00 | 2.51 | 3.234 (3) | 129 |
Symmetry codes: (i) −x+1, y−1/2, −z+1/2; (ii) −x+1, −y+1, −z+1. |
(IIa) 5a(
RS),6(
RS),7(
RS),9a(
SR),9b(
SR)-5-Oxo-1,2,3,5,5a,6,7,9b-octahydro-7,9a-epoxypyrrolo[2,1-
a]isoindole-6-carboxylic acid
top
Crystal data top
C12H13NO4 | F(000) = 248 |
Mr = 235.23 | Dx = 1.426 Mg m−3 |
Triclinic, P1 | Melting point = 414–416 K |
a = 8.4700 (17) Å | Synchrotron radiation, λ = 0.96990 Å |
b = 8.5100 (17) Å | Cell parameters from 500 reflections |
c = 8.5900 (17) Å | θ = 3.6–36.0° |
α = 94.04 (3)° | µ = 0.23 mm−1 |
β = 111.12 (3)° | T = 100 K |
γ = 105.17 (3)° | Prism, colourless |
V = 548.0 (2) Å3 | 0.15 × 0.10 × 0.10 mm |
Z = 2 | |
Data collection top
MAR CCD diffractometer | 1402 reflections with I > 2σ(I) |
φ scan | Rint = 0.061 |
Absorption correction: multi-scan (SCALA; Evans, 2006) | θmax = 38.1°, θmin = 3.4° |
Tmin = 0.960, Tmax = 0.969 | h = −10→10 |
7090 measured reflections | k = −10→10 |
2104 independent reflections | l = −10→10 |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.099 | H-atom parameters constrained |
wR(F2) = 0.240 | w = 1/[σ2(Fo2) + (0.06P)2] where P = (Fo2 + 2Fc2)/3 |
S = 0.93 | (Δ/σ)max < 0.001 |
2104 reflections | Δρmax = 0.45 e Å−3 |
155 parameters | Δρmin = −0.36 e Å−3 |
0 restraints | Extinction correction: SHELXL-2014/7 (Sheldrick, 2015), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: difference Fourier map | Extinction coefficient: 0.138 (11) |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C1 | 0.1779 (3) | 0.0068 (2) | 0.2264 (2) | 0.0322 (5) | |
H1A | 0.0733 | −0.0331 | 0.1171 | 0.039* | |
H1B | 0.2531 | −0.0668 | 0.2374 | 0.039* | |
C2 | 0.1215 (3) | 0.0169 (2) | 0.3765 (2) | 0.0324 (5) | |
H2A | 0.0900 | −0.0932 | 0.4081 | 0.039* | |
H2B | 0.0181 | 0.0592 | 0.3486 | 0.039* | |
C3 | 0.2874 (2) | 0.1392 (2) | 0.5222 (2) | 0.0288 (5) | |
H3A | 0.2529 | 0.2089 | 0.5934 | 0.035* | |
H3B | 0.3628 | 0.0797 | 0.5949 | 0.035* | |
N4 | 0.37879 (19) | 0.23864 (17) | 0.42848 (16) | 0.0261 (4) | |
C5 | 0.5531 (2) | 0.3199 (2) | 0.4832 (2) | 0.0250 (4) | |
O5 | 0.65982 (17) | 0.35299 (15) | 0.63512 (13) | 0.0299 (3) | |
C5A | 0.5950 (2) | 0.3619 (2) | 0.3297 (2) | 0.0233 (4) | |
H5A | 0.5949 | 0.4769 | 0.3127 | 0.028* | |
C6 | 0.7574 (2) | 0.32415 (19) | 0.3142 (2) | 0.0245 (4) | |
H6 | 0.8150 | 0.2754 | 0.4140 | 0.029* | |
C7 | 0.6593 (3) | 0.1818 (2) | 0.1503 (2) | 0.0276 (5) | |
H7 | 0.7338 | 0.1138 | 0.1333 | 0.033* | |
C8 | 0.5722 (2) | 0.2548 (2) | −0.0027 (2) | 0.0264 (5) | |
H8 | 0.6108 | 0.2775 | −0.0921 | 0.032* | |
C9 | 0.4292 (3) | 0.2805 (2) | 0.0152 (2) | 0.0284 (5) | |
H9 | 0.3431 | 0.3223 | −0.0598 | 0.034* | |
C9A | 0.4358 (2) | 0.2276 (2) | 0.1826 (2) | 0.0256 (5) | |
C9B | 0.2840 (2) | 0.1875 (2) | 0.24142 (19) | 0.0267 (5) | |
H9B | 0.2022 | 0.2541 | 0.1950 | 0.032* | |
O10 | 0.51146 (16) | 0.09341 (13) | 0.18544 (14) | 0.0258 (3) | |
C11 | 0.8967 (2) | 0.4657 (2) | 0.2990 (2) | 0.0259 (5) | |
O11 | 0.88416 (17) | 0.60281 (15) | 0.27854 (15) | 0.0338 (4) | |
O12 | 1.04071 (16) | 0.42233 (14) | 0.31124 (15) | 0.0312 (4) | |
H12 | 1.1355 | 0.5093 | 0.3163 | 0.047* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0352 (10) | 0.0244 (9) | 0.0294 (8) | −0.0016 (8) | 0.0132 (7) | −0.0032 (7) |
C2 | 0.0364 (10) | 0.0254 (9) | 0.0311 (8) | −0.0003 (8) | 0.0158 (7) | 0.0030 (7) |
C3 | 0.0365 (9) | 0.0234 (9) | 0.0290 (8) | 0.0035 (8) | 0.0201 (6) | 0.0019 (7) |
N4 | 0.0308 (8) | 0.0214 (7) | 0.0246 (6) | 0.0012 (6) | 0.0152 (5) | −0.0014 (5) |
C5 | 0.0316 (9) | 0.0159 (7) | 0.0263 (8) | 0.0045 (7) | 0.0131 (6) | −0.0028 (6) |
O5 | 0.0364 (7) | 0.0281 (6) | 0.0205 (5) | 0.0017 (5) | 0.0130 (4) | −0.0033 (5) |
C5A | 0.0284 (9) | 0.0177 (8) | 0.0227 (7) | 0.0022 (7) | 0.0131 (6) | −0.0005 (6) |
C6 | 0.0355 (9) | 0.0164 (8) | 0.0232 (7) | 0.0043 (7) | 0.0165 (6) | 0.0005 (6) |
C7 | 0.0335 (9) | 0.0192 (8) | 0.0277 (8) | −0.0004 (7) | 0.0169 (6) | −0.0048 (6) |
C8 | 0.0373 (10) | 0.0199 (8) | 0.0209 (7) | 0.0025 (7) | 0.0158 (6) | −0.0026 (6) |
C9 | 0.0368 (10) | 0.0211 (8) | 0.0229 (8) | 0.0029 (8) | 0.0118 (7) | −0.0001 (6) |
C9A | 0.0344 (9) | 0.0168 (8) | 0.0239 (7) | 0.0043 (7) | 0.0128 (6) | 0.0000 (6) |
C9B | 0.0327 (9) | 0.0214 (8) | 0.0240 (8) | 0.0032 (7) | 0.0134 (6) | −0.0021 (6) |
O10 | 0.0337 (6) | 0.0164 (5) | 0.0277 (5) | 0.0033 (5) | 0.0165 (4) | −0.0009 (4) |
C11 | 0.0316 (9) | 0.0227 (9) | 0.0204 (7) | 0.0024 (7) | 0.0126 (6) | −0.0045 (6) |
O11 | 0.0375 (7) | 0.0228 (6) | 0.0390 (6) | 0.0042 (6) | 0.0170 (5) | 0.0031 (5) |
O12 | 0.0309 (7) | 0.0232 (6) | 0.0403 (6) | 0.0040 (5) | 0.0189 (5) | 0.0015 (5) |
Geometric parameters (Å, º) top
C1—C2 | 1.532 (3) | C6—C11 | 1.500 (3) |
C1—C9B | 1.534 (3) | C6—C7 | 1.590 (2) |
C1—H1A | 0.9900 | C6—H6 | 1.0000 |
C1—H1B | 0.9900 | C7—O10 | 1.427 (2) |
C2—C3 | 1.552 (2) | C7—C8 | 1.521 (3) |
C2—H2A | 0.9900 | C7—H7 | 1.0000 |
C2—H2B | 0.9900 | C8—C9 | 1.344 (3) |
C3—N4 | 1.472 (2) | C8—H8 | 0.9500 |
C3—H3A | 0.9900 | C9—C9A | 1.522 (2) |
C3—H3B | 0.9900 | C9—H9 | 0.9500 |
N4—C5 | 1.341 (2) | C9A—O10 | 1.446 (2) |
N4—C9B | 1.485 (2) | C9A—C9B | 1.513 (3) |
C5—O5 | 1.250 (2) | C9B—H9B | 1.0000 |
C5—C5A | 1.526 (3) | C11—O11 | 1.218 (2) |
C5A—C6 | 1.540 (3) | C11—O12 | 1.336 (2) |
C5A—C9A | 1.576 (2) | O12—H12 | 0.9239 |
C5A—H5A | 1.0000 | | |
| | | |
C2—C1—C9B | 102.15 (14) | C11—C6—H6 | 108.7 |
C2—C1—H1A | 111.3 | C5A—C6—H6 | 108.7 |
C9B—C1—H1A | 111.3 | C7—C6—H6 | 108.7 |
C2—C1—H1B | 111.3 | O10—C7—C8 | 102.71 (15) |
C9B—C1—H1B | 111.3 | O10—C7—C6 | 99.48 (13) |
H1A—C1—H1B | 109.2 | C8—C7—C6 | 109.15 (14) |
C1—C2—C3 | 104.39 (16) | O10—C7—H7 | 114.6 |
C1—C2—H2A | 110.9 | C8—C7—H7 | 114.6 |
C3—C2—H2A | 110.9 | C6—C7—H7 | 114.6 |
C1—C2—H2B | 110.9 | C9—C8—C7 | 105.52 (17) |
C3—C2—H2B | 110.9 | C9—C8—H8 | 127.2 |
H2A—C2—H2B | 108.9 | C7—C8—H8 | 127.2 |
N4—C3—C2 | 102.16 (13) | C8—C9—C9A | 104.59 (17) |
N4—C3—H3A | 111.3 | C8—C9—H9 | 127.7 |
C2—C3—H3A | 111.3 | C9A—C9—H9 | 127.7 |
N4—C3—H3B | 111.3 | O10—C9A—C9B | 111.77 (14) |
C2—C3—H3B | 111.3 | O10—C9A—C9 | 102.12 (14) |
H3A—C3—H3B | 109.2 | C9B—C9A—C9 | 126.44 (16) |
C5—N4—C3 | 127.10 (15) | O10—C9A—C5A | 100.18 (14) |
C5—N4—C9B | 115.10 (15) | C9B—C9A—C5A | 105.83 (13) |
C3—N4—C9B | 113.07 (13) | C9—C9A—C5A | 107.50 (14) |
O5—C5—N4 | 124.50 (18) | N4—C9B—C9A | 102.11 (13) |
O5—C5—C5A | 127.21 (17) | N4—C9B—C1 | 101.06 (14) |
N4—C5—C5A | 108.28 (14) | C9A—C9B—C1 | 120.38 (16) |
C5—C5A—C6 | 117.75 (15) | N4—C9B—H9B | 110.7 |
C5—C5A—C9A | 101.00 (14) | C9A—C9B—H9B | 110.7 |
C6—C5A—C9A | 101.86 (13) | C1—C9B—H9B | 110.7 |
C5—C5A—H5A | 111.7 | C7—O10—C9A | 96.02 (13) |
C6—C5A—H5A | 111.7 | O11—C11—O12 | 123.30 (17) |
C9A—C5A—H5A | 111.7 | O11—C11—C6 | 125.93 (18) |
C11—C6—C5A | 117.00 (15) | O12—C11—C6 | 110.77 (15) |
C11—C6—C7 | 113.55 (15) | C11—O12—H12 | 113.8 |
C5A—C6—C7 | 99.72 (13) | | |
| | | |
C9B—C1—C2—C3 | −40.2 (2) | C6—C5A—C9A—O10 | 32.99 (16) |
C1—C2—C3—N4 | 24.99 (19) | C5—C5A—C9A—C9B | 27.56 (18) |
C2—C3—N4—C5 | −154.32 (18) | C6—C5A—C9A—C9B | 149.26 (14) |
C2—C3—N4—C9B | −0.1 (2) | C5—C5A—C9A—C9 | 165.01 (15) |
C3—N4—C5—O5 | −16.0 (3) | C6—C5A—C9A—C9 | −73.29 (18) |
C9B—N4—C5—O5 | −169.80 (16) | C5—N4—C9B—C9A | 8.4 (2) |
C3—N4—C5—C5A | 163.66 (15) | C3—N4—C9B—C9A | −149.09 (15) |
C9B—N4—C5—C5A | 9.9 (2) | C5—N4—C9B—C1 | 133.04 (17) |
O5—C5—C5A—C6 | 47.1 (2) | C3—N4—C9B—C1 | −24.4 (2) |
N4—C5—C5A—C6 | −132.62 (15) | O10—C9A—C9B—N4 | 85.85 (15) |
O5—C5—C5A—C9A | 156.89 (18) | C9—C9A—C9B—N4 | −148.99 (15) |
N4—C5—C5A—C9A | −22.81 (19) | C5A—C9A—C9B—N4 | −22.27 (18) |
C5—C5A—C6—C11 | −123.93 (16) | O10—C9A—C9B—C1 | −24.8 (2) |
C9A—C5A—C6—C11 | 126.75 (15) | C9—C9A—C9B—C1 | 100.3 (2) |
C5—C5A—C6—C7 | 113.23 (14) | C5A—C9A—C9B—C1 | −132.96 (15) |
C9A—C5A—C6—C7 | 3.91 (16) | C2—C1—C9B—N4 | 38.51 (18) |
C11—C6—C7—O10 | −165.65 (15) | C2—C1—C9B—C9A | 149.76 (16) |
C5A—C6—C7—O10 | −40.40 (16) | C8—C7—O10—C9A | −49.46 (13) |
C11—C6—C7—C8 | −58.5 (2) | C6—C7—O10—C9A | 62.79 (14) |
C5A—C6—C7—C8 | 66.71 (18) | C9B—C9A—O10—C7 | −171.68 (12) |
O10—C7—C8—C9 | 30.75 (16) | C9—C9A—O10—C7 | 50.59 (14) |
C6—C7—C8—C9 | −74.15 (18) | C5A—C9A—O10—C7 | −59.96 (14) |
C7—C8—C9—C9A | 1.83 (16) | C5A—C6—C11—O11 | −8.9 (2) |
C8—C9—C9A—O10 | −33.38 (16) | C7—C6—C11—O11 | 106.5 (2) |
C8—C9—C9A—C9B | −162.43 (15) | C5A—C6—C11—O12 | 171.02 (12) |
C8—C9—C9A—C5A | 71.53 (17) | C7—C6—C11—O12 | −73.58 (19) |
C5—C5A—C9A—O10 | −88.71 (15) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O12—H12···O5i | 0.92 | 1.70 | 2.607 (2) | 165 |
C9—H9···O11ii | 0.95 | 2.42 | 3.362 (3) | 172 |
Symmetry codes: (i) −x+2, −y+1, −z+1; (ii) −x+1, −y+1, −z. |