organic compounds
Supramolecular structures of three isomeric 2-chloro-N-(nitrophenyl)nicotinamides
aComplexo Tecnológico de Medicamentos Farmanguinhos, Av. Comandante Guaranys 447, Jacarepaguá, Rio de Janeiro, RJ, Brazil, bInstituto de Química, Departamento de Química Inorgânica, Universidade Federal do Rio de Janeiro, CP 68563, 21945-970 Rio de Janeiro, RJ, Brazil, cDepartment of Chemistry, University of Aberdeen, Meston Walk, Old Aberdeen AB24 3UE, Scotland, and dSchool of Chemistry, University of St Andrews, Fife KY16 9ST, Scotland
*Correspondence e-mail: cg@st-andrews.ac.uk
Molecules of 2-chloro-N-(2-nitrophenyl)nicotinamide, C12H8ClN3O3, are linked by two C—H⋯O hydrogen bonds into a chain of edge-fused (14) and (24) rings. In 2-chloro-N-(3-nitrophenyl)nicotinamide monohydrate, C12H8ClN3O3·H2O, the molecules are linked by a combination of N—H⋯O, O—H⋯O and O—H⋯N hydrogen bonds into a chain of edge-fused rings containing two distinct types of (16) ring. In 2-chloro-N-(4-nitrophenyl)nicotinamide, C12H8ClN3O3, which crystallizes with Z′ = 2 in P21/n, the molecules are linked by two N—H⋯N hydrogen bonds into simple (12) chains.
Comment
We report here the molecular and supramolecular structures of three isomeric 2-chloro-N-(nitrophenyl)nicotinamides (Figs. 1–3). Of these isomers, the 3-nitrophenyl isomer, (II), crystallizes from acetone as a monohydrate, whereas the 2-nitrophenyl isomer, (I), crystallizes from the same solvent in the unsolvated form. The 4-nitrophenyl isomer, (III), crystallizes from ethanol with Z′ = 2 (Fig. 3).
In compounds (I) and (II), and in each of the independent molecules of (III), the central amide spacer unit is essentially planar, as demonstrated by the C—C—N—C torsion angles (Tables 1, 3 and 5). However, the torsion angles describing the conformations of the two rings relative to the spacer unit show some variations, particularly for the heteroaryl rings. The nitroaryl rings do not deviate significantly from the plane of the amide spacer unit, and in each molecule there is a short intramolecular C—H⋯O contact involving atom C26 in the aryl ring [atom C46 in molecule 2 of compound (III)] and the amide O atom (Tables 2, 4 and 6); this interaction may have some influence on the conformation. The planes of the nitro groups are all close to the planes of the adjacent aryl rings. The two independent molecules in (III) adopt very similar conformations so that for the selected the two molecules are nearly enantiomeric (Table 5 and Fig. 3).
Within the spacer units, the backbone C—C—N angles are consistently significantly less than 120°, while the C—N—C angles are significantly greater than 120°. There is no evidence from the bond length in the nitroaniline fragments in compounds (I) and (III) of any bond fixation, such as is typically found in simple 2-nitro- and 4-nitroanilines. Thus, polarization of types (Ia) and (IIIa) cannot effectively compete with the normal polarization of the amide units in these compounds.
The molecules of (I) are linked into a chain of edge-fused rings by two C—H⋯O hydrogen bonds, involving both the carbonyl O and one of the nitro O atoms (Table 2). Atom C14 of the heteroaryl ring in the molecule at (x, y, z) acts as a hydrogen-bond donor to nitro atom O2 in the molecule at (−1 + x, y, z), so generating by translation a C(9) chain (Bernstein et al., 1995) running parallel to the [100] direction. At the same time, aryl atom C25 in the molecule at (x, y, z) acts as a donor to carbonyl atom O1 in the molecule at (−x, 1 − y, 1 − z), so forming a centrosymmetric (14) ring centred at (0, , ). The combination of these two motifs then generates a chain of centrosymmetric edge-fused rings along [100], with (14) rings centred at (n, , ) (n = zero or integer) and (24) rings centred at (n + , , ) (n = zero or integer) (Fig. 4). Two chains of this type pass through each along the lines (x, 0, 0) and (x, , ), but there are no direction-specific interactions between adjacent chains.
The independent components in (II) are linked by a combination of O—H⋯O, O—H⋯N and N—H⋯O hydrogen bonds (Table 4) into a chain of edge-fused rings. Water atom O41 acts as a hydrogen-bond donor, via H41, to carbonyl atom O1 within the In addition, amine atom N21 at (x, y, z) acts as a hydrogen-bond donor to water atom O4 at (x, −1 + y, z), so generating by translation a (6) chain running parallel to the [010] direction, in which O—H⋯O hydrogen bonds alternate with N—H⋯O hydrogen bonds (Fig. 5). Two chains of this type, antiparallel to one another, pass through each and these are linked by the O—H⋯N hydrogen bonds. Water atom O41 at (x, y, z) also acts as a hydrogen-bond donor, this time via H42, to ring atom N11 at (1 − x, 1 − y, −z), so generating a centrosymmetric (16) ring, centred at (, , 0) (Fig. 5). The combination of these two motifs then generates a chain of centrosymmetric edge-fused rings along the line (, y, 0), in which (16) rings containing O—H⋯O and O—H⋯N hydrogen bonds and centred at (, n + , 0) (n = zero or integer) alternate with (16) rings containing N—H⋯O and O—H⋯N hydrogen bonds and centred at (, n, 0) (n = zero or integer) (Fig. 5).
The hydrogen-bonded chains in compound (II) are linked by three distinct aromatic π–π stacking interactions, all of them centrosymmetric but some of them fairly weak, into a continuous three-dimensional array. The heteroaryl ring in the molecule at (x, y, z) is parallel to the corresponding ring in the molecule at (−x, 1 − y, −z), which itself forms part of the hydrogen-bonded chain along (−, y, 0); the interplanar spacing is 3.546 (2) Å, with a ring-centroid separation of 3.795 (2) Å, corresponding to a ring offset of 1.352 (2) Å. This interaction thus links the [010] chains into (001) sheets. In a similar fashion, the aryl rings of the molecules at (x, y, z) and (1 − x, −y, 1 − z), where the latter forms part of the hydrogen-bonded chain along (, y, 1), are also parallel, with an interplanar spacing of 3.707 (2) Å, a ring-centroid separation of 3.917 (2) Å and a ring offset of 1.264 (2) Å. Finally, the aryl rings of the molecules at (x, y, z) and (−x, −y, 1 − z), which forms part of the hydrogen-bonded chain along (−, y, 1), are also parallel, with an interplanar spacing of 3.384 (2) Å, a ring-centroid separation of 3.793 (2) Å and a ring offset of 1.715 (2) Å. These latter interactions connect the (001) sheets, so linking all of the hydrogen-bonded chains into a continuous framework.
The two independent molecules in (III) are linked into simple chains by two N—H⋯N hydrogen bonds (Table 6). Amide atom N21 acts as a hydrogen-bond donor to ring atom N31 within the similarly, amide atom N41 at (x, y, z) acts as a donor to ring atom N11 at (−1 + x, y, z), so generating by translation a (12) chain running parallel to the [100] direction (Fig. 6). There are number of short C—H⋯O contacts within this chain (Table 6), although it is doubtful if any of them could be regarded as a hydrogen bond; it is likely that these contacts are simply adventitious consequences of the N—H⋯N hydrogen bonds. Two (12) chains, antiparallel to one another, pass through each but there are no direction-specific interactions between adjacent chains.
It is thus striking that modest changes in the geometric position of a single substituent are associated with significant changes in crystallization characteristics, in the direction-specific intermolecular interactions manifested and hence in the overall supramolecular structures; none of these changes is readily predictable.
Experimental
For the synthesis of each of compounds (I)–(III), a solution of 2-chloronicotinoyl chloride (5.68 mmol), the appropriate nitroaniline (5.78 mmol) and triethylamine (12 mmol) in anhydrous tetrahydrofuran (30 ml) was stirred at ambient temperature for 8 h; water (20 ml) and ethyl acetate (20 ml) were added, and the organic layer was separated. This was washed with a saturated aqueous Na(HCO3) solution (2 × 20 ml), dried over sodium sulfate and the solvent removed. The resulting solids were purified by on alumina, with ethyl acetate and hexane (7:3 v/v) as eluant. Compounds (I) and (II) were recrystallized from acetone [m.p. 430–432 and 428–429 K (darkens at 407 K)], while compound (III) was recrystallized from ethanol (m.p. 479–481 K).
Compound (I)
Crystal data
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Refinement
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Compound (II)
Crystal data
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Refinement
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Compound (III)
Crystal data
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Refinement
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For isomers (I) and (III), the space groups P21/c and P21/n were uniquely assigned from the Crystals of compound (II) are triclinic; P was selected and confirmed by the successful structure analysis. All H atoms were located from difference maps. H atoms bonded to C atoms were treated as riding atoms, with C—H distances of 0.95 Å and Uiso(H) values of 1.2Ueq(C). H atoms bonded to N atoms were allowed to ride at the positions located from the difference maps, with N—H distances of 0.88–0.95 Å and Uiso(H) values of 1.2Ueq(N). H atoms bonded to atom O4 in (II) were allowed to ride at the positions located from the difference maps, with O—H distances of 0.85 and 0.88 Å and individual isotropic displacement parameters.
For all compounds, data collection: COLLECT (Hooft, 1999); cell DENZO (Otwinowski & Minor, 1997) and COLLECT; data reduction: DENZO and COLLECT; structure solution: OSCAIL (McArdle, 2003) and SHELXS97 (Sheldrick, 1997); structure OSCAIL and SHELXL97 (Sheldrick, 1997); molecular graphics: PLATON (Spek, 2003); software used to prepare material for publication: SHELXL97 and PRPKAPPA (Ferguson, 1999).
Supporting information
10.1107/S0108270105003586/sk1812sup1.cif
contains datablocks global, I, II, III. DOI:Structure factors: contains datablock I. DOI: 10.1107/S0108270105003586/sk1812Isup2.hkl
Structure factors: contains datablock II. DOI: 10.1107/S0108270105003586/sk1812IIsup3.hkl
Structure factors: contains datablock III. DOI: 10.1107/S0108270105003586/sk1812IIIsup4.hkl
For the synthesis of each of compounds (I)–(III), a solution of 2-chloronicotinoyl chloride (5.68 mmol), the appropriate nitroaniline (5.78 mmol) and triethylamine (12 mmol) in anhydrous tetrahydrofuran (30 ml) was stirred at ambient temperature for 8 h; water (20 ml) and ethyl acetate (20 ml) were added, and the organic layer was separated. This was washed with saturated aqueous Na[HCO3] solution (2 × 20 ml) and dried over sodium sulfate, and then the solvent was removed. The resulting solids were purified by
on alumina, with ethyl acetate and hexane (7:3, v/v) as eluant. Compounds (I) and (II) were recrystallized from acetone [m.p. 430–432 and 428–429 K (darkens at 407 K)]; compound (III) was recrystallized from ethanol (m.p. 479–481 K).For isomers (I) and (III), the space groups P21/c and P21/n were uniquely assigned from the 1 was selected, and confirmed by the successful structure analysis. All H atoms were located from difference maps. H atoms bonded to C atoms were treated as riding atoms, with C—H distances of 0.95 Å and Uiso(H) values of 1.2Ueq(C). H atoms bonded to N atoms were allowed to ride at the positions located from the difference maps, with N—H distances of 0.88–0.95 Å and Uiso(H) values of 1.2Ueq(N). H atoms bonded to atom O4 in (II) were allowed to ride at the positions located from the difference maps, with O—H distances of 0.85 and 0.88 Å and individual isotropic displacement parameters.
Crystals of compound (II) are triclinic; PFor all compounds, data collection: COLLECT (Hooft, 1999); cell
DENZO (Otwinowski & Minor, 1997) and COLLECT; data reduction: DENZO and COLLECT; program(s) used to solve structure: OSCAIL (McArdle, 2003) and SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: OSCAIL and SHELXL97 (Sheldrick, 1997); molecular graphics: PLATON (Spek, 2003); software used to prepare material for publication: SHELXL97 and PRPKAPPA (Ferguson, 1999).Fig. 1. The molecule of (I), showing the atom-labelling scheme. Displacement ellipsoids are drawn at the 30% probability level. | |
Fig. 2. The molecular components of (II), showing the atom-labelling scheme. Displacement ellipsoids are drawn at the 30% probability level. | |
Fig. 3. The two independent molecules of (III), showing the atom-labelling scheme: (a) molecule 1 and (b) molecule 2. Displacement ellipsoids are drawn at the 30% probability level. | |
Fig. 4. A stereoview of part of the crystal structure of (I), showing the formation of a chain of edge-fused rings along [100]. For clarity, H atoms not involved in the motifs shown have been omitted. | |
Fig. 5. A stereoview of part of the crystal structure of (II), showing the formation of a chain of edge-fused rings along [010]. For clarity, H atoms bonded to C atoms have been omitted. | |
Fig. 6. A stereoview of part of the crystal structure of (III), showing the formation of a C22(12) chain along [100]. For clarity, H atoms bonded to C atoms have been omitted. |
C12H8ClN3O3 | F(000) = 568 |
Mr = 277.66 | Dx = 1.633 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 2580 reflections |
a = 6.9964 (1) Å | θ = 3.4–27.5° |
b = 22.4244 (4) Å | µ = 0.35 mm−1 |
c = 7.2085 (1) Å | T = 120 K |
β = 93.0910 (11)° | Block, colourless |
V = 1129.30 (3) Å3 | 0.54 × 0.44 × 0.36 mm |
Z = 4 |
Nonius KappaCCD diffractometer | 2580 independent reflections |
Radiation source: Bruker-Nonius FR91 rotating anode | 2355 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.029 |
Detector resolution: 9.091 pixels mm-1 | θmax = 27.5°, θmin = 3.4° |
ϕ and ω scans | h = −9→9 |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | k = −29→28 |
Tmin = 0.835, Tmax = 0.886 | l = −9→9 |
13129 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.038 | H-atom parameters constrained |
wR(F2) = 0.104 | w = 1/[σ2(Fo2) + (0.0562P)2 + 0.4042P] where P = (Fo2 + 2Fc2)/3 |
S = 1.19 | (Δ/σ)max = 0.001 |
2580 reflections | Δρmax = 0.57 e Å−3 |
174 parameters | Δρmin = −0.47 e Å−3 |
0 restraints | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.078 (6) |
C12H8ClN3O3 | V = 1129.30 (3) Å3 |
Mr = 277.66 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 6.9964 (1) Å | µ = 0.35 mm−1 |
b = 22.4244 (4) Å | T = 120 K |
c = 7.2085 (1) Å | 0.54 × 0.44 × 0.36 mm |
β = 93.0910 (11)° |
Nonius KappaCCD diffractometer | 2580 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | 2355 reflections with I > 2σ(I) |
Tmin = 0.835, Tmax = 0.886 | Rint = 0.029 |
13129 measured reflections |
R[F2 > 2σ(F2)] = 0.038 | 0 restraints |
wR(F2) = 0.104 | H-atom parameters constrained |
S = 1.19 | Δρmax = 0.57 e Å−3 |
2580 reflections | Δρmin = −0.47 e Å−3 |
174 parameters |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.52679 (5) | 0.284888 (15) | 0.46820 (5) | 0.02029 (15) | |
O1 | 0.08692 (16) | 0.40079 (5) | 0.48472 (16) | 0.0251 (3) | |
O2 | 0.68027 (16) | 0.36970 (4) | 0.86260 (16) | 0.0239 (3) | |
O3 | 0.89794 (16) | 0.43787 (5) | 0.86521 (19) | 0.0323 (3) | |
N11 | 0.27639 (18) | 0.20372 (5) | 0.53499 (17) | 0.0185 (3) | |
N21 | 0.34113 (17) | 0.39216 (5) | 0.69864 (17) | 0.0172 (3) | |
N22 | 0.73074 (17) | 0.42201 (5) | 0.84092 (17) | 0.0180 (3) | |
C12 | 0.3039 (2) | 0.26202 (6) | 0.53946 (18) | 0.0154 (3) | |
C13 | 0.1696 (2) | 0.30406 (6) | 0.59056 (18) | 0.0149 (3) | |
C14 | −0.0066 (2) | 0.28190 (6) | 0.6405 (2) | 0.0180 (3) | |
C15 | −0.0387 (2) | 0.22109 (7) | 0.6399 (2) | 0.0199 (3) | |
C16 | 0.1063 (2) | 0.18371 (6) | 0.5865 (2) | 0.0205 (3) | |
C17 | 0.1949 (2) | 0.37087 (6) | 0.58400 (19) | 0.0162 (3) | |
C21 | 0.3999 (2) | 0.45183 (6) | 0.71937 (18) | 0.0151 (3) | |
C22 | 0.5865 (2) | 0.46698 (6) | 0.78843 (18) | 0.0150 (3) | |
C23 | 0.6440 (2) | 0.52602 (6) | 0.81192 (19) | 0.0180 (3) | |
C24 | 0.5170 (2) | 0.57156 (6) | 0.7690 (2) | 0.0195 (3) | |
C25 | 0.3328 (2) | 0.55773 (6) | 0.6999 (2) | 0.0190 (3) | |
C26 | 0.2747 (2) | 0.49912 (6) | 0.67514 (19) | 0.0174 (3) | |
H14 | −0.1043 | 0.3085 | 0.6748 | 0.022* | |
H15 | −0.1573 | 0.2053 | 0.6752 | 0.024* | |
H16 | 0.0842 | 0.1419 | 0.5863 | 0.025* | |
H21 | 0.4055 | 0.3657 | 0.7669 | 0.021* | |
H23 | 0.7707 | 0.5349 | 0.8575 | 0.022* | |
H24 | 0.5548 | 0.6120 | 0.7863 | 0.023* | |
H25 | 0.2453 | 0.5891 | 0.6691 | 0.023* | |
H26 | 0.1482 | 0.4909 | 0.6275 | 0.021* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0150 (2) | 0.0220 (2) | 0.0240 (2) | 0.00086 (12) | 0.00233 (14) | −0.00109 (12) |
O1 | 0.0258 (6) | 0.0176 (5) | 0.0305 (6) | 0.0031 (4) | −0.0114 (5) | 0.0001 (4) |
O2 | 0.0228 (6) | 0.0141 (5) | 0.0340 (6) | 0.0022 (4) | −0.0050 (5) | −0.0004 (4) |
O3 | 0.0134 (6) | 0.0306 (6) | 0.0526 (8) | −0.0006 (4) | −0.0006 (5) | 0.0048 (5) |
N11 | 0.0195 (6) | 0.0160 (6) | 0.0194 (6) | 0.0020 (5) | −0.0036 (5) | −0.0017 (4) |
N21 | 0.0176 (6) | 0.0124 (6) | 0.0209 (6) | 0.0009 (4) | −0.0043 (5) | 0.0004 (4) |
N22 | 0.0156 (6) | 0.0201 (6) | 0.0184 (6) | 0.0016 (5) | 0.0010 (5) | −0.0013 (5) |
C12 | 0.0144 (7) | 0.0174 (7) | 0.0142 (6) | −0.0002 (5) | −0.0026 (5) | 0.0002 (5) |
C13 | 0.0155 (7) | 0.0147 (6) | 0.0139 (6) | 0.0007 (5) | −0.0030 (5) | −0.0011 (5) |
C14 | 0.0161 (7) | 0.0198 (7) | 0.0178 (7) | 0.0005 (5) | −0.0004 (5) | −0.0025 (5) |
C15 | 0.0180 (7) | 0.0223 (7) | 0.0190 (7) | −0.0047 (5) | −0.0010 (5) | 0.0010 (5) |
C16 | 0.0249 (8) | 0.0151 (6) | 0.0208 (7) | −0.0024 (6) | −0.0044 (6) | 0.0006 (5) |
C17 | 0.0163 (7) | 0.0152 (6) | 0.0169 (6) | 0.0011 (5) | 0.0005 (5) | −0.0021 (5) |
C21 | 0.0179 (7) | 0.0131 (6) | 0.0141 (6) | −0.0005 (5) | 0.0010 (5) | −0.0007 (5) |
C22 | 0.0159 (7) | 0.0155 (6) | 0.0136 (6) | 0.0021 (5) | 0.0015 (5) | 0.0002 (5) |
C23 | 0.0186 (7) | 0.0186 (7) | 0.0167 (6) | −0.0038 (5) | 0.0016 (5) | −0.0007 (5) |
C24 | 0.0261 (8) | 0.0142 (6) | 0.0181 (7) | −0.0029 (5) | 0.0016 (6) | 0.0000 (5) |
C25 | 0.0240 (8) | 0.0144 (7) | 0.0186 (7) | 0.0027 (5) | 0.0001 (6) | 0.0008 (5) |
C26 | 0.0170 (7) | 0.0164 (7) | 0.0187 (6) | 0.0006 (5) | −0.0017 (5) | −0.0003 (5) |
N11—C12 | 1.3215 (18) | N21—H21 | 0.88 |
N11—C16 | 1.343 (2) | C21—C26 | 1.4011 (19) |
C12—C13 | 1.3945 (19) | C21—C22 | 1.414 (2) |
C12—Cl1 | 1.7453 (14) | C22—C23 | 1.3914 (19) |
C13—C14 | 1.394 (2) | C22—N22 | 1.4618 (18) |
C13—C17 | 1.5096 (18) | N22—O3 | 1.2262 (17) |
C14—C15 | 1.382 (2) | N22—O2 | 1.2373 (16) |
C14—H14 | 0.95 | C23—C24 | 1.378 (2) |
C15—C16 | 1.386 (2) | C23—H23 | 0.95 |
C15—H15 | 0.95 | C24—C25 | 1.392 (2) |
C16—H16 | 0.95 | C24—H24 | 0.95 |
C17—O1 | 1.2141 (17) | C25—C26 | 1.3843 (19) |
C17—N21 | 1.3664 (18) | C25—H25 | 0.95 |
N21—C21 | 1.4052 (17) | C26—H26 | 0.95 |
C12—N11—C16 | 116.98 (13) | C26—C21—N21 | 121.40 (13) |
N11—C12—C13 | 125.17 (13) | C26—C21—C22 | 116.89 (12) |
N11—C12—Cl1 | 114.49 (11) | N21—C21—C22 | 121.71 (12) |
C13—C12—Cl1 | 120.31 (11) | C23—C22—C21 | 121.81 (13) |
C14—C13—C12 | 116.41 (13) | C23—C22—N22 | 115.72 (12) |
C14—C13—C17 | 117.95 (12) | C21—C22—N22 | 122.47 (12) |
C12—C13—C17 | 125.51 (13) | O3—N22—O2 | 122.24 (12) |
C15—C14—C13 | 119.78 (14) | O3—N22—C22 | 118.47 (12) |
C15—C14—H14 | 120.1 | O2—N22—C22 | 119.28 (12) |
C13—C14—H14 | 120.1 | C24—C23—C22 | 119.94 (14) |
C14—C15—C16 | 118.47 (14) | C24—C23—H23 | 120.0 |
C14—C15—H15 | 120.8 | C22—C23—H23 | 120.0 |
C16—C15—H15 | 120.8 | C23—C24—C25 | 119.29 (13) |
N11—C16—C15 | 123.18 (13) | C23—C24—H24 | 120.4 |
N11—C16—H16 | 118.4 | C25—C24—H24 | 120.4 |
C15—C16—H16 | 118.4 | C26—C25—C24 | 121.15 (13) |
O1—C17—N21 | 125.81 (13) | C26—C25—H25 | 119.4 |
O1—C17—C13 | 119.77 (13) | C24—C25—H25 | 119.4 |
N21—C17—C13 | 114.40 (12) | C25—C26—C21 | 120.93 (13) |
C17—N21—C21 | 127.03 (12) | C25—C26—H26 | 119.5 |
C17—N21—H21 | 116.5 | C21—C26—H26 | 119.5 |
C21—N21—H21 | 116.5 | ||
C16—N11—C12—C13 | −1.0 (2) | C17—N21—C21—C26 | 23.4 (2) |
C16—N11—C12—Cl1 | −179.28 (10) | C17—N21—C21—C22 | −157.61 (14) |
N11—C12—C13—C14 | 0.0 (2) | C26—C21—C22—C23 | 0.1 (2) |
Cl1—C12—C13—C14 | 178.22 (10) | N21—C21—C22—C23 | −178.94 (12) |
N11—C12—C13—C17 | −175.73 (13) | C26—C21—C22—N22 | 179.63 (12) |
Cl1—C12—C13—C17 | 2.45 (18) | N21—C21—C22—N22 | 0.6 (2) |
C12—C13—C14—C15 | 0.9 (2) | C23—C22—N22—O3 | −14.27 (19) |
C17—C13—C14—C15 | 177.02 (13) | C21—C22—N22—O3 | 166.17 (13) |
C13—C14—C15—C16 | −0.9 (2) | C23—C22—N22—O2 | 164.44 (13) |
C12—N11—C16—C15 | 1.0 (2) | C21—C22—N22—O2 | −15.1 (2) |
C14—C15—C16—N11 | −0.1 (2) | C21—C22—C23—C24 | 0.6 (2) |
C14—C13—C17—O1 | −57.32 (19) | N22—C22—C23—C24 | −178.99 (12) |
C12—C13—C17—O1 | 118.39 (16) | C22—C23—C24—C25 | −0.9 (2) |
C14—C13—C17—N21 | 121.36 (14) | C23—C24—C25—C26 | 0.5 (2) |
C12—C13—C17—N21 | −62.93 (18) | C24—C25—C26—C21 | 0.1 (2) |
O1—C17—N21—C21 | −2.5 (2) | N21—C21—C26—C25 | 178.59 (13) |
C13—C17—N21—C21 | 178.88 (13) | C22—C21—C26—C25 | −0.4 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N21—H21···O2 | 0.88 | 2.01 | 2.6416 (16) | 128 |
C14—H14···O2i | 0.95 | 2.49 | 3.4084 (17) | 162 |
C25—H25···O1ii | 0.95 | 2.53 | 3.2921 (18) | 137 |
C26—H26···O1 | 0.95 | 2.30 | 2.8771 (18) | 119 |
Symmetry codes: (i) x−1, y, z; (ii) −x, −y+1, −z+1. |
C12H8ClN3O3·H2O | Z = 2 |
Mr = 295.68 | F(000) = 304 |
Triclinic, P1 | Dx = 1.547 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.5607 (4) Å | Cell parameters from 2891 reflections |
b = 7.6518 (3) Å | θ = 3.3–27.6° |
c = 12.6775 (5) Å | µ = 0.32 mm−1 |
α = 81.177 (3)° | T = 120 K |
β = 84.367 (2)° | Block, colourless |
γ = 61.172 (2)° | 0.2 × 0.2 × 0.2 mm |
V = 634.69 (5) Å3 |
Nonius KappaCCD diffractometer | 2891 independent reflections |
Radiation source: Bruker-Nonius FR91 rotating anode | 2318 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.028 |
Detector resolution: 9.091 pixels mm-1 | θmax = 27.6°, θmin = 3.3° |
ϕ and ω scans | h = −9→9 |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | k = −9→9 |
Tmin = 0.926, Tmax = 0.938 | l = −16→16 |
12769 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.044 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.129 | H-atom parameters constrained |
S = 1.08 | w = 1/[σ2(Fo2) + (0.074P)2 + 0.1161P] where P = (Fo2 + 2Fc2)/3 |
2891 reflections | (Δ/σ)max < 0.001 |
183 parameters | Δρmax = 0.27 e Å−3 |
0 restraints | Δρmin = −0.43 e Å−3 |
C12H8ClN3O3·H2O | γ = 61.172 (2)° |
Mr = 295.68 | V = 634.69 (5) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.5607 (4) Å | Mo Kα radiation |
b = 7.6518 (3) Å | µ = 0.32 mm−1 |
c = 12.6775 (5) Å | T = 120 K |
α = 81.177 (3)° | 0.2 × 0.2 × 0.2 mm |
β = 84.367 (2)° |
Nonius KappaCCD diffractometer | 2891 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | 2318 reflections with I > 2σ(I) |
Tmin = 0.926, Tmax = 0.938 | Rint = 0.028 |
12769 measured reflections |
R[F2 > 2σ(F2)] = 0.044 | 0 restraints |
wR(F2) = 0.129 | H-atom parameters constrained |
S = 1.08 | Δρmax = 0.27 e Å−3 |
2891 reflections | Δρmin = −0.43 e Å−3 |
183 parameters |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.58252 (7) | 0.28229 (7) | 0.09351 (4) | 0.05063 (18) | |
O1 | 0.2316 (3) | 0.4034 (2) | 0.26846 (10) | 0.0603 (4) | |
O2 | 0.3065 (3) | −0.4763 (2) | 0.56158 (12) | 0.0656 (4) | |
O3 | 0.2362 (3) | −0.3722 (2) | 0.71615 (10) | 0.0633 (4) | |
N11 | 0.3821 (2) | 0.2690 (2) | −0.05734 (11) | 0.0429 (4) | |
N21 | 0.2574 (2) | 0.09090 (19) | 0.30122 (10) | 0.0361 (3) | |
N23 | 0.2669 (2) | −0.3479 (2) | 0.61966 (11) | 0.0412 (3) | |
C12 | 0.3844 (3) | 0.2642 (2) | 0.04717 (12) | 0.0354 (4) | |
C13 | 0.2435 (3) | 0.2419 (2) | 0.11982 (12) | 0.0353 (4) | |
C14 | 0.0934 (3) | 0.2215 (3) | 0.07740 (14) | 0.0434 (4) | |
C15 | 0.0853 (3) | 0.2292 (3) | −0.03172 (14) | 0.0482 (4) | |
C16 | 0.2316 (3) | 0.2545 (3) | −0.09540 (13) | 0.0479 (4) | |
C17 | 0.2453 (3) | 0.2537 (2) | 0.23712 (12) | 0.0384 (4) | |
C21 | 0.2457 (2) | 0.0631 (2) | 0.41391 (11) | 0.0320 (3) | |
C22 | 0.2681 (2) | −0.1225 (2) | 0.46136 (12) | 0.0337 (3) | |
C23 | 0.2491 (2) | −0.1538 (2) | 0.57115 (12) | 0.0348 (3) | |
C24 | 0.2096 (3) | −0.0094 (3) | 0.63625 (13) | 0.0455 (4) | |
C25 | 0.1907 (4) | 0.1725 (3) | 0.58779 (14) | 0.0518 (5) | |
C26 | 0.2090 (3) | 0.2107 (3) | 0.47781 (13) | 0.0429 (4) | |
O4 | 0.2818 (2) | 0.7597 (2) | 0.20376 (11) | 0.0545 (4) | |
H14 | −0.0043 | 0.2022 | 0.1235 | 0.052* | |
H15 | −0.0181 | 0.2174 | −0.0619 | 0.058* | |
H16 | 0.2252 | 0.2620 | −0.1705 | 0.057* | |
H21 | 0.2743 | −0.0102 | 0.2690 | 0.043* | |
H22 | 0.2958 | −0.2257 | 0.4191 | 0.040* | |
H24 | 0.1960 | −0.0345 | 0.7116 | 0.055* | |
H25 | 0.1645 | 0.2743 | 0.6307 | 0.062* | |
H26 | 0.1965 | 0.3368 | 0.4462 | 0.052* | |
H41 | 0.2596 | 0.6615 | 0.2265 | 0.090 (9)* | |
H42 | 0.3830 | 0.7389 | 0.1572 | 0.085 (9)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0545 (3) | 0.0588 (3) | 0.0478 (3) | −0.0348 (2) | −0.0055 (2) | −0.0018 (2) |
O1 | 0.1161 (13) | 0.0478 (8) | 0.0343 (6) | −0.0540 (8) | 0.0103 (7) | −0.0075 (5) |
O2 | 0.1015 (12) | 0.0409 (7) | 0.0608 (9) | −0.0413 (8) | 0.0081 (8) | −0.0041 (6) |
O3 | 0.0969 (12) | 0.0604 (9) | 0.0399 (7) | −0.0483 (8) | −0.0010 (7) | 0.0115 (6) |
N11 | 0.0582 (9) | 0.0431 (8) | 0.0307 (7) | −0.0280 (7) | 0.0019 (6) | −0.0019 (6) |
N21 | 0.0528 (8) | 0.0319 (7) | 0.0271 (6) | −0.0233 (6) | −0.0003 (6) | −0.0028 (5) |
N23 | 0.0466 (8) | 0.0394 (8) | 0.0405 (8) | −0.0251 (7) | −0.0033 (6) | 0.0048 (6) |
C12 | 0.0454 (9) | 0.0300 (7) | 0.0315 (8) | −0.0195 (7) | −0.0015 (6) | 0.0001 (6) |
C13 | 0.0474 (9) | 0.0297 (7) | 0.0287 (7) | −0.0190 (7) | −0.0001 (6) | −0.0011 (6) |
C14 | 0.0488 (10) | 0.0458 (9) | 0.0401 (9) | −0.0271 (8) | 0.0000 (7) | −0.0022 (7) |
C15 | 0.0564 (11) | 0.0509 (10) | 0.0430 (9) | −0.0291 (9) | −0.0113 (8) | −0.0028 (8) |
C16 | 0.0708 (13) | 0.0487 (10) | 0.0293 (8) | −0.0323 (9) | −0.0066 (8) | −0.0020 (7) |
C17 | 0.0533 (10) | 0.0357 (8) | 0.0295 (8) | −0.0248 (7) | 0.0020 (7) | −0.0025 (6) |
C21 | 0.0369 (8) | 0.0338 (8) | 0.0272 (7) | −0.0187 (6) | −0.0028 (6) | −0.0008 (6) |
C22 | 0.0384 (8) | 0.0311 (8) | 0.0331 (8) | −0.0182 (7) | −0.0001 (6) | −0.0029 (6) |
C23 | 0.0376 (8) | 0.0340 (8) | 0.0345 (8) | −0.0201 (7) | −0.0044 (6) | 0.0040 (6) |
C24 | 0.0683 (12) | 0.0504 (10) | 0.0267 (8) | −0.0360 (9) | −0.0035 (7) | −0.0003 (7) |
C25 | 0.0875 (15) | 0.0485 (10) | 0.0332 (9) | −0.0426 (10) | −0.0004 (9) | −0.0079 (7) |
C26 | 0.0670 (12) | 0.0379 (9) | 0.0329 (8) | −0.0326 (8) | −0.0026 (7) | −0.0017 (7) |
O4 | 0.0750 (10) | 0.0460 (7) | 0.0529 (8) | −0.0375 (7) | 0.0173 (7) | −0.0160 (6) |
Cl1—C12 | 1.7336 (17) | C21—C22 | 1.391 (2) |
N11—C12 | 1.321 (2) | C21—C26 | 1.394 (2) |
N11—C16 | 1.337 (2) | C22—C23 | 1.381 (2) |
C12—C13 | 1.395 (2) | C22—H22 | 0.95 |
C13—C14 | 1.385 (2) | C23—C24 | 1.380 (2) |
C13—C17 | 1.505 (2) | C23—N23 | 1.465 (2) |
C14—C15 | 1.382 (2) | N23—O2 | 1.222 (2) |
C14—H14 | 0.95 | N23—O3 | 1.2251 (18) |
C15—C16 | 1.377 (3) | C24—C25 | 1.378 (3) |
C15—H15 | 0.95 | C24—H24 | 0.95 |
C16—H16 | 0.95 | C25—C26 | 1.387 (2) |
C17—O1 | 1.224 (2) | C25—H25 | 0.95 |
C17—N21 | 1.347 (2) | C26—H26 | 0.95 |
N21—C21 | 1.4122 (18) | O4—H41 | 0.8492 |
N21—H21 | 0.88 | O4—H42 | 0.8845 |
C12—N11—C16 | 117.10 (15) | C22—C21—C26 | 119.57 (14) |
N11—C12—C13 | 124.66 (16) | C22—C21—N21 | 116.55 (13) |
N11—C12—Cl1 | 115.73 (13) | C26—C21—N21 | 123.86 (14) |
C13—C12—Cl1 | 119.60 (12) | C23—C22—C21 | 118.65 (14) |
C14—C13—C12 | 116.42 (14) | C23—C22—H22 | 120.7 |
C14—C13—C17 | 121.49 (15) | C21—C22—H22 | 120.7 |
C12—C13—C17 | 121.96 (15) | C24—C23—C22 | 123.02 (14) |
C15—C14—C13 | 120.17 (16) | C24—C23—N23 | 118.97 (14) |
C15—C14—H14 | 119.9 | C22—C23—N23 | 117.99 (14) |
C13—C14—H14 | 119.9 | O2—N23—O3 | 123.00 (15) |
C16—C15—C14 | 118.00 (17) | O2—N23—C23 | 118.44 (14) |
C16—C15—H15 | 121.0 | O3—N23—C23 | 118.53 (14) |
C14—C15—H15 | 121.0 | C25—C24—C23 | 117.42 (15) |
N11—C16—C15 | 123.61 (16) | C25—C24—H24 | 121.3 |
N11—C16—H16 | 118.2 | C23—C24—H24 | 121.3 |
C15—C16—H16 | 118.2 | C24—C25—C26 | 121.60 (16) |
O1—C17—N21 | 124.71 (14) | C24—C25—H25 | 119.2 |
O1—C17—C13 | 120.95 (14) | C26—C25—H25 | 119.2 |
N21—C17—C13 | 114.31 (13) | C25—C26—C21 | 119.71 (15) |
C17—N21—C21 | 127.89 (13) | C25—C26—H26 | 120.1 |
C17—N21—H21 | 116.1 | C21—C26—H26 | 120.1 |
C21—N21—H21 | 116.1 | H41—O4—H42 | 117.9 |
C16—N11—C12—C13 | 1.1 (2) | C17—N21—C21—C22 | −178.35 (16) |
C16—N11—C12—Cl1 | 179.74 (13) | C17—N21—C21—C26 | 3.2 (3) |
N11—C12—C13—C14 | 0.7 (2) | C26—C21—C22—C23 | 1.3 (2) |
Cl1—C12—C13—C14 | −177.87 (12) | N21—C21—C22—C23 | −177.24 (14) |
N11—C12—C13—C17 | −175.17 (15) | C21—C22—C23—C24 | −0.3 (3) |
Cl1—C12—C13—C17 | 6.2 (2) | C21—C22—C23—N23 | 178.16 (14) |
C12—C13—C14—C15 | −1.7 (2) | C24—C23—N23—O2 | −178.33 (17) |
C17—C13—C14—C15 | 174.18 (16) | C22—C23—N23—O2 | 3.2 (2) |
C13—C14—C15—C16 | 0.9 (3) | C24—C23—N23—O3 | 3.6 (2) |
C12—N11—C16—C15 | −2.0 (3) | C22—C23—N23—O3 | −174.91 (16) |
C14—C15—C16—N11 | 1.0 (3) | C22—C23—C24—C25 | −0.6 (3) |
C14—C13—C17—O1 | −118.0 (2) | N23—C23—C24—C25 | −179.00 (17) |
C12—C13—C17—O1 | 57.7 (2) | C23—C24—C25—C26 | 0.4 (3) |
C14—C13—C17—N21 | 60.3 (2) | C24—C25—C26—C21 | 0.5 (3) |
C12—C13—C17—N21 | −123.99 (17) | C22—C21—C26—C25 | −1.4 (3) |
O1—C17—N21—C21 | 3.8 (3) | N21—C21—C26—C25 | 176.98 (18) |
C13—C17—N21—C21 | −174.38 (15) |
D—H···A | D—H | H···A | D···A | D—H···A |
N21—H21···O4i | 0.88 | 2.03 | 2.907 (2) | 173 |
O4—H41···O1 | 0.85 | 2.07 | 2.916 (2) | 173 |
O4—H42···N11ii | 0.88 | 2.06 | 2.935 (2) | 170 |
C26—H26···O1 | 0.95 | 2.25 | 2.864 (2) | 121 |
Symmetry codes: (i) x, y−1, z; (ii) −x+1, −y+1, −z. |
C12H8ClN3O3 | F(000) = 1136 |
Mr = 277.66 | Dx = 1.542 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 5494 reflections |
a = 7.2385 (2) Å | θ = 2.9–27.6° |
b = 24.5094 (6) Å | µ = 0.33 mm−1 |
c = 13.5018 (4) Å | T = 120 K |
β = 92.834 (2)° | Block, colourless |
V = 2392.44 (11) Å3 | 0.2 × 0.1 × 0.1 mm |
Z = 8 |
Nonius KappaCCD diffractometer | 5494 independent reflections |
Radiation source: Bruker-Nonius FR91 rotating anode | 3366 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.079 |
Detector resolution: 9.091 pixels mm-1 | θmax = 27.6°, θmin = 2.9° |
ϕ and ω scans | h = −9→9 |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | k = −31→30 |
Tmin = 0.945, Tmax = 0.968 | l = −17→17 |
5494 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.051 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.143 | H-atom parameters constrained |
S = 1.00 | w = 1/[σ2(Fo2) + (0.073P)2] where P = (Fo2 + 2Fc2)/3 |
5494 reflections | (Δ/σ)max = 0.001 |
343 parameters | Δρmax = 0.29 e Å−3 |
0 restraints | Δρmin = −0.44 e Å−3 |
C12H8ClN3O3 | V = 2392.44 (11) Å3 |
Mr = 277.66 | Z = 8 |
Monoclinic, P21/n | Mo Kα radiation |
a = 7.2385 (2) Å | µ = 0.33 mm−1 |
b = 24.5094 (6) Å | T = 120 K |
c = 13.5018 (4) Å | 0.2 × 0.1 × 0.1 mm |
β = 92.834 (2)° |
Nonius KappaCCD diffractometer | 5494 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | 3366 reflections with I > 2σ(I) |
Tmin = 0.945, Tmax = 0.968 | Rint = 0.079 |
5494 measured reflections |
R[F2 > 2σ(F2)] = 0.051 | 0 restraints |
wR(F2) = 0.143 | H-atom parameters constrained |
S = 1.00 | Δρmax = 0.29 e Å−3 |
5494 reflections | Δρmin = −0.44 e Å−3 |
343 parameters |
x | y | z | Uiso*/Ueq | ||
Cl12 | 0.93279 (9) | 0.69680 (2) | 0.66272 (4) | 0.02873 (18) | |
O11 | 1.0754 (3) | 0.83940 (7) | 0.74087 (16) | 0.0480 (6) | |
O12 | 0.2074 (3) | 0.99261 (6) | 0.58346 (13) | 0.0319 (4) | |
O13 | 0.4593 (2) | 1.04072 (6) | 0.58583 (12) | 0.0287 (4) | |
N11 | 1.0557 (3) | 0.66161 (7) | 0.83516 (14) | 0.0217 (4) | |
N21 | 0.7716 (3) | 0.81689 (7) | 0.75206 (13) | 0.0196 (4) | |
N24 | 0.3761 (3) | 0.99758 (7) | 0.59832 (14) | 0.0238 (5) | |
C12 | 1.0031 (3) | 0.70646 (9) | 0.78670 (16) | 0.0197 (5) | |
C13 | 1.0065 (3) | 0.75853 (9) | 0.82673 (17) | 0.0211 (5) | |
C14 | 1.0703 (4) | 0.76385 (9) | 0.92505 (18) | 0.0249 (6) | |
C15 | 1.1218 (3) | 0.71762 (9) | 0.97860 (18) | 0.0234 (5) | |
C16 | 1.1114 (3) | 0.66747 (9) | 0.93093 (17) | 0.0225 (5) | |
C17 | 0.9547 (4) | 0.80889 (9) | 0.76783 (18) | 0.0231 (5) | |
C21 | 0.6817 (3) | 0.86260 (8) | 0.70840 (16) | 0.0187 (5) | |
C22 | 0.4896 (3) | 0.86073 (8) | 0.70096 (16) | 0.0205 (5) | |
C23 | 0.3897 (3) | 0.90496 (8) | 0.66402 (16) | 0.0196 (5) | |
C24 | 0.4841 (3) | 0.95029 (8) | 0.63428 (16) | 0.0209 (5) | |
C25 | 0.6744 (3) | 0.95342 (9) | 0.64081 (16) | 0.0221 (5) | |
C26 | 0.7754 (3) | 0.90911 (8) | 0.67751 (16) | 0.0208 (5) | |
Cl32 | 0.42948 (9) | 0.69468 (2) | 0.66056 (4) | 0.03089 (19) | |
O21 | 0.5793 (3) | 0.54792 (7) | 0.73644 (15) | 0.0400 (5) | |
O22 | −0.2799 (3) | 0.39905 (8) | 0.54869 (15) | 0.0512 (6) | |
O23 | −0.0226 (3) | 0.35435 (7) | 0.53995 (14) | 0.0524 (6) | |
N31 | 0.5494 (3) | 0.72622 (7) | 0.83614 (15) | 0.0242 (5) | |
N41 | 0.2759 (3) | 0.57478 (7) | 0.72771 (14) | 0.0214 (4) | |
N44 | −0.1105 (4) | 0.39612 (9) | 0.55726 (16) | 0.0404 (6) | |
C32 | 0.4996 (3) | 0.68234 (9) | 0.78379 (17) | 0.0210 (5) | |
C33 | 0.5028 (3) | 0.62914 (9) | 0.81950 (17) | 0.0218 (5) | |
C34 | 0.5620 (3) | 0.62221 (9) | 0.91846 (18) | 0.0280 (6) | |
C35 | 0.6082 (4) | 0.66748 (10) | 0.97554 (19) | 0.0287 (6) | |
C36 | 0.5993 (3) | 0.71837 (9) | 0.93195 (18) | 0.0252 (6) | |
C37 | 0.4570 (4) | 0.57985 (9) | 0.75576 (18) | 0.0248 (6) | |
C41 | 0.1888 (3) | 0.53077 (8) | 0.67670 (17) | 0.0213 (5) | |
C42 | −0.0027 (3) | 0.53272 (9) | 0.66533 (17) | 0.0230 (5) | |
C43 | −0.1021 (4) | 0.48949 (9) | 0.62399 (17) | 0.0283 (6) | |
C44 | −0.0050 (4) | 0.44408 (9) | 0.59327 (17) | 0.0290 (6) | |
C45 | 0.1850 (4) | 0.44203 (9) | 0.60068 (18) | 0.0313 (6) | |
C46 | 0.2844 (4) | 0.48558 (9) | 0.64170 (18) | 0.0276 (6) | |
H14 | 1.0784 | 0.7988 | 0.9552 | 0.030* | |
H15 | 1.1633 | 0.7202 | 1.0463 | 0.028* | |
H16 | 1.1454 | 0.6357 | 0.9679 | 0.027* | |
H21 | 0.7004 | 0.7897 | 0.7781 | 0.024* | |
H22 | 0.4268 | 0.8289 | 0.7213 | 0.025* | |
H23 | 0.2584 | 0.9040 | 0.6593 | 0.023* | |
H25 | 0.7357 | 0.9855 | 0.6204 | 0.027* | |
H26 | 0.9067 | 0.9103 | 0.6817 | 0.025* | |
H34 | 0.5706 | 0.5867 | 0.9465 | 0.034* | |
H35 | 0.6453 | 0.6636 | 1.0436 | 0.034* | |
H36 | 0.6301 | 0.7493 | 0.9718 | 0.030* | |
H41 | 0.1867 | 0.5974 | 0.7573 | 0.026* | |
H42 | −0.0664 | 0.5642 | 0.6863 | 0.028* | |
H43 | −0.2333 | 0.4908 | 0.6168 | 0.034* | |
H45 | 0.2481 | 0.4108 | 0.5777 | 0.038* | |
H46 | 0.4157 | 0.4848 | 0.6460 | 0.033* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl12 | 0.0339 (4) | 0.0296 (3) | 0.0221 (3) | 0.0024 (3) | −0.0040 (3) | −0.0013 (2) |
O11 | 0.022 (12) | 0.0402 (10) | 0.0830 (15) | 0.0017 (9) | 0.0082 (10) | 0.0358 (11) |
O12 | 0.0296 (12) | 0.0295 (9) | 0.0360 (11) | 0.0089 (8) | −0.0043 (9) | 0.0025 (8) |
O13 | 0.0431 (12) | 0.0152 (8) | 0.0278 (10) | 0.0015 (8) | 0.0014 (8) | 0.0011 (7) |
N11 | 0.0213 (12) | 0.0192 (9) | 0.0246 (11) | 0.0012 (8) | 0.0022 (9) | 0.0010 (8) |
N21 | 0.0194 (12) | 0.0159 (9) | 0.0236 (11) | −0.0022 (8) | 0.0023 (9) | 0.0041 (8) |
N24 | 0.0329 (14) | 0.0200 (10) | 0.0185 (10) | 0.0050 (9) | 0.0002 (9) | −0.0013 (8) |
C12 | 0.0140 (13) | 0.0236 (12) | 0.0216 (12) | 0.0005 (10) | 0.0030 (10) | −0.0002 (10) |
C13 | 0.0168 (13) | 0.0212 (11) | 0.0259 (13) | 0.0007 (10) | 0.0052 (10) | 0.0034 (10) |
C14 | 0.0308 (16) | 0.0173 (11) | 0.0267 (13) | −0.0013 (10) | 0.0033 (11) | −0.0031 (10) |
C15 | 0.0257 (15) | 0.0227 (12) | 0.0219 (12) | −0.0003 (10) | 0.0011 (10) | −0.0007 (10) |
C16 | 0.0222 (14) | 0.0206 (11) | 0.0245 (13) | 0.0012 (10) | 0.0002 (10) | 0.0050 (10) |
C17 | 0.0231 (15) | 0.0191 (11) | 0.0272 (13) | −0.0001 (10) | 0.0037 (11) | 0.0034 (10) |
C21 | 0.0223 (14) | 0.0145 (10) | 0.0193 (12) | 0.0014 (9) | 0.0000 (10) | 0.0002 (9) |
C22 | 0.0227 (15) | 0.0160 (11) | 0.0229 (12) | −0.0018 (10) | 0.0033 (10) | −0.0003 (9) |
C23 | 0.0195 (14) | 0.0204 (11) | 0.0187 (11) | 0.0028 (10) | −0.0003 (10) | −0.0017 (9) |
C24 | 0.0280 (15) | 0.0156 (11) | 0.0189 (12) | 0.0052 (10) | 0.0010 (10) | −0.0003 (9) |
C25 | 0.0274 (15) | 0.0175 (11) | 0.0216 (12) | −0.0009 (10) | 0.0035 (11) | 0.0025 (9) |
C26 | 0.0199 (14) | 0.0190 (11) | 0.0235 (12) | −0.0020 (10) | 0.0022 (10) | 0.0016 (10) |
Cl32 | 0.0333 (4) | 0.0331 (3) | 0.0260 (3) | −0.0046 (3) | −0.0020 (3) | 0.0083 (3) |
O21 | 0.0231 (11) | 0.0329 (10) | 0.0639 (14) | 0.0050 (8) | 0.0024 (9) | −0.0160 (9) |
O22 | 0.0585 (16) | 0.0476 (12) | 0.0461 (13) | −0.0264 (11) | −0.0118 (11) | −0.0019 (10) |
O23 | 0.0890 (18) | 0.0268 (10) | 0.0423 (12) | −0.0114 (11) | 0.0113 (11) | −0.0117 (9) |
N31 | 0.0204 (12) | 0.0223 (10) | 0.0301 (12) | −0.0031 (8) | 0.0032 (9) | 0.0039 (9) |
N41 | 0.0218 (12) | 0.0164 (9) | 0.0262 (11) | 0.0022 (8) | 0.0033 (9) | −0.0013 (8) |
N44 | 0.070 (2) | 0.0267 (12) | 0.0239 (12) | −0.0172 (13) | 0.0011 (12) | −0.0025 (10) |
C32 | 0.0126 (13) | 0.0255 (12) | 0.0250 (13) | −0.0004 (10) | 0.0018 (10) | 0.0041 (10) |
C33 | 0.0150 (13) | 0.0220 (11) | 0.0286 (13) | −0.0001 (10) | 0.0029 (10) | 0.0028 (10) |
C34 | 0.0280 (16) | 0.0218 (12) | 0.0339 (14) | 0.0027 (10) | −0.0005 (12) | 0.0061 (11) |
C35 | 0.0262 (16) | 0.0318 (13) | 0.0276 (13) | 0.0023 (11) | −0.0034 (11) | 0.0024 (11) |
C36 | 0.0185 (14) | 0.0251 (12) | 0.0320 (14) | −0.0020 (10) | −0.0006 (11) | −0.0015 (11) |
C37 | 0.0238 (15) | 0.0203 (12) | 0.0303 (14) | 0.0010 (11) | 0.0019 (11) | 0.0012 (10) |
C41 | 0.0278 (15) | 0.0183 (11) | 0.0181 (12) | −0.0012 (10) | 0.0029 (10) | 0.0028 (9) |
C42 | 0.0272 (15) | 0.0200 (11) | 0.0217 (13) | 0.0016 (10) | 0.0015 (10) | 0.0019 (10) |
C43 | 0.0350 (17) | 0.0292 (13) | 0.0205 (13) | −0.0066 (12) | 0.0009 (11) | 0.0035 (11) |
C44 | 0.0451 (19) | 0.0234 (12) | 0.0184 (13) | −0.0117 (12) | 0.0018 (12) | 0.0006 (10) |
C45 | 0.051 (2) | 0.0196 (12) | 0.0243 (14) | 0.0033 (12) | 0.0070 (12) | −0.0022 (10) |
C46 | 0.0294 (16) | 0.0250 (12) | 0.0289 (14) | 0.0035 (11) | 0.0062 (11) | 0.0000 (11) |
N11—C12 | 1.326 (3) | N31—C32 | 1.327 (3) |
N11—C16 | 1.343 (3) | N31—C36 | 1.340 (3) |
C12—C13 | 1.386 (3) | C32—C33 | 1.390 (3) |
C12—Cl12 | 1.741 (2) | C32—Cl32 | 1.742 (2) |
C13—C14 | 1.390 (3) | C33—C34 | 1.393 (3) |
C13—C17 | 1.506 (3) | C33—C37 | 1.510 (3) |
C14—C15 | 1.385 (3) | C34—C35 | 1.383 (3) |
C14—H14 | 0.95 | C34—H34 | 0.95 |
C15—C16 | 1.388 (3) | C35—C36 | 1.379 (3) |
C15—H15 | 0.95 | C35—H35 | 0.95 |
C16—H16 | 0.95 | C36—H36 | 0.95 |
C17—O11 | 1.219 (3) | C37—O21 | 1.220 (3) |
C17—N21 | 1.346 (3) | C37—N41 | 1.352 (3) |
N21—C21 | 1.410 (3) | N41—C41 | 1.412 (3) |
N21—H21 | 0.9237 | N41—H41 | 0.9536 |
C21—C22 | 1.390 (3) | C41—C42 | 1.387 (3) |
C21—C26 | 1.400 (3) | C41—C46 | 1.400 (3) |
C22—C23 | 1.382 (3) | C42—C43 | 1.383 (3) |
C22—H22 | 0.95 | C42—H42 | 0.95 |
C23—C24 | 1.375 (3) | C43—C44 | 1.391 (3) |
C23—H23 | 0.95 | C43—H43 | 0.95 |
C24—C25 | 1.378 (3) | C44—C45 | 1.375 (4) |
C24—N24 | 1.467 (3) | C44—N44 | 1.471 (3) |
N24—O12 | 1.234 (3) | N44—O22 | 1.228 (3) |
N24—O13 | 1.233 (2) | N44—O23 | 1.234 (3) |
C25—C26 | 1.387 (3) | C45—C46 | 1.387 (3) |
C25—H25 | 0.95 | C45—H45 | 0.95 |
C26—H26 | 0.95 | C46—H46 | 0.95 |
C12—N11—C16 | 116.86 (18) | C32—N31—C36 | 116.83 (19) |
N11—C12—C13 | 124.9 (2) | N31—C32—C33 | 125.2 (2) |
N11—C12—Cl12 | 115.14 (16) | N31—C32—Cl32 | 115.27 (16) |
C13—C12—Cl12 | 119.93 (17) | C33—C32—Cl32 | 119.55 (18) |
C12—C13—C14 | 117.2 (2) | C32—C33—C34 | 116.5 (2) |
C12—C13—C17 | 123.4 (2) | C32—C33—C37 | 123.6 (2) |
C14—C13—C17 | 119.33 (19) | C34—C33—C37 | 119.83 (19) |
C15—C14—C13 | 119.3 (2) | C35—C34—C33 | 119.4 (2) |
C15—C14—H14 | 120.3 | C35—C34—H34 | 120.3 |
C13—C14—H14 | 120.3 | C33—C34—H34 | 120.3 |
C14—C15—C16 | 118.4 (2) | C36—C35—C34 | 118.9 (2) |
C14—C15—H15 | 120.8 | C36—C35—H35 | 120.6 |
C16—C15—H15 | 120.8 | C34—C35—H35 | 120.6 |
N11—C16—C15 | 123.2 (2) | N31—C36—C35 | 123.1 (2) |
N11—C16—H16 | 118.4 | N31—C36—H36 | 118.4 |
C15—C16—H16 | 118.4 | C35—C36—H36 | 118.4 |
O11—C17—N21 | 125.3 (2) | O21—C37—N41 | 125.8 (2) |
O11—C17—C13 | 119.8 (2) | O21—C37—C33 | 119.6 (2) |
N21—C17—C13 | 114.8 (2) | N41—C37—C33 | 114.6 (2) |
C17—N21—C21 | 127.75 (19) | C37—N41—C41 | 127.63 (19) |
C17—N21—H21 | 113.5 | C37—N41—H41 | 119.8 |
C21—N21—H21 | 118.6 | C41—N41—H41 | 110.7 |
C22—C21—C26 | 120.2 (2) | C42—C41—C46 | 119.8 (2) |
C22—C21—N21 | 116.32 (19) | C42—C41—N41 | 116.6 (2) |
C26—C21—N21 | 123.4 (2) | C46—C41—N41 | 123.5 (2) |
C23—C22—C21 | 120.3 (2) | C43—C42—C41 | 121.0 (2) |
C23—C22—H22 | 119.9 | C43—C42—H42 | 119.5 |
C21—C22—H22 | 119.9 | C41—C42—H42 | 119.5 |
C24—C23—C22 | 118.7 (2) | C42—C43—C44 | 118.2 (2) |
C24—C23—H23 | 120.6 | C42—C43—H43 | 120.9 |
C22—C23—H23 | 120.6 | C44—C43—H43 | 120.9 |
C23—C24—C25 | 122.4 (2) | C45—C44—C43 | 121.8 (2) |
C23—C24—N24 | 118.1 (2) | C45—C44—N44 | 119.7 (2) |
C25—C24—N24 | 119.5 (2) | C43—C44—N44 | 118.4 (3) |
O12—N24—O13 | 123.31 (19) | O22—N44—O23 | 123.6 (2) |
O12—N24—C24 | 118.87 (19) | O22—N44—C44 | 118.9 (2) |
O13—N24—C24 | 117.8 (2) | O23—N44—C44 | 117.5 (3) |
C24—C25—C26 | 119.1 (2) | C44—C45—C46 | 119.9 (2) |
C24—C25—H25 | 120.4 | C44—C45—H45 | 120.1 |
C26—C25—H25 | 120.4 | C46—C45—H45 | 120.1 |
C25—C26—C21 | 119.3 (2) | C45—C46—C41 | 119.2 (2) |
C25—C26—H26 | 120.3 | C45—C46—H46 | 120.4 |
C21—C26—H26 | 120.3 | C41—C46—H46 | 120.4 |
C16—N11—C12—C13 | 1.9 (4) | C36—N31—C32—C33 | −2.9 (4) |
C16—N11—C12—Cl12 | 179.80 (17) | C36—N31—C32—Cl32 | 178.23 (17) |
N11—C12—C13—C14 | 0.1 (4) | N31—C32—C33—C34 | 0.5 (4) |
Cl12—C12—C13—C14 | −177.70 (18) | Cl32—C32—C33—C34 | 179.39 (18) |
N11—C12—C13—C17 | 176.7 (2) | N31—C32—C33—C37 | −175.8 (2) |
Cl12—C12—C13—C17 | −1.1 (3) | Cl32—C32—C33—C37 | 3.1 (3) |
C12—C13—C14—C15 | −1.8 (4) | C32—C33—C34—C35 | 1.9 (4) |
C17—C13—C14—C15 | −178.5 (2) | C37—C33—C34—C35 | 178.3 (2) |
C13—C14—C15—C16 | 1.4 (4) | C33—C34—C35—C36 | −1.9 (4) |
C12—N11—C16—C15 | −2.3 (4) | C32—N31—C36—C35 | 2.9 (4) |
C14—C15—C16—N11 | 0.7 (4) | C34—C35—C36—N31 | −0.6 (4) |
C12—C13—C17—O11 | −103.9 (3) | C32—C33—C37—O21 | 110.5 (3) |
C14—C13—C17—O11 | 72.7 (3) | C34—C33—C37—O21 | −65.7 (3) |
C12—C13—C17—N21 | 78.1 (3) | C32—C33—C37—N41 | −71.5 (3) |
C14—C13—C17—N21 | −105.4 (3) | C34—C33—C37—N41 | 112.3 (3) |
O11—C17—N21—C21 | −4.6 (4) | O21—C37—N41—C41 | 4.4 (4) |
C13—C17—N21—C21 | 173.29 (19) | C33—C37—N41—C41 | −173.4 (2) |
C17—N21—C21—C22 | −179.8 (2) | C37—N41—C41—C42 | 173.6 (2) |
C17—N21—C21—C26 | −2.7 (3) | C37—N41—C41—C46 | −3.9 (4) |
C26—C21—C22—C23 | −0.7 (3) | C46—C41—C42—C43 | 3.1 (3) |
N21—C21—C22—C23 | 176.54 (19) | N41—C41—C42—C43 | −174.5 (2) |
C21—C22—C23—C24 | 0.5 (3) | C41—C42—C43—C44 | −0.5 (3) |
C22—C23—C24—C25 | −0.6 (3) | C42—C43—C44—C45 | −1.7 (3) |
C22—C23—C24—N24 | −178.02 (19) | C42—C43—C44—N44 | 174.8 (2) |
C23—C24—N24—O12 | −9.6 (3) | C45—C44—N44—O22 | −178.2 (2) |
C25—C24—N24—O12 | 172.9 (2) | C43—C44—N44—O22 | 5.2 (3) |
C23—C24—N24—O13 | 169.4 (2) | C45—C44—N44—O23 | 3.8 (3) |
C25—C24—N24—O13 | −8.1 (3) | C43—C44—N44—O23 | −172.8 (2) |
C23—C24—C25—C26 | 0.8 (3) | C43—C44—C45—C46 | 1.4 (4) |
N24—C24—C25—C26 | 178.19 (19) | N44—C44—C45—C46 | −175.1 (2) |
C24—C25—C26—C21 | −0.9 (3) | C44—C45—C46—C41 | 1.1 (4) |
C22—C21—C26—C25 | 0.9 (3) | C42—C41—C46—C45 | −3.3 (3) |
N21—C21—C26—C25 | −176.1 (2) | N41—C41—C46—C45 | 174.0 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N21—H21···N31 | 0.92 | 2.08 | 2.999 (3) | 178 |
N41—H41···N11i | 0.95 | 2.14 | 3.067 (3) | 164 |
C22—H22···O11i | 0.95 | 2.58 | 3.117 (3) | 116 |
C23—H23···O11i | 0.95 | 2.37 | 3.011 (3) | 124 |
C26—H26···O11 | 0.95 | 2.25 | 2.861 (3) | 121 |
C43—H43···O21i | 0.95 | 2.57 | 3.166 (3) | 121 |
C46—H46···O21 | 0.95 | 2.27 | 2.874 (3) | 121 |
Symmetry code: (i) x−1, y, z. |
Experimental details
(I) | (II) | (III) | |
Crystal data | |||
Chemical formula | C12H8ClN3O3 | C12H8ClN3O3·H2O | C12H8ClN3O3 |
Mr | 277.66 | 295.68 | 277.66 |
Crystal system, space group | Monoclinic, P21/c | Triclinic, P1 | Monoclinic, P21/n |
Temperature (K) | 120 | 120 | 120 |
a, b, c (Å) | 6.9964 (1), 22.4244 (4), 7.2085 (1) | 7.5607 (4), 7.6518 (3), 12.6775 (5) | 7.2385 (2), 24.5094 (6), 13.5018 (4) |
α, β, γ (°) | 90, 93.0910 (11), 90 | 81.177 (3), 84.367 (2), 61.172 (2) | 90, 92.834 (2), 90 |
V (Å3) | 1129.30 (3) | 634.69 (5) | 2392.44 (11) |
Z | 4 | 2 | 8 |
Radiation type | Mo Kα | Mo Kα | Mo Kα |
µ (mm−1) | 0.35 | 0.32 | 0.33 |
Crystal size (mm) | 0.54 × 0.44 × 0.36 | 0.2 × 0.2 × 0.2 | 0.2 × 0.1 × 0.1 |
Data collection | |||
Diffractometer | Nonius KappaCCD diffractometer | Nonius KappaCCD diffractometer | Nonius KappaCCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2003) | Multi-scan (SADABS; Sheldrick, 2003) | Multi-scan (SADABS; Sheldrick, 2003) |
Tmin, Tmax | 0.835, 0.886 | 0.926, 0.938 | 0.945, 0.968 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 13129, 2580, 2355 | 12769, 2891, 2318 | 5494, 5494, 3366 |
Rint | 0.029 | 0.028 | 0.079 |
(sin θ/λ)max (Å−1) | 0.651 | 0.651 | 0.651 |
Refinement | |||
R[F2 > 2σ(F2)], wR(F2), S | 0.038, 0.104, 1.19 | 0.044, 0.129, 1.08 | 0.051, 0.143, 1.00 |
No. of reflections | 2580 | 2891 | 5494 |
No. of parameters | 174 | 183 | 343 |
H-atom treatment | H-atom parameters constrained | H-atom parameters constrained | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.57, −0.47 | 0.27, −0.43 | 0.29, −0.44 |
Computer programs: COLLECT (Hooft, 1999), DENZO (Otwinowski & Minor, 1997) and COLLECT, DENZO and COLLECT, OSCAIL (McArdle, 2003) and SHELXS97 (Sheldrick, 1997), OSCAIL and SHELXL97 (Sheldrick, 1997), PLATON (Spek, 2003), SHELXL97 and PRPKAPPA (Ferguson, 1999).
N21—C21 | 1.4052 (17) | C22—N22 | 1.4618 (18) |
N21—C17—C13 | 114.40 (12) | C17—N21—C21 | 127.03 (12) |
C12—C13—C17—N21 | −62.93 (18) | C17—N21—C21—C22 | −157.61 (14) |
C13—C17—N21—C21 | 178.88 (13) | C21—C22—N22—O2 | −15.1 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N21—H21···O2 | 0.88 | 2.01 | 2.6416 (16) | 128 |
C14—H14···O2i | 0.95 | 2.49 | 3.4084 (17) | 162 |
C25—H25···O1ii | 0.95 | 2.53 | 3.2921 (18) | 137 |
C26—H26···O1 | 0.95 | 2.30 | 2.8771 (18) | 119 |
Symmetry codes: (i) x−1, y, z; (ii) −x, −y+1, −z+1. |
N21—C21 | 1.4122 (18) | C23—N23 | 1.465 (2) |
N21—C17—C13 | 114.31 (13) | C17—N21—C21 | 127.89 (13) |
C12—C13—C17—N21 | −123.99 (17) | C17—N21—C21—C22 | −178.35 (16) |
C13—C17—N21—C21 | −174.38 (15) | C22—C23—N23—O2 | 3.2 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N21—H21···O4i | 0.88 | 2.03 | 2.907 (2) | 173 |
O4—H41···O1 | 0.85 | 2.07 | 2.916 (2) | 173 |
O4—H42···N11ii | 0.88 | 2.06 | 2.935 (2) | 170 |
C26—H26···O1 | 0.95 | 2.25 | 2.864 (2) | 121 |
Symmetry codes: (i) x, y−1, z; (ii) −x+1, −y+1, −z. |
N21—C21 | 1.410 (3) | N41—C41 | 1.412 (3) |
C24—N24 | 1.467 (3) | C44—N44 | 1.471 (3) |
N21—C17—C13 | 114.8 (2) | N41—C37—C33 | 114.6 (2) |
C17—N21—C21 | 127.75 (19) | C37—N41—C41 | 127.63 (19) |
C12—C13—C17—N21 | 78.1 (3) | C32—C33—C37—N41 | −71.5 (3) |
C13—C17—N21—C21 | 173.29 (19) | C33—C37—N41—C41 | −173.4 (2) |
C17—N21—C21—C22 | −179.8 (2) | C37—N41—C41—C42 | 173.6 (2) |
C25—C24—N24—O13 | −8.1 (3) | C43—C44—N44—O22 | 5.2 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
N21—H21···N31 | 0.92 | 2.08 | 2.999 (3) | 178 |
N41—H41···N11i | 0.95 | 2.14 | 3.067 (3) | 164 |
C22—H22···O11i | 0.95 | 2.58 | 3.117 (3) | 116 |
C23—H23···O11i | 0.95 | 2.37 | 3.011 (3) | 124 |
C26—H26···O11 | 0.95 | 2.25 | 2.861 (3) | 121 |
C43—H43···O21i | 0.95 | 2.57 | 3.166 (3) | 121 |
C46—H46···O21 | 0.95 | 2.27 | 2.874 (3) | 121 |
Symmetry code: (i) x−1, y, z. |
Acknowledgements
X-ray data were collected at the EPSRC X-ray Crystallographic Service, University of Southampton, England; the authors thank the staff for all their help and advice. JLW thanks CNPq and FAPERJ for financial support.
References
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Spek, A. L. (2003). J. Appl. Cryst. 36, 7–13. Web of Science CrossRef CAS IUCr Journals Google Scholar
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We report here the molecular and supramolecular structures of the three isomeric 2-chloro-N-(nitrophenyl)nicotinamides (Figs. 1–3). Of these isomers, the 3-nitrophenyl isomer, (II), crystallizes from acetone as a monohydrate, whereas the 2-nitrophenyl isomer, (I), crystallizes from the same solvent in unsolvated form. The 4-nitrophenyl isomer, (III), crystallizes from ethanol with Z' = 2 (Fig. 3).
In compounds (I) and (II), and in each of the independent molecules of (III), the central amide spacer unit is essentially planar, as demonstrated by the C—C—N—C torsional angles (Tables 1, 3 and 5). However, the torsion angles describing the conformations of the two rings relative to the spacer unit show some variations, particularly for the heteroaryl rings. The nitroaryl rings do not deviate significantly from the plane of the amide spacer unit, and in each molecule there is a short intramolecular C—H···O contact involving atom C26 in the aryl ring [C46 in molecule 2 of compound (III)] and the amide O atom (Tables 2, 4 and 6), which may have some influence of this conformation. The planes of the nitro groups are all close to the planes of the adjacent aryl rings. The two independent molecules in (III) adopt very similar conformations so that for the selected asymmetric unit the two molecules are nearly enantiomeric (Table 5 and Fig. 3).
Within the spacer units, the backbone C—C—N angles are consistently significantly less than 120°, while the C—N—C angles are significantly greater than 120°. There is no evidence from the bond length in the nitroaniline fragments in compounds (I) and (III) for any bond fixation, such as is typically found in simple 2-nitro- and 4-nitroanilines. Thus polarization of types (Ia) and (IIIa) cannot effectively compete with the normal polarization of the amide units in these compounds.
The molecules of (I) are linked into a chain of edge-fused rings by two C—H···O hydrogen bonds, involving both the carbonyl O and one of the nitro O atoms (Table 2). Atom C14 of the heteroaryl ring in the molecule at (x, y, z) acts as a hydrogen-bond donor to nitro atom O2 in the molecule at (−1 + x, y, z), so generating by translation a C(9) chain (Bernstein et al., 1995) running parallel to the [100] direction. At the same time, aryl atom C25 in the molecule at (x, y, z) acts as a donor to carbonyl atom O1 in the molecule at (−x, 1 − y, 1 − z), so forming a centrosymmetric R22(14) ring centred at (0,1/2, 1/2). The combination of these two motifs then generates a chain of centrosymmetric edge-fused rings along [100], with R22(14) rings centred at (n,1/2, 1/2) (n = zero or integer) and R44(24) rings centred at (n + 1/2, 1/2, 1/2) (n = zero or integer) (Fig. 4). Two chains of this type pass through each unit cell, along the lines (x, 0, 0) and (x,1/2, 1/2), but there are no direction-specific interactions between adjacent chains.
The independent components in (II) are linked by a combination of O—H···O, O—H···N and N—H···O hydrogen bonds (Table 4) into a chain of edge-fused rings. Water atom O41 acts as a hydrogen-bond donor, via H41, to carbonyl atom O1 within the asymmetric unit. In addition, amine atom N21 at (x, y, z) acts as a hydrogen-bond donor to water atom O4 at (x, −1 + y, z), so generating by translation a C22(6) chain running parallel to the [010] direction, in which O—H···O hydrogen bonds alternate with N—H···O hydrogen bonds (Fig. 5). Two chains of this type, antiparallel to one another, pass through each unit cell, and these are linked by the O—H···N hydrogen bonds. Water atom O41 at (x, y, z) also acts as hydrogen-bond donor, this time via H42, to ring atom N11 at (1 − x, 1 − y, −z), so generating a centrosymmetric R44(16) ring, centred at (1/2, 1/2, 0) (Fig. 5). The combination of these two motifs then generates a chain of centrosymmetric edge-fused rings along the line (1/2, y, 0), in which R44(16) rings containing O—H···O and O—H···N hydrogen bonds and centred at (1/2, n + 1/2, 0) (n = zero or integer) alternate with R44(16) rings containing N—H···O and O—H···N hydrogen bonds and centred at (1/2, n, 0) (n = zero or integer) (Fig. 5).
The hydrogen-bonded chains in compound (II) are linked by three distinct aromatic π–π stacking interactions, all of them centrosymmetric but some of them fairly weak, into a continuous three-dimensional array. The heteroaryl ring in the molecule at (x, y, z) is parallel to the corresponding ring in the molecule at (−x, 1 − y, −z), which itself forms part of the hydrogen-bonded chain along (−0.5, y, 0); the interplanar spacing is 3.546 (2) Å, with a ring-centroid separation of 3.795 (2) Å, corresponding to a ring offset of 1.352 (2) Å. This interaction thus links the [010] chains into (001) sheets. In a similar fashion, the aryl rings of the molecules at (x, y, z) and (1 − x, −y, 1 − z), where the latter forms part of the hydrogen-bonded chain along (1/2, y, 1), are also parallel, with an interplanar spacing of 3.707 (2) Å, a ring-centroid separation of 3.917 (2) Å and a ring offset of 1.264 (2) Å. Finally, the aryl rings of the molecules at (x, y, z) and (−x, −y, 1 − z), which forms part of the hydrogen-bonded chain along (−0.5, y, 1), are also parallel, with an interplanar spacing of 3.384 (2) Å, a ring-centroid separation of 3.793 (2) Å and a ring offset of 1.715 (2) Å. These latter interactions connect the (001) sheets, so linking all of the hydrogen-bonded chains into a continuous framework.
The two independent molecules in (III) are linked into simple chains by two N—H···N hydrogen bonds (Table 6). Amide atom N21 acts as a hydrogen-bond donor to ring atom N31 within the asymmetric unit; similarly, amide atom N41 at (x, y, z) acts as a donor to ring atom N11 at (−1 + x, y, z), so generating by translation a C22(12) chain running parallel to the [100] direction (Fig. 6). There are number of short C—H···O contacts within this chain (Table 6), although it is doubtful if any of them could be regarded as a hydrogen bond; it is likely that these contacts are simply adventitious consequences of the N—H···N hydrogen bonds. Two C22(12) chains, antiparallel to one another, pass through each unit cell, but there are no direction-specific interactions between adjacent chains.
It is thus striking that modest changes in the geometric position of a single substituent are associated with significant changes in crystallization characteristics, in the direction-specific intermolecular interactions manifested, and hence in the overall supramolecular structures; none of these changes is readily predictable.