metal-organic compounds
Chloro(diethylenetriamine)copper(II) chloride: a disordered quasi-one-dimensional structure
aSchool of Chemistry, Faraday Building, Sackville Street, University of Manchester, Manchester M60 1QD, England
*Correspondence e-mail: robin.pritchard@manchester.ac.uk
The title structure, [CuCl(C4H13N3)]Cl, consists of alternating [CuCl(dien)]+ (dien is diethylenetriamine) and Cl− ions arranged in quasi-one-dimensional stacks along the crystallographic a axis and forming tetragonally elongated octahedral coordination shells around each Cu atom [equatorial Cu—Cl = 2.2552 (8) Å, and axial Cu—Cl = 2.831 (1) and 3.341 (1) Å]. Crystallographic mirror planes bisect each stack vertically through the Cu, Cl and central N atoms, and horizontally through the [CuCl(dien)]+ cation. The horizontal mirrors lead to each atom in the puckered [CuCl(dien)]+ cations being disordered over two crystallographically equivalent sites. Comparison of the title structure with its Br and I analogues shows a growing influence of hydrogen bonding relative to coordination bonds on traversing the series I < Br < Cl.
Comment
The title structure, (I), is a member of an approximately isostructural series, the other members being [CuBr(dien)]Br (Boeyens et al., 1991) and the polymeric polymorph of [CuI2(dien)]n (Hodgson et al., 1991). The bromide and iodide crystal structures are almost identical, despite the bromide being described as ionic and the iodide as molecular. Both compounds crystallize in the orthorhombic Pmn21 [Br: a = 8.716 (1), b = 8.588 (1) and c = 6.337 (1) Å; I: a = 8.873 (2), b = 8.890 (3) and c = 6.658 (1) Å]. In both cases, alternating [CuX(dien)] and capping X form quasi-one-dimensional stacks along c, which are bisected vertically by crystallographic mirror planes through the Cu, X and central N atoms. In contrast, the Cl analogue crystallizes in orthorhombic Pmmn, with a = 6.0925 (4), b = 8.6440 (4) and c = 8.3575 (4) Å. However, resolution of the disorder clearly shows a chemically sensible P21mn system (Fig. 1), isomorphous with the Br and I analogues, with an added mirror plane associated with the disordered [CuCl(dien)]+ group. The Cu⋯Cu separation along the stack corresponds to the shortest lattice repeat and, along with the geometry around the bridging halide, shows a steady progression from I to Cl (Table 3).
The increasing asymmetry of the two capping Cu⋯X distances arises because an N—H⋯X hydrogen bond (Fig. 1 and Table 2) replaces one of the direct Cu⋯X interactions. Accompanying these changes, the flattened five-membered rings of the iodide relax to a more typical puckered envelope shape in the Br and Cl structures. This ring conformation, in which the CH2 adjacent to NH represents the flap of the envelope, is also the norm for the dimeric cations [CuCl(dien)]22+ (Draper et al., 2004; Urtiaga et al., 1996; Utz et al., 2003) and is even retained when additional capping ligands interact with the Cu atoms, e.g. H2O (Willett, 2001; Zhu et al., 2003) and ClO4− in the Br analogue (Towle et al., 1985). Ironically, this is also the conformation seen in the monomeric polymorph of CuI2(dien) (Hodgson et al., 1991)
The nature of the disorder is not clear from the current work. Weak interstitial reflections suggest that the determination may well be a + system the capping halide approaches the Cu atom. It is therefore possible to envisage the capping halide hopping from Cu to Cu with minimal conformational disturbance, so that at least part of the disorder may be dynamic.
However, attempts at working with larger and lower-symmetry unit cells did not reduce the disorder, and neither did refining the crystals as pseudo-tetragonal twins. It is also unclear whether the disorder is static or dynamic. The asymmetry introduced by the Cu⋯Cl and N—H⋯Cl interactions suggests a static system. However, it is worth noting that the direction of the central NH bond does not, in the case of the above dimeric cations, dictate on which side of the [CuCl(dien)]Experimental
Crystals suitable for crystallographic study were prepared by mixing equal volumes of 0.02 M methanol solutions of CuCl2 and dien. The resulting solution was then subjected to vapour diffusion using diethyl ether as the anti-solvent.
Crystal data
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Refinement
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The final Pmmn, which resulted in each atom of the [CuCl(dien)]+ cation semi-occupying two sites on either side of the bc mirror plane. Decisions regarding which atoms constituted a molecular fragment were made by selecting a combination that generated bond lengths and angles which matched those in similar previously published structures. Also, H atoms were subjected to DFIX rather than AFIX constraints, so that angles involving H atoms could also be used to avoid incorrect assignments. Although dihedral angles did not form part of the above selection process, their final values showed excellent agreement with those in similar structures.
was carried out in theData collection: KappaCCD Server Software (Nonius, 1997) and COLLECT (Nonius, 1998); cell SCALEPACK (Otwinowski & Minor, 1997); data reduction: SCALEPACK and DENZO (Otwinowski & Minor, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
10.1107/S0108270106034305/sq3036sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S0108270106034305/sq3036Isup2.hkl
Crystals suitable for crystallographic study were prepared by mixing equal volumes of 0.02 M methanolic solutions of CuCl2 and dien. This solution was then subjected to vapour diffusion using diethyl ether as the anti-solvent.
The final
was carried out in Pmmn, which resulted in each atom in the [CuCl(dien)]+ cation semi-occupying two sites on either side of the bc mirror plane. Decisions regarding which atoms constituted a molecular fragment were made by selecting a combination that generated bond lengths and angles which matched those in similar previously published structures. Also, H atoms were subjected to DFIX rather than AFIX constraints, so that angles involving H atoms could also be used to avoid incorrect assignments. Although dihedral angles did not form part of the above selection process, their final values showed excellent agreement with those in similar structures.Data collection: KappaCCD Server Software (Nonius, 1997) and COLLECT (Nonius, 1998); cell
HKL SCALEPACK; data reduction: HKL DENZO and SCALEPACK (Otwinowski & Minor, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).Fig. 1. A view of the [CuCl(dien)]Cl stack in (I), with 50% probability displacement ellipsoids. H atoms are shown as small spheres of arbitrary radii. |
[CuCl(C4H13N3)]Cl | F(000) = 242 |
Mr = 237.61 | Dx = 1.793 Mg m−3 |
Orthorhombic, Pmmn | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ab 2a | Cell parameters from 1086 reflections |
a = 6.0925 (4) Å | θ = 1–27.5° |
b = 8.6440 (4) Å | µ = 3.02 mm−1 |
c = 8.3575 (4) Å | T = 133 K |
V = 440.14 (4) Å3 | Plate, blue |
Z = 2 | 0.25 × 0.25 × 0.05 mm |
Nonius KappaCCD area-detector diffractometer | 576 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.023 |
CCD scans | θmax = 27.5°, θmin = 4.1° |
Absorption correction: multi-scan (SORTAV; Blessing, 1995, 1997) | h = 0→7 |
Tmin = 0.519, Tmax = 0.864 | k = 0→11 |
1086 measured reflections | l = 0→10 |
579 independent reflections |
Refinement on F2 | All H-atom parameters refined |
Least-squares matrix: full | w = 1/[σ2(Fo2) + (0.0416P)2 + 0.2888P] where P = (Fo2 + 2Fc2)/3 |
R[F2 > 2σ(F2)] = 0.03 | (Δ/σ)max < 0.001 |
wR(F2) = 0.080 | Δρmax = 0.47 e Å−3 |
S = 1.21 | Δρmin = −0.28 e Å−3 |
579 reflections | Extinction correction: SHELXL97 (Sheldrick, 1997), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
77 parameters | Extinction coefficient: 0.045 (5) |
19 restraints |
[CuCl(C4H13N3)]Cl | V = 440.14 (4) Å3 |
Mr = 237.61 | Z = 2 |
Orthorhombic, Pmmn | Mo Kα radiation |
a = 6.0925 (4) Å | µ = 3.02 mm−1 |
b = 8.6440 (4) Å | T = 133 K |
c = 8.3575 (4) Å | 0.25 × 0.25 × 0.05 mm |
Nonius KappaCCD area-detector diffractometer | 579 independent reflections |
Absorption correction: multi-scan (SORTAV; Blessing, 1995, 1997) | 576 reflections with I > 2σ(I) |
Tmin = 0.519, Tmax = 0.864 | Rint = 0.023 |
1086 measured reflections |
R[F2 > 2σ(F2)] = 0.03 | 19 restraints |
wR(F2) = 0.080 | All H-atom parameters refined |
S = 1.21 | Δρmax = 0.47 e Å−3 |
579 reflections | Δρmin = −0.28 e Å−3 |
77 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
C1 | 0.2941 (4) | 0.1060 (3) | 0.0908 (3) | 0.0264 (8) | 0.5 |
C2 | 0.2262 (6) | −0.0237 (3) | 0.2038 (3) | 0.0335 (7) | 0.5 |
N1 | 0.2147 (4) | 0.25 | 0.1611 (3) | 0.0216 (8) | 0.5 |
N2 | 0.3107 (4) | 0.0190 (3) | 0.3651 (3) | 0.0311 (6) | 0.5 |
Cl1 | 0.2759 (2) | 0.25 | 0.66488 (9) | 0.0367 (3) | 0.5 |
Cl2 | 0.75 | 0.25 | 0.33658 (8) | 0.02624 (14) | |
Cu1 | 0.29242 (8) | 0.25 | 0.39530 (4) | 0.02485 (18) | 0.5 |
H1A | 0.25 | 0.089 (3) | −0.014 (2) | 0.024 (6)* | |
H1B | 0.448 (3) | 0.110 (5) | 0.077 (4) | 0.032 (9)* | 0.5 |
H1C | 0.079 (4) | 0.25 | 0.161 (9) | 0.08 (2)* | 0.5 |
H2A | 0.25 | −0.123 (3) | 0.163 (4) | 0.052 (8)* | |
H2B | 0.070 (4) | −0.027 (5) | 0.202 (5) | 0.044 (10)* | 0.5 |
H2C | 0.444 (4) | −0.012 (5) | 0.370 (4) | 0.047 (12)* | 0.5 |
H2D | 0.25 | −0.028 (3) | 0.439 (3) | 0.044 (8)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.025 (2) | 0.0267 (10) | 0.0271 (10) | −0.0025 (9) | −0.0021 (8) | −0.0074 (8) |
C2 | 0.0288 (16) | 0.0231 (9) | 0.0487 (12) | −0.0016 (13) | 0.0004 (14) | −0.0082 (9) |
N1 | 0.014 (2) | 0.0252 (11) | 0.0251 (11) | 0 | 0.0012 (10) | 0 |
N2 | 0.0375 (15) | 0.0210 (9) | 0.0348 (10) | −0.0018 (8) | 0.0076 (8) | 0.0090 (9) |
Cl1 | 0.0338 (7) | 0.0583 (5) | 0.0181 (3) | 0 | 0.0031 (4) | 0 |
Cl2 | 0.0229 (2) | 0.0244 (3) | 0.0314 (3) | 0 | 0 | 0 |
Cu1 | 0.0367 (5) | 0.01915 (17) | 0.01874 (18) | 0 | 0.00409 (15) | 0 |
C1—N1 | 1.459 (3) | N1—Cu1 | 2.014 (3) |
C1—C2 | 1.523 (4) | N1—H1C | 0.83 (2) |
C1—H1A | 0.926 (17) | N2—Cu1 | 2.016 (2) |
C1—H1B | 0.95 (2) | N2—H2C | 0.85 (2) |
C2—N2 | 1.489 (4) | N2—H2D | 0.83 (2) |
C2—H2A | 0.93 (2) | Cl1—Cu1 | 2.2552 (8) |
C2—H2B | 0.95 (2) | ||
N1—C1—C2 | 106.75 (19) | C1—N1—H1C | 109 (2) |
N1—C1—H1A | 114.8 (13) | C1i—N1—H1C | 109 (2) |
C2—C1—H1A | 112.9 (14) | Cu1—N1—H1C | 103 (5) |
N1—C1—H1B | 110 (2) | C2—N2—Cu1 | 109.86 (16) |
C2—C1—H1B | 112 (2) | C2—N2—H2C | 107 (2) |
H1A—C1—H1B | 101 (2) | Cu1—N2—H2C | 111 (3) |
N2—C2—C1 | 106.6 (2) | C2—N2—H2D | 113.7 (16) |
N2—C2—H2A | 120.5 (17) | Cu1—N2—H2D | 111 (2) |
C1—C2—H2A | 113.8 (18) | H2C—N2—H2D | 104 (3) |
N2—C2—H2B | 112 (2) | N1—Cu1—N2 | 83.76 (7) |
C1—C2—H2B | 107 (3) | N2—Cu1—N2i | 164.26 (13) |
H2A—C2—H2B | 97 (3) | N2i—Cu1—N2ii | 159.98 (10) |
C1—N1—C1i | 117.1 (3) | N2—Cu1—N2iii | 159.98 (10) |
C1—N1—Cu1 | 108.27 (14) | N1—Cu1—Cl1 | 163.84 (8) |
C1i—N1—Cu1 | 108.27 (14) | N2—Cu1—Cl1 | 97.33 (7) |
Cu1—N2—C2—C1 | 35.6 (3) | C1—N1—Cu1—N2 | −21.3 (2) |
N2—C2—C1—N1 | −53.7 (3) | N1—Cu1—N2—C2 | −8.8 (2) |
C2—C1—N1—Cu1 | 46.2 (2) |
Symmetry codes: (i) x, −y+1/2, z; (ii) −x+1/2, y, z; (iii) −x+1/2, −y+1/2, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1C···Cl2iv | 0.83 (2) | 2.48 (5) | 3.188 (3) | 144 (7) |
N2—H2C···Cl1v | 0.85 (2) | 2.69 (3) | 3.437 (2) | 147 (4) |
N2—H2D···Cl2v | 0.83 (2) | 2.68 (2) | 3.429 (2) | 151 (1) |
Symmetry codes: (iv) x−1, y, z; (v) −x+1, −y, −z+1. |
Experimental details
Crystal data | |
Chemical formula | [CuCl(C4H13N3)]Cl |
Mr | 237.61 |
Crystal system, space group | Orthorhombic, Pmmn |
Temperature (K) | 133 |
a, b, c (Å) | 6.0925 (4), 8.6440 (4), 8.3575 (4) |
V (Å3) | 440.14 (4) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 3.02 |
Crystal size (mm) | 0.25 × 0.25 × 0.05 |
Data collection | |
Diffractometer | Nonius KappaCCD area-detector diffractometer |
Absorption correction | Multi-scan (SORTAV; Blessing, 1995, 1997) |
Tmin, Tmax | 0.519, 0.864 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 1086, 579, 576 |
Rint | 0.023 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.03, 0.080, 1.21 |
No. of reflections | 579 |
No. of parameters | 77 |
No. of restraints | 19 |
H-atom treatment | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 0.47, −0.28 |
Computer programs: KappaCCD Server Software (Nonius, 1997) and COLLECT (Nonius, 1998), HKL SCALEPACK, HKL DENZO and SCALEPACK (Otwinowski & Minor, 1997), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999).
C1—N1 | 1.459 (3) | N1—Cu1 | 2.014 (3) |
C1—C2 | 1.523 (4) | N2—Cu1 | 2.016 (2) |
C2—N2 | 1.489 (4) | Cl1—Cu1 | 2.2552 (8) |
N1—C1—C2 | 106.75 (19) | C2—N2—Cu1 | 109.86 (16) |
N2—C2—C1 | 106.6 (2) | N1—Cu1—N2 | 83.76 (7) |
C1—N1—Cu1 | 108.27 (14) | ||
Cu1—N2—C2—C1 | 35.6 (3) | C1—N1—Cu1—N2 | −21.3 (2) |
N2—C2—C1—N1 | −53.7 (3) | N1—Cu1—N2—C2 | −8.8 (2) |
C2—C1—N1—Cu1 | 46.2 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1C···Cl2i | 0.83 (2) | 2.48 (5) | 3.188 (3) | 144 (7) |
N2—H2C···Cl1ii | 0.85 (2) | 2.69 (3) | 3.437 (2) | 147 (4) |
N2—H2D···Cl2ii | 0.83 (2) | 2.68 (2) | 3.429 (2) | 150.8 (14) |
Symmetry codes: (i) x−1, y, z; (ii) −x+1, −y, −z+1. |
X | Cu···X | Cu···X | Cu···Cu | Cu···X···Cu |
I | 3.328 | 3.368 | 6.658 | 167.7 |
Br | 3.139 | 3.298 | 6.377 | 164.3 |
Cl | 2.831 | 3.341 | 6.092 | 161.6 |
Acknowledgements
The authors acknowledge the use of the EPSRC Chemical Database Service at Daresbury (Fletcher et al., 1996). We also acknowledge EPSRC support for the purchase of equipment.
References
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The title structure, (I), is a member of an approximately isostructural series, the other members being [CuBr(dien)]Br (Boeyens et al., 1991) and the polymeric polymorph of [CuI2(dien)]n (Hodgson et al., 1991). The bromide and iodide crystal structures are almost identical, despite the bromide being described as ionic and the iodide as molecular. Both compounds crystallize in orthorhombic space group Pmn21 [Br: a = 8.716 (1), b = 8.588 (1) and c = 6.337 (1) Å; I: a = 8.873 (2), b = 8.890 (3) and c = 6.658 (1) Å]. In both cases, alternating [CuX(dien)] and capping X form quasi-one-dimensional stacks along c, which are bisected vertically by crystallographic mirror planes through the Cu, X and central N atoms. In contrast, the Cl analogue crystallizes in orthorhombic space group Pmmn, with a = 6.0925 (4), b = 8.6440 (4) and c = 8.3575 (4) Å. However, resolution of the disorder clearly shows a chemically sensible P21mn system (Fig. 1), isomorphous with the Br and I analogues, with an added mirror plane associated with the disordered [CuCl(dien)]+ group. The Cu···Cu separation along the stack corresponds to the shortest lattice repeat and, along with the geometry around the bridging halide, shows a steady progression from I to Cl (Table 3).
The increasing asymmetry of the two capping Cu···X distances arises because an N—H···X hydrogen bond (Fig 1, Table 2) replaces one of the direct Cu···X interactions. Accompanying these changes, the flattened five-membered rings of the iodide relax to a more typical puckered envelope shape in the Br and Cl structures. This ring conformation, in which the CH2 adjacent to NH represents the flap of the envelope, is also the norm for the dimeric cations [CuCl(dien)]22+ (Draper et al., 2004; Urtiga et al., 1996; Utz et al., 2003) and is even retained when additional capping ligands interact with the Cu atoms, e.g. H2O (Willett, 2001; Zhu et al., 2003) and ClO4− in the Br analogue (Towle et al., 1985). Ironically, this is also the conformation seen in the monomeric polymorph of CuI2(dien) (Hodgson et al., 1991)
The nature of the disorder is not clear from the current work. Weak interstitial reflections suggest that the determination may well be a subcell. However, attempts at working with larger and lower-symmetry unit cells did not reduce the disorder, and neither did refining the crystals as pseudo-tetragonal twins. It is also unclear whether the disorder is static or dynamic. The asymmetry introduced by the Cu···Cl and N—H···Cl interactions suggests a static system. However, it is worth noting that the direction of the central NH bond does not, in the case of the above dimeric cations, dictate on which side of the [CuCl(dien)]+ system the capping halide approaches the Cu atom. It is therefore possible to envisage the capping halide hopping from Cu to Cu with minimal conformational disturbance, so that at least part of the disorder may be dynamic.