metal-organic compounds
Effects of d-orbital occupancy on the geometry of the trigonal–bipyramidal complexes [MIICl3(Hdabco)(dabco)]n, where M is Mn, Co, Ni or Cu and dabco is 1,4-diazabicyclo[2.2.2]octane
aSchool of Chemistry, Faraday Building, Sackville Street, University of Manchester, Manchester M60 1QD, England
*Correspondence e-mail: robin.pritchard@manchester.ac.uk
Geometric data from (1-aza-4-azoniabicyclo[2.2.2]octane-κN1)(1,4-diazabicyclo[2.2.2]octane-κN1)trichloromanganese(II), [MnCl3(C6H13N2)(C6H12N2)] or [MnCl3(Hdabco)(dabco)] (dabco is 1,4-diazabicyclo[2.2.2]octane), and the cobalt(II) analogue, [CoCl3(C6H13N2)(C6H12N2)], have been combined with previously reported data for the Ni and Cu analogues to show that bond-length trends across the isotypal series are consistent with a high-spin trigonal–bipyramidal system. As each transition metal is positioned on a D3 site in the R32 (No. 155), two bond lengths fully define each trigonal–bipyramidal coordination geometry [Mn—Cl = 2.3903 (7) Å and Mn—N = 2.367 (2) Å, and Co—Cl = 2.3080 (8) Å and Co—N = 2.269 (3) Å].
Comment
Comparison of bond lengths in transition metal compounds shows that imperfect shielding of metal nuclei by d electrons leads to a general contraction across a series. This trend is reversed at points where d orbitals that coincide with bonds are occupied. The above effects were noted for octahedral metal oxides by van Santen & van Wieringen (1952) and demonstrated more recently for a series of octahedral complexes by Cotton et al. (1984, 1993). The latter compounds also show evidence of Jahn–Teller distortion. Chemists usually describe the above effects in terms of crystal- or ligand-field theories, which attempt to quantify the energy cost of placing an electron in a bonding d orbital (e.g. for an octahedral complex, the d orbitals divide into high-energy dx2-y2 and dx2, directed along the bonds, and lower-energy dxy, dxz and dyz, projecting between the bonds). Importantly, the energy gap between the two sets of orbitals determines whether it is energetically favourable to pair electrons in the lowest-energy orbitals or to semi-fill all five d orbitals before starting to pair electrons (i.e. low-spin versus high-spin configurations).
The same rationale can be used for analysing the title trigonal–bipyramidal (tbp) structures, [MIICl3(Hdabco)(dabco)n, where M is Mn, Co, Ni or Cu and dabco is 1,4-diazabicyclo[2.2.2]octane. The Mn and Co structures, (I) and (II), from the current study (Fig. 1) form an isotypal series with the previously reported Ni (Petrusenko et al., 1997) and Cu analogues (Karan et al., 1999; Viossat et al., 1988). In the tbp geometry, the five d orbitals divide into three subsets, viz. low-energy dxz and dyz, medium-energy dxy and dx2-y2, lying in the same plane as the three equatorial M—Cl bonds, and high-energy dz2, pointing directly along the axial M—N bonds. When the crystallographically determined M—Cl and M—N bond lengths are plotted against d-electron configuration (Fig. 2), the curves diverge at NiII. This is as expected for a high-spin tbp system. All bonds contract as electrons fill non-bonding dxz and dyz orbitals in the d5 to d7 configurations, but occupation of equatorial dxy and dx2-y2 in d8 and d9 causes the M—Cl bonds to lengthen, whilst allowing the M—N bonds to continue contracting. The M—N bonds would not be expected to expand until all five d orbitals are fully occupied. Support for the high-spin assignment is obtained from the tbp compounds [MIICl3(dabcoH)2] (M = Mn, Fe, Ni and Cu), which were previously classified as high-spin based on spectroscopic studies (Vallarino et al., 1972).
It is likely that Jahn–Teller distortion of the Ni—Cl bonds has been masked by the crystallographic threefold axis. Previous structural studies of [MIICl3(CH3dabco)2]ClO4 (M = Ni and Cu; Rozell & Wood 1977), where all the bonds are crystallographically independent, showed a small but significant deformation in the d8 Ni complex. The dabco dimensions in the title Mn and Co structures show good agreement and are as expected (Tables 1 and 2). Interestingly, the M—N bonds are aligned with the crystal c axis in the current structures so that variations in unit-cell dimensions mirror changes in bond lengths. This suggests that spectroscopic excitation of d electrons may well have a macroscopic effect and that these materials should be investigated for opto-mechanical uses.
Experimental
Crystals of the title Mn and Co compounds were prepared by mixing equal volumes of 0.2 M methanol solutions of dabco and MCl2. Long needles, suitable for crystallographic investigation, formed when these solutions were subjected to vapour diffusion using diethyl ether as the anti-solvent.
Compound (I)
Crystal data
|
Data collection
Refinement
|
Compound (II)
Crystal data
|
Refinement
|
Final refinements of both structures were carried out in the R32 (No. 155) with all non-H atoms anisotropic and H atoms isotropic, except for amine atom H4, whose Uiso(H) value was fixed at 0.028 (Mn) or 0.025 Å2 (Co) due to the close proximity of a disordered symmetry-related position. In this a disordered amine H atom semi-populates two sites on the threefold axis between adjacent N atoms. As previous refinements of the Cu analogue were carried out in both R32 and R3 (No. 146), which gave an improved description of the amine H atom, refinements of the current structures were also attempted in R3. However, as the amine H atoms remained disordered, the R3 refinements were discontinued. The choice of made negligible difference to the M—Cl and M—N bond lengths.
For both compounds, data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994); cell CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995); program(s) used to solve structure: SHELXS86 (Sheldrick, 1985) for (I) and SHELXS97 (Sheldrick, 1997) for (II); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
10.1107/S0108270106037504/bc3016sup1.cif
contains datablocks global, I, II. DOI:Structure factors: contains datablock I. DOI: 10.1107/S0108270106037504/bc3016Isup2.hkl
Structure factors: contains datablock II. DOI: 10.1107/S0108270106037504/bc3016IIsup3.hkl
Crystals of the title Mn and Co compounds were prepared by mixing equal volumes of 0.02 M methanol solutions of dabco and MCl2. Long needles, suitable for crystallographic investigation, formed when these solutions were subjected to vapour diffusion using diethyl ether as the anti-solvent.
Final refinements of both structures were carried out in
R32 (No. 155) with all non-H atoms anisotropic and H atoms isotropic, except for atom H4, whose Uiso(H) value was fixed at 0.028 Å2 (Mn) or 0.025 Å2 (Co) due to the close proximity of a disordered, symmetry-related ghost. In this a disordered amine H atom semi-populates two sites on the threefold axis between adjacent N atoms. As previous refinements of the Cu analogue were carried out in both R32 and R3 (No. 146), which gave an improved description of the amine H atom, refinements of the current structures were also attempted in R3. However, as the amine H atoms remained disordered, the R3 refinements were discontinued. The choice of made negligible difference to the M—Cl and M—N bond lengths.For both compounds, data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994); cell
CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995). Program(s) used to solve structure: SHELXS86 (Sheldrick, 1986) for (I); SHELXS97 (Sheldrick, 1997) for (II). For both compounds, program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).[MnCl3(C6H13N2)(C6H12N2)] | Dx = 1.585 Mg m−3 |
Mr = 386.65 | Mo Kα radiation, λ = 0.71073 Å |
Hexagonal, R32 | Cell parameters from 25 reflections |
Hall symbol: R 3 2" | θ = 12.6–15.4° |
a = 10.601 (2) Å | µ = 1.31 mm−1 |
c = 12.484 (2) Å | T = 223 K |
V = 1215.0 (4) Å3 | Needle, colourless |
Z = 3 | 0.3 × 0.1 × 0.1 mm |
F(000) = 603 |
Enraf–Nonius CAD-4 diffractometer | Rint = 0.019 |
non–profiled ω/2θ scans | θmax = 25.0°, θmin = 3.8° |
Absorption correction: ψ scan North et al., 1968 | h = −12→10 |
Tmin = 0.696, Tmax = 0.881 | k = 0→12 |
1514 measured reflections | l = −14→14 |
487 independent reflections | 3 standard reflections every 60 min |
480 reflections with I > 2σ(I) | intensity decay: 2% |
Refinement on F2 | w = 1/[σ2(Fo2) + (0.0248P)2] where P = (Fo2 + 2Fc2)/3 |
Least-squares matrix: full | (Δ/σ)max = 0.001 |
R[F2 > 2σ(F2)] = 0.015 | Δρmax = 0.16 e Å−3 |
wR(F2) = 0.037 | Δρmin = −0.13 e Å−3 |
S = 1.07 | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
487 reflections | Extinction coefficient: 0.0011 (4) |
50 parameters | Absolute structure: Flack (1983), 201 Friedel pairs |
0 restraints | Absolute structure parameter: 0.01 (2) |
H atoms treated by a mixture of independent and constrained refinement |
[MnCl3(C6H13N2)(C6H12N2)] | Z = 3 |
Mr = 386.65 | Mo Kα radiation |
Hexagonal, R32 | µ = 1.31 mm−1 |
a = 10.601 (2) Å | T = 223 K |
c = 12.484 (2) Å | 0.3 × 0.1 × 0.1 mm |
V = 1215.0 (4) Å3 |
Enraf–Nonius CAD-4 diffractometer | 480 reflections with I > 2σ(I) |
Absorption correction: ψ scan North et al., 1968 | Rint = 0.019 |
Tmin = 0.696, Tmax = 0.881 | 3 standard reflections every 60 min |
1514 measured reflections | intensity decay: 2% |
487 independent reflections |
R[F2 > 2σ(F2)] = 0.015 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.037 | Δρmax = 0.16 e Å−3 |
S = 1.07 | Δρmin = −0.13 e Å−3 |
487 reflections | Absolute structure: Flack (1983), 201 Friedel pairs |
50 parameters | Absolute structure parameter: 0.01 (2) |
0 restraints |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Mn1 | 1 | 1 | 0 | 0.01470 (17) | |
Cl1 | 0.77452 (5) | 1 | 0 | 0.02454 (18) | |
N1 | 1 | 1 | 0.18956 (16) | 0.0168 (4) | |
C2 | 0.86318 (18) | 0.8784 (2) | 0.23120 (13) | 0.0229 (4) | |
C3 | 0.85547 (15) | 0.88817 (17) | 0.35364 (13) | 0.0198 (4) | |
N4 | 1 | 1 | 0.39414 (15) | 0.0173 (4) | |
H2A | 0.784 (2) | 0.874 (2) | 0.198 (2) | 0.042 (5)* | |
H2B | 0.861 (2) | 0.793 (2) | 0.2143 (16) | 0.033 (5)* | |
H3A | 0.7894 (18) | 0.9161 (15) | 0.3741 (12) | 0.015 (4)* | |
H3B | 0.8348 (17) | 0.800 (2) | 0.3875 (13) | 0.021 (4)* | |
H4 | 1 | 1 | 0.482 (6) | 0.028* | 0.5 |
U11 | U22 | U33 | U12 | U13 | U23 | |
Mn1 | 0.0160 (2) | 0.0160 (2) | 0.0122 (3) | 0.00798 (11) | 0 | 0 |
Cl1 | 0.0219 (2) | 0.0362 (3) | 0.0203 (3) | 0.01812 (17) | 0.00005 (10) | 0.0001 (2) |
N1 | 0.0184 (6) | 0.0184 (6) | 0.0136 (9) | 0.0092 (3) | 0 | 0 |
C2 | 0.0205 (8) | 0.0234 (8) | 0.0152 (8) | 0.0037 (7) | −0.0008 (6) | 0.0007 (6) |
C3 | 0.0199 (9) | 0.0216 (8) | 0.0154 (7) | 0.0086 (7) | 0.0018 (6) | 0.0017 (5) |
N4 | 0.0192 (7) | 0.0192 (7) | 0.0137 (11) | 0.0096 (3) | 0 | 0 |
Mn1—N1i | 2.367 (2) | C2—H2A | 0.91 (2) |
Mn1—N1 | 2.367 (2) | C2—H2B | 0.92 (2) |
Mn1—Cl1ii | 2.3903 (7) | C3—N4 | 1.4806 (16) |
Mn1—Cl1 | 2.3903 (7) | C3—H3A | 0.923 (18) |
Mn1—Cl1iii | 2.3903 (7) | C3—H3B | 0.95 (2) |
N1—C2ii | 1.4717 (18) | N4—C3ii | 1.4806 (16) |
N1—C2 | 1.4717 (18) | N4—C3iii | 1.4806 (16) |
N1—C2iii | 1.4717 (18) | N4—H4 | 1.09 (7) |
C2—C3 | 1.537 (2) | ||
N1i—Mn1—N1 | 180 | N1—C2—H2A | 111.2 (14) |
N1i—Mn1—Cl1ii | 90 | C3—C2—H2A | 111.9 (14) |
N1—Mn1—Cl1ii | 90 | N1—C2—H2B | 108.0 (13) |
N1i—Mn1—Cl1 | 90 | C3—C2—H2B | 108.5 (13) |
N1—Mn1—Cl1 | 90 | H2A—C2—H2B | 106.3 (17) |
Cl1ii—Mn1—Cl1 | 120 | N4—C3—C2 | 108.96 (12) |
N1i—Mn1—Cl1iii | 90 | N4—C3—H3A | 107.2 (9) |
N1—Mn1—Cl1iii | 90 | C2—C3—H3A | 111.8 (9) |
Cl1ii—Mn1—Cl1iii | 120 | N4—C3—H3B | 106.0 (10) |
Cl1—Mn1—Cl1iii | 120 | C2—C3—H3B | 111.7 (11) |
C2ii—N1—C2 | 108.23 (10) | H3A—C3—H3B | 110.9 (13) |
C2ii—N1—C2iii | 108.23 (10) | C3—N4—C3ii | 108.97 (9) |
C2—N1—C2iii | 108.23 (10) | C3—N4—C3iii | 108.97 (9) |
C2ii—N1—Mn1 | 110.68 (10) | C3ii—N4—C3iii | 108.97 (9) |
C2—N1—Mn1 | 110.68 (10) | C3—N4—H4 | 109.97 (10) |
C2iii—N1—Mn1 | 110.68 (10) | C3ii—N4—H4 | 109.97 (9) |
N1—C2—C3 | 110.77 (13) | C3iii—N4—H4 | 109.97 (9) |
Cl1ii—Mn1—N1—C2ii | 54.17 (8) | Cl1iii—Mn1—N1—C2iii | 54.17 (8) |
Cl1—Mn1—N1—C2ii | −65.83 (8) | C2ii—N1—C2—C3 | −52.13 (16) |
Cl1iii—Mn1—N1—C2ii | 174.17 (8) | C2iii—N1—C2—C3 | 64.96 (14) |
Cl1ii—Mn1—N1—C2 | 174.17 (8) | Mn1—N1—C2—C3 | −173.58 (10) |
Cl1—Mn1—N1—C2 | 54.17 (8) | N1—C2—C3—N4 | −10.99 (17) |
Cl1iii—Mn1—N1—C2 | −65.83 (8) | C2—C3—N4—C3ii | 65.67 (15) |
Cl1ii—Mn1—N1—C2iii | −65.83 (8) | C2—C3—N4—C3iii | −53.12 (15) |
Cl1—Mn1—N1—C2iii | 174.17 (8) |
Symmetry codes: (i) x−y+1, −y+2, −z; (ii) −x+y+1, −x+2, z; (iii) −y+2, x−y+1, z. |
[CoCl3(C6H13N2)(C6H12N2)] | Dx = 1.644 Mg m−3 |
Mr = 390.64 | Mo Kα radiation, λ = 0.71073 Å |
Trigonal, R32 | Cell parameters from 25 reflections |
Hall symbol: R 3 2" | θ = 6.1–9.2° |
a = 10.5409 (10) Å | µ = 1.59 mm−1 |
c = 12.303 (2) Å | T = 223 K |
V = 1183.9 (2) Å3 | Prism, blue |
Z = 3 | 0.25 × 0.1 × 0.05 mm |
F(000) = 609 |
Enraf–Nonius CAD-4 diffractometer | 457 reflections with I > 2σ(I) |
non–profiled ω/2θ scans | Rint = 0.029 |
Absorption correction: ψ scan North et al., 1968 | θmax = 25.0°, θmin = 3.9° |
Tmin = 0.692, Tmax = 0.925 | h = 0→12 |
1463 measured reflections | k = −12→10 |
470 independent reflections | l = −14→14 |
Refinement on F2 | w = 1/[σ2(Fo2) + (0.0197P)2] where P = (Fo2 + 2Fc2)/3 |
Least-squares matrix: full | (Δ/σ)max < 0.001 |
R[F2 > 2σ(F2)] = 0.020 | Δρmax = 0.15 e Å−3 |
wR(F2) = 0.041 | Δρmin = −0.16 e Å−3 |
S = 1.1 | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
470 reflections | Extinction coefficient: 0.0006 (3) |
50 parameters | Absolute structure: Flack (1983), 194 Friedel pairs |
0 restraints | Absolute structure parameter: 0.00 (2) |
H atoms treated by a mixture of independent and constrained refinement |
[CoCl3(C6H13N2)(C6H12N2)] | Z = 3 |
Mr = 390.64 | Mo Kα radiation |
Trigonal, R32 | µ = 1.59 mm−1 |
a = 10.5409 (10) Å | T = 223 K |
c = 12.303 (2) Å | 0.25 × 0.1 × 0.05 mm |
V = 1183.9 (2) Å3 |
Enraf–Nonius CAD-4 diffractometer | 470 independent reflections |
Absorption correction: ψ scan North et al., 1968 | 457 reflections with I > 2σ(I) |
Tmin = 0.692, Tmax = 0.925 | Rint = 0.029 |
1463 measured reflections |
R[F2 > 2σ(F2)] = 0.020 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.041 | Δρmax = 0.15 e Å−3 |
S = 1.1 | Δρmin = −0.16 e Å−3 |
470 reflections | Absolute structure: Flack (1983), 194 Friedel pairs |
50 parameters | Absolute structure parameter: 0.00 (2) |
0 restraints |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Co1 | 0 | 0 | 1 | 0.0158 (2) | |
Cl1 | 0.21896 (8) | 0 | 1 | 0.0238 (2) | |
N1 | 0 | 0 | 0.8155 (2) | 0.0163 (6) | |
C2 | 0.1356 (3) | 0.1238 (3) | 0.7721 (2) | 0.0235 (6) | |
C3 | 0.1450 (3) | 0.1127 (3) | 0.6488 (2) | 0.0211 (6) | |
N4 | 0 | 0 | 0.6070 (2) | 0.0168 (6) | |
H2A | 0.213 (3) | 0.126 (3) | 0.806 (2) | 0.037 (8)* | |
H2B | 0.141 (3) | 0.208 (3) | 0.789 (2) | 0.020 (7)* | |
H3A | 0.206 (3) | 0.082 (2) | 0.6304 (18) | 0.019 (7)* | |
H3B | 0.172 (2) | 0.198 (3) | 0.6132 (19) | 0.025 (6)* | |
H4 | 0 | 0 | 0.527 (6) | 0.025* | 0.5 |
U11 | U22 | U33 | U12 | U13 | U23 | |
Co1 | 0.0158 (3) | 0.0158 (3) | 0.0158 (4) | 0.00792 (15) | 0 | 0 |
Cl1 | 0.0204 (4) | 0.0356 (5) | 0.0205 (5) | 0.0178 (3) | −0.00067 (17) | −0.0013 (3) |
N1 | 0.0167 (9) | 0.0167 (9) | 0.0155 (15) | 0.0083 (4) | 0 | 0 |
C2 | 0.0217 (14) | 0.0222 (14) | 0.0185 (13) | 0.0049 (11) | −0.0019 (10) | 0.0003 (11) |
C3 | 0.0195 (16) | 0.0240 (14) | 0.0182 (11) | 0.0097 (11) | 0.0028 (10) | 0.0028 (9) |
N4 | 0.0186 (10) | 0.0186 (10) | 0.0134 (16) | 0.0093 (5) | 0 | 0 |
Co1—N1i | 2.269 (3) | C2—H2A | 0.91 (3) |
Co1—N1 | 2.269 (3) | C2—H2B | 0.89 (3) |
Co1—Cl1ii | 2.3080 (9) | C3—N4 | 1.482 (3) |
Co1—Cl1 | 2.3080 (8) | C3—H3A | 0.88 (3) |
Co1—Cl1iii | 2.3080 (8) | C3—H3B | 0.91 (3) |
N1—C2 | 1.472 (3) | N4—C3iii | 1.482 (3) |
N1—C2ii | 1.472 (3) | N4—C3ii | 1.482 (3) |
N1—C2iii | 1.472 (3) | N4—H4 | 0.98 (7) |
C2—C3 | 1.528 (3) | ||
N1i—Co1—N1 | 180 | N1—C2—H2A | 108.3 (18) |
N1i—Co1—Cl1ii | 90.0000 (10) | C3—C2—H2A | 111.7 (17) |
N1—Co1—Cl1ii | 90.0000 (10) | N1—C2—H2B | 110.7 (18) |
N1i—Co1—Cl1 | 90 | C3—C2—H2B | 109.6 (17) |
N1—Co1—Cl1 | 90 | H2A—C2—H2B | 105 (2) |
Cl1ii—Co1—Cl1 | 120 | N4—C3—C2 | 109.0 (2) |
N1i—Co1—Cl1iii | 90 | N4—C3—H3A | 105.3 (14) |
N1—Co1—Cl1iii | 90 | C2—C3—H3A | 111.8 (15) |
Cl1ii—Co1—Cl1iii | 120 | N4—C3—H3B | 108.0 (14) |
Cl1—Co1—Cl1iii | 120 | C2—C3—H3B | 113.8 (17) |
C2—N1—C2ii | 107.60 (16) | H3A—C3—H3B | 109 (2) |
C2—N1—C2iii | 107.60 (16) | C3—N4—C3iii | 108.62 (14) |
C2ii—N1—C2iii | 107.60 (16) | C3—N4—C3ii | 108.62 (14) |
C2—N1—Co1 | 111.29 (15) | C3iii—N4—C3ii | 108.62 (14) |
C2ii—N1—Co1 | 111.29 (15) | C3—N4—H4 | 110.31 (14) |
C2iii—N1—Co1 | 111.29 (15) | C3iii—N4—H4 | 110.31 (14) |
N1—C2—C3 | 111.3 (2) | C3ii—N4—H4 | 110.31 (14) |
Cl1ii—Co1—N1—C2 | −175.50 (14) | Cl1iii—Co1—N1—C2iii | −55.50 (14) |
Cl1—Co1—N1—C2 | −55.50 (14) | C2ii—N1—C2—C3 | 50.3 (3) |
Cl1iii—Co1—N1—C2 | 64.50 (14) | C2iii—N1—C2—C3 | −65.4 (2) |
Cl1ii—Co1—N1—C2ii | −55.50 (14) | Co1—N1—C2—C3 | 172.43 (17) |
Cl1—Co1—N1—C2ii | 64.50 (14) | N1—C2—C3—N4 | 13.0 (3) |
Cl1iii—Co1—N1—C2ii | −175.50 (14) | C2—C3—N4—C3iii | 51.6 (2) |
Cl1ii—Co1—N1—C2iii | 64.50 (14) | C2—C3—N4—C3ii | −66.3 (2) |
Cl1—Co1—N1—C2iii | −175.50 (14) |
Symmetry codes: (i) x−y, −y, −z+2; (ii) −x+y, −x, z; (iii) −y, x−y, z. |
Experimental details
(I) | (II) | |
Crystal data | ||
Chemical formula | [MnCl3(C6H13N2)(C6H12N2)] | [CoCl3(C6H13N2)(C6H12N2)] |
Mr | 386.65 | 390.64 |
Crystal system, space group | Hexagonal, R32 | Trigonal, R32 |
Temperature (K) | 223 | 223 |
a, b, c (Å) | 10.601 (2), 10.601 (2), 12.484 (2) | 10.5409 (10), 10.5409 (10), 12.303 (2) |
α, β, γ (°) | 90, 90, 120 | 90, 90, 120 |
V (Å3) | 1215.0 (4) | 1183.9 (2) |
Z | 3 | 3 |
Radiation type | Mo Kα | Mo Kα |
µ (mm−1) | 1.31 | 1.59 |
Crystal size (mm) | 0.3 × 0.1 × 0.1 | 0.25 × 0.1 × 0.05 |
Data collection | ||
Diffractometer | Enraf–Nonius CAD-4 diffractometer | Enraf–Nonius CAD-4 diffractometer |
Absorption correction | ψ scan North et al., 1968 | ψ scan North et al., 1968 |
Tmin, Tmax | 0.696, 0.881 | 0.692, 0.925 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 1514, 487, 480 | 1463, 470, 457 |
Rint | 0.019 | 0.029 |
(sin θ/λ)max (Å−1) | 0.594 | 0.594 |
Refinement | ||
R[F2 > 2σ(F2)], wR(F2), S | 0.015, 0.037, 1.07 | 0.020, 0.041, 1.1 |
No. of reflections | 487 | 470 |
No. of parameters | 50 | 50 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.16, −0.13 | 0.15, −0.16 |
Absolute structure | Flack (1983), 201 Friedel pairs | Flack (1983), 194 Friedel pairs |
Absolute structure parameter | 0.01 (2) | 0.00 (2) |
Computer programs: CAD-4 EXPRESS (Enraf–Nonius, 1994), CAD-4 EXPRESS, XCAD4 (Harms & Wocadlo, 1995), SHELXS86 (Sheldrick, 1986), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999).
Mn1—N1 | 2.367 (2) | C2—C3 | 1.537 (2) |
Mn1—Cl1 | 2.3903 (7) | C3—N4 | 1.4806 (16) |
N1—C2 | 1.4717 (18) | ||
C2—N1—C2i | 108.23 (10) | N4—C3—C2 | 108.96 (12) |
N1—C2—C3 | 110.77 (13) | C3—N4—C3i | 108.97 (9) |
Symmetry code: (i) −y+2, x−y+1, z. |
Co1—N1 | 2.269 (3) | C2—C3 | 1.528 (3) |
Co1—Cl1 | 2.3080 (8) | C3—N4 | 1.482 (3) |
N1—C2 | 1.472 (3) | ||
C2—N1—C2i | 107.60 (16) | N4—C3—C2 | 109.0 (2) |
N1—C2—C3 | 111.3 (2) | C3—N4—C3i | 108.62 (14) |
Symmetry code: (i) −y, x−y, z. |
Acknowledgements
The authors acknowledge the use of the EPSRC's Chemical Database Service (Fletcher et al., 1996; Allen et al., 1983) at Daresbury and EPSRC support for the purchase of equipment.
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Comparison of bond lengths in transition metal compounds shows that imperfect shielding of metal nuclei by d electrons leads to a general contraction across a series. This trend is reversed at points where d orbitals that coincide with bonds are occupied. The above effects were noted for octahedral metal oxides by van Santen & van Wieringen (1952) and demonstrated more recently for a series of octahedral complexes by Cotton et al. (1984, 1993). The latter compounds also show evidence of Jahn–Teller distortion. Chemists usually describe the above effects in terms of crystal- or ligand-field theories, which attempt to quantify the energy cost of placing an electron in a bonding d orbital (e.g. for an octahedral complex the d orbitals divide into high energy dx2 − y2 and dz2, directed along the bonds, and lower energy dxy, dxz and dyz projecting between the bonds). Importantly, the energy gap between the two sets of orbitals determines whether it is energetically favourable to pair electrons in the lowest energy orbitals or to semi-fill all five d orbitals before starting to pair electrons (i.e. low-spin versus high-spin configurations).
The same rationale can be used for analysing the title trigonal–bipyramidal (tbp) structures, [MII(Hdabco)(dabco)Cl3]n, where M = Mn, Co, Ni or Cu and dabco = 1,4-diazabicyclo[2.2.2]octane. The Mn and Co structures from the current study (Fig. 1) form an isotypal series with the previously reported Ni (Petrusenko et al., 1997) and Cu analogues (Karan et al., 1999; Viossat et al., 1988). In the tbp geometry, the five d orbitals divide into three sub-sets, viz. low-energy dxz and dyz, medium-energy dxy and dx2 − y2 lying in the same plane as the three equatorial M—Cl bonds, and high-energy dz2, pointing directly along the axial M—N bonds. When the crystallographically determined M—Cl and M—N bond lengths are plotted against d electron configuration (Fig. 2), the curves diverge at NiII. This is as expected for a high-spin tbp system. All bonds contract as electrons fill non-bonding dxz and dyz orbitals in the d5 to d7 configurations, but occupation of equatorial dxy and dx2 − y2 in d8 and d9 cause the M—Cl bonds to lengthen, whilst allowing the M—N bonds to continue contracting. The M—N bonds would not be expected to expand until all five d orbitals are fully occupied. Support for the high-spin assignment is obtained from the tbp compounds, [MIICl3(dabcoH)2] (M = Mn, Fe, Ni and Cu), which were previously classified as high-spin based on spectroscopic studies (Vallarino et al., 1972).
It is likely that Jahn–Teller distortion of the Ni—Cl bonds has been masked by the crystallographic threefold axis. Previous structural studies of [MII(CH3dabco)2Cl3]ClO4 (M = Ni and Cu; Rozell & Wood 1977), where all the bonds are crystallographically independent, showed a small but significant deformation in the d8 Ni complex. The dabco dimensions in the title Mn and Co structures show good agreement and are as expected (Table 2). Interestingly, the M—N bonds are aligned with the crystal c axis in the current structures so that variations in unit-cell dimensions mirror changes in bond lengths. This suggests that spectroscopic excitation of d electrons may well have a macroscopic effect and that these materials should be investigated for opto-mechanical uses.