research papers
Structure and charge analysis of a cyclic aluminium hydride: cyclo-1,5-bis-μ-dimethylamino-3,7-di-μ-hydrido-2,4,6,8-tetrakis(dimethylaluminium)
aDepartment of Chemistry, Fordham University, 441 East Fordham Road, Bronx, New York 10458, USA
*Correspondence e-mail: pcorfield@fordham.edu
The title compound, [Al4(CH3)8(C2H7N)2H2], crystallizes as eight-membered rings with –(CH3)2Al–(CH3)2N–(CH3)2Al– moieties connected by single hydride bridges. In the X-ray structure, the ring has a chair conformation, with the hydride H atoms being close to the plane through the four Al atoms. An optimized structure was also calculated by all-electron density functional theory (DFT) methods, which agrees with the X-ray structure but gives a somewhat different geometry for the hydride bridge. Charges on the individual atoms were determined by valence shell occupancy refinements using MoPro and also by DFT calculations analyzed by several different methods. All methods agree in assigning a positive charge to the Al atoms, negative charges to the C, N, and hydride H atoms, and small positive charges to the methyl H atoms.
Keywords: crystal structure; hydride bridge; organoaluminium; DFT; charge determination.
CCDC reference: 2222230
1. Introduction
In E. P. Schram's early studies on the organometallic chemistry of aluminium, his group analyzed the products of the reaction between dimethylaminoboranes and methyl aluminium hydrides (Hall & Schram, 1969; Schram & Hall, 1971; Schram et al., 1969). In further work, the reaction of dimethylaminoborane, [(CH3)2NBH2]2, with trimethylaluminium led to the isolation of a solid crystalline material. Analysis of single-crystal X-ray data collected in 1970–71 characterized the molecule that had been formed as cyclo-1,5-bis-μ-dimethylamino-3,7-di-μ-hydrido-2,4,6,8-tetrakis(dimethylaluminium), Al4(CH3)8[N(CH3)2]2H2, 1 (Scheme 1). The molecule consists of an eight-membered ring containing singly-bridged hydride atoms, one of the first examples of such bridging at that time. Circumstances prevented completion of the although the molecular structure without atomic parameters was described in a paper on the chemical reaction (Glore et al., 1972). We now present details of this X-ray study based upon of the 1971 data, together with an atomic charge–density analysis, and we compare the structure and charges with those found from a theoretical study.
2. Experimental
2.1. Synthesis and crystallization
Details of the vacuum line synthesis of the title compound, its purification by vacuum et al. (1972). The data crystal was mounted in a 0.5 mm thin-walled capillary tube in a dry-box and sealed under a nitrogen atmosphere.
and its chemical and spectroscopic analyses are given in Glore2.2. details
Crystal data, data collection and structure . Since the original data reduction listed structure factors, F, rather than the F2 values used in today's refinements, the 29 cases where the averaged values of the net intensity were less than zero had been recorded with F values of zero. On preparing hkl files with F2 values, these 29 zero values were replaced with F2 = σ(F2) = 0.63S, where S was the average value of σ(F2) for reflections with F2 < 3σ(F2) in the same θ range. 0.63S was chosen as the most probable value of the missing reflection.
details are summarized in Table 1In refinements with SHELXL2018, the methyl H atoms were constrained to tetrahedral geometry, with bond lengths of 0.96 Å and displacement parameters set to 1.5 times the average U value of the methyl C atom. A torsion angle was also refined for each methyl group. The bridging H atom was allowed to refine freely with an isothermal displacement parameter. Standard scattering factors were used and an extinction parameter was refined.
In the MoPro charge refinements, scattering factors are computed from Slater-type wave functions tabulated by Thakkar (Koga et al., 1999). The methyl H atoms were constrained to tetrahedral geometry, with bond lengths of 1.099 Å and displacement parameters set to 1.5 times the average U value of the methyl C atom, but no torsion angles were refined. The hydride H atom was refined anisotropically in order to distinguish it from other H atoms and to refine its occupancy factor; the mean-square atomic displacements found were: 0.07, 0.10, and 0.15. No positional parameter differences of more than 2σ were seen between the SHELX and MoPro refinements.
3. Results and discussion
3.1. Description of the X-ray structure
Fig. 1 shows atomic displacement ellipsoids for the and the atom numbering. The title compound crystallizes as eight-membered rings with hydride H atoms joining two Me2Al–Me2N–Me2Al moieties. Overall, the molecule has a chair conformation. The Al and hydride H atoms are essentially coplanar, with the H atoms just 0.06 (2) Å from the central plane of the four Al atoms, and the N atoms displaced 0.841 (2) Å above and below this Al4 plane. The dihedral angle between the Al4 central plane and the Al—N—Al edge plane is 54.3 (1)°, a little larger than the comparable angle of 49.2° in cyclohexane. Methyl groups C1, C3 and C5 are equatorial, and methyl groups C2, C4, and C6 are axial. The Al—N distances are normal, at 1.941 (3) and 1.941 (4) Å, while the Al—H distances are 1.657 (19) and 1.692 (19) Å. The internal angles at the Al atoms are 95.8 (7) and 96.8 (7)°, while at the N atom, the internal angle is 115.49 (10)°. The Al—H—Al angle deviates significantly from linearity, at 153 (1)°, with the H atoms moved towards the center of the ring, reducing the H⋯H distance to 2.52 (4) Å, close to the sum of the van der Waals radii for the H atoms.
3.2. Supramolecular features and Hirshfeld surface analysis
The molecules pack in a centered arrangement with regard to the . All the shortest intermolecular contacts are due to H⋯H contacts between methyl groups, with H⋯H contact distances greater than twice the van der Waals radius for hydrogen. The molecule was analyzed by the Hirshfeld procedure (Spackman et al., 2009; Tan et al., 2019) using CrystalExplorer (Turner et al., 2017). The dnorm plots in Figs. 3(a) and 3(a) are all blue, again indicating no contacts less than the sum of the van der Waals radii. The surface tends to be flattened at the methyl groups. The fingerprint plot is featureless, in line with the lack of strong intermolecular interactions, and all contacts at the surface are H⋯H contacts. Intermolecular interaction energies calculated with CrystalExplorer are given in Table 2. As can be seen, the dominant interactions are due to dispersion forces between the H atoms, with only minor contributions from Coulombic, polarization, and exchange–repulsion forces.
as shown in Fig. 2
|
3.3. Database survey
There are over 7000 crystal structures with a metal hydride bridge in the Cambridge Structural Database (CSD; Groom et al., 2016). Of these, 52 hits were found that contain a singly-hydride-bridged pair of Al atoms and for which atomic coordinates were available. Six of these cases contained μ3- or μ4-bridging hydrides, while the remaining 46 hits, with 64 hydride geometries, contain a single μ2-bridging hydride atom. The Al—H distances range from 1.46 to 1.90 Å, with a mean of 1.73 Å. The Al—H distances in the present structure of 1.657 (19) and 1.692 (19) Å fall at the center of this range. The angles at the hydride anion vary widely, from 94 to 180°. The hydride bond angle is clearly more flexible than the typical bond angle between normal two-center covalent bonds. One factor affecting this angle must be that the hydride bridge is often part of a ring of atoms that contain the Al—H—Al moiety, with ring sizes varying widely. The chart in Fig. 4 based on 56 cyclic structures shows a rough correlation between the hydride angle and the ring size, with the smallest angles generally occurring when the Al—H—Al bridge is in a three- or four-membered ring, and the larger angles being associated with larger ring sizes. (Seven of the other structures were acyclic and one had a very large ring which was not plotted.) A further factor in the wide range of bond angles observed is the presence of many Al cluster compounds, for which the bonding pattern is complicated. Hydride bond angles for eight-membered rings, for which there should be few stereochemical constraints, as in the present structure, range from 144 to 157°. The Al—H—Al bond angle in the present structure of 153 (1)° falls nicely in this range.
3.4. Theoretical structure calculations
Density functional theory (DFT) calculations were performed on the neutral gas-phase C12H38Al4N2 building unit, at the unrestricted B97-2/aug-cc-pvDZ level using GAUSSIAN16 (Frisch et al., 2019). The optimized structure and charges are archived at the NOMAD repository (doi: 10.17172/NOMAD/2022.08.27-1). Previous work found that this level of theory gave the best description of the geometry and thermochemistry of AlnNm and AlnHm clusters (Loukhovitski et al., 2016, 2018). The gas-phase structure of the DFT calculations was expected to match the X-ray structure, since the crystal intermolecular forces are weak. As a check, DFT calculations were also made for dimers along the z axis and the n-glide plane directions, with insignificant changes in geometry and charge.
We compare the X-ray structure and the fully optimized DFT structure in Fig. 5, where methyl H atoms have been excluded. The overall match is good, with bond angles between non-H atoms all agreeing within 1–2°, and bond lengths differing by no more than 0.03 Å, except for the Al—N bond length, which is 2.00 Å in the DFT structure versus 1.94 Å in the X-ray structure. Other differences include: (a) X-ray C—H distances show the expected shortening compared with those in the DFT structure (0.96 versus 1.10 Å), due to scattering of X-rays from the electron density, which for bonded H atoms is pulled into the bond and away from the nucleus; (b) torsion angles for the methyl groups are closer to the in the optimized structure, whereas the C2 and C3 methyl groups on the Al atoms are twisted 15 and 23° from the presumably due to interactions in the crystal; (c) the DFT and X-ray hydride H-atom positions are 0.41 Å apart. The DFT Al—H—Al angle is 145°, smaller than the angle of 153 (1)° in the X-ray structure, while the hydride H atom is 0.27 Å above the Al4 plane in the DFT structure, compared with 0.06 (2) Å in the X-ray structure. The differences are illustrated in Fig. 6, which also shows an Fo–Fc Fourier synthesis where the hydride contribution to Fc has been subtracted out. We can understand the hydride bridge in simple terms as a bent 3c—2e bond where both electrons come from the H− ion, as reviewed recently by Parkin (2019). Presumably, much of the difference between the hydride geometry from the DFT calculations and from the X-ray crystal structures is again an artifact due to the electron density from the bridging H atom being pulled into the two bonds.
3.5. Charge density analysis: X-ray and theoretical
3.5.1. X-ray charge analysis
The structure was refined by the conventional independent atom model (IAM) using SHELXL2018 (Sheldrick, 2015). These are the parameters given in the file associated with this article. The resulting IAM model was then refined along with valence shell population parameters by MoPro (Jelsch et al., 2005). Scattering factors used were of the form f = fcore + pκ3fval, where p is a refined parameter, constrained to be the same for chemically equivalent atoms and by a neutrality requirement, and κ is the radial expansion/contraction parameter, set at 1.16 for all methyl H atoms and at 1.00 for the other atoms, as suggested by MoPro. of the positional and displacement parameters and of the p values was carried out in ten alternating cycles. MoPro R values fell from R1(all) = 0.0544 to 0.0489, and Rw from 0.1270 to 0.1082. For just nine extra variables, this is a statistically significant drop, according to Hamilton's R-factor significance test (Hamilton, 1965). The R values for MoPro were somewhat different from those in SHELXL, mainly due to the use of different scattering factors and a slightly different model. Partial charges derived from the p values are shown in Table 3. A file from the MoPro refinements is given in the supporting information.
|
We had fixed κ values at 1.16 for H and 1.00 for the other atoms, as we would not expect κ values to be well defined by refinements with our limited data set. The refined p values, however, are expected to be correlated with the κ values. We have therefore explored the effects of variations in κ for the methyl H atoms, κ(H), first by carrying out refinements to convergence with fixed κ(H) values ranging from 1.06 to 1.26, and then by refining κ values. Refinements indicated that κ(Al), κ(N) or κ(H−) did not differ significantly from unity, and so these values were fixed at unity. A sample where only κ(H) and κ(C) were allowed to vary converged with κ(H) = 1.05 (1) and κ(C) = 0.98 (1), with slightly higher R values. Partial charges corresponding to the p values from this are also given in Table 3. Variations between those obtained from the fixed and from the refined κ values can give an idea of the uncertainties in our partial charges.
In all refinements, the C—H bond lengths were reset to the neutron diffraction value of 1.099 Å for Csp3 (Allen & Bruno, 2010), as is usual for such studies (Stewart, 1970; Meenashi et al., 2020). Significant differences in occupancies were observed if C—H distances were left at the X-ray values of 0.96 Å, as used in the X-ray analysis. However, when a C—H distance of 1.078 Å was used, the values used in CrystalExplorer, no change was more than 1σ. The X-ray charges are not sensitive to small changes in the neutron C—H bond lengths.
3.5.2. Theoretical charge analysis
Although the total electron density is a well-defined quantity in quantum mechanics and density functional theory, there is no unique decomposition of the electron density into atom-centered domains, and there are many different atomic charge assignment methods, which can give quantitatively and even qualitatively different results (Contreras et al., 2017). Therefore, one expects only qualitative agreement amongst the different calculation methods and with the experimental results. Results in Table 3 show atomic partial charge decompositions using Hirshfeld, CM5, Merz–Kollman electrostatic potential, and natural bond orbital (NBO) methods using the optimized structure. Only small (±0.01 e) differences in the results were found when calculations were conducted with atoms fixed to the crystallographic coordinates, or in the presence of dimers along the z axis and glide-axis directions.
The variations between these predictions can be explained as follows:
(i) The Hirshfeld method (also known as a stakeholder or shareholder method) assigns the total electron density to atoms proportional to the relative neutral pro-atomic density; Hirshfeld charges are conceptually most similar to those from crystallographic analysis, but tend to underestimate the magnitude of the charge.
(ii) Charge Model 5 (CM5) adds an empirical correction to the Hirshfeld charges to reproduce experimental dipole moments. Although the CM5 training set included Al-containing compounds, the parameterization did not consider Al—N or Al—H—Al bonds, and so the empirical correction parameters may not be applicable for all of the types of atoms in our structure. Indeed, we see the largest discrepancies with the charge on the hydride.
(iii) Electrostatic potential (ESP) methods assign point charges to the atoms that best reproduce the molecular electrostatic potential; we used the Merz–Kollman (MK) algorithm, although other variations exist (Francl & Chirlian, 2000). A general problem with ESP methods is that atoms buried within the interior of a molecule may be assigned non-physical partial charges as they have minimal contribution to the electrostatic potential surface. This could be an issue in our present application, as both the van der Waals spheres of the hydride H atoms and the Al atoms (surrounded by methyl groups) are obscured.
(iv) Natural Bond Orbital (NBO) methods express the wavefunction in terms of maximally localized atomic orbital-like basis functions whose core orbitals are close to doubly occupied and whose valence orbitals have single occupancy. This is conceptually most similar to the way formal charges are assigned when analyzing Lewis structures (McArdle, 2019). As such, they may overemphasize charge transfer.
3.5.3. Results
Despite the variations between the various theoretical methods, the data shown in Table 3 indicate qualitative agreement of the partial charges obtained from the MoPro refinements and by the DFT calculations. Both the experimental and all theoretical assignments suggest substantial positive charges on the Al atoms, negative charges of about half an electron on the N and bridging H atoms, and negative charges on the C(Al) atoms that are much more negative than on the C(N) atoms. There are small positive charges on the methyl H atoms. These results are consistent with the Al—N and Al—C differences of 1.0 and 1.5, which would indicate a polar Al—N and a more polar Al—C bond. The negative charge found for the bridging H atom is consistent with its characterization as a hydride. The MoPro distinguishes between charges on the methyl H atoms on the Al and N atoms, whereas the charges estimated from the DFT calculations do not distinguish between these H atoms, although the total charges assigned to the Al-bound and N-bound methyl groups are different in each of the DFT calculations. A distinction between the Al-bound and the N-bound methyl groups might be expected on chemical grounds. The limited Cu Kα resolution of the data used in this study forces the MoPro results to be limited to the spherical independent atom model, and the charges are not as well defined as we would wish; use of data collected with a shorter wavelength would have allowed a more sophisticated model by the MoPro program.
Supporting information
CCDC reference: 2222230
https://doi.org/10.1107/S2053229622011391/wp3031sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2053229622011391/wp3031Isup2.hkl
Mopro https://doi.org/10.1107/S2053229622011391/wp3031sup3.txt
Table. DOI:Data collection: Corfield & Gainsford (1972); cell
Corfield & Gainsford (1972); data reduction: Data reduction followed procedures in Corfield et al. (1973) with p = 0.06; program(s) used to solve structure: structure solved by heavy atom method with local programs; program(s) used to refine structure: SHELXL2018 (Sheldrick, 2015); molecular graphics: ORTEPIII (Burnett & Johnson, 1996) and ORTEP-3 (Farrugia, 2012); software used to prepare material for publication: publCIF (Westrip, 2010).[Al4(CH3)8(C2H7N)2H2] | Dx = 0.934 Mg m−3 |
Mr = 318.36 | Melting point: 371 K |
Monoclinic, P21/n | Cu Kα radiation, λ = 1.5418 Å |
a = 14.175 (13) Å | Cell parameters from 18 reflections |
b = 10.378 (11) Å | θ = 6.6–32.0° |
c = 7.692 (7) Å | µ = 1.83 mm−1 |
β = 90.74 (4)° | T = 295 K |
V = 1131.5 (19) Å3 | Block, white |
Z = 2 | 0.48 × 0.40 × 0.17 mm |
F(000) = 352 |
Picker 4-circle diffractometer | 1352 reflections with I > 2σ(I) |
Radiation source: sealed X-ray tube | Rint = 0.068 |
Oriented graphite 200 reflection monochromator | θmax = 58.0°, θmin = 5.3° |
θ/2θ scans | h = −15→15 |
Absorption correction: gaussian Busing & Levy (1957); 8 × 8 × 8 grid | k = −11→11 |
Tmin = 0.46, Tmax = 0.71 | l = 0→8 |
3367 measured reflections | 3 standard reflections every 120 reflections |
1582 independent reflections | intensity decay: 0(2) |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.039 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.110 | w = 1/[σ2(Fo2) + (0.0374P)2 + 0.310P] where P = (Fo2 + 2Fc2)/3 |
S = 1.07 | (Δ/σ)max = 0.020 |
1582 reflections | Δρmax = 0.18 e Å−3 |
93 parameters | Δρmin = −0.20 e Å−3 |
0 restraints | Extinction correction: SHELXL2018 (Sheldrick, 2015), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: heavy-atom method | Extinction coefficient: 0.0017 (6) |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
Al1 | 0.65285 (5) | 0.51751 (7) | 0.41280 (10) | 0.0637 (3) | |
Al2 | 0.48132 (5) | 0.72363 (7) | 0.47924 (11) | 0.0714 (3) | |
N1 | 0.61044 (13) | 0.67245 (17) | 0.5299 (2) | 0.0604 (5) | |
C1 | 0.7692 (2) | 0.4493 (3) | 0.5148 (5) | 0.1004 (10) | |
H1A | 0.764793 | 0.449804 | 0.639229 | 0.151* | |
H1B | 0.821432 | 0.501832 | 0.480213 | 0.151* | |
H1C | 0.778652 | 0.362564 | 0.475149 | 0.151* | |
C2 | 0.6421 (2) | 0.5293 (3) | 0.1614 (4) | 0.1014 (10) | |
H2A | 0.578482 | 0.551219 | 0.129196 | 0.152* | |
H2B | 0.658356 | 0.447829 | 0.110710 | 0.152* | |
H2C | 0.684249 | 0.594546 | 0.120067 | 0.152* | |
C3 | 0.4321 (3) | 0.8403 (3) | 0.6563 (5) | 0.1305 (14) | |
H3A | 0.432406 | 0.797535 | 0.766972 | 0.196* | |
H3B | 0.368677 | 0.864676 | 0.625666 | 0.196* | |
H3C | 0.470986 | 0.915884 | 0.663073 | 0.196* | |
C4 | 0.4578 (3) | 0.7665 (4) | 0.2361 (5) | 0.1150 (12) | |
H4A | 0.446300 | 0.688924 | 0.171200 | 0.172* | |
H4B | 0.511835 | 0.809927 | 0.190111 | 0.172* | |
H4C | 0.403670 | 0.821806 | 0.226961 | 0.172* | |
C5 | 0.6745 (2) | 0.7810 (3) | 0.4799 (4) | 0.0897 (9) | |
H5A | 0.673112 | 0.791362 | 0.355897 | 0.134* | |
H5B | 0.737792 | 0.761947 | 0.517927 | 0.134* | |
H5C | 0.653740 | 0.859217 | 0.533990 | 0.134* | |
C6 | 0.6213 (2) | 0.6521 (3) | 0.7221 (3) | 0.0858 (8) | |
H6A | 0.582310 | 0.581384 | 0.757271 | 0.129* | |
H6B | 0.602508 | 0.728784 | 0.782288 | 0.129* | |
H6C | 0.686069 | 0.633178 | 0.749782 | 0.129* | |
H1 | 0.4342 (14) | 0.5804 (18) | 0.517 (2) | 0.053 (5)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Al1 | 0.0583 (4) | 0.0611 (5) | 0.0718 (5) | −0.0003 (3) | −0.0012 (3) | 0.0051 (3) |
Al2 | 0.0704 (5) | 0.0497 (4) | 0.0941 (6) | 0.0006 (3) | 0.0036 (4) | 0.0002 (4) |
N1 | 0.0680 (12) | 0.0534 (11) | 0.0596 (11) | −0.0141 (9) | −0.0020 (9) | 0.0055 (9) |
C1 | 0.0787 (19) | 0.104 (2) | 0.118 (3) | 0.0152 (17) | −0.0096 (18) | 0.013 (2) |
C2 | 0.107 (2) | 0.118 (3) | 0.0786 (19) | 0.0213 (19) | 0.0050 (17) | −0.0099 (18) |
C3 | 0.138 (3) | 0.086 (2) | 0.168 (4) | 0.020 (2) | 0.034 (3) | −0.032 (2) |
C4 | 0.112 (3) | 0.114 (3) | 0.118 (3) | 0.022 (2) | −0.027 (2) | 0.023 (2) |
C5 | 0.0874 (19) | 0.0711 (18) | 0.110 (2) | −0.0281 (14) | −0.0003 (17) | 0.0095 (16) |
C6 | 0.104 (2) | 0.090 (2) | 0.0631 (16) | −0.0140 (16) | −0.0086 (15) | −0.0027 (14) |
Al1—C2 | 1.941 (4) | C2—H2B | 0.9600 |
Al1—N1 | 1.942 (3) | C2—H2C | 0.9600 |
Al1—C1 | 1.950 (3) | C3—H3A | 0.9600 |
Al1—H1i | 1.692 (19) | C3—H3B | 0.9600 |
Al2—N1 | 1.941 (3) | C3—H3C | 0.9600 |
Al2—C4 | 1.947 (4) | C4—H4A | 0.9600 |
Al2—C3 | 1.958 (4) | C4—H4B | 0.9600 |
Al2—H1 | 1.657 (19) | C4—H4C | 0.9600 |
N1—C6 | 1.499 (3) | C5—H5A | 0.9600 |
N1—C5 | 1.501 (3) | C5—H5B | 0.9600 |
C1—H1A | 0.9600 | C5—H5C | 0.9600 |
C1—H1B | 0.9600 | C6—H6A | 0.9600 |
C1—H1C | 0.9600 | C6—H6B | 0.9600 |
C2—H2A | 0.9600 | C6—H6C | 0.9600 |
C2—Al1—N1 | 112.90 (12) | Al1—C2—H2C | 109.5 |
C2—Al1—C1 | 118.58 (15) | H2A—C2—H2C | 109.5 |
N1—Al1—C1 | 112.29 (13) | H2B—C2—H2C | 109.5 |
C2—Al1—H1i | 107.9 (7) | Al2—C3—H3A | 109.5 |
N1—Al1—H1i | 96.8 (7) | Al2—C3—H3B | 109.5 |
C1—Al1—H1i | 105.7 (6) | H3A—C3—H3B | 109.5 |
N1—Al2—C4 | 113.88 (13) | Al2—C3—H3C | 109.5 |
N1—Al2—C3 | 111.93 (15) | H3A—C3—H3C | 109.5 |
C4—Al2—C3 | 117.96 (18) | H3B—C3—H3C | 109.5 |
N1—Al2—H1 | 95.8 (7) | Al2—C4—H4A | 109.5 |
C4—Al2—H1 | 108.0 (7) | Al2—C4—H4B | 109.5 |
C3—Al2—H1 | 106.5 (7) | H4A—C4—H4B | 109.5 |
C6—N1—C5 | 107.7 (2) | Al2—C4—H4C | 109.5 |
C6—N1—Al2 | 108.73 (17) | H4A—C4—H4C | 109.5 |
C5—N1—Al2 | 108.40 (17) | H4B—C4—H4C | 109.5 |
C6—N1—Al1 | 108.20 (17) | N1—C5—H5A | 109.5 |
C5—N1—Al1 | 108.11 (18) | N1—C5—H5B | 109.5 |
Al2—N1—Al1 | 115.49 (10) | H5A—C5—H5B | 109.5 |
Al1—C1—H1A | 109.5 | N1—C5—H5C | 109.5 |
Al1—C1—H1B | 109.5 | H5A—C5—H5C | 109.5 |
H1A—C1—H1B | 109.5 | H5B—C5—H5C | 109.5 |
Al1—C1—H1C | 109.5 | N1—C6—H6A | 109.5 |
H1A—C1—H1C | 109.5 | N1—C6—H6B | 109.5 |
H1B—C1—H1C | 109.5 | H6A—C6—H6B | 109.5 |
Al1—C2—H2A | 109.5 | N1—C6—H6C | 109.5 |
Al1—C2—H2B | 109.5 | H6A—C6—H6C | 109.5 |
H2A—C2—H2B | 109.5 | H6B—C6—H6C | 109.5 |
H1—Al2—N1—Al1 | 50.1 (7) | N1—Al2—C3—H3A | −61.1 |
Al1—N1—Al2—H1i | 30.4 (4) | N1—Al2—C4—H4A | 82.9 |
N1—Al1—C1—H1A | 44.9 | Al1—N1—C5—H5A | 58.4 |
N1—Al1—C2—H2A | −54.7 | Al1—N1—C6—H6A | −61.8 |
Symmetry code: (i) −x+1, −y+1, −z+1. |
Electronic (Eele), polarization (Epol), dispersion (Edis), and repulsion energies (Erep) are scaled with factors 1.057, 0.740, 0.871, and 0.618, respectively, when combined to form the total energy of interaction. R is the distance between molecular centroids, in Å. |
N | Sym | R | Eele | Epol | Edis | Erep | Etotal | |
1 | 2 | c trans | 7.69 | -4 | -2 | -28 | 8 | -26 |
2 | 4 | n-glide | 9.55 | 0 | -1 | 0 | 0 | -1 |
3 | 4 | n-glide | 9.63 | -2 | -1 | -21 | 7 | -18 |
4 | 2 | b trans | 10.38 | -4 | -1 | -14 | 2 | -16 |
The K values for the two MoPro results are given in the text |
Method | MoPro | Theoretical | ||||
Atom | Fixed K | Varied K | Hirshfeld | cm5 | ESP | NBO |
Al | 1.01 (9) | 1.48 (10) | 0.45 | 0.29 | 0.91 | 1.72 |
N | -0.42 (4) | -0.36 (4) | -0.14 | -0.42 | -0.05 | -1.09 |
H(bridging) | -0.45 (5) | -0.59 (5) | -0.13 | 0.00 | -0.34 | -0.52 |
C(Al methyl) | -0.95 (4) | -1.01 (5) | -0.27 | -0.44 | -0.81 | -1.22 |
C(N methyl) | -0.48 (5) | -0.50 (5) | -0.04 | -0.19 | -0.41 | -0.34 |
H(Al methyl) | 0.27 (2) | +0.24 (2) | 0.02 | 0.10 | 0.15 | 0.21 |
H(N methyl) | 0.07 (2) | +0.02 (3) | 0.05 | 0.13 | 0.14 | 0.19 |
Acknowledgements
We are grateful to J. D. Glore, who mounted the crystal and assisted in the X-ray data collection at the Ohio State University. We thank Michael Zdilla of Temple University for valuable suggestions, and also a reviewer, who advised the use of the κ values in the MoPro refinements. We acknowledge use of the computational resources of the Mercury consortium (https://mercuryconsortium.org/) under NSF grant No. CNS2018427.
Funding information
Funding for this research was provided by: National Science Foundation Equipment Grant (award No. GP8534); National Science Foundation (grant No. DMR-1928882); Henry-Dreyfus Teacher-Scholar (award No. TH-14-010).
References
Allen, F. H. & Bruno, I. J. (2010). Acta Cryst. B66, 380–386. Web of Science CrossRef CAS IUCr Journals Google Scholar
Burnett, M. N. & Johnson, C. K. (1996). ORTEPIII. Report ORNL6895. Oak Ridge National Laboratory, Tennessee, USA. Google Scholar
Busing, W. R. & Levy, H. A. (1957). Acta Cryst. 10, 180–182. CrossRef CAS IUCr Journals Web of Science Google Scholar
Contreras, R., Domingo, L. R. & Silvi, B. (2017). Electron Densities: Population Analysis and Beyond, in Encyclopedia of Physical Organic Chemistry, edited by Z. Wang. Hoboken, New Jersey: John Wiley & Sons Inc. Google Scholar
Corfield, P. W. R., Dabrowiak, J. C. & Gore, E. S. (1973). Inorg. Chem. 12, 1734–1740. CSD CrossRef CAS Web of Science Google Scholar
Corfield, P. W. R. & Gainsford, G. J. (1972). Local versions of standard programs, written at the Ohio State University. Google Scholar
Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854. Web of Science CrossRef CAS IUCr Journals Google Scholar
Francl, M. M. & Chirlian, L. E. (2000). Rev. Comput. Chem. 14, 1–31. CAS Google Scholar
Frisch, M. J., Trucks, G. W., Schlegel, H. B., Scuseria, G. E., Robb, M. A., Cheeseman, J. R., Scalmani, G., Barone, V., Petersson, G. A., Nakatsuji, H., Li, X., Caricato, M., Marenich, A. V., Bloino, J., Janesko, B. G., Gomperts, R., Mennucci, B., Hratchian, H. P., Ortiz, J. V., Izmaylov, A. F., Sonnenberg, J. L., Williams-Young, D., Ding, F., Lipparini, F., Egidi, F., Goings, J., Peng, B., Petrone, A., Henderson, T., Ranasinghe, D., Zakrzewski, V. G., Gao, J., Rega, N., Zheng, G., Liang, W., Hada, M., Ehara, M., Toyota, K., Fukuda, R., Hasegawa, J., Ishida, M., Nakajima, T., Honda, Y., Kitao, O., Nakai, H., Vreven, T., Throssell, K., Montgomery, J. A. Jr, Peralta, J. E., Ogliaro, F., Bearpark, M. J., Heyd, J. J., Brothers, E. N., Kudin, K. N., Staroverov, V. N., Keith, T. A., Kobayashi, R., Normand, J., Raghavachari, K., Rendell, A. P., Burant, J. C., Iyengar, S. S., Tomasi, J., Cossi, M., Millam, J. M., Klene, M., Adamo, C., Cammi, R., Ochterski, J. W., Martin, R. L., Morokuma, K., Farkas, O., Foresman, J. B. & Fox, D. J. (2019). GAUSSIAN16. Revision C.01. Gaussian Inc., Wallingford, CT, USA. https://gaussian.com/. Google Scholar
Glore, J. D., Hall, R. E. & Schram, E. P. (1972). Inorg. Chem. 11, 550–553. CSD CrossRef CAS Google Scholar
Groom, C. R., Bruno, I. J., Lightfoot, M. P. & Ward, S. C. (2016). Acta Cryst. B72, 171–179. Web of Science CrossRef IUCr Journals Google Scholar
Hall, R. E. & Schram, E. P. (1969). Inorg. Chem. 8, 270–274. CrossRef CAS Google Scholar
Hamilton, W. C. (1965). Acta Cryst. 18, 502–510. CrossRef CAS IUCr Journals Web of Science Google Scholar
Jelsch, C., Guillot, B., Lagoutte, A. & Lecomte, C. (2005). J. Appl. Cryst. 38, 38–54. Web of Science CrossRef IUCr Journals Google Scholar
Koga, T., Kanayama, K., Watanabe, S. & Thakkar, A. J. (1999). Int. J. Quant. Chem. 71, 491–497. CrossRef CAS Google Scholar
Loukhovitski, B. I., Sharipov, A. S. & Starik, A. M. (2016). Eur. Phy. J. D, 70, 1–16. CAS Google Scholar
Loukhovitski, B. I., Torokhov, S. A., Loukhovitskaya, E. E. & Sharipov, A. S. (2018). Struct. Chem. 29, 49–68. CrossRef CAS Google Scholar
McArdle, P. (2019). J. Chem. Educ. 96, 1412–1417. CrossRef CAS Google Scholar
Meenashi, R., Selvaraju, K., Stephen, A. D. & Jelsch, C. (2020). J. Mol. Struct. 1213, 128139. CrossRef Google Scholar
Parkin, G. (2019). J. Chem. Educ. 96, 2467–2475. CrossRef CAS Google Scholar
Schram, E. P. & Hall, R. E. (1971). Inorg. Chem. 10, 192–195. CrossRef CAS Google Scholar
Schram, E. P., Hall, R. E. & Glore, J. (1969). J. Am. Chem. Soc. 91, 6643–6648. CrossRef CAS Google Scholar
Sheldrick, G. M. (2015). Acta Cryst. C71, 3–8. Web of Science CrossRef IUCr Journals Google Scholar
Spackman, M. A. & Jayatilaka, D. (2009). CrystEngComm, 11, 19–32. Web of Science CrossRef CAS Google Scholar
Stewart, R. F. (1970). J. Chem. Phys. 53, 205–213. CrossRef CAS Web of Science Google Scholar
Tan, S. L., Jotani, M. M. & Tiekink, E. R. T. (2019). Acta Cryst. E75, 308–318. Web of Science CrossRef IUCr Journals Google Scholar
Turner, M. J., Mckinnon, J. J., Wolff, S. K., Grimwood, D. J., Spackman, P. R., Jayatilaka, D. & Spackman, M. A. (2017). Crystal Explorer17. The University of Western Australia. https://crystalexplorer.net/. Google Scholar
Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.