research papers
The synthesis and E)-2-{[(4-methoxynaphthalen-1-yl)methylidene]amino}-4-methylphenol: Hirshfeld surface analysis, DFT calculations and anticorrosion studies
of (aHigher Normal School of Technological Education of Skikda (ENSET), Algeria, bUnit of Research CHEMS, Chemistry Department, University of Mentouri Brothers, Constantine 1, Algeria, cLaboratory of Electrochemistry, Molecular Engineering and Redox Catalysis (LEIMCR), Department of Basic Education in Technology, Faculty of Technology, University Ferhat Abbas, Setif-1, Algeria, dDepartment of Chemistry, Faculty of Sciences, University of Setif-1, Setif, Algeria, eFaculty of Exact Sciences and Computer Science, University of Jijel, BP 98, Jijel 18000, Algeria, fLaboratory of Analytical Physicochemistry and Crystallochemistry of Organometallic and Biomolecular Materials, University of Constantine 1, 25000, Algeria, gSuperior Normal School of Constantine, University of Constantine 3, 25000, Algeria, hChemistry Department, University of Fribourg, Chemin du Musée 9, CH-1700 Fribourg, Switzerland, and iInstitute of Physics, University of Neuchâtel, rue Emile-Argand 11, 2000 Neuchâtel, Switzerland
*Correspondence e-mail: nadirghichi@yahoo.com
This article is part of a collection of articles to commemorate the founding of the African Crystallographic Association and the 75th anniversary of the IUCr.
The title Schiff base compound, (E)-2-{[(4-methoxynaphthalen-1-yl)methylidene]amino}-4-methylphenol, C19H17NO2 (I), was synthesized via the reaction of 2-amino-4-methylphenol with 4-methoxynaphthalene-1-carbaldehyde. The structure of I was characterized by NMR, IR and UV–Vis spectroscopies in different solvents. The interatomic contacts in the were explored using Hirshfeld surface analysis, which, together with the two-dimensional fingerprint plots, confirm the predominance of dispersion forces in the The molecule of I has a twisted conformation, with the mean plane of the naphthalene ring system being inclined to the plane of the phenol ring by 33.41 (4)°. In the crystal, molecules are linked by C—H⋯O hydrogen bonds to form inversion dimers. There are parallel-displaced π–π interactions present, together with C—H⋯π interactions, resulting in the formation of a three-dimensional structure. The anticorrosion potential of I was also investigated using density functional theory (DFT) in the gas phase and in various solvents. The compound was shown to exhibit significant anticorrosion properties for iron and copper. The molecular structure of I was determined by DFT calculations at the M062X/6-311+g(d) level of theory and compared with the crystallographically determined structure. Local and global reactivity descriptors were computed to predict the reactivity of I. Excellent agreement was observed between the calculated results and the experimental data.
Keywords: Schiff base; crystal structure; Hirshfeld surface analysis; anticorrosion; DFT calculations; carbaldehyde; quantum chemical calculations.
CCDC reference: 2279139
1. Introduction
2) and a carbonyl compound (C=O), such as an aldehyde or a ketone (Yakan et al., 2023). The first Schiff base compounds were synthesized by the Italian scientist Hugo Schiff in 1864 (Qin et al., 2013). They are characterized by the chemical diversity of their structures, i.e. R1R2C=NR3, with R1 and R2 indicating organic side chains, while R3, bound to the N atom, may be an aryl or alkyl group. Due to their interesting and important properties, many researchers have explored ways to obtain general, simple, efficient and inexpensive methods for synthesizing At present, several chemical procedures exist for preparing these compounds, including gentle synthetic methods, such as reflux (Brown & Granneman, 1975; Li et al., 2016; Olar et al., 2017) or microwave-assisted synthesis (Segura et al., 2016; Sk et al., 2020; Mishra et al., 2020). are of great importance in organic chemistry due to their chemical properties and they have wide-ranging applications. They are also used as ligands in coordination chemistry (Mohamed, 2006; Tarafder et al., 2000; Chandra et al., 2009), as intermediates in organic synthesis (Matsumoto et al., 2020) and as colorimetric indicators in mineral analysis.
also known as are organic compounds containing an azomethine (>C=N–). They are formed by the condensation reaction of derivatives of a primary amine (NHRecent research has been focused on studying the effect of corrosion on metals and alloys, and developing materials and techniques to prevent it (John et al., 2023). Corrosion prevention relies mainly on the physical and chemical properties of the inhibitor molecule, the π-orbital properties of the and the electronic structure of the inhibitor (Obot et al., 2009). One effective way of preventing corrosion is the use of organic inhibitors (Zheludkevich et al., 2005; Aljourani et al., 2009). can be used to reduce corrosion and minimize negative environmental effects, based on the ease of their synthesis from relatively inexpensive starting materials and their environmentally friendly properties (Lashgari et al., 2010; Küstü et al., 2007). It is well known that the behaviour of the inhibitors depends on the interaction between the functional groups in the molecule and the surfaces of the metal. The ability of to form closely packed stable complexes in the field of metal ion coordination classifies them as compounds capable of preventing corrosion. The Schiff base is adsorbed onto the metal surface due to the presence of lone-pair electrons on the N atom in the –CH=N— group and the distribution of π double-bond electrons in the structure. This adsorption behaviour leads to the formation of a very thin layer that covers the surface of the metal, thus preventing corrosion (Afshari et al., 2023; Zhang et al., 2023; Jafari et al., 2022).
In view of this interest, we report herein on the synthesis of the title compound, namely, (E)-2-{[(4-methoxynaphthalen-1-yl)methylidene]amino}-4-methylphenol (I). The structure of I was fully characterized by crystallographic and spectroscopic techniques. The anticorrosion efficiency of I was evaluated. Quantum chemical calculations were also carried out for the estimation of the geometrical parameters and reactivity indices of I.
2. Experimental
2.1. Measurements and materials
The reagents used for the synthesis of compound I were obtained commercially and were used without further purification. The NMR spectra were recorded on an RMN 400 MHz Bruker Ascend for 1H. IR spectra were recorded on a Shimadzu IRAffinity-1S spectrometer. The UV–Vis spectra were recorded from 200 to 600 nm using a Unicam Helios Alpha spectrophotometer, with a quartz cell having a path length of 1 cm.
2.2. Anticorrosion experiment
The synthesized compound was subjected to an evaluation of its corrosion-inhibiting efficiency of a steel in sulfuric acid medium, using polarization curves and electrochemical impedance spectroscopy (EIS).
For the experimental conditions, the electrochemical tests were performed in a conventional three-electrode Pyrex glass cell with a capacity of 20 ml using a Gamry Instruments potentiostat/galvanostat/ZRA (Reference 3000), controlled by Gamry framework analysis software (Gamry Echem Analyst, https://www.gamry.com/support-2/software/). The exposed surface area of the (steel) was 0.18 cm2. Before each test, the was polished mechanically using emery paper of decreasing grain size (400, 600, 1200 and 2000) under a water jet, then degreased with ethanol, washed with double-distilled water and air-dried. A platinum electrode was used as a counter-electrode (auxiliary electrode), its role being to ensure the passage of in the electrochemical cell. A saturated calomel electrode [Hg/Hg2Cl2/KCl(sat)/ECS] was used as the reference electrode.
Polarization curves are plotted in a potential range from −800 to −200 mV at a scan rate of 1 mV s−1. The impedance measurements were carried out at open-circuit potential (Eocp) using ac signals of 10 mV amplitude (peak to peak) at frequencies between 100 kHz and 0.01 Hz (Mezhoud et al., 2016; Sakki et al., 2022).
2.3. Computational details
Density functional theory (DFT) calculations were performed for I in the gas phase and in various solvents [n-hexane, chloroform, acetone, methanol, dichloromethane (DCM) and water]. All calculations were carried out using GAUSSIAN16 software (Frisch et al., 2019) without any restriction on the symmetry. The geometry optimization, harmonic frequency calculations and reactivity descriptors were carried out and generated at the M06-2X/6-311+G(d) level of theory. For the solvent-phase calculations, the default self-consistent (solvent) reaction field in GAUSSIAN16 was used, which is the polarizable continuum model (PCM) using the integral equation formalism variant (IEFPCM).
Electronic μ) is the tendency of an atom or molecule to attract electrons; it is given by Equation (1) (see the supporting information for all equations and relations).
(The chemical hardness (η) expresses the resistance of a system to change its number of electrons; it is calculated with relation 2.
The global ω), introduced by Parr et al. (1999), is calculated from the hardness and [see Equation (3)].
index (During the interaction between two molecular systems, the electrons flow from the lower ΔN [see Equation (4)], was estimated according to Pearson (Parr & Pearson, 1983; Hannachi et al., 2015; Fellahi et al., 2021).
(nucleophile, Nu) to the higher (electrophile, E) until the becomes equalized. The fraction of the transferred electron,On the other hand, the Fukui function f(r) and the dual descriptor Δf(r) are local reactivity descriptors which reflect the ability of a compound site to donate or accept electrons. The Fukui function proposed by Parr & Yang (1984) can be evaluated for nucleophilic attack , electrophilic attack and radical (neutral) attack (see Equations 5, 6 and 7).
Furthermore, the local philicity index () can easily be evaluated from Equations (8) and (9).
The dual descriptor Δf(r) (Morell et al., 2005; Roy et al., 1998) is more convenient to use than the Fukui function (Chen et al., 2022).
2.4. Synthesis and crystallization
A mixture of 2-amino-4-methylphenol (0.246 g) and 4-methoxynaphthalene-1-carbaldehyde (0.372 g) in methanol (25 ml) was stirred for 1 h. At the end of the reaction, the solvent was evaporated in vacuo. The resulting residue was recrystallized from methanol to give small orange block-like crystals (m.p. 147–149 °C).
2.5. Refinement
Crystal data, data collection and structure . The OH H atom of I was located in a difference Fourier map and refined freely. The C-bound H atoms were positioned geometrically (C—H = 0.94–0.97 Å) and refined as riding, with Uiso(H) = 1.5Ueq(C) for methyl H atoms and 1.2Ueq(C) otherwise.
details are summarized in Table 13. Results and discussion
3.1. Analytical data
3.1.1. IR spectroscopy
In the experimental IR spectrum of I, the C—Har (ar is aromatic) band at 2931–2846 cm−1, the C=C elongation bands at 1512 cm−1 and the deformation domain in the C—Har plane (1000 to 700 cm−1) were of particularly high intensity. The C—Har region can be divided into three subregions: adjacent 1H (1022 to 906 cm−1), adjacent 2H (centred on 819 cm−1) and 4H (centred on 750 cm−1). The IR spectra show the main characteristic imine (C=N) band at 1568 cm−1. A band located at 3348 cm−1 can be attributed to the stretching of the hydroxy function (–OH) of the phenol group. The peak obtained at an average intensity of 1512 cm−1 can be attributed to the elongation vibration of the C=C aromatic bond. The observed strong peak at 1217 cm−1 can be attributed to the stretching of the C—O—C bond of the methoxy ether group (–OCH3) present in the molecule, and the strong peak at 1093 cm−1 can be attributed to the stretching of the C—OH bond in the ring. The band observed around 1350 cm−1 was assigned to CH3 bending. The IR spectra of I are consistent with the structure determined by X-ray indicating a high degree of agreement between the two methods.
3.1.2. 1H NMR spectroscopy
Compound I was characterized by its 1H NMR spectrum, which exhibited several diagnostic signals. 1H NMR (400 MHz, CDCl3): δ 2.34 (3H, s, CH3), 4.06 (3H, s, OCH3), 6.93–6.88 (2H, m, H17, H3), 6.99 (1H, dd, J = 8.2, 1.5 Hz, H16), 7.11 (1H, s, H14), 7.55 (1H, ddd, J = 8.1, 6.9, 1.0 Hz, H6), 7.64 (1H, ddd, J = 8.4, 6.9, 1.3 Hz, H7), 8.07 (1H, d, J = 8.2 Hz, H8), 8.35 (1H, d, J = 7.7 Hz, H2), 8.96 (1H, d, J = 8.5 Hz, H5), 9.17 (1H, s, CHN).
For the 1H NMR spectrum of I (see Figs. S9 and 10 in the supporting information), two singlets were observed at δ = 2.34 and 4.06 ppm, corresponding to the protons of methyl groups 19 and 11, respectively. Protons H17 and H3 were observed in the 6.93–6.88 ppm region and exhibit a multiplet pattern. There is a 1H integration doublet of doublets at δ = 6.99 ppm, with coupling constants J = 8.2 and 1.5 Hz, which is characteristic for proton H16. The singlet with a 1H integration at δ = 7.11 ppm was assigned to proton H14. Two 1H integrations as doublet of doublet of doublets were detected at δ = 7.55 and 7.64 ppm, with coupling constants J = 8.1/6.9/1.0 and 8.4/6.9/1.3 Hz, respectively, which is characteristic for protons H6 and H7, respectively. Three 1H integration doublets were detected at δ = 8.07, 8.35 and 8.69 ppm, with coupling constants J = 8.2, 7.7 and 8.5 Hz, respectively, which is characteristic of an ortho coupling for protons H8, H2 and H5, respectively. Finally, a 1H integration singlet was detected at δ = 9.17 ppm, corresponding to the proton of the CH=N group.
3.2. Crystallographic studies
3.2.1. Molecular and crystal structure
The molecular structure of I is illustrated in Fig. 1. A search of the Cambridge Structural Database (CSD, Version 5.43, last update November 2022; Groom et al., 2016) returned only one similar compound, viz. 5-methyl-2-[(naphthalen-1-ylmethylidene)amino]phenol (CSD refcode EXIPIL; Orona et al., 2011).
In I, the mean plane of the naphthalene ring system (atoms C1–C10; r.m.s. deviation 0.015 Å) is inclined to the plane of the phenol ring (C13–C18) by 33.41 (4)°. In EXIPIL, the corresponding dihedral angle is only 7.96 (9)°. The methoxy group in I lies slightly out of the plane of the ring to which it is attached, with the dihedral angle of CH3—O—Car with respect to the naphthalene ring plane (C1–C4/C9/C10) being 6.08 (12)°. There is an intramolecular hydrogen bond (O2—H2O⋯N1) involving the phenol –OH group and the amino N atom (Table 2), forming an S(5) ring motif. The configuration about the C=N double bond is E and the C12=N1 bond length is 1.2741 (14) Å. This configuration is the same as in EXIPIL, where the C=N bond length is 1.273 (3) Å.
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In the crystal of I, molecules are linked by C—H⋯O hydrogen bonds to form inversion dimers (Fig. 2 and Table 2). As shown in Fig. 2, the dimers are linked by parallel-displaced π–π interactions involving inversion-related naphthalene rings [blue; the centroid–centroid distance is 3.967 (1) Å, the interplanar distance is 3.4707 (4) Å and the slippage is 1.922 Å] and inversion-related phenol rings [red; the centroid–centroid distance is 3.732 (1) Å, the interplanar distance is 3.445 (1) Å and the slippage is 1.437 Å], forming slabs lying parallel to the bc plane. The slabs are linked by a C—H⋯π interaction (Table 2) and a second π–π interaction involving inversion-related naphthalene rings [blue; the centroid–centroid distance is 3.819 (1) Å, the interplanar distance is 3.5302 (4) Å and the slippage is 1.458 Å] to form a three-dimensional (3D) framework.
3.2.2. Hirshfeld surface analysis and two-dimensional (2D) fingerprint plots
The Hirshfeld surface analysis (Spackman & Jayatilaka, 2009) and the associated 2D fingerprint plots (McKinnon et al., 2007) were performed and created with CrystalExplorer21 (Spackman et al., 2021), following the protocol of Tiekink and collaborators (Tan et al., 2019).
The various Hirshfeld surfaces (HS) of I are shown in Fig. 3. There are important contacts present in the crystal; the stronger hydrogen bonds are indicated by the small and large red zones in Fig. 3(a). The presence of π–π interactions is confirmed by the blue and red triangular shapes in Fig. 3(b), and by the flat regions around the naphthalene and phenol rings in Fig. 3(c).
The 2D fingerprint plots for I are given in Fig. 4. They reveal that the principal contributions to the overall HS surface involve H⋯H contacts at 54.9% and C⋯H/H⋯C contacts at 19.1%. The latter are the result of the C—H⋯π interactions in the crystal. These are followed by the O⋯H/H⋯O and C⋯C contacts at 11.1% each. These are related to the C—H⋯O hydrogen bonds and the various π–π interactions present in the crystal (see Table 2 and Fig. 3). The N⋯H/H⋯N contacts at 2.7% reflect the presence of an intramolecular O—H⋯N hydrogen bond. The O⋯C/C⋯O and N⋯C/C⋯N contacts amount to only 0.6 and 0.5%, respectively.
3.2.3. Energy frameworks
Fig. 5 shows a comparison of the energy frameworks calculated for I, including the electrostatic potential forces (Eele), the dispersion forces (Edis) and the total energy diagrams (Etot). The energies were obtained using the wavefunction at the HF/3-2IG level of theory. The cylindrical radii are proportional to the relative strengths of the corresponding energies (Spackman et al., 2021; Tan et al., 2019). They have been adjusted to the same scale factor of 90 with a cutoff value of 6 kJ mol−1 within a radius of 6 Å of a central reference molecule. As can be seen in Fig. S1 (see supporting information), the interatomic interactions in the crystal are dominated by dispersion forces (Edis), reflecting the absence of classical intermolecular hydrogen bonds in the crystal. The colour-coded interaction mappings within a radius of 6 Å of a central reference molecule and the various contributions to the total energy (Etot) for I are given in Fig. S1.
3.3. Anticorrosion study
The polarization curves and electrochemical impedance spectroscopy (EIS) plots of steel in 0.5 M H2SO4 medium in the absence and presence of the inhibitor I are presented in Figs. 6 and 7, respectively. It can be seen that in the presence of 5 × 10−3 M of I, the anodic and cathodic curve shifts towards the lower values of the current densities, which means that the addition of this compound to the corrosive medium reduces the anodic dissolution of the steel and also delays the reduction of hydrogen ions, which may be due to adsorption on the steel surface (Li et al., 2011; Deng et al., 2011). The diameter of the capacitive loop increases considerably after addition of the inhibitor, indicating the formation of an inhibition film on the steel surface.
The values of the electrochemical parameters and of the inhibitory efficiency (IE, %) in the absence and in the presence of 5 × 10−3 M of the inhibitor obtained by the polarization curves and the electrochemical impedance spectroscopy (EIS) are given in Table 3.
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The IE was calculated using the following equations:
where Icorr and Icorr(0) are the densities in the absence and presence of the inhibitor, respectively, and Rct and Rct(0) are the charge-transfer resistance values with and without inhibitor.
From the parameters shown in Table 3, it can be seen that the addition of 5 × 10−3 M of compound I to the corrosive medium decreases significantly the value of the corrosion current density (Icorr) and increases the charge-transfer resistance. The decrease in Icorr and the increase in load-transfer resistance can be attributed to the adsorption of inhibitor molecules onto the steel surface, thus forming a protective layer. On the other hand, the value of the (Ecorr) moves in a negative direction. This shift relative to H2SO4 alone is less than 85 mV/SCE (about 66 mV). This suggests that I acts as a mixed inhibitor (Musa et al., 2010; Döner et al., 2011). The IE values calculated by both methods show good protection of this compound against the corrosion of API 5L Grade B steel in 0.5 M sulfuric acid.
3.4. Experimental absorption spectral analysis
The absorption spectra of compound I in solvents of different polarities were measured in order to study the effects of solvent polarities on the electronic absorption spectra of the compound (see Fig. S2). A series of absorption spectra were recorded in n-hexane, chloroform, dichloromethane (DCM), acetone, methanol and water solutions (at concentrations of the order of 10−4 mol l−1) to study the role of solvent polarity in modifying the electronic states of the compound (Fig. S2). Two main absorption bands characterize the absorption spectra of the studied compound; the first is attributed to the electronic transitions π→π* and the second to the transition n→π*.
From the absorption spectra, we can see that the use of solvents of different polarities caused differences in the electronic transitions, which led to differences in the absorption spectra. Two main absorption bands characterize the different absorption spectra of our molecule. The first bands around 240 nm were very close to each other for all the solvents except acetone, where we observed a bathochromic shift.
In general, the presence of an enol–keto equilibrium, the nature of the substitutions, the solvent environment, hydrogen bonding, temperature, pH and changes in the et al., 2012).
of the molecules are the key factors in determining the solvatochromism of compounds (Zakerhamidi3.5. DFT and TD–DFT studies
3.5.1. DFT-optimized geometry
The geometry optimization of I was carried out using the X-ray coordinates and DFT calculations at the M062x/6-311+g(d) level in the gas phase and various solvent environments (see Fig. S3 in the supporting information). Table 4 includes the equilibrium bond distances and angles, as well as the r.m.s. error (RMSE) values.
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The optimized structure of compound I compares well with the experimental data. In particular, the calculated C27—N4, C35—O2 and C10—O1 bond lengths in the gas phase and solvents are smaller than the experimental values (by approximately −0.003, −0.014 and −0.012 Å, respectively), whereas the N4—C25 and C25—C5 bonds are longer than the experimental values by ca 0.002 and 0.005 Å. Additionally, Fig. S5 presents an overlay of the X-ray crystallographic structure and the optimized geometry of I in water, and the RMSE values were calculated as 0.368, 0.353, 0.340, 0.329, 0.330 and 0.328 Å in the gas phase, n-hexane, chloroform, methanol, acetone and water, respectively. These results indicate that the RMSE values are lower in polar solvents (water, acetone and methanol) in comparison to nonpolar solvents. Based on these findings, we can deduce that the calculated geometries, which include bond lengths and angles, are in excellent agreement with the experimental data. On the other hand, it should be noted that the evaluation of the computed thermodynamic parameters at 298.15 K in Table 5 showed a minimal effect of the solvents on the (Ho), Gibbs free energy (Go) and the molar (Cv) of the title compound.
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3.5.2. Inhibition mechanism
To investigate the interaction between the inhibitor molecule and the bulk metal surface (Fe and Cu), we computed the global and local reactivity indices; they are listed in Table 6, and in Table S1 in the supporting information. Our quantum chemical calculations revealed that the gas phase exhibited the lowest values of chemical hardness, suggesting the weaker stability of I. Conversely, the solvent demonstrated the largest hardness value of I (greater stability). The order of increasing hardness in the studied compound was as follows: η(water) = η(acetone) = η(methanol) > η(DCM) > η(chloroform) > η(n-hexane). On the other hand, the of I was found to be greater in the gas phase compared to that in the solvent (gas > n-hexane > chloroform > DCM > acetone > methanol > water). These outcomes suggest that the tendency of the electron to depart from the equilibrium inhibitor compound increases with a decrease in the (which increases from the gas to nonpolar and polar environments). In simpler terms, the increase in the μ values signifies that I has a greater inclination to donate electrons in n-hexane than in any other solvent. Based on the global scale (Hannachi et al., 2015, 2021; Domingo et al., 2002), inhibitor molecule I can be categorized as a strong with values ranging from 1.446 to 1.55 eV.
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χ) is an excellent parameter that helps to determine the direction of electron flow between the metal surface and the inhibitor compound until a balance in is achieved. When the inhibitor molecule is adsorbed on the metal surface, particularly on iron and copper with electronegativities of 7 and 4.9 eV (Michaelson, 1977; Lemoui et al., 2023; Lesar & Milošev, 2009), respectively, electrons should move in the system from the less electronegative to the more electronegative element. Our calculations reveal that I exhibits less than iron and copper, indicating that it is capable of transferring electrons to the metal surface and the inhibitor will thus exhibit better kinetic interaction with the iron surface compared to the copper surface (Lemoui et al., 2023).
(ΔN, the number of transferred electrons, is a useful quantum chemical descriptor for investigating and studying the interactions between a metal and an inhibitor. This descriptor can provide valuable insights into the mechanism of inhibition and help predict the inhibitory activity of new compounds. The results given in Table 6 revealed that the ΔN value of I/Fe was three times greater than that of I/Cu, suggesting a stronger interaction between the corrosion inhibitor and the iron surface in both the gas and the solvent phases compared to the interaction between the inhibitor and copper. Additionally, in gas and nonpolar media (n-hexane, chloroform and DCM), compound I exhibited a slightly higher ΔN value among the tested solvents, indicating a slightly greater potential for releasing electrons into the low-lying vacant d orbitals of the metal (Lemoui et al., 2023; Alaoui Mrani et al., 2021) relative to acetone, methanol and water. This observation suggests that compound I may be a promising inhibitor for preventing corrosion in non-aqueous environments and provides insight into the factors that contribute to its inhibitory activity. By understanding the electronic structure and the interaction of the inhibitor with the metal surface, we can develop new and more effective corrosion inhibitors for various industrial applications.
On the other hand, a corrosion inhibitor with weak ω) exhibits a good potential for releasing electrons, which leads to efficient interaction and stabilization on metal surfaces. The trend of (ω) is as follows: water > methanol > acetone > DCM > chloroform > n-hexane > gas. The results indicate that gas, n-hexane, chloroform and DCM (nonpolar media) showed a smaller value of ω than the suggesting that these media contribute significantly to the corrosion inhibition potential.
(The sites that exhibit the highest values of condensed Fukui functions (FFs) f− and f+ correspond to those suitable for electrophilic and nucleophilic attacks, respectively. Table 7 shows the values of the Fukui function and a dual descriptor for I after nucleophilic and electrophilic attack. DFT calculations show that the local reactivity descriptor has a larger value in polar solvents than in nonpolar solvents. Furthermore, an analysis of these results shows that atoms N4 and C25 have the highest values of , suggesting that these sites act as electron acceptors. On the other hand, atoms O2 and C5 have large values of , indicating that they act as electron donors. The local philicity index and dual descriptor Δf(r) (see Fig. S6) exhibit a remarkable agreement with the FF, and it is found that atom C5 is the preferred site for electrophilic attack.
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3.5.3. TD–DFT calculations of absorption spectra
The electronic spectral analysis of the title compound was performed using the time-dependent DFT (TD–DFT) method and the IEFPCM model in gas and various polar and nonpolar solvent phases. The calculations were carried out at the TD-M062x/6-311+g(d) level of theory on the ground-state-optimized geometry. The computed fos), as well as the absorption properties of compound I, are presented in Table 7 and Figs. S3 and S4 of the supporting information.
wavelength (nm), (eV) and oscillator strengths (The simulated UV–Vis spectrum of I (Fig. S7) contains two regions of high oscillator strengths falling in the ranges 180–280 and 280–450 nm. From the TD–DFT outcomes it is apparent that the solvent does not have a significant impact on the UV–Vis spectrum. Conversely, when comparing the computed and experimental spectra, a shift towards higher wavelength can be observed for the experimental results, and the discrepancy between them is minimal. On the other hand, we can observe that the most intense band centred at about 351 and 345 nm (f = 0.8 and 0.6) for the solvent and gas phases, respectively, is caused by a HOMO→LUMO electronic transition (see Table 7). Analysis of the (Fig. S8) shows that this transition has a mixed character of π→π* and n→π* (n in N and O atoms). Furthermore, a moderate absorption band was observed at ∼231 nm for the solvent and at 226 nm (f = 0.44) in the gas phase, which corresponds to the electronic transition from HOMO-3 to LUMO having a π→π* character, where π is localized on fragment I (see Fig. S3 in the supporting information). The absorption bands observed at 296 nm in acetone and methanol are a result of the HOMO-1→LUMO transitions with n→π*/π→π* character, and these transitions exhibit lower oscillator strengths with a value of f = 0.004, whereas the band at 199 nm is due to a HOMO-1→LUMO+2 transition with n→π*/π→π* character (where the π* is localized in fragment I).
4. Conclusions
The title Schiff base, (E)-2-{[(4-methoxynaphthalen-1-yl)methylidene]amino}-4-methylphenol (I) was synthesized and its structure characterized by X-ray and by IR, 1H NMR and UV–Vis spectroscopies. All the major interatomic and intermolecular interactions have been discussed and explained. The Hirshfeld surface analysis was carried out and indicated the dominance of the H⋯H (54.9%) and C⋯H/H⋯C (19.1%) interatomic contacts in the which could be helpful for future drug design. The high chemical hardness and as an anticorrosive agent emphasizes the possible use of I in the metals industry, and it has been shown to be a promising anticorrosive agent. The results obtained by both methods show that compound I could serve as an effective corrosion inhibitor of API 5L Grade B steel in 0.5 M H2SO4. The corrosion inhibition potentials of I were investigated using quantum chemical calculations at the ω B97XD level with the 6-311+g(d) basis set in the gas phase and in various solvents.
Supporting information
CCDC reference: 2279139
https://doi.org/10.1107/S2053229623005867/zo3036sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2053229623005867/zo3036Isup2.hkl
Figures and Table of optimized structure. DOI: https://doi.org/10.1107/S2053229623005867/zo3036sup3.pdf
Data collection: WinXpose in X-AREA (Stoe & Cie, 2022); cell
Recipe in X-AREA (Stoe & Cie, 2022); data reduction: Integrate and LANA in X-AREA (Stoe & Cie, 2022); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL2018 (Sheldrick, 2015); molecular graphics: PLATON (Spek, 2020) and Mercury (Macrae et al., 2020); software used to prepare material for publication: SHELXL2018 (Sheldrick, 2015), PLATON (Spek, 2020) and publCIF (Westrip, 2010).C19H17NO2 | Z = 2 |
Mr = 291.33 | F(000) = 308 |
Triclinic, P1 | Dx = 1.320 Mg m−3 |
a = 7.7740 (4) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 7.9955 (4) Å | Cell parameters from 11095 reflections |
c = 12.4836 (6) Å | θ = 1.7–27.3° |
α = 106.383 (4)° | µ = 0.09 mm−1 |
β = 98.191 (4)° | T = 250 K |
γ = 93.279 (4)° | Block, orange |
V = 732.96 (7) Å3 | 0.61 × 0.39 × 0.18 mm |
STOE IPDS II diffractometer | 3090 independent reflections |
Radiation source: sealed X-ray tube, 12 x 0.4 mm long-fine focus | 2742 reflections with I > 2σ(I) |
Plane graphite monochromator | Rint = 0.018 |
Detector resolution: 6.67 pixels mm-1 | θmax = 26.8°, θmin = 1.7° |
rotation method, ω scans | h = −9→9 |
Absorption correction: multi-scan (MULABS; Spek, 2020) | k = −10→9 |
Tmin = 0.875, Tmax = 1.000 | l = −15→15 |
11018 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.038 | Hydrogen site location: mixed |
wR(F2) = 0.113 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0629P)2 + 0.1103P] where P = (Fo2 + 2Fc2)/3 |
3090 reflections | (Δ/σ)max = 0.005 |
205 parameters | Δρmax = 0.20 e Å−3 |
0 restraints | Δρmin = −0.14 e Å−3 |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.37640 (11) | 0.70357 (10) | 0.74315 (6) | 0.0478 (2) | |
O2 | 0.00186 (12) | 0.95474 (11) | 0.15984 (8) | 0.0533 (2) | |
H2O | 0.031 (2) | 0.935 (2) | 0.2219 (16) | 0.084 (6)* | |
N1 | −0.00350 (12) | 0.69499 (12) | 0.25196 (8) | 0.0417 (2) | |
C1 | 0.13306 (13) | 0.60555 (14) | 0.40839 (9) | 0.0361 (2) | |
C2 | 0.13789 (14) | 0.76848 (14) | 0.48464 (9) | 0.0402 (2) | |
H2 | 0.085081 | 0.856781 | 0.459797 | 0.048* | |
C3 | 0.21806 (15) | 0.80813 (14) | 0.59750 (9) | 0.0415 (2) | |
H3 | 0.219226 | 0.921233 | 0.647190 | 0.050* | |
C4 | 0.29521 (13) | 0.68039 (14) | 0.63528 (9) | 0.0379 (2) | |
C5 | 0.37175 (15) | 0.37629 (15) | 0.59984 (10) | 0.0431 (3) | |
H5 | 0.423752 | 0.401751 | 0.676141 | 0.052* | |
C6 | 0.37224 (16) | 0.21274 (15) | 0.52838 (11) | 0.0478 (3) | |
H6 | 0.423091 | 0.125544 | 0.555505 | 0.057* | |
C7 | 0.29682 (16) | 0.17444 (14) | 0.41423 (10) | 0.0465 (3) | |
H7 | 0.299056 | 0.061774 | 0.364824 | 0.056* | |
C8 | 0.22010 (14) | 0.29895 (14) | 0.37397 (9) | 0.0413 (2) | |
H8 | 0.170368 | 0.270557 | 0.297080 | 0.050* | |
C9 | 0.21401 (12) | 0.47005 (13) | 0.44580 (8) | 0.0349 (2) | |
C10 | 0.29405 (13) | 0.50852 (13) | 0.56089 (9) | 0.0360 (2) | |
C11 | 0.3970 (2) | 0.87468 (17) | 0.81915 (11) | 0.0625 (4) | |
H11C | 0.463971 | 0.874752 | 0.890943 | 0.094* | |
H11B | 0.283063 | 0.912636 | 0.830827 | 0.094* | |
H11A | 0.458215 | 0.954118 | 0.787835 | 0.094* | |
C12 | 0.04229 (13) | 0.57172 (14) | 0.29245 (9) | 0.0387 (2) | |
H12 | 0.016817 | 0.455204 | 0.246166 | 0.046* | |
C13 | −0.09569 (13) | 0.65748 (14) | 0.14067 (9) | 0.0383 (2) | |
C14 | −0.18898 (14) | 0.49935 (14) | 0.07476 (9) | 0.0414 (3) | |
H14 | −0.194706 | 0.404229 | 0.104854 | 0.050* | |
C15 | −0.27369 (14) | 0.47931 (15) | −0.03449 (9) | 0.0414 (3) | |
C16 | −0.26515 (15) | 0.62281 (16) | −0.07652 (9) | 0.0447 (3) | |
H16 | −0.322371 | 0.611432 | −0.150197 | 0.054* | |
C17 | −0.17448 (16) | 0.78190 (15) | −0.01252 (10) | 0.0459 (3) | |
H17 | −0.170458 | 0.877361 | −0.042377 | 0.055* | |
C18 | −0.09002 (14) | 0.79882 (14) | 0.09561 (9) | 0.0407 (2) | |
C19 | −0.37175 (17) | 0.30697 (16) | −0.10504 (10) | 0.0523 (3) | |
H19A | −0.495364 | 0.310829 | −0.101543 | 0.078* | |
H19B | −0.329154 | 0.213780 | −0.076131 | 0.078* | |
H19C | −0.354011 | 0.285087 | −0.182962 | 0.078* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0577 (5) | 0.0459 (4) | 0.0346 (4) | 0.0057 (4) | −0.0041 (3) | 0.0091 (3) |
O2 | 0.0640 (6) | 0.0426 (5) | 0.0495 (5) | −0.0021 (4) | −0.0053 (4) | 0.0161 (4) |
N1 | 0.0428 (5) | 0.0459 (5) | 0.0368 (5) | 0.0026 (4) | 0.0009 (4) | 0.0157 (4) |
C1 | 0.0341 (5) | 0.0402 (5) | 0.0353 (5) | 0.0018 (4) | 0.0042 (4) | 0.0143 (4) |
C2 | 0.0427 (6) | 0.0391 (5) | 0.0410 (6) | 0.0070 (4) | 0.0045 (4) | 0.0158 (4) |
C3 | 0.0470 (6) | 0.0367 (5) | 0.0388 (5) | 0.0047 (4) | 0.0051 (4) | 0.0088 (4) |
C4 | 0.0370 (5) | 0.0415 (5) | 0.0340 (5) | 0.0002 (4) | 0.0022 (4) | 0.0118 (4) |
C5 | 0.0430 (6) | 0.0456 (6) | 0.0419 (6) | 0.0045 (5) | 0.0002 (4) | 0.0180 (5) |
C6 | 0.0490 (6) | 0.0416 (6) | 0.0560 (7) | 0.0091 (5) | 0.0039 (5) | 0.0211 (5) |
C7 | 0.0507 (6) | 0.0353 (5) | 0.0511 (6) | 0.0053 (5) | 0.0068 (5) | 0.0096 (5) |
C8 | 0.0428 (6) | 0.0405 (5) | 0.0386 (5) | 0.0012 (4) | 0.0037 (4) | 0.0106 (4) |
C9 | 0.0322 (5) | 0.0364 (5) | 0.0368 (5) | 0.0004 (4) | 0.0049 (4) | 0.0130 (4) |
C10 | 0.0330 (5) | 0.0379 (5) | 0.0373 (5) | 0.0005 (4) | 0.0037 (4) | 0.0131 (4) |
C11 | 0.0786 (9) | 0.0528 (7) | 0.0423 (6) | 0.0112 (6) | −0.0096 (6) | 0.0007 (5) |
C12 | 0.0374 (5) | 0.0426 (6) | 0.0364 (5) | 0.0039 (4) | 0.0041 (4) | 0.0130 (4) |
C13 | 0.0369 (5) | 0.0440 (6) | 0.0350 (5) | 0.0064 (4) | 0.0037 (4) | 0.0142 (4) |
C14 | 0.0411 (6) | 0.0429 (6) | 0.0415 (6) | 0.0040 (4) | 0.0030 (4) | 0.0165 (4) |
C15 | 0.0377 (5) | 0.0460 (6) | 0.0393 (5) | 0.0068 (4) | 0.0044 (4) | 0.0108 (4) |
C16 | 0.0452 (6) | 0.0546 (7) | 0.0345 (5) | 0.0108 (5) | 0.0021 (4) | 0.0146 (5) |
C17 | 0.0519 (6) | 0.0470 (6) | 0.0435 (6) | 0.0098 (5) | 0.0046 (5) | 0.0214 (5) |
C18 | 0.0413 (5) | 0.0402 (5) | 0.0408 (6) | 0.0060 (4) | 0.0041 (4) | 0.0133 (4) |
C19 | 0.0507 (7) | 0.0514 (7) | 0.0477 (6) | 0.0010 (5) | −0.0011 (5) | 0.0087 (5) |
O1—C4 | 1.3601 (12) | C8—C9 | 1.4161 (15) |
O1—C11 | 1.4131 (14) | C8—H8 | 0.9400 |
O2—C18 | 1.3705 (14) | C9—C10 | 1.4212 (14) |
O2—H2O | 0.835 (18) | C11—H11C | 0.9700 |
N1—C12 | 1.2741 (14) | C11—H11B | 0.9700 |
N1—C13 | 1.4109 (13) | C11—H11A | 0.9700 |
C1—C2 | 1.3745 (15) | C12—H12 | 0.9400 |
C1—C9 | 1.4379 (14) | C13—C14 | 1.3927 (15) |
C1—C12 | 1.4603 (14) | C13—C18 | 1.3983 (15) |
C2—C3 | 1.3961 (15) | C14—C15 | 1.3886 (15) |
C2—H2 | 0.9400 | C14—H14 | 0.9400 |
C3—C4 | 1.3735 (15) | C15—C16 | 1.3917 (16) |
C3—H3 | 0.9400 | C15—C19 | 1.5031 (16) |
C4—C10 | 1.4238 (15) | C16—C17 | 1.3845 (16) |
C5—C6 | 1.3599 (17) | C16—H16 | 0.9400 |
C5—C10 | 1.4137 (15) | C17—C18 | 1.3805 (15) |
C5—H5 | 0.9400 | C17—H17 | 0.9400 |
C6—C7 | 1.4012 (16) | C19—H19A | 0.9700 |
C6—H6 | 0.9400 | C19—H19B | 0.9700 |
C7—C8 | 1.3653 (16) | C19—H19C | 0.9700 |
C7—H7 | 0.9400 | ||
C4—O1—C11 | 117.78 (9) | O1—C11—H11C | 109.5 |
C18—O2—H2O | 102.0 (12) | O1—C11—H11B | 109.5 |
C12—N1—C13 | 120.69 (9) | H11C—C11—H11B | 109.5 |
C2—C1—C9 | 118.94 (9) | O1—C11—H11A | 109.5 |
C2—C1—C12 | 119.73 (9) | H11C—C11—H11A | 109.5 |
C9—C1—C12 | 121.31 (9) | H11B—C11—H11A | 109.5 |
C1—C2—C3 | 122.66 (10) | N1—C12—C1 | 122.15 (10) |
C1—C2—H2 | 118.7 | N1—C12—H12 | 118.9 |
C3—C2—H2 | 118.7 | C1—C12—H12 | 118.9 |
C4—C3—C2 | 119.40 (10) | C14—C13—C18 | 118.84 (10) |
C4—C3—H3 | 120.3 | C14—C13—N1 | 127.09 (9) |
C2—C3—H3 | 120.3 | C18—C13—N1 | 114.07 (9) |
O1—C4—C3 | 124.60 (10) | C15—C14—C13 | 121.35 (10) |
O1—C4—C10 | 114.58 (9) | C15—C14—H14 | 119.3 |
C3—C4—C10 | 120.82 (9) | C13—C14—H14 | 119.3 |
C6—C5—C10 | 120.86 (10) | C14—C15—C16 | 118.20 (10) |
C6—C5—H5 | 119.6 | C14—C15—C19 | 120.66 (10) |
C10—C5—H5 | 119.6 | C16—C15—C19 | 121.14 (10) |
C5—C6—C7 | 119.88 (10) | C17—C16—C15 | 121.64 (10) |
C5—C6—H6 | 120.1 | C17—C16—H16 | 119.2 |
C7—C6—H6 | 120.1 | C15—C16—H16 | 119.2 |
C8—C7—C6 | 120.73 (10) | C18—C17—C16 | 119.29 (10) |
C8—C7—H7 | 119.6 | C18—C17—H17 | 120.4 |
C6—C7—H7 | 119.6 | C16—C17—H17 | 120.4 |
C7—C8—C9 | 121.27 (10) | O2—C18—C17 | 120.14 (10) |
C7—C8—H8 | 119.4 | O2—C18—C13 | 119.18 (10) |
C9—C8—H8 | 119.4 | C17—C18—C13 | 120.67 (10) |
C8—C9—C10 | 117.52 (9) | C15—C19—H19A | 109.5 |
C8—C9—C1 | 123.66 (9) | C15—C19—H19B | 109.5 |
C10—C9—C1 | 118.82 (9) | H19A—C19—H19B | 109.5 |
C5—C10—C9 | 119.71 (10) | C15—C19—H19C | 109.5 |
C5—C10—C4 | 120.94 (10) | H19A—C19—H19C | 109.5 |
C9—C10—C4 | 119.35 (9) | H19B—C19—H19C | 109.5 |
C9—C1—C2—C3 | −0.17 (16) | O1—C4—C10—C5 | 0.35 (15) |
C12—C1—C2—C3 | 178.14 (9) | C3—C4—C10—C5 | −179.33 (10) |
C1—C2—C3—C4 | −0.26 (17) | O1—C4—C10—C9 | −179.44 (8) |
C11—O1—C4—C3 | −6.08 (17) | C3—C4—C10—C9 | 0.89 (16) |
C11—O1—C4—C10 | 174.26 (11) | C13—N1—C12—C1 | −178.08 (9) |
C2—C3—C4—O1 | −179.75 (10) | C2—C1—C12—N1 | 14.20 (16) |
C2—C3—C4—C10 | −0.11 (17) | C9—C1—C12—N1 | −167.54 (10) |
C10—C5—C6—C7 | 0.76 (18) | C12—N1—C13—C14 | 19.32 (17) |
C5—C6—C7—C8 | −1.01 (18) | C12—N1—C13—C18 | −161.18 (10) |
C6—C7—C8—C9 | −0.06 (18) | C18—C13—C14—C15 | 0.86 (16) |
C7—C8—C9—C10 | 1.32 (16) | N1—C13—C14—C15 | −179.66 (10) |
C7—C8—C9—C1 | −179.17 (10) | C13—C14—C15—C16 | −0.84 (16) |
C2—C1—C9—C8 | −178.57 (10) | C13—C14—C15—C19 | 179.16 (10) |
C12—C1—C9—C8 | 3.15 (16) | C14—C15—C16—C17 | 0.33 (17) |
C2—C1—C9—C10 | 0.94 (15) | C19—C15—C16—C17 | −179.66 (11) |
C12—C1—C9—C10 | −177.34 (9) | C15—C16—C17—C18 | 0.14 (18) |
C6—C5—C10—C9 | 0.53 (17) | C16—C17—C18—O2 | 179.35 (10) |
C6—C5—C10—C4 | −179.26 (10) | C16—C17—C18—C13 | −0.12 (17) |
C8—C9—C10—C5 | −1.54 (15) | C14—C13—C18—O2 | −179.84 (10) |
C1—C9—C10—C5 | 178.92 (9) | N1—C13—C18—O2 | 0.61 (15) |
C8—C9—C10—C4 | 178.25 (9) | C14—C13—C18—C17 | −0.37 (17) |
C1—C9—C10—C4 | −1.29 (14) | N1—C13—C18—C17 | −179.92 (10) |
Cg1 is the centroid of the phenol ring, C13-C18. |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2O···N1 | 0.84 (2) | 2.069 (18) | 2.6436 (13) | 126 (2) |
C11—H11B···O2i | 0.97 | 2.51 | 3.4725 (19) | 170 |
C19—H19A···Cg1ii | 0.97 | 2.79 | 3.7362 (14) | 165 |
Symmetry codes: (i) −x, −y+2, −z+1; (ii) −x−1, −y+1, −z. |
Method | Polarization curves | EIS | ||||
Compound I | Concentration (M) | -Ecorr (mV) | Icorr (µA cm-2) | IE (%) | Rct (Ω cm-2) | IE (%) |
H2SO4 | 0.5 | 432 | 2794.44 | – | 8.08 | – |
Inhibitor | 5 × 10-3 | 498 | 48.94 | 98.24 | 266.22 | 96.96 |
Exp. | Gas (ε = 1) | n-Hexane (ε = 1.8819) | Chloroform (ε = 4.711) | DCM (ε = 8.93) | Acetone (ε = 20.493) | Methanol (ε = 32.613) | Water (ε = 78.355) | |
C27—N4 | 1.410 | 1.406 | 1.406 | 1.406 | 1.407 | 1.407 | 1.407 | 1.407 |
N4—C25 | 1.274 | 1.275 | 1.276 | 1.277 | 1.277 | 1.277 | 1.277 | 1.277 |
C25—C5 | 1.460 | 1.466 | 1.466 | 1.466 | 1.466 | 1.466 | 1.466 | 1.465 |
C35—O2 | 1.370 | 1.352 | 1.354 | 1.356 | 1.357 | 1.357 | 1.358 | 1.358 |
O1—C10 | 1.360 | 1.350 | 1.348 | 1.347 | 1.346 | 1.346 | 1.346 | 1.346 |
O2—H3 | 2.066 | 2.124 | 2.125 | 2.124 | 2.124 | 2.123 | 2.122 | 2.122 |
C27—N4—C25 | 120 | 120 | 120 | 120 | 120 | 120 | 120 | 120 |
N4—C25—C5 | 122 | 122 | 122 | 122 | 122 | 122 | 120 | 120 |
C27—N4—C25—C5 | 178 | 175 | 175 | 175 | 175 | 176 | 176 | 176 |
R.m.s. error (Å) | - | 0.368 | 0.353 | 0.340 | 0.335 | 0.330 | 0.329 | 0.328 |
Gas (ε = 0) | n-Hexane (ε = 1.8819) | Chloroform (ε = 4.711) | Acetone (ε = 20.493) | DCM (ε = 8.93) | Methanol (ε = 32.613) | Water (ε = 78.355) | |
H (a.u.) | -938.949911 | -938.955536 | -938.959863 | -938.962279 | -938.962556 | -938.962832 | |
G (a.u.) | -939.017972 | -939.023693 | -939.028201 | -939.030818 | -939.031122 | -939.031430 | |
Cv (cal mol-1 K-1) | 73.813 | 73.916 | 74.012 | 74.076 | 74.084 | 74.092 | |
S (cal mol-1 K-1) | 143.245 | 143.448 | 143.828 | 144.252 | 144.309 | 144.376 |
Gas | n-Hexane | Chloroform | DCM | Acetone | Methanol | Water | |
εH | -6.806 | -6.883 | -6.941 | -6.959 | -6.971 | -6.975 | -6.978 |
µ | 5.578 | 5.602 | 5.612 | 5.614 | 5.615 | 5.615 | 5.615 |
η | -4.016 | -4.082 | -4.134 | -4.152 | -4.164 | -4.167 | -4.170 |
ω | 1.446 | 1.487 | 1.522 | 1.535 | 1.543 | 1.546 | 1.549 |
ΔN/I Fe | 0.267 | 0.260 | 0.255 | 0.253 | 0.252 | 0.252 | 0.251 |
ΔN/I Cu | 0.086 | 0.080 | 0.075 | 0.073 | 0.072 | 0.072 | 0.072 |
Gas | n-Hexane | Chloroform | DCM | Acetone | Methanol | Water | ||||||||
f- | Δf | f- | Δf | f- | Δf | f- | Δf | f- | Δf | f- | Δf | f- | Δf | |
O1 | 0.0443 | -0.0204 | 0.0447 | -0.0199 | 0.0484 | -0.0236 | 0.0532 | -0.0285 | 0.0579 | -0.0334 | 0.0594 | -0.035 | 0.0609 | -0.0365 |
O2 | 0.0754 | -0.0469 | 0.0697 | -0.0449 | 0.0589 | -0.037 | 0.0501 | -0.0291 | 0.0424 | -0.022 | 0.0401 | -0.0199 | 0.0379 | -0.0179 |
N4 | 0.0353 | 0.0859 | 0.0485 | 0.0781 | 0.0652 | 0.0672 | 0.075 | 0.0598 | 0.0821 | 0.0544 | 0.084 | 0.0529 | 0.0856 | 0.0518 |
C5 | 0.0624 | -0.0487 | 0.073 | -0.0597 | 0.0938 | (-0.0816) | 0.1119 | -0.1001 | 0.1284 | (-0.117) | 0.1344 | -0.1242 | 0.1392 | -0.1292 |
C25 | 0.0116 | 0.0977 | 0.0084 | 0.1178 | -0.0009 | 0.1416 | -0.01 | 0.1387 | -0.018 | (0.135) | -0.0199 | 0.134 | -0.0221 | 0.1332 |
C27 | 0.0613 | -0.0242 | 0.0588 | -0.027 | 0.048 | -0.021 | 0.0364 | -0.0113 | 0.0258 | -0.0019 | 0.0228 | 0.0008 | 0.0199 | 0.0033 |
Energy overview | Ciprofloxacin | I |
Total energy | -102.177 | -97.198 |
I. External Ligand interactions | -86.388 | -81.785 |
A. Protein–ligand PLP interactions | -12.886 | -9.597 |
Nonpolar | -11.316 | -8.713 |
Hydrogen bond | -1.511 | 0 |
Metal | 0 | 0 |
Buried | -0.06 | -0.884 |
B. Cofactor–ligand PLP interactions | -73.502 | -72.188 |
Nonpolar | -67.436 | -67.81 |
Hydrogen bond | -4.069 | -7.316 |
Metal | 0 | 0 |
Repulsive | 0.06 | 0.076 |
Buried | -2.057 | 2.862 |
II. Internal ligand interactions | 4.211 | 4.587 |
Torsional potential | 1.217 | 4.587 |
Clash potential | 2.994 | 0 |
Acknowledgements
The authors acknowledge the University of Mentouri Brothers, Constantine 1, for constant support. The authors thank the Institute of Analytical Sciences, University Claude Bernard Lyon 1, France, for use of their computing facilities. HSE is grateful to the University of Neuchâtel for their support over the years. Funding for this research was provided by the Department of Higher Scientific Research and CHEMS Research Unit, University of Constantine 1, CRBT research center, Algeria.
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