Protein Three-Dimensional Structural Databases: Domains, Structurally Aligned Homologues and Superfamilies

Sowdhamini, R.; Burke, D.F.; Deane, C.; Huang, J.; Mizuguchi, K.; Nagarajaram, H.A.; Overington, J.P.; Srinivasan, N.; Steward, R.E.; Blundell, T.L.

doi:10.1107/S0907444998007148

Acta Crystallographica Section D
Acta Crystallographica
Section D STRUCTURAL BIOLOGY

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Figure 1
A cartoon representation of the classification and alignment of proteins at various structural hierarchies. HOMSTRAD database contains alignments of homologous sequences. Some of them exist as multi-domain proteins (denoted by different coloured spheres). DDBASE is a compilation of structural domains found in representatives of homologous proteins. CAMPASS is a database of aligned protein domains belonging to superfamilies.

STRUCTURAL
BIOLOGY

ISSN: 2059-7983

Volume 54| Part 6| November 1998| Pages 1168-1177

doi:10.1107/S0907444998007148

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