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Figure 2
Reference-model side-chain examples. (a) LeuA34 from 1gtx/1ohv. The starting model in 1gtx (hot pink) is a rotamer outlier, while the corresponding side chain in 1ohv is a tp rotamer (green). After outlier correction and reference-model restraint generation, LeuA34 refines to a correct tp rotamer (dark blue). (b) GluA41 from 1gtx/1ohv. Both the starting model in 1gtx (hot pink) and 1ohv (green) are mt-10 rotamers, but the refined position with reference-model restraints in 1gtx (dark blue) is a better fit to the density. All images were generated using KiNG (Chen et al., 2009BB12).

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ISSN: 2059-7983
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