Figure 6
Effect of Ramachandran statistics on structure-validation criteria for 19 low-resolution structures (Schröder et al., 2010 ). (a) Ramachandran percent favored and outliers. Red, default (φ and ψ unrestrained); yellow, monomer library uncoupled φ,ψ torsion restraints; green, Ramachandran restraints based on Coot (Emsley et al., 2010 ) and Autobondrot (Word et al., 2000 ); blue, harmonic Ramachandran restraints (Oldfield, 2001 ). Lower bars are percent of residues falling in the favored regions of the Ramachandran plot; upper (lighter and shaded) bars are percent outliers. (b) Clashscores for the same test set colored as in the first plot. |