Figure 1
Crystal structure of M. tuberculosis σK in complex with its negative regulator RskA. (a) The transmembrane anti-σ factor RskA negatively regulates and localizes M. tuberculosis σK. (b) The crystal structure of σK (yellow) in complex with the cytosolic anti-σ domain of RskA (blue) reveals that RskA binding occludes the RNA polymerase interacting and DNA-binding surfaces of σK. The crystal structure reveals a disulfide in domain 4 of σK. (c) Superposition of σK2 on E. coli σE2 (structure obtained from the E. coli σE–RsrA complex; PDB entry 1or7; Campbell et al., 2003 ) and R. sphaeroides σE2 (from the R. sphaeroides σE–ChrR complex; PDB entry 2z2s; Campbell et al., 2007 ). (d) Superposition of the ASDs of M. tuberculosis RskA and RslA (Thakur et al., 2010 ) on the ASD of R. sphaeroides ChrR (Campbell et al., 2007 ). (e) Superposition of σK4 on σE4 of R. sphaeroides (PDB entry 2z2s; Campbell et al., 2007 ) and M. tuberculosis σL4 (structure obtained from the M. tuberculosis σL4–RslA complex; PDB entry 3hug; Thakur et al., 2010 ). (f) The σK–RskAcyto complex reveals extensive interactions between the structured domains of σK and RskAcyto that effectively occlude the DNA-binding and RNA polymerase interacting regions of σK. This interface mostly involves van der Waals interactions, with few polar interactions. |