Structure of Csd3 from Helicobacter pylori, a cell shape-determining metallopeptidase

An, D.R.; Kim, H.S.; Kim, J.; Im, H.N.; Yoon, H.J.; Yoon, J.Y.; Jang, J.Y.; Hesek, D.; Lee, M.; Mobashery, S.; Kim, S.-J.; Lee, B.I.; Suh, S.W.

doi:10.1107/S1399004715000152

Acta Crystallographica Section D
Acta Crystallographica
Section D BIOLOGICAL CRYSTALLOGRAPHY

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Figure 4
LytM domain of Csd3. (a) Two different views of the electrostatic potential surface of the LytM domain of Csd3. The positive and negative electrostatic potentials on the surface are coloured blue and red, respectively. Four loops that form the substrate-binding groove around the Zn²⁺ ion (green sphere) are denoted by loops I–IV. (b) Superposition of LytM domains in four M23B metallopeptidases. The LytM domains of H. pylori Csd3 (red), N. meningitidis NMB0315 (pale green; PDB entry 3slu ), V. cholerae VC0503 (sky blue; PDB entry 2gu1 ) and S. aureus LytM (yellow/orange; PDB entry 1qwy ) are superimposed and shown as ribbon diagrams.

BIOLOGICAL
CRYSTALLOGRAPHY

ISSN: 1399-0047

Volume 71| Part 3| February 2015| Pages 675-686

doi:10.1107/S1399004715000152

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