SEQUENCE SLIDER: expanding polyalanine fragments for phasing with multiple side-chain hypotheses

Borges, R.J.; Meindl, K.; Triviño, J.; Sammito, M.; Medina, A.; Millán, C.; Alcorlo, M.; Hermoso, J.A.; Fontes, M.R.M.; Usón, I.

doi:10.1107/S2059798320000339

Acta Crystallographica Section D
Acta Crystallographica
Section D STRUCTURAL BIOLOGY

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Figure 7
Identity, wMPE and CC versus LLG scoring of SEQUENCE SLIDER (SLIDER) models generated from a partial solution for lipase. (a) Hypotheses from modelling all residues (AllRes) are shown as triangles and initial and polyserine (PolySer) models are shown as stars and crosses, respectively; random models are shown as propellers. (b) Modelling only hydrophobic residues (HydRes) shown as triangles. (c) Expansion results for the top ten LLG models from the SEQUENCE SLIDER runs in (a) and (b).

STRUCTURAL
BIOLOGY

ISSN: 2059-7983

Volume 76| Part 3| March 2020| Pages 221-237

https://doi.org/10.1107/S2059798320000339

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