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Figure 9
Example of the superposition of two small local folds onto complete structures. (a) Superposition by the GESAMT algorithm (purple) and the SSM algorithm (pink) of the library model and the protein with PDB entry 3n1z coloured by chains: chain A, orange; chain B, blue; chain C, green. The fragment contained in the library was extracted from the area represented as blue sticks. (b) Close-up view of the GESAMT superposition. (c) View of the SSM superposition. (d) Superposition between a model from PDB entry 2iou represented as red sticks and the whole structure represented as ribbons (coloured by chain) as determined by the ALEPH algorithm. (e) Stick representation of the superposed atoms.

Journal logoSTRUCTURAL
BIOLOGY
ISSN: 2059-7983
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