The use of local structural similarity of distant homologues for crystallographic model building from a molecular-replacement solution

Chojnowski, G.; Choudhury, K.; Heuser, P.; Sobolev, E.; Pereira, J.; Oezugurel, U.; Lamzin, V.S.

doi:10.1107/S2059798320000455

Acta Crystallographica Section D
Acta Crystallographica
Section D STRUCTURAL BIOLOGY

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Figure 1
The r.m.s.d. thresholds for selecting matched fragments. (a) Distribution of the r.m.s.d. for fragments of 20 residues in length. Alignments with local structural similarity (`positives') and those without (`negatives') are indicated. (b) The F₁ score as a function of the r.m.s.d. threshold for fragments of different lengths.

STRUCTURAL
BIOLOGY

ISSN: 2059-7983

Volume 76| Part 3| March 2020| Pages 248-260

https://doi.org/10.1107/S2059798320000455

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