organic compounds
2-[(Dimethylamino)(phenyl)methyl]benzoic acid
aUniversity of Oxford, Department of Chemistry, Chemistry Research Laboratory, 12 Mansfield Road, Oxford OX1 3TA, England
*Correspondence e-mail: harry.anderson@chemistry.ox.ac.uk
The title compound {systematic name: [(2-carboxylatophenyl)(phenyl)methyl]-N,N-dimethylammonium}, C16H17NO2, crystallizes as a hydrogen-bonded zwitterion.
Comment
The title compound, (I), was prepared as described and shown in the scheme. This compound crystallizes as the zwitterion [(2-carboxylatophenyl)(phenyl)methyl]-N,N-dimethylammonium (Fig. 1). There are infinite chains of hydrogen-bonded molecules, with alternating stereochemistry at C1, running parallel to the crystallographic c axis (Fig. 2). The molecules are connected by hydrogen bonds between N1H and O1 of a neighbouring molecule [N1⋯O1i = 2.670 (3) Å; symmetry code: (i) ]. There also appears to be intramolecular C1—H11⋯O1 hydrogen bonding (Desiraju, 2005), as shown by the C⋯O distance of 2.848 (3) Å. This interaction is strengthened by the increased CH acidity due to the adjacent positively-charged N atom.
Experimental
Dimethylamine (4.7 ml of a 40 wt% solution in water, 35 mmol) and 1-bromo-2-[chloro(phenyl)methyl]benzene, (II) (Katsura et al., 1997) (500 mg, 1.78 mmol), in dimethyl sulfoxide (3.8 ml) were heated at reflux for 24 h. The product was purified by and recrystallisation from dichloromethane/light petroleum to give [(2-bromophenyl)(phenyl)methyl]-N,N-dimethylamine, (III), as a white crystalline solid (234 mg, 45%, m.p. 333 K). Butyllithium (0.86 ml of 1.6 M hexane solution, 1.38 mmol) was added dropwise to a solution of (III) (200 mg, 0.69 mmol) in anhydrous tetrahydrofuran (4 ml) at 195 K and stirred for 2 h. The reaction mixture was warmed to room temperature whilst dry carbon dioxide was bubbled through the solution for a further 2 h. Water (5 ml) and acetic acid (0.13 ml, 2.27 mmol) were added until a pH of 7 was achieved. The product was purified by (2:25 methanol–dichloromethane) to yield (I) as colourless crystals (136 mg, 77%). Crystals suitable for single-crystal X-ray were obtained by slow evaporation of a solution in propan-2-ol.
Crystal data
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Refinement
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A Chebychev polynomial (Carruthers & Watkin, 1979; Prince, 1982) was used in the weighting scheme, [weight] = 1.0/[A0T0(x) + A1T1(x) + ⋯ + An−1Tn−1(x)], where Ai are the Chebychev coefficients 0.491, 0.269 and 0.192, and x = F/Fmax; robust weighting (Prince, 1982) W = [weight] [1 − (δF/6σF)2]2. The N-bound H atom was located in a difference Fourier map and its coordinates and isotropic displacement parameter subsequently refined. Other H atoms were positioned geometrically, with C—H = 1.00 Å and Uiso(H) = 1.2Ueq(C).
Data collection: COLLECT (Nonius, 2000); cell DENZO and SCALEPACK (Otwinowski & Minor, 1997); data reduction: DENZO and SCALEPACK; program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: CRYSTALS (Issue 12; Betteridge et al., 2003); molecular graphics: CrystalMaker (CrystalMaker Software Limited, 2002); software used to prepare material for publication: CRYSTALS.
Supporting information
https://doi.org/10.1107/S1600536805021215/jh6012sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536805021215/jh6012Isup2.hkl
Data collection: COLLECT (Nonius, 2000); cell
DENZO; data reduction: DENZO (Otwinowski & Minor, 1997); program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: CRYSTALS (Issue 12; Betteridge et al., 2003); molecular graphics: Please supply; software used to prepare material for publication: CRYSTALS.C16H17NO2 | Dx = 1.248 Mg m−3 |
Mr = 255.32 | Melting point: 446 K |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
a = 24.5562 (10) Å | Cell parameters from 3144 reflections |
b = 9.2464 (4) Å | θ = 5–27° |
c = 11.9764 (5) Å | µ = 0.08 mm−1 |
β = 91.559 (2)° | T = 150 K |
V = 2718.3 (2) Å3 | Block, colourless |
Z = 8 | 0.32 × 0.18 × 0.14 mm |
F(000) = 1088 |
Nonius KappaCCD diffractometer | 1487 reflections with I > 3σ(I) |
Graphite monochromator | Rint = 0.075 |
ω scans | θmax = 27.5°, θmin = 5.5° |
Absorption correction: multi-scan DENZO and SCALEPACK (Otwinowski & Minor, 1997) | h = −31→31 |
Tmin = 0.97, Tmax = 0.99 | k = −11→12 |
13569 measured reflections | l = −15→15 |
3079 independent reflections |
Refinement on F | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.051 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.058 | Method, part 1, Chebychev polynomial, (Watkin, 1994, Prince, 1982) [weight] = 1.0/[A0*T0(x) + A1*T1(x) ··· + An-1]*Tn-1(x)] where Ai are the Chebychev coefficients listed below and x = F /Fmax Method = Robust Weighting (Prince, 1982) W = [weight] * [1-(deltaF/6*sigmaF)2]2 Ai are: 0.491 0.269 0.192 |
S = 1.14 | (Δ/σ)max = 0.010 |
1487 reflections | Δρmax = 0.25 e Å−3 |
176 parameters | Δρmin = −0.22 e Å−3 |
0 restraints |
Experimental. The material was prepared as described above and recrystallized from propan-2-ol. Additional spectroscopic data before recrystallization: 1H NMR: (400.1 MHz, CDCl3) 2.54(6H, s), 4.82 (1H, s), 7.32–7.42 (6H, m) 7.54 (2H, d, J 7.0), 8.35 (1H, d, J 9.2) 13C NMR: (500.3 MHz, CDCl3) 42.1, 77.2, 128.9, 129.0, 129.2, 129.5, 130.5, 131.5, 134.6, 134.9, 135.7, 136.5, 171.2 HR—MS (ESI-) Found 254.1179 (M—H)-, calc 254.1181 |
Refinement. The large refined displacement parameters for the C atoms C15 and C16 and the variations in the C—C bond lengths of the phenyl group containing these atoms suggest there to be some disorder of this group. Attempts to model this did not lead to any improvement is the agreement with the X-ray data and were abandoned. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.10685 (8) | 0.6128 (2) | 0.37916 (18) | 0.0311 | |
C1 | 0.13544 (10) | 0.4876 (3) | 0.43757 (19) | 0.0320 | |
C2 | 0.10653 (11) | 0.3455 (3) | 0.4112 (2) | 0.0340 | |
C3 | 0.10272 (15) | 0.3000 (3) | 0.2991 (2) | 0.0531 | |
C4 | 0.07689 (17) | 0.1727 (4) | 0.2691 (2) | 0.0608 | |
C5 | 0.05430 (14) | 0.0855 (3) | 0.3492 (3) | 0.0509 | |
C6 | 0.05869 (11) | 0.1276 (3) | 0.4598 (2) | 0.0377 | |
C7 | 0.08438 (10) | 0.2561 (3) | 0.4931 (2) | 0.0298 | |
C8 | 0.08572 (10) | 0.2831 (3) | 0.6193 (2) | 0.0309 | |
O1 | 0.10760 (9) | 0.3985 (2) | 0.65640 (14) | 0.0478 | |
O2 | 0.06552 (8) | 0.1902 (2) | 0.67923 (15) | 0.0430 | |
C9 | 0.13230 (13) | 0.7520 (3) | 0.4138 (3) | 0.0469 | |
C10 | 0.04786 (11) | 0.6172 (3) | 0.4040 (2) | 0.0383 | |
C11 | 0.19555 (11) | 0.4829 (3) | 0.4119 (2) | 0.0391 | |
C12 | 0.23187 (12) | 0.4437 (4) | 0.4950 (3) | 0.0546 | |
C13 | 0.28734 (13) | 0.4357 (4) | 0.4771 (3) | 0.0599 | |
C14 | 0.30757 (13) | 0.4678 (4) | 0.3769 (3) | 0.0563 | |
C15 | 0.27275 (16) | 0.5083 (8) | 0.2933 (4) | 0.1261 | |
C16 | 0.21662 (15) | 0.5157 (8) | 0.3102 (3) | 0.1192 | |
H1 | 0.1090 (13) | 0.608 (4) | 0.293 (3) | 0.064 (10)* | |
H11 | 0.1334 | 0.5033 | 0.5200 | 0.0383* | |
H31 | 0.1191 | 0.3613 | 0.2399 | 0.0637* | |
H41 | 0.0745 | 0.1434 | 0.1887 | 0.0726* | |
H51 | 0.0352 | −0.0062 | 0.3276 | 0.0606* | |
H61 | 0.0429 | 0.0639 | 0.5181 | 0.0450* | |
H91 | 0.1131 | 0.8336 | 0.3747 | 0.0560* | |
H92 | 0.1294 | 0.7641 | 0.4964 | 0.0560* | |
H93 | 0.1716 | 0.7519 | 0.3936 | 0.0560* | |
H101 | 0.0304 | 0.7010 | 0.3641 | 0.0461* | |
H102 | 0.0434 | 0.6284 | 0.4863 | 0.0461* | |
H103 | 0.0301 | 0.5253 | 0.3782 | 0.0461* | |
H121 | 0.2181 | 0.4202 | 0.5707 | 0.0654* | |
H131 | 0.3127 | 0.4057 | 0.5396 | 0.0715* | |
H141 | 0.3476 | 0.4617 | 0.3645 | 0.0676* | |
H151 | 0.2873 | 0.5334 | 0.2185 | 0.1516* | |
H161 | 0.1915 | 0.5452 | 0.2471 | 0.1432* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0302 (11) | 0.0345 (12) | 0.0288 (11) | 0.0031 (9) | 0.0027 (9) | 0.0035 (9) |
C1 | 0.0357 (14) | 0.0352 (14) | 0.0249 (12) | 0.0041 (11) | −0.0008 (10) | 0.0018 (10) |
C2 | 0.0411 (16) | 0.0339 (14) | 0.0268 (13) | 0.0082 (12) | −0.0033 (11) | −0.0021 (11) |
C3 | 0.087 (2) | 0.0444 (18) | 0.0274 (14) | 0.0092 (17) | 0.0003 (15) | 0.0004 (13) |
C4 | 0.107 (3) | 0.0470 (19) | 0.0276 (16) | 0.0114 (19) | −0.0118 (16) | −0.0107 (14) |
C5 | 0.073 (2) | 0.0323 (15) | 0.0464 (17) | 0.0060 (15) | −0.0199 (16) | −0.0091 (14) |
C6 | 0.0441 (16) | 0.0322 (14) | 0.0362 (14) | 0.0067 (12) | −0.0083 (12) | −0.0032 (12) |
C7 | 0.0327 (13) | 0.0302 (13) | 0.0263 (12) | 0.0062 (11) | −0.0035 (10) | −0.0037 (10) |
C8 | 0.0267 (13) | 0.0339 (14) | 0.0319 (13) | 0.0039 (11) | 0.0000 (10) | −0.0004 (11) |
O1 | 0.0654 (13) | 0.0521 (12) | 0.0262 (9) | −0.0242 (11) | 0.0067 (9) | −0.0066 (9) |
O2 | 0.0562 (13) | 0.0393 (11) | 0.0336 (10) | −0.0056 (9) | 0.0027 (9) | 0.0027 (9) |
C9 | 0.0537 (19) | 0.0382 (16) | 0.0481 (18) | −0.0067 (14) | −0.0090 (14) | 0.0059 (13) |
C10 | 0.0343 (15) | 0.0446 (16) | 0.0363 (14) | 0.0062 (12) | 0.0076 (11) | 0.0058 (12) |
C11 | 0.0371 (15) | 0.0432 (16) | 0.0370 (14) | 0.0051 (13) | −0.0005 (12) | 0.0021 (12) |
C12 | 0.0422 (18) | 0.071 (2) | 0.0503 (18) | −0.0075 (16) | −0.0055 (14) | 0.0239 (16) |
C13 | 0.0373 (17) | 0.074 (2) | 0.068 (2) | −0.0047 (16) | −0.0121 (15) | 0.0243 (19) |
C14 | 0.0371 (17) | 0.064 (2) | 0.068 (2) | 0.0096 (16) | 0.0014 (15) | 0.0069 (18) |
C15 | 0.047 (2) | 0.269 (7) | 0.063 (2) | 0.054 (3) | 0.0180 (18) | 0.050 (4) |
C16 | 0.043 (2) | 0.265 (7) | 0.050 (2) | 0.053 (3) | 0.0092 (16) | 0.048 (3) |
N1—C1 | 1.515 (3) | C8—O2 | 1.232 (3) |
N1—C9 | 1.485 (4) | C9—H91 | 1.000 |
N1—C10 | 1.487 (3) | C9—H92 | 1.000 |
N1—H1 | 1.04 (3) | C9—H93 | 1.000 |
C1—C2 | 1.523 (4) | C10—H101 | 1.000 |
C1—C11 | 1.516 (4) | C10—H102 | 1.000 |
C1—H11 | 1.000 | C10—H103 | 1.000 |
C2—C3 | 1.408 (4) | C11—C12 | 1.367 (4) |
C2—C7 | 1.404 (4) | C11—C16 | 1.371 (5) |
C3—C4 | 1.380 (5) | C12—C13 | 1.387 (5) |
C3—H31 | 1.000 | C12—H121 | 1.000 |
C4—C5 | 1.381 (5) | C13—C14 | 1.344 (5) |
C4—H41 | 1.000 | C13—H131 | 1.000 |
C5—C6 | 1.382 (4) | C14—C15 | 1.352 (5) |
C5—H51 | 1.000 | C14—H141 | 1.000 |
C6—C7 | 1.399 (4) | C15—C16 | 1.400 (5) |
C6—H61 | 1.000 | C15—H151 | 1.000 |
C7—C8 | 1.531 (3) | C16—H161 | 1.000 |
C8—O1 | 1.270 (3) | ||
C1—N1—C9 | 110.3 (2) | O1—C8—O2 | 123.7 (2) |
C1—N1—C10 | 111.8 (2) | N1—C9—H91 | 109.466 |
C9—N1—C10 | 109.0 (2) | N1—C9—H92 | 109.467 |
C1—N1—H1 | 112.9 (18) | H91—C9—H92 | 109.476 |
C9—N1—H1 | 106.7 (19) | N1—C9—H93 | 109.466 |
C10—N1—H1 | 106.0 (18) | H91—C9—H93 | 109.475 |
N1—C1—C2 | 110.8 (2) | H92—C9—H93 | 109.476 |
N1—C1—C11 | 111.7 (2) | N1—C10—H101 | 109.467 |
C2—C1—C11 | 112.6 (2) | N1—C10—H102 | 109.467 |
N1—C1—H11 | 108.078 | H101—C10—H102 | 109.475 |
C2—C1—H11 | 107.138 | N1—C10—H103 | 109.467 |
C11—C1—H11 | 106.176 | H101—C10—H103 | 109.476 |
C1—C2—C3 | 118.3 (2) | H102—C10—H103 | 109.476 |
C1—C2—C7 | 123.4 (2) | C1—C11—C12 | 118.7 (2) |
C3—C2—C7 | 118.3 (3) | C1—C11—C16 | 124.5 (2) |
C2—C3—C4 | 121.4 (3) | C12—C11—C16 | 116.8 (3) |
C2—C3—H31 | 119.311 | C11—C12—C13 | 121.7 (3) |
C4—C3—H31 | 119.312 | C11—C12—H121 | 119.141 |
C3—C4—C5 | 120.5 (3) | C13—C12—H121 | 119.143 |
C3—C4—H41 | 119.727 | C12—C13—C14 | 121.0 (3) |
C5—C4—H41 | 119.727 | C12—C13—H131 | 119.500 |
C4—C5—C6 | 118.6 (3) | C14—C13—H131 | 119.501 |
C4—C5—H51 | 120.696 | C13—C14—C15 | 118.7 (3) |
C6—C5—H51 | 120.695 | C13—C14—H141 | 120.636 |
C5—C6—C7 | 122.4 (3) | C15—C14—H141 | 120.636 |
C5—C6—H61 | 118.805 | C14—C15—C16 | 120.8 (4) |
C7—C6—H61 | 118.805 | C14—C15—H151 | 119.615 |
C2—C7—C6 | 118.7 (2) | C16—C15—H151 | 119.613 |
C2—C7—C8 | 126.6 (2) | C11—C16—C15 | 121.0 (3) |
C6—C7—C8 | 114.7 (2) | C11—C16—H161 | 119.509 |
C7—C8—O1 | 118.7 (2) | C15—C16—H161 | 119.513 |
C7—C8—O2 | 117.6 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1i | 1.04 (3) | 1.64 (3) | 2.670 (3) | 176 (3) |
C1—H11···O1 | 1.00 | 2.02 | 2.848 (3) | 139 |
Symmetry code: (i) x, −y+1, z−1/2. |
References
Altomare, A., Cascarano, G., Giacovazzo, C., Guagliardi, A., Burla, M. C., Polidori, G. & Camalli, M. (1994). J. Appl. Cryst. 27, 435. CrossRef Web of Science IUCr Journals Google Scholar
Betteridge, P. W., Cooper, R. I., Prout, K. & Watkin, D. J. (2003). J. Appl. Cryst. 36, 1487. Web of Science CrossRef IUCr Journals Google Scholar
Carruthers, J. R. & Watkin, D. J. (1979). Acta Cryst. A35, 698–699. CrossRef CAS IUCr Journals Web of Science Google Scholar
CrystalMaker Software Limited (2002). CrystalMaker. Version 5.0. CrystalMaker Software Limited, Begbroke Science Park, Building 5, Sandy Lane, Yarnton, Oxfordshire, OX5 1PF, England. Google Scholar
Desiraju, G. R. (2005). Chem. Commun. 2995–3001. Google Scholar
Katsura, Y., Zhang, X. Y., Homma, K., Rice, K. C., Calderon, S. N., Rothman, R. B., Yamamura, H. I., Davis, P., Flippen-Anderson, J. L., Xu, H., Becketts, K., Foltz, E. J. & Porreca, F. J. (1997). J. Med. Chem. 40, 2936–2947. CSD CrossRef CAS PubMed Web of Science Google Scholar
Nonius (2000). COLLECT. Nonius BV, Delft, The Netherlands. Google Scholar
Otwinowski, Z. & Minor, W. (1997). Methods in Enzymology, Vol. 276, Macromolecular Crystallography, Part A, edited by C. W. Carter Jr & R. M. Sweet, pp. 307-326. New York: Academic Press. Google Scholar
Prince, E. (1982). Mathematical Techniques in Crystallography and Material Science. New York: Springer-Verlag. Google Scholar
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