organic compounds
Diethyl 5,5′-thiobis[2-amino-4-(4-fluorophenyl)-1-phenyl-1H-pyrrole-3-carboxylate]
aCollege of Chemistry and Molecular Engineering, Qingdao University of Science and Technology, Qingdao 266042, People's Republic of China
*Correspondence e-mail: liming928@qust.edu.cn
In the title compound, C38H32F2N4O4S, the ethyl chain of the ethoxycarbonyl group displays rotational disorder with site occupancy factors ca 0.6 and 0.4. The S atom lies on a twofold rotation axis. There are both inter- and intramolecular hydrogen bonds in the An intramolecular N—H⋯O hydrogen bond forms a six-membered ring, while an intermolecular N—H⋯F hydrogen bond results in a chain.
Related literature
For related literature, see: Yin & Pidgeon (1997); Herradura et al. (2000); Baumgarten & Tyutyulkov (1998); Barton & Ollis (1979).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 1998); cell SAINT (Bruker, 1999); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Bruker, 1999); software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536807061545/at2503sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536807061545/at2503Isup2.hkl
A mixture of 2-(4-fluorophenyl)-2-oxo-N-phenylethanethioamide (3 mmol, 0.819 g), ethyl 2-cyanoacetate (3 mmol, 0.339 g), 10% NaOH solution (0.5 ml), and 15 ml e thanol in a 25 ml flask was stirred for 3 h at room temperature (monitored by TLC). The yellow solid was got by filtering. And then the solid was added to a stirred solution of acetic acid (1 ml) in ethanol (15 ml) at 313 K under MW for 30 min. After cooling to room temperature, the solid product was then got by filtering. The pure product was purified by recrystallization from ethanol (m.p. 498 K).
All H atoms were placed in calculated positions, with C—H distances in the range 0.93 - 0.97 Å, and N—H = 0.90 Å and included in the final cycles of
using a riding model, with Uiso(H) = 1.2 or 1.5Ueq(C,N). The ethyl chain of the ethoxycarbonyl group displays rotational disorder. The site-occupation factors of the disordered atoms C12, C13 and C12', C13' refined to 0.588 (14) and 0.412 (146), respectively.Organic
represent important building blocks in organic and medicinal chemistry (Barton et al., 1979) due to their diverse biological and pharmacological properties (Herradura et al., 2000). Because of their synthetic and biological potential, considerable interest has been focused on the synthesis of organic (Yin et al., 1997). In addition, polysubstituted pyrroles are molecular frameworks having immense importance in material science (Baumgarten et al., 1998). In order to develop new biological activities, we synthesized the title compound, (I) (Fig.1), the structure of which is reported here.The title compound adopts a V conformation, which contains two parts which are same to each other, and each part comprises three rings, two phenyl rings and one pyrrole ring. In each part, the two phenyl rings are not conjugated with the pyrrole ring, with the dihedral angle of 49.07° and 73.04°, respectively.
All the bond lengths and angles (Table 1) in the title compound are within the normal range. The bond lengths of C7—C8 (1.356 Å) and C9—C10 (1.380 Å) in the pyrrole ring is obviously shorter than C—C (1.52 Å) but are close to normal C?C (1.32 Å), it is indicated that they are both C?C. The bond length of C7—C10 (1.454 Å) is between C—C and C?C.
X-ray analysis reveals that there exists both intermolecular hydrogen and intromolecular hydrogen bonds in the
(Fig. 2). The intromolecular N2—H2B···O1 hydrogen bond forms a six-membered ring, while the intermolecular N2—H2A···F1 hydrogen bond makes the molecule extended in line.For related literature, see: Yin & Pidgeon (1997); Herradura et al. (2000); Baumgarten & Tyutyulkov (1998); Barton & Ollis (1979).
Data collection: SMART (Bruker, 1998); cell
SAINT (Bruker, 1999); data reduction: SAINT (Bruker, 1999); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Bruker, 1999); software used to prepare material for publication: SHELXTL (Bruker, 1999).C38H32F2N4O4S | F(000) = 1416 |
Mr = 678.74 | Dx = 1.353 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 1735 reflections |
a = 12.158 (3) Å | θ = 2.6–21.3° |
b = 19.160 (4) Å | µ = 0.16 mm−1 |
c = 14.958 (3) Å | T = 294 K |
β = 106.944 (4)° | Prism, yellow |
V = 3333.0 (13) Å3 | 0.20 × 0.18 × 0.18 mm |
Z = 4 |
Bruker SMART CCD area-detector diffractometer | 2942 independent reflections |
Radiation source: fine-focus sealed tube | 1645 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.045 |
phi and ω scans | θmax = 25.0°, θmin = 2.1° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −14→8 |
Tmin = 0.970, Tmax = 0.973 | k = −22→21 |
8487 measured reflections | l = −17→17 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.047 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.135 | H-atom parameters constrained |
S = 1.08 | w = 1/[σ2(Fo2) + (0.060P)2] where P = (Fo2 + 2Fc2)/3 |
2942 reflections | (Δ/σ)max = 0.001 |
241 parameters | Δρmax = 0.23 e Å−3 |
31 restraints | Δρmin = −0.16 e Å−3 |
C38H32F2N4O4S | V = 3333.0 (13) Å3 |
Mr = 678.74 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 12.158 (3) Å | µ = 0.16 mm−1 |
b = 19.160 (4) Å | T = 294 K |
c = 14.958 (3) Å | 0.20 × 0.18 × 0.18 mm |
β = 106.944 (4)° |
Bruker SMART CCD area-detector diffractometer | 2942 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1645 reflections with I > 2σ(I) |
Tmin = 0.970, Tmax = 0.973 | Rint = 0.045 |
8487 measured reflections |
R[F2 > 2σ(F2)] = 0.047 | 31 restraints |
wR(F2) = 0.135 | H-atom parameters constrained |
S = 1.08 | Δρmax = 0.23 e Å−3 |
2942 reflections | Δρmin = −0.16 e Å−3 |
241 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
S1 | 0.0000 | 0.02157 (5) | 0.2500 | 0.0518 (3) | |
F1 | 0.41195 (19) | −0.13211 (10) | 0.15342 (15) | 0.1094 (7) | |
O1 | 0.0803 (2) | 0.21900 (12) | −0.06429 (16) | 0.0943 (8) | |
O2 | 0.1802 (2) | 0.11943 (13) | −0.04003 (15) | 0.0918 (8) | |
N1 | −0.0635 (2) | 0.13810 (11) | 0.13685 (14) | 0.0495 (6) | |
N2 | −0.0895 (2) | 0.23284 (12) | 0.02943 (17) | 0.0715 (8) | |
H2A | −0.1284 | 0.2575 | 0.0614 | 0.086* | |
H2B | −0.0521 | 0.2595 | −0.0014 | 0.086* | |
C1 | 0.2891 (3) | 0.04044 (15) | 0.13523 (18) | 0.0581 (8) | |
H1 | 0.3128 | 0.0867 | 0.1378 | 0.070* | |
C2 | 0.3696 (3) | −0.01205 (18) | 0.14655 (19) | 0.0669 (9) | |
H2 | 0.4470 | −0.0017 | 0.1566 | 0.080* | |
C3 | 0.3327 (3) | −0.08003 (18) | 0.1426 (2) | 0.0680 (9) | |
C4 | 0.2211 (3) | −0.09736 (16) | 0.1275 (2) | 0.0687 (9) | |
H4 | 0.1986 | −0.1439 | 0.1249 | 0.082* | |
C5 | 0.1410 (3) | −0.04417 (14) | 0.11607 (17) | 0.0555 (8) | |
H5 | 0.0638 | −0.0554 | 0.1055 | 0.067* | |
C6 | 0.1734 (2) | 0.02548 (14) | 0.12005 (16) | 0.0458 (7) | |
C7 | 0.0855 (2) | 0.07966 (13) | 0.11175 (17) | 0.0460 (7) | |
C8 | 0.0077 (2) | 0.07882 (13) | 0.16089 (17) | 0.0455 (7) | |
C9 | −0.0292 (3) | 0.17553 (14) | 0.07162 (18) | 0.0532 (8) | |
C10 | 0.0626 (3) | 0.14193 (14) | 0.05373 (18) | 0.0518 (7) | |
C11 | 0.1072 (3) | 0.16536 (19) | −0.0206 (2) | 0.0672 (9) | |
C12 | 0.2371 (9) | 0.1505 (5) | −0.1060 (7) | 0.079 (3) | 0.588 (14) |
H12A | 0.2721 | 0.1950 | −0.0832 | 0.094* | 0.588 (14) |
H12B | 0.1829 | 0.1570 | −0.1674 | 0.094* | 0.588 (14) |
C13 | 0.3270 (9) | 0.0970 (6) | −0.1087 (6) | 0.095 (3) | 0.588 (14) |
H13A | 0.3698 | 0.1129 | −0.1496 | 0.142* | 0.588 (14) |
H13B | 0.2903 | 0.0535 | −0.1312 | 0.142* | 0.588 (14) |
H13C | 0.3783 | 0.0907 | −0.0469 | 0.142* | 0.588 (14) |
C12' | 0.2111 (9) | 0.1190 (9) | −0.1291 (6) | 0.080 (4) | 0.412 (14) |
H12C | 0.1642 | 0.1513 | −0.1743 | 0.095* | 0.412 (14) |
H12D | 0.2047 | 0.0727 | −0.1563 | 0.095* | 0.412 (14) |
C13' | 0.3355 (12) | 0.1429 (10) | −0.0939 (9) | 0.113 (5) | 0.412 (14) |
H13D | 0.3671 | 0.1462 | −0.1456 | 0.170* | 0.412 (14) |
H13E | 0.3791 | 0.1099 | −0.0493 | 0.170* | 0.412 (14) |
H13F | 0.3388 | 0.1878 | −0.0648 | 0.170* | 0.412 (14) |
C14 | −0.1757 (3) | 0.14464 (15) | 0.14982 (18) | 0.0524 (7) | |
C15 | −0.2597 (3) | 0.09787 (17) | 0.1047 (2) | 0.0688 (9) | |
H15 | −0.2425 | 0.0621 | 0.0690 | 0.083* | |
C16 | −0.3690 (3) | 0.1044 (2) | 0.1128 (2) | 0.0853 (11) | |
H16 | −0.4256 | 0.0726 | 0.0827 | 0.102* | |
C17 | −0.3948 (4) | 0.1564 (3) | 0.1640 (3) | 0.0874 (12) | |
H17 | −0.4694 | 0.1605 | 0.1682 | 0.105* | |
C18 | −0.3129 (4) | 0.2029 (2) | 0.2097 (3) | 0.0886 (12) | |
H18 | −0.3316 | 0.2384 | 0.2452 | 0.106* | |
C19 | −0.2004 (3) | 0.19735 (16) | 0.2033 (2) | 0.0741 (10) | |
H19 | −0.1438 | 0.2287 | 0.2345 | 0.089* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0657 (8) | 0.0467 (6) | 0.0470 (6) | 0.000 | 0.0226 (5) | 0.000 |
F1 | 0.1062 (17) | 0.0986 (14) | 0.1301 (17) | 0.0439 (14) | 0.0450 (15) | 0.0001 (13) |
O1 | 0.110 (2) | 0.0893 (16) | 0.0968 (17) | 0.0169 (15) | 0.0499 (16) | 0.0455 (14) |
O2 | 0.0972 (19) | 0.1199 (19) | 0.0773 (15) | 0.0303 (16) | 0.0551 (15) | 0.0414 (14) |
N1 | 0.0517 (15) | 0.0512 (13) | 0.0475 (13) | 0.0019 (12) | 0.0175 (12) | 0.0028 (11) |
N2 | 0.091 (2) | 0.0552 (15) | 0.0735 (16) | 0.0113 (15) | 0.0327 (16) | 0.0166 (13) |
C1 | 0.059 (2) | 0.0615 (18) | 0.0543 (18) | −0.0052 (18) | 0.0178 (16) | −0.0033 (14) |
C2 | 0.052 (2) | 0.089 (2) | 0.061 (2) | 0.005 (2) | 0.0178 (17) | 0.0000 (18) |
C3 | 0.076 (3) | 0.070 (2) | 0.061 (2) | 0.026 (2) | 0.0260 (19) | −0.0023 (17) |
C4 | 0.085 (3) | 0.0581 (19) | 0.068 (2) | 0.000 (2) | 0.031 (2) | −0.0103 (16) |
C5 | 0.059 (2) | 0.0592 (19) | 0.0512 (17) | −0.0006 (17) | 0.0206 (15) | −0.0082 (14) |
C6 | 0.0503 (18) | 0.0531 (17) | 0.0353 (14) | −0.0031 (15) | 0.0147 (13) | −0.0013 (12) |
C7 | 0.0507 (18) | 0.0471 (16) | 0.0380 (14) | −0.0035 (14) | 0.0094 (13) | −0.0042 (12) |
C8 | 0.0503 (18) | 0.0468 (15) | 0.0399 (15) | 0.0003 (14) | 0.0139 (14) | −0.0007 (12) |
C9 | 0.066 (2) | 0.0473 (16) | 0.0453 (16) | −0.0019 (16) | 0.0141 (16) | 0.0030 (13) |
C10 | 0.061 (2) | 0.0505 (16) | 0.0451 (16) | −0.0028 (15) | 0.0181 (15) | 0.0061 (13) |
C11 | 0.063 (2) | 0.078 (2) | 0.062 (2) | −0.0014 (19) | 0.0203 (18) | 0.0137 (18) |
C12 | 0.086 (6) | 0.093 (6) | 0.068 (5) | −0.005 (5) | 0.039 (4) | 0.013 (4) |
C13 | 0.098 (6) | 0.118 (6) | 0.089 (5) | 0.016 (5) | 0.059 (4) | 0.013 (4) |
C12' | 0.097 (7) | 0.081 (7) | 0.073 (6) | −0.022 (6) | 0.044 (5) | 0.008 (5) |
C13' | 0.101 (8) | 0.126 (9) | 0.121 (8) | −0.026 (7) | 0.046 (6) | −0.009 (7) |
C14 | 0.063 (2) | 0.0549 (17) | 0.0414 (15) | 0.0123 (16) | 0.0187 (15) | 0.0105 (14) |
C15 | 0.070 (2) | 0.078 (2) | 0.062 (2) | −0.007 (2) | 0.0243 (19) | 0.0014 (17) |
C16 | 0.068 (3) | 0.110 (3) | 0.079 (3) | −0.006 (2) | 0.025 (2) | 0.015 (2) |
C17 | 0.072 (3) | 0.114 (3) | 0.083 (3) | 0.023 (3) | 0.032 (2) | 0.036 (2) |
C18 | 0.105 (3) | 0.091 (3) | 0.080 (3) | 0.050 (3) | 0.043 (3) | 0.019 (2) |
C19 | 0.084 (3) | 0.072 (2) | 0.065 (2) | 0.022 (2) | 0.020 (2) | −0.0003 (17) |
S1—C8 | 1.750 (2) | C9—C10 | 1.380 (4) |
S1—C8i | 1.750 (2) | C10—C11 | 1.443 (4) |
F1—C3 | 1.363 (3) | C12—C13 | 1.507 (8) |
O1—C11 | 1.211 (3) | C12—H12A | 0.9700 |
O2—C11 | 1.341 (4) | C12—H12B | 0.9700 |
O2—C12 | 1.484 (6) | C13—H13A | 0.9600 |
O2—C12' | 1.485 (8) | C13—H13B | 0.9600 |
N1—C9 | 1.370 (3) | C13—H13C | 0.9600 |
N1—C8 | 1.409 (3) | C12'—C13' | 1.520 (9) |
N1—C14 | 1.438 (3) | C12'—H12C | 0.9700 |
N2—C9 | 1.368 (3) | C12'—H12D | 0.9700 |
N2—H2A | 0.8989 | C13'—H13D | 0.9600 |
N2—H2B | 0.8954 | C13'—H13E | 0.9600 |
C1—C2 | 1.379 (4) | C13'—H13F | 0.9600 |
C1—C6 | 1.388 (4) | C14—C19 | 1.375 (4) |
C1—H1 | 0.9300 | C14—C15 | 1.378 (4) |
C2—C3 | 1.373 (4) | C15—C16 | 1.375 (4) |
C2—H2 | 0.9300 | C15—H15 | 0.9300 |
C3—C4 | 1.350 (4) | C16—C17 | 1.349 (5) |
C4—C5 | 1.385 (4) | C16—H16 | 0.9300 |
C4—H4 | 0.9300 | C17—C18 | 1.363 (5) |
C5—C6 | 1.388 (4) | C17—H17 | 0.9300 |
C5—H5 | 0.9300 | C18—C19 | 1.403 (5) |
C6—C7 | 1.469 (4) | C18—H18 | 0.9300 |
C7—C8 | 1.356 (3) | C19—H19 | 0.9300 |
C7—C10 | 1.454 (3) | ||
C8—S1—C8i | 102.35 (16) | O2—C12—C13 | 103.1 (6) |
C11—O2—C12 | 110.3 (4) | O2—C12—H12A | 111.1 |
C11—O2—C12' | 123.7 (6) | C13—C12—H12A | 111.1 |
C12—O2—C12' | 28.1 (4) | O2—C12—H12B | 111.1 |
C9—N1—C8 | 108.2 (2) | C13—C12—H12B | 111.1 |
C9—N1—C14 | 123.2 (2) | H12A—C12—H12B | 109.1 |
C8—N1—C14 | 124.8 (2) | C12—C13—H13A | 109.5 |
C9—N2—H2A | 118.1 | C12—C13—H13B | 109.5 |
C9—N2—H2B | 114.3 | H13A—C13—H13B | 109.5 |
H2A—N2—H2B | 113.4 | C12—C13—H13C | 109.5 |
C2—C1—C6 | 121.2 (3) | H13A—C13—H13C | 109.5 |
C2—C1—H1 | 119.4 | H13B—C13—H13C | 109.5 |
C6—C1—H1 | 119.4 | O2—C12'—C13' | 100.0 (9) |
C3—C2—C1 | 118.4 (3) | O2—C12'—H12C | 111.8 |
C3—C2—H2 | 120.8 | C13'—C12'—H12C | 111.8 |
C1—C2—H2 | 120.8 | O2—C12'—H12D | 111.8 |
C4—C3—F1 | 118.7 (3) | C13'—C12'—H12D | 111.8 |
C4—C3—C2 | 122.7 (3) | H12C—C12'—H12D | 109.5 |
F1—C3—C2 | 118.6 (3) | C12'—C13'—H13D | 109.5 |
C3—C4—C5 | 118.4 (3) | C12'—C13'—H13E | 109.5 |
C3—C4—H4 | 120.8 | H13D—C13'—H13E | 109.5 |
C5—C4—H4 | 120.8 | C12'—C13'—H13F | 109.5 |
C4—C5—C6 | 121.4 (3) | H13D—C13'—H13F | 109.5 |
C4—C5—H5 | 119.3 | H13E—C13'—H13F | 109.5 |
C6—C5—H5 | 119.3 | C19—C14—C15 | 120.4 (3) |
C1—C6—C5 | 117.9 (3) | C19—C14—N1 | 121.3 (3) |
C1—C6—C7 | 123.1 (2) | C15—C14—N1 | 118.3 (3) |
C5—C6—C7 | 119.0 (3) | C16—C15—C14 | 119.7 (3) |
C8—C7—C10 | 106.9 (2) | C16—C15—H15 | 120.1 |
C8—C7—C6 | 123.4 (2) | C14—C15—H15 | 120.1 |
C10—C7—C6 | 129.6 (2) | C17—C16—C15 | 120.5 (4) |
C7—C8—N1 | 109.0 (2) | C17—C16—H16 | 119.7 |
C7—C8—S1 | 128.4 (2) | C15—C16—H16 | 119.7 |
N1—C8—S1 | 122.32 (19) | C16—C17—C18 | 120.7 (4) |
N2—C9—N1 | 121.0 (3) | C16—C17—H17 | 119.6 |
N2—C9—C10 | 129.8 (3) | C18—C17—H17 | 119.6 |
N1—C9—C10 | 109.0 (2) | C17—C18—C19 | 120.0 (3) |
C9—C10—C11 | 120.7 (3) | C17—C18—H18 | 120.0 |
C9—C10—C7 | 107.0 (2) | C19—C18—H18 | 120.0 |
C11—C10—C7 | 131.7 (3) | C14—C19—C18 | 118.6 (3) |
O1—C11—O2 | 122.2 (3) | C14—C19—H19 | 120.7 |
O1—C11—C10 | 125.2 (3) | C18—C19—H19 | 120.7 |
O2—C11—C10 | 112.6 (3) | ||
C6—C1—C2—C3 | −0.1 (4) | N2—C9—C10—C7 | −173.8 (3) |
C1—C2—C3—C4 | 0.4 (5) | N1—C9—C10—C7 | 0.2 (3) |
C1—C2—C3—F1 | 179.8 (3) | C8—C7—C10—C9 | 0.0 (3) |
F1—C3—C4—C5 | −179.6 (2) | C6—C7—C10—C9 | 180.0 (3) |
C2—C3—C4—C5 | −0.3 (5) | C8—C7—C10—C11 | −171.0 (3) |
C3—C4—C5—C6 | −0.2 (4) | C6—C7—C10—C11 | 9.0 (5) |
C2—C1—C6—C5 | −0.4 (4) | C12—O2—C11—O1 | 11.3 (7) |
C2—C1—C6—C7 | 177.2 (2) | C12'—O2—C11—O1 | −16.7 (7) |
C4—C5—C6—C1 | 0.5 (4) | C12—O2—C11—C10 | −171.2 (6) |
C4—C5—C6—C7 | −177.2 (2) | C12'—O2—C11—C10 | 160.8 (6) |
C1—C6—C7—C8 | −129.7 (3) | C9—C10—C11—O1 | 9.6 (5) |
C5—C6—C7—C8 | 47.9 (3) | C7—C10—C11—O1 | 179.6 (3) |
C1—C6—C7—C10 | 50.3 (4) | C9—C10—C11—O2 | −167.8 (3) |
C5—C6—C7—C10 | −132.1 (3) | C7—C10—C11—O2 | 2.2 (5) |
C10—C7—C8—N1 | −0.2 (3) | C11—O2—C12—C13 | 171.9 (9) |
C6—C7—C8—N1 | 179.8 (2) | C12'—O2—C12—C13 | −63.9 (13) |
C10—C7—C8—S1 | −173.5 (2) | C11—O2—C12'—C13' | 110.4 (13) |
C6—C7—C8—S1 | 6.5 (4) | C12—O2—C12'—C13' | 41.5 (12) |
C9—N1—C8—C7 | 0.4 (3) | C9—N1—C14—C19 | −82.7 (3) |
C14—N1—C8—C7 | 159.1 (2) | C8—N1—C14—C19 | 121.7 (3) |
C9—N1—C8—S1 | 174.16 (19) | C9—N1—C14—C15 | 95.3 (3) |
C14—N1—C8—S1 | −27.2 (3) | C8—N1—C14—C15 | −60.3 (3) |
C8i—S1—C8—C7 | 128.1 (3) | C19—C14—C15—C16 | 0.5 (4) |
C8i—S1—C8—N1 | −44.36 (16) | N1—C14—C15—C16 | −177.5 (3) |
C8—N1—C9—N2 | 174.3 (2) | C14—C15—C16—C17 | 0.4 (5) |
C14—N1—C9—N2 | 15.2 (4) | C15—C16—C17—C18 | −0.8 (5) |
C8—N1—C9—C10 | −0.4 (3) | C16—C17—C18—C19 | 0.4 (5) |
C14—N1—C9—C10 | −159.5 (2) | C15—C14—C19—C18 | −0.9 (4) |
N2—C9—C10—C11 | −1.6 (5) | N1—C14—C19—C18 | 177.0 (3) |
N1—C9—C10—C11 | 172.5 (2) | C17—C18—C19—C14 | 0.4 (5) |
Symmetry code: (i) −x, y, −z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2A···F1ii | 0.90 | 2.49 | 3.181 (3) | 134 |
N2—H2B···O1 | 0.90 | 2.23 | 2.825 (3) | 124 |
Symmetry code: (ii) x−1/2, y+1/2, z. |
Experimental details
Crystal data | |
Chemical formula | C38H32F2N4O4S |
Mr | 678.74 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 294 |
a, b, c (Å) | 12.158 (3), 19.160 (4), 14.958 (3) |
β (°) | 106.944 (4) |
V (Å3) | 3333.0 (13) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.16 |
Crystal size (mm) | 0.20 × 0.18 × 0.18 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.970, 0.973 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8487, 2942, 1645 |
Rint | 0.045 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.047, 0.135, 1.08 |
No. of reflections | 2942 |
No. of parameters | 241 |
No. of restraints | 31 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.23, −0.16 |
Computer programs: SMART (Bruker, 1998), SAINT (Bruker, 1999), SAINT (Bruker, 1999), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXTL (Bruker, 1999), SHELXTL (Bruker, 1999).
S1—C8 | 1.750 (2) | N1—C8 | 1.409 (3) |
F1—C3 | 1.363 (3) | N1—C14 | 1.438 (3) |
N1—C9 | 1.370 (3) | N2—C9 | 1.368 (3) |
C8—S1—C8i | 102.35 (16) |
Symmetry code: (i) −x, y, −z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2A···F1ii | 0.90 | 2.49 | 3.181 (3) | 133.7 |
N2—H2B···O1 | 0.90 | 2.23 | 2.825 (3) | 123.8 |
Symmetry code: (ii) x−1/2, y+1/2, z. |
Acknowledgements
This project was supported by the National Science Foundation of China (No. 20572057), the Natural Science Foundation of Shandong Province (Y2006B11) and the Doctoral Foundation of Qingdao University of Science and Technology.
References
Barton, D. H. R. & Ollis, W. D. (1979). Comprehensive Organic Chemistry, Vol. 3, p. 33. Oxford: Pergamon Press. Google Scholar
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Organic sulfides represent important building blocks in organic and medicinal chemistry (Barton et al., 1979) due to their diverse biological and pharmacological properties (Herradura et al., 2000). Because of their synthetic and biological potential, considerable interest has been focused on the synthesis of organic sulfides (Yin et al., 1997). In addition, polysubstituted pyrroles are molecular frameworks having immense importance in material science (Baumgarten et al., 1998). In order to develop new biological activities, we synthesized the title compound, (I) (Fig.1), the structure of which is reported here.
The title compound adopts a V conformation, which contains two parts which are same to each other, and each part comprises three rings, two phenyl rings and one pyrrole ring. In each part, the two phenyl rings are not conjugated with the pyrrole ring, with the dihedral angle of 49.07° and 73.04°, respectively.
All the bond lengths and angles (Table 1) in the title compound are within the normal range. The bond lengths of C7—C8 (1.356 Å) and C9—C10 (1.380 Å) in the pyrrole ring is obviously shorter than C—C (1.52 Å) but are close to normal C?C (1.32 Å), it is indicated that they are both C?C. The bond length of C7—C10 (1.454 Å) is between C—C and C?C.
X-ray analysis reveals that there exists both intermolecular hydrogen and intromolecular hydrogen bonds in the crystal structure (Fig. 2). The intromolecular N2—H2B···O1 hydrogen bond forms a six-membered ring, while the intermolecular N2—H2A···F1 hydrogen bond makes the molecule extended in line.