organic compounds
N2,N2′-Bis(3-nitrobenzylidene)pyridine-2,6-dicarbohydrazide dimethylformamide disolvate trihydrate
aKey Laboratory of Catalysis and Materials Science of Hubei Provence, College of Chemistry and Materials Science, South Central University of Nationalities, Wuhan 430074, People's Republic of China
*Correspondence e-mail: liuhwchem@mail.scuec.edu.cn
In the title compound, C21H15N7O6·2C3H7NO·3H2O, the N2,N2′-bis(3-nitrobenzylidene)pyridine-2,6-dicarbohydrazide and one water molecule are located on a twofold rotation axis. The molecules are connected by hydrogen bonds. One dimethylformamide molecule is disordered over two positions; the site occupancy factors are ca 0.8 and 0.2.
Related literature
Tridentate ligands with 2,6-dipicolinoyhydrazone have been intensively studied due to their interesting coordination modes (Paolucci et al., 1985; Chen et al., 1996, 1997).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2001); cell SAINT-Plus (Bruker, 2001); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: PLATON (Spek, 2003); software used to prepare material for publication: SHELXTL (Bruker, 2001).
Supporting information
https://doi.org/10.1107/S1600536807056607/bt2593sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536807056607/bt2593Isup2.hkl
To a solution of 3-nitrobenzaldehyde (1.66 g, 11 mmol) in absolute ethanol (40 ml) a suspension of 2,6-dipicolinoyhydrazine in the same solvent (50 ml) was added at 353 K. The mixture was left to react at reflux for 10 h, then the pale yellow product was filtered, washed with hot ethanol (20 ml portion) three times and dried in vacuo. Crystals suitable for X-ray diffraction were obtained from dimethylformamide-methanol (3:1 v/v) over a period of about three weeks. Melting point: 601 K.
Corresponding distances and angles of the disordered DMF molecule, were restrained to be equal. Their anisotropic displacement parameters were restrained to an isotropic shape.
of the site-occupancy factors for the two components gave values of 0.78 (1) and 0.22 (1) for the major and minor components. All the H atoms bonded to C atoms were set to ideal geometrical positions with C–H ranging from 0.93Å to 0.96Å and with Uiso(H) =1.2Ueq(aromatic C) or 1.5Ueq(methyl C). Coordinates of the H atoms bonded to N or O atoms were refined with Uiso(H) =1.2Ueq(N) or 1.5Ueq(O), respectively.In recent years,
possessing different donor atoms or cavities, have been investigated due to their coordinating capability and some biological activities, especially in bis-arylhydrazones. (Paolucci et al., 1985; Chen et al., 1996, 1997) 2,6-dipicolinoylhydrazine as a multidentate ligand is very useful for the research of coordination modes. As part of our continuing studies of the structures of we report here the synthesis and of a novel tridentate ligand. One water molecule is inserted in the cavity of the hydrazone, each of the remaining water molecules and dimethylformamide solvents are located at the two sides of pyridyl ring. N, N-dimethylformamide molecules are disordered over two sites with unequal occupancy (Figure 1). In the title compound (I), the two spacer units (one is from atom C1 to C6, another is from atom C1a to C6a.) adopt a nearly planar all-trans conformation. The pyridyl ring is effectively coplanar with two spacer units. The two independent aryl rings are essentially coplanar with these spacer units, while the nitro-groups are slightly twisted out of the plane of these spacer units. The independent molecular components are linked by hydrogen bonds.Tridentate ligands with 2,6-dipicolinoyhydrazone have been intensively studied due to their interesting coordination modes (Paolucci et al., 1985; Chen et al., 1996, 1997).
Data collection: SMART (Bruker 2001); cell
SAINT-Plus (Bruker 2001); data reduction: SAINT-Plus (Bruker 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: PLATON (Spek, 2003); software used to prepare material for publication: SHELXTL (Bruker 2001).Fig. 1. The molecular structure of the title compound with displacement ellipsoids drawn at the 50% probability level. Dashed lines indicate hydrogen bonds. |
C21H15N7O6·2C3H7NO·3H2O | F(000) = 1392 |
Mr = 661.64 | Dx = 1.358 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 2433 reflections |
a = 24.704 (3) Å | θ = 2.4–24.1° |
b = 10.4815 (12) Å | µ = 0.11 mm−1 |
c = 14.4792 (16) Å | T = 273 K |
β = 120.355 (2)° | Block, pale yellow |
V = 3235.2 (6) Å3 | 0.22 × 0.20 × 0.20 mm |
Z = 4 |
Bruker SMART CCD area-detector diffractometer | 3170 independent reflections |
Radiation source: fine-focus sealed tube | 2222 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.018 |
phi and ω scans | θmax = 26.0°, θmin = 2.2° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2001) | h = −30→30 |
Tmin = 0.977, Tmax = 0.979 | k = −12→12 |
9211 measured reflections | l = −17→17 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.049 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.169 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | w = 1/[σ2(Fo2) + (0.1056P)2 + 0.1192P] where P = (Fo2 + 2Fc2)/3 |
3170 reflections | (Δ/σ)max < 0.001 |
272 parameters | Δρmax = 0.43 e Å−3 |
51 restraints | Δρmin = −0.17 e Å−3 |
C21H15N7O6·2C3H7NO·3H2O | V = 3235.2 (6) Å3 |
Mr = 661.64 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 24.704 (3) Å | µ = 0.11 mm−1 |
b = 10.4815 (12) Å | T = 273 K |
c = 14.4792 (16) Å | 0.22 × 0.20 × 0.20 mm |
β = 120.355 (2)° |
Bruker SMART CCD area-detector diffractometer | 3170 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2001) | 2222 reflections with I > 2σ(I) |
Tmin = 0.977, Tmax = 0.979 | Rint = 0.018 |
9211 measured reflections |
R[F2 > 2σ(F2)] = 0.049 | 51 restraints |
wR(F2) = 0.169 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | Δρmax = 0.43 e Å−3 |
3170 reflections | Δρmin = −0.17 e Å−3 |
272 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
C1 | 0.02389 (8) | 0.81428 (16) | 0.20004 (15) | 0.0577 (5) | |
C2 | 0.02453 (11) | 0.94590 (19) | 0.1985 (2) | 0.0813 (7) | |
H2 | 0.0415 | 0.9888 | 0.1627 | 0.098* | |
C3 | 0.0000 | 1.0127 (3) | 0.2500 | 0.0923 (11) | |
H3 | 0.0000 | 1.1015 | 0.2500 | 0.111* | |
C4 | 0.05053 (9) | 0.74204 (17) | 0.14262 (16) | 0.0583 (5) | |
C5 | 0.07425 (8) | 0.42180 (18) | 0.11595 (15) | 0.0603 (5) | |
H5 | 0.0574 | 0.3909 | 0.1562 | 0.072* | |
C6 | 0.09827 (8) | 0.33080 (17) | 0.06894 (15) | 0.0563 (5) | |
C7 | 0.09512 (10) | 0.20133 (19) | 0.08487 (19) | 0.0724 (6) | |
H7 | 0.0777 | 0.1746 | 0.1255 | 0.087* | |
C8 | 0.11679 (11) | 0.11154 (19) | 0.0428 (2) | 0.0797 (7) | |
H8 | 0.1135 | 0.0253 | 0.0543 | 0.096* | |
C9 | 0.14336 (10) | 0.1483 (2) | −0.01612 (18) | 0.0739 (6) | |
H9 | 0.1585 | 0.0882 | −0.0447 | 0.089* | |
C10 | 0.14703 (8) | 0.27662 (19) | −0.03173 (15) | 0.0601 (5) | |
C11 | 0.12441 (8) | 0.36987 (18) | 0.00764 (15) | 0.0562 (5) | |
H11 | 0.1265 | 0.4558 | −0.0062 | 0.067* | |
N1 | 0.0000 | 0.74859 (17) | 0.2500 | 0.0504 (5) | |
N2 | 0.05128 (7) | 0.61435 (14) | 0.15307 (13) | 0.0569 (4) | |
H2A | 0.0369 (9) | 0.573 (2) | 0.1909 (17) | 0.068* | |
N3 | 0.07557 (7) | 0.54085 (15) | 0.10391 (12) | 0.0569 (4) | |
N4 | 0.17601 (8) | 0.3184 (2) | −0.09403 (15) | 0.0781 (5) | |
O1 | 0.06961 (7) | 0.79807 (14) | 0.09078 (13) | 0.0815 (5) | |
O2 | 0.18130 (10) | 0.4303 (2) | −0.10546 (17) | 0.1116 (7) | |
O3 | 0.19383 (10) | 0.2370 (2) | −0.13148 (17) | 0.1126 (7) | |
O5 | 0.0000 | 0.44674 (18) | 0.2500 | 0.0710 (6) | |
H5A | 0.0265 (11) | 0.402 (2) | 0.3000 (19) | 0.107* | |
O6 | 0.07737 (13) | 0.7056 (2) | −0.08613 (17) | 0.1214 (8) | |
H6A | 0.070 (2) | 0.726 (4) | −0.040 (3) | 0.182* | |
H6B | 0.1015 (18) | 0.756 (3) | −0.094 (4) | 0.182* | |
C12 | 0.18750 (15) | 0.7702 (3) | −0.1301 (2) | 0.0744 (9) | 0.781 (4) |
H12A | 0.1756 | 0.6860 | −0.1300 | 0.089* | 0.781 (4) |
C13 | 0.2617 (2) | 0.6854 (4) | −0.1750 (4) | 0.1137 (14) | 0.781 (4) |
H13A | 0.2487 | 0.6065 | −0.1586 | 0.171* | 0.781 (4) |
H13B | 0.3065 | 0.6928 | −0.1325 | 0.171* | 0.781 (4) |
H13C | 0.2491 | 0.6871 | −0.2495 | 0.171* | 0.781 (4) |
C14 | 0.2445 (2) | 0.9163 (4) | −0.1734 (4) | 0.1282 (17) | 0.781 (4) |
H14A | 0.2229 | 0.9772 | −0.1541 | 0.192* | 0.781 (4) |
H14B | 0.2301 | 0.9235 | −0.2484 | 0.192* | 0.781 (4) |
H14C | 0.2888 | 0.9327 | −0.1330 | 0.192* | 0.781 (4) |
O4 | 0.1592 (3) | 0.8575 (10) | −0.1098 (8) | 0.096 (2) | 0.781 (4) |
N5 | 0.2325 (5) | 0.7922 (5) | −0.1510 (10) | 0.073 (2) | 0.781 (4) |
C12' | 0.1999 (5) | 0.8886 (10) | −0.1353 (9) | 0.082 (3) | 0.219 (4) |
H12B | 0.2177 | 0.9686 | −0.1109 | 0.099* | 0.219 (4) |
C13' | 0.2179 (6) | 0.6684 (10) | −0.1392 (10) | 0.095 (4) | 0.219 (4) |
H13D | 0.1813 | 0.6642 | −0.1324 | 0.142* | 0.219 (4) |
H13E | 0.2544 | 0.6488 | −0.0716 | 0.142* | 0.219 (4) |
H13F | 0.2141 | 0.6078 | −0.1919 | 0.142* | 0.219 (4) |
C14' | 0.2747 (6) | 0.8196 (17) | −0.1897 (12) | 0.121 (6) | 0.219 (4) |
H14D | 0.2748 | 0.9089 | −0.2045 | 0.181* | 0.219 (4) |
H14E | 0.2695 | 0.7707 | −0.2497 | 0.181* | 0.219 (4) |
H14F | 0.3137 | 0.7973 | −0.1272 | 0.181* | 0.219 (4) |
O4' | 0.1497 (12) | 0.849 (4) | −0.142 (3) | 0.099 (8) | 0.219 (4) |
N5' | 0.2237 (16) | 0.7926 (15) | −0.171 (3) | 0.062 (6) | 0.219 (4) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0639 (10) | 0.0489 (10) | 0.0711 (12) | −0.0025 (8) | 0.0420 (10) | 0.0030 (8) |
C2 | 0.1114 (17) | 0.0489 (11) | 0.1180 (19) | −0.0064 (10) | 0.0832 (16) | 0.0050 (10) |
C3 | 0.136 (3) | 0.0412 (15) | 0.138 (3) | 0.000 | 0.097 (3) | 0.000 |
C4 | 0.0662 (11) | 0.0531 (11) | 0.0706 (12) | −0.0024 (8) | 0.0455 (10) | 0.0034 (8) |
C5 | 0.0680 (11) | 0.0576 (11) | 0.0738 (13) | 0.0000 (8) | 0.0493 (10) | 0.0025 (9) |
C6 | 0.0582 (10) | 0.0519 (10) | 0.0657 (11) | 0.0016 (8) | 0.0363 (9) | 0.0012 (8) |
C7 | 0.0847 (13) | 0.0597 (12) | 0.0920 (15) | 0.0015 (10) | 0.0589 (13) | 0.0080 (10) |
C8 | 0.0949 (15) | 0.0510 (11) | 0.1070 (18) | 0.0048 (10) | 0.0612 (15) | 0.0002 (10) |
C9 | 0.0766 (13) | 0.0655 (13) | 0.0842 (15) | 0.0101 (10) | 0.0441 (12) | −0.0066 (10) |
C10 | 0.0562 (10) | 0.0695 (12) | 0.0600 (11) | 0.0031 (8) | 0.0334 (9) | −0.0026 (9) |
C11 | 0.0557 (10) | 0.0547 (10) | 0.0615 (11) | 0.0002 (7) | 0.0319 (9) | −0.0001 (8) |
N1 | 0.0563 (11) | 0.0434 (10) | 0.0603 (12) | 0.000 | 0.0359 (10) | 0.000 |
N2 | 0.0685 (9) | 0.0526 (9) | 0.0702 (10) | 0.0018 (7) | 0.0503 (9) | 0.0019 (7) |
N3 | 0.0634 (9) | 0.0556 (9) | 0.0663 (9) | 0.0017 (7) | 0.0434 (8) | −0.0011 (7) |
N4 | 0.0780 (11) | 0.0949 (14) | 0.0733 (12) | 0.0066 (10) | 0.0469 (10) | −0.0077 (10) |
O1 | 0.1125 (12) | 0.0662 (9) | 0.1074 (12) | −0.0021 (8) | 0.0861 (11) | 0.0069 (7) |
O2 | 0.1550 (18) | 0.0978 (14) | 0.1371 (17) | −0.0115 (12) | 0.1145 (15) | 0.0072 (11) |
O3 | 0.1362 (16) | 0.1242 (15) | 0.1246 (16) | 0.0128 (12) | 0.1007 (15) | −0.0147 (12) |
O5 | 0.0975 (16) | 0.0544 (12) | 0.0868 (15) | 0.000 | 0.0654 (13) | 0.000 |
O6 | 0.1643 (19) | 0.1363 (18) | 0.1002 (14) | −0.0651 (14) | 0.0939 (14) | −0.0337 (12) |
C12 | 0.090 (2) | 0.0651 (18) | 0.080 (2) | −0.0044 (15) | 0.0518 (17) | −0.0003 (14) |
C13 | 0.114 (3) | 0.124 (3) | 0.128 (3) | 0.012 (2) | 0.080 (3) | −0.008 (2) |
C14 | 0.152 (4) | 0.118 (3) | 0.138 (3) | −0.064 (3) | 0.091 (3) | −0.016 (3) |
O4 | 0.119 (3) | 0.088 (2) | 0.120 (6) | 0.003 (3) | 0.090 (4) | −0.002 (3) |
N5 | 0.073 (3) | 0.085 (3) | 0.071 (6) | −0.0111 (18) | 0.044 (4) | −0.0078 (18) |
C12' | 0.094 (6) | 0.074 (6) | 0.098 (7) | −0.016 (5) | 0.063 (5) | −0.008 (5) |
C13' | 0.092 (7) | 0.077 (7) | 0.105 (8) | 0.010 (6) | 0.043 (6) | −0.016 (6) |
C14' | 0.104 (8) | 0.175 (14) | 0.133 (10) | −0.008 (8) | 0.096 (8) | −0.035 (9) |
O4' | 0.103 (9) | 0.126 (13) | 0.088 (13) | 0.006 (8) | 0.063 (8) | 0.002 (9) |
N5' | 0.064 (9) | 0.083 (9) | 0.043 (8) | −0.004 (6) | 0.030 (7) | −0.001 (5) |
C1—N1 | 1.333 (2) | N4—O2 | 1.202 (3) |
C1—C2 | 1.380 (3) | O5—O6 | 6.641 (2) |
C1—C4 | 1.500 (3) | O5—H5A | 0.833 (16) |
C2—C3 | 1.368 (3) | O6—H6A | 0.799 (18) |
C2—H2 | 0.9300 | O6—H6B | 0.843 (18) |
C3—C2i | 1.368 (3) | C12—O4 | 1.272 (10) |
C3—H3 | 0.9300 | C12—N5 | 1.312 (5) |
C4—O1 | 1.220 (2) | C12—H12A | 0.9300 |
C4—N2 | 1.346 (2) | C13—N5 | 1.466 (6) |
C5—N3 | 1.263 (2) | C13—H13A | 0.9600 |
C5—C6 | 1.461 (3) | C13—H13B | 0.9600 |
C5—H5 | 0.9300 | C13—H13C | 0.9600 |
C6—C11 | 1.397 (3) | C14—N5 | 1.408 (6) |
C6—C7 | 1.385 (3) | C14—H14A | 0.9600 |
C7—C8 | 1.369 (3) | C14—H14B | 0.9600 |
C7—H7 | 0.9300 | C14—H14C | 0.9600 |
C8—C9 | 1.368 (3) | C12'—O4' | 1.27 (2) |
C8—H8 | 0.9300 | C12'—N5' | 1.394 (14) |
C9—C10 | 1.375 (3) | C12'—H12B | 0.9300 |
C9—H9 | 0.9300 | C13'—N5' | 1.414 (14) |
C10—C11 | 1.384 (3) | C13'—H13D | 0.9600 |
C10—N4 | 1.473 (3) | C13'—H13E | 0.9600 |
C11—H11 | 0.9300 | C13'—H13F | 0.9600 |
N1—C1i | 1.333 (2) | C14'—N5' | 1.440 (14) |
N2—N3 | 1.376 (2) | C14'—H14D | 0.9600 |
N2—O5 | 2.9082 (19) | C14'—H14E | 0.9600 |
N2—H2A | 0.90 (2) | C14'—H14F | 0.9600 |
N4—O3 | 1.207 (2) | ||
N1—C1—C2 | 122.48 (18) | O2—N4—C10 | 119.66 (18) |
N1—C1—C4 | 118.58 (15) | N2—O5—H5A | 115 (2) |
C2—C1—C4 | 118.93 (17) | O6—O5—H5A | 118 (2) |
C3—C2—C1 | 119.4 (2) | O5—O6—H6B | 146 (3) |
C3—C2—H2 | 120.3 | H6A—O6—H6B | 114 (3) |
C1—C2—H2 | 120.3 | O4—C12—N5 | 123.7 (5) |
C2i—C3—C2 | 118.4 (3) | O4—C12—H12A | 118.2 |
C2i—C3—H3 | 120.8 | N5—C12—H12A | 118.2 |
C2—C3—H3 | 120.8 | N5—C13—H13A | 109.5 |
O1—C4—N2 | 124.07 (17) | N5—C13—H13B | 109.5 |
O1—C4—C1 | 120.80 (16) | H13A—C13—H13B | 109.5 |
N2—C4—C1 | 115.13 (15) | N5—C13—H13C | 109.5 |
N3—C5—C6 | 122.41 (17) | H13A—C13—H13C | 109.5 |
N3—C5—H5 | 118.8 | H13B—C13—H13C | 109.5 |
C6—C5—H5 | 118.8 | N5—C14—H14A | 109.5 |
C11—C6—C7 | 118.41 (17) | N5—C14—H14B | 109.5 |
C11—C6—C5 | 122.13 (16) | H14A—C14—H14B | 109.5 |
C7—C6—C5 | 119.46 (17) | N5—C14—H14C | 109.5 |
C8—C7—C6 | 122.1 (2) | H14A—C14—H14C | 109.5 |
C8—C7—H7 | 118.9 | H14B—C14—H14C | 109.5 |
C6—C7—H7 | 118.9 | C12—N5—C14 | 121.2 (5) |
C7—C8—C9 | 120.19 (19) | C12—N5—C13 | 119.8 (4) |
C7—C8—H8 | 119.9 | C14—N5—C13 | 117.6 (4) |
C9—C8—H8 | 119.9 | O4'—C12'—N5' | 109 (2) |
C10—C9—C8 | 118.04 (19) | O4'—C12'—H12B | 125.7 |
C10—C9—H9 | 121.0 | N5'—C12'—H12B | 125.7 |
C8—C9—H9 | 121.0 | N5'—C13'—H13D | 109.5 |
C9—C10—C11 | 123.34 (19) | N5'—C13'—H13E | 109.5 |
C9—C10—N4 | 118.96 (18) | H13D—C13'—H13E | 109.5 |
C11—C10—N4 | 117.70 (18) | N5'—C13'—H13F | 109.5 |
C6—C11—C10 | 117.86 (17) | H13D—C13'—H13F | 109.5 |
C6—C11—H11 | 121.1 | H13E—C13'—H13F | 109.5 |
C10—C11—H11 | 121.1 | N5'—C14'—H14D | 109.5 |
C1i—N1—C1 | 117.8 (2) | N5'—C14'—H14E | 109.5 |
C4—N2—N3 | 118.92 (15) | H14D—C14'—H14E | 109.5 |
C4—N2—O5 | 132.09 (12) | N5'—C14'—H14F | 109.5 |
N3—N2—O5 | 108.77 (11) | H14D—C14'—H14F | 109.5 |
C4—N2—H2A | 124.1 (13) | H14E—C14'—H14F | 109.5 |
N3—N2—H2A | 117.0 (13) | C14'—N5'—C13' | 119.0 (15) |
C5—N3—N2 | 115.69 (15) | C14'—N5'—C12' | 120.1 (16) |
O3—N4—O2 | 122.6 (2) | C13'—N5'—C12' | 114.2 (14) |
O3—N4—C10 | 117.8 (2) | ||
N1—C1—C2—C3 | 0.1 (3) | C2—C1—N1—C1i | −0.07 (15) |
C4—C1—C2—C3 | 179.59 (17) | C4—C1—N1—C1i | −179.52 (19) |
C1—C2—C3—C2i | −0.07 (14) | O1—C4—N2—N3 | 0.8 (3) |
N1—C1—C4—O1 | 175.80 (17) | C1—C4—N2—N3 | −179.30 (15) |
C2—C1—C4—O1 | −3.7 (3) | O1—C4—N2—O5 | −173.09 (14) |
N1—C1—C4—N2 | −4.1 (2) | C1—C4—N2—O5 | 6.8 (3) |
C2—C1—C4—N2 | 176.45 (18) | C6—C5—N3—N2 | −179.94 (16) |
N3—C5—C6—C11 | 0.1 (3) | C4—N2—N3—C5 | −179.27 (17) |
N3—C5—C6—C7 | −179.70 (17) | O5—N2—N3—C5 | −4.04 (19) |
C11—C6—C7—C8 | 0.1 (3) | C9—C10—N4—O3 | 2.0 (3) |
C5—C6—C7—C8 | 179.9 (2) | C11—C10—N4—O3 | −177.54 (19) |
C6—C7—C8—C9 | 0.8 (4) | C9—C10—N4—O2 | −177.7 (2) |
C7—C8—C9—C10 | −0.4 (4) | C11—C10—N4—O2 | 2.7 (3) |
C8—C9—C10—C11 | −1.0 (3) | C4—N2—O5—O6 | 132.8 (3) |
C8—C9—C10—N4 | 179.4 (2) | N3—N2—O5—O6 | −41.54 (13) |
C7—C6—C11—C10 | −1.4 (3) | O4—C12—N5—C14 | −12.8 (15) |
C5—C6—C11—C10 | 178.74 (17) | O4—C12—N5—C13 | −179.1 (8) |
C9—C10—C11—C6 | 1.9 (3) | O4'—C12'—N5'—C14' | 170 (3) |
N4—C10—C11—C6 | −178.49 (16) | O4'—C12'—N5'—C13' | −39 (4) |
Symmetry code: (i) −x, y, −z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O5—H5A···O6ii | 0.83 (2) | 1.86 (2) | 2.692 (2) | 173 (3) |
C9—H9···O4iii | 0.93 | 2.60 | 3.438 (10) | 150 |
N2—H2A···O5 | 0.90 (2) | 2.03 (2) | 2.9082 (19) | 166.4 (19) |
O6—H6A···O1 | 0.80 (2) | 2.05 (2) | 2.834 (2) | 167 (4) |
O6—H6B···O4 | 0.84 (2) | 1.89 (2) | 2.728 (7) | 175 (4) |
C5—H5···O5 | 0.93 | 2.48 | 3.2860 (18) | 145 |
Symmetry codes: (ii) x, −y+1, z+1/2; (iii) x, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | C21H15N7O6·2C3H7NO·3H2O |
Mr | 661.64 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 273 |
a, b, c (Å) | 24.704 (3), 10.4815 (12), 14.4792 (16) |
β (°) | 120.355 (2) |
V (Å3) | 3235.2 (6) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.11 |
Crystal size (mm) | 0.22 × 0.20 × 0.20 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2001) |
Tmin, Tmax | 0.977, 0.979 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9211, 3170, 2222 |
Rint | 0.018 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.049, 0.169, 1.08 |
No. of reflections | 3170 |
No. of parameters | 272 |
No. of restraints | 51 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.43, −0.17 |
Computer programs: SMART (Bruker 2001), SAINT-Plus (Bruker 2001), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), PLATON (Spek, 2003), SHELXTL (Bruker 2001).
D—H···A | D—H | H···A | D···A | D—H···A |
O5—H5A···O6i | 0.833 (16) | 1.864 (17) | 2.692 (2) | 173 (3) |
C9—H9···O4ii | 0.93 | 2.60 | 3.438 (10) | 150.4 |
N2—H2A···O5 | 0.90 (2) | 2.03 (2) | 2.9082 (19) | 166.4 (19) |
O6—H6A···O1 | 0.799 (18) | 2.05 (2) | 2.834 (2) | 167 (4) |
O6—H6B···O4 | 0.843 (18) | 1.89 (2) | 2.728 (7) | 175 (4) |
C5—H5···O5 | 0.93 | 2.48 | 3.2860 (18) | 145.4 |
Symmetry codes: (i) x, −y+1, z+1/2; (ii) x, y−1, z. |
Acknowledgements
This work was supported by the Science Foundation of the South Central National University (grant No. y2205007) and Hubei Provincial Natural Science Foundation of China (grant No. 2007ABA345)
References
Bruker (2001). SAINT-Plus (Version 6.45), SMART (Version 5.628) and SHELXTL (6.01). Bruker AXS, Inc., Madison, Wisconsin, USA. Google Scholar
Chen, X. Y., Zhan, S. Z., Hu, C. J., Meng, Q. J. & Liu, Y. J. (1997). J. Chem. Soc. Dalton Trans. pp. 245–250. CSD CrossRef CAS Web of Science Google Scholar
Chen, X. Y., Zhan, S. Z. & Meng, Q. J. (1996). Transition Met. Chem. 21, 345–348. CrossRef CAS Web of Science Google Scholar
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In recent years, hydrazones, possessing different donor atoms or cavities, have been investigated due to their coordinating capability and some biological activities, especially in bis-arylhydrazones. (Paolucci et al., 1985; Chen et al., 1996, 1997) 2,6-dipicolinoylhydrazine as a multidentate ligand is very useful for the research of coordination modes. As part of our continuing studies of the structures of hydrazones, we report here the synthesis and crystal structure of a novel tridentate ligand. One water molecule is inserted in the cavity of the hydrazone, each of the remaining water molecules and dimethylformamide solvents are located at the two sides of pyridyl ring. N, N-dimethylformamide molecules are disordered over two sites with unequal occupancy (Figure 1). In the title compound (I), the two spacer units (one is from atom C1 to C6, another is from atom C1a to C6a.) adopt a nearly planar all-trans conformation. The pyridyl ring is effectively coplanar with two spacer units. The two independent aryl rings are essentially coplanar with these spacer units, while the nitro-groups are slightly twisted out of the plane of these spacer units. The independent molecular components are linked by hydrogen bonds.