organic compounds
(E)-Benzoyl[1-(2-hydroxyethyl)imidazolidin-2-ylidene]acetonitrile
aInstitute of Carbon Fiber and Composites, Beijing University of Chemical Technology, Beijing 100029, People's Republic of China, and bLaboratory for Chemical Biology, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100080, People's Republic of China
*Correspondence e-mail: yucy@iccas.ac.cn, tianyh@mail.buct.edu.cn
In the title compound, C14H15N3O2, the C=C(H)—C=O grouping and the imidazolidine ring are coplanar as a result of an intramolecular N—H⋯O hydrogen bond and extended electronic conjugation. Intermolecular N—H⋯O and O—H⋯N hydrogen bonds help to establish the packing.
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Rigaku, 2005); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Bruker, 1997); software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536807055778/hb2622sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536807055778/hb2622Isup2.hkl
The title compound was prepared according to the procedure of Wang & Huang (1996) and recrystallized from methanol in 86% yield to yield colourless prisms of (I) (m.p. 449–450 K). IR: ν= 3400 (OH), 3240 (NH), 2180 (CN), 1580 (CO), 1560, 1545 cm-1. 1H-NMR (DMSO-d6): δ= 9.83 (1H, s), 7.34–7.62 (5H, m), 4.44 (1H, s), 3.56–3.84 p.p.m. (8H, m), 13C-NMR (DMSO-d6): δ= 189.8, 163.6, 140.6, 129.8, 127.6, 127.4, 121.6, 64.5, 59.6, 50.4, 48.9, 41.6 p.p.m.. MS: m/z = 257 (M+, 29),226 (7), 212 (6), 160 (14), 105 (100). Anal. Calcd. for C14H15N3O2: C 65.35, H 5.88, N 16.33; found: C 65.39, H 5.77, N 16.42.
The N– and O-bound H atoms were located in a difference map and freely refined. The C-bound H atoms were placed in geometrically idealized positions (C—H = 0.95–1.00 Å) and refined as riding with Uiso(H) = 1.2Ueq(C).
Heterocyclic ketene β-hydroxyethyl group on the nitrogen atom of the imidazolidine ring, is a member of this family (Wang & Huang, 1996).
(HKAs) are versatile synthons for heterocyclic synthesis. The title compound, (I), (Fig. 1), which possesses aDue to the extended conjugation in the molecule, some abnormal geometrical parameters occur. For example, O2—C8 = 1.2487 (14) Å, which is longer than a normal double bond; the length of N1—C5 [1.3435 (16) Å] and N2—C5 [1.3366 (16) Å] are shorter than those of normal C—N single bonds; the length of C5—C6 [1.4348 (17) Å] double bond is longer than that of a normal C=C bond. The atoms of imidazoline ring in this compound (I) are approximately coplanar, in which, the torsion angle of C3—N1—C5—N2 is 1.74 (17)°, the torsion angle of C4—N2—C5—N1 is 11.16 (14)°, and the torsion angle of C5—N1—C3—C4 is -12.82 (13)°.
The molecules are linked by intermolecular N—H···O hydrogen bonds and O—H···N bonds (Table 1). There is also an intramolecular hydrogen bond involving the O2 and amide N2 atoms.
For related literature, see: Wang & Huang (1996).
Data collection: (CrystalClear; Rigaku, 2005); cell
(CrystalClear; Rigaku, 2005); data reduction: (CrystalClear; Rigaku, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Bruker, 1997); software used to prepare material for publication: SHELXTL (Bruker, 1997).C14H15N3O2 | F(000) = 544 |
Mr = 257.29 | Dx = 1.355 Mg m−3 |
Monoclinic, P21/c | Melting point = 449–450 K |
Hall symbol: -P 2ybc | Mo Kα radiation, λ = 0.71073 Å |
a = 8.3748 (17) Å | Cell parameters from 4329 reflections |
b = 14.633 (3) Å | θ = 2.3–22.5° |
c = 10.784 (2) Å | µ = 0.09 mm−1 |
β = 107.33 (3)° | T = 113 K |
V = 1261.6 (4) Å3 | Prism, colourless |
Z = 4 | 0.10 × 0.08 × 0.06 mm |
Rigaku Saturn diffractometer | 2994 independent reflections |
Radiation source: rotating anode | 2534 reflections with I > 2σ(I) |
Confocal monochromator | Rint = 0.036 |
Detector resolution: 7.31 pixels mm-1 | θmax = 27.9°, θmin = 2.4° |
ω and φ scans | h = −11→11 |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) | k = −19→18 |
Tmin = 0.982, Tmax = 0.994 | l = −14→11 |
9551 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.041 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.103 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.10 | w = 1/[σ2(Fo2) + (0.0503P)2 + 0.2093P] where P = (Fo2 + 2Fc2)/3 |
2994 reflections | (Δ/σ)max < 0.001 |
180 parameters | Δρmax = 0.32 e Å−3 |
0 restraints | Δρmin = −0.18 e Å−3 |
C14H15N3O2 | V = 1261.6 (4) Å3 |
Mr = 257.29 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 8.3748 (17) Å | µ = 0.09 mm−1 |
b = 14.633 (3) Å | T = 113 K |
c = 10.784 (2) Å | 0.10 × 0.08 × 0.06 mm |
β = 107.33 (3)° |
Rigaku Saturn diffractometer | 2994 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) | 2534 reflections with I > 2σ(I) |
Tmin = 0.982, Tmax = 0.994 | Rint = 0.036 |
9551 measured reflections |
R[F2 > 2σ(F2)] = 0.041 | 0 restraints |
wR(F2) = 0.103 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.10 | Δρmax = 0.32 e Å−3 |
2994 reflections | Δρmin = −0.18 e Å−3 |
180 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.30219 (13) | 0.59907 (7) | 0.03041 (9) | 0.0280 (2) | |
H1 | 0.323 (2) | 0.6459 (13) | −0.0116 (18) | 0.044 (5)* | |
O2 | 0.91862 (10) | 0.56888 (6) | 0.57744 (8) | 0.0186 (2) | |
N1 | 0.47423 (12) | 0.51059 (7) | 0.28326 (10) | 0.0171 (2) | |
N2 | 0.72478 (13) | 0.46439 (7) | 0.39657 (10) | 0.0170 (2) | |
N3 | 0.41182 (14) | 0.73000 (8) | 0.45144 (11) | 0.0259 (3) | |
C1 | 0.30005 (16) | 0.63405 (9) | 0.15308 (12) | 0.0195 (3) | |
H1A | 0.1954 | 0.6687 | 0.1432 | 0.023* | |
H1B | 0.3957 | 0.6760 | 0.1876 | 0.023* | |
C2 | 0.31137 (15) | 0.55527 (9) | 0.24601 (11) | 0.0169 (3) | |
H2A | 0.2878 | 0.5781 | 0.3252 | 0.020* | |
H2B | 0.2244 | 0.5097 | 0.2049 | 0.020* | |
C3 | 0.49585 (16) | 0.42196 (9) | 0.22523 (12) | 0.0201 (3) | |
H3A | 0.4665 | 0.4264 | 0.1295 | 0.024* | |
H3B | 0.4264 | 0.3740 | 0.2483 | 0.024* | |
C4 | 0.68186 (16) | 0.40238 (9) | 0.28553 (12) | 0.0210 (3) | |
H4A | 0.7016 | 0.3378 | 0.3135 | 0.025* | |
H4B | 0.7461 | 0.4167 | 0.2244 | 0.025* | |
C5 | 0.61006 (14) | 0.53014 (8) | 0.38307 (11) | 0.0150 (2) | |
C6 | 0.63996 (14) | 0.60969 (8) | 0.46455 (11) | 0.0154 (2) | |
C7 | 0.51223 (15) | 0.67519 (9) | 0.45570 (11) | 0.0178 (3) | |
C8 | 0.80273 (14) | 0.62602 (8) | 0.55445 (11) | 0.0151 (2) | |
C10 | 0.79435 (15) | 0.79899 (9) | 0.56137 (12) | 0.0194 (3) | |
H10 | 0.7338 | 0.7999 | 0.4716 | 0.023* | |
C11 | 0.83750 (16) | 0.88063 (9) | 0.62852 (13) | 0.0236 (3) | |
H11 | 0.8066 | 0.9372 | 0.5848 | 0.028* | |
C12 | 0.92588 (16) | 0.87938 (10) | 0.75974 (13) | 0.0238 (3) | |
H12 | 0.9541 | 0.9352 | 0.8062 | 0.029* | |
C13 | 0.97302 (16) | 0.79694 (10) | 0.82305 (12) | 0.0225 (3) | |
H13 | 1.0342 | 0.7964 | 0.9127 | 0.027* | |
C9 | 0.83921 (14) | 0.71581 (8) | 0.62480 (11) | 0.0154 (2) | |
C14 | 0.93138 (15) | 0.71500 (9) | 0.75621 (12) | 0.0194 (3) | |
H14 | 0.9654 | 0.6586 | 0.7997 | 0.023* | |
H2 | 0.827 (2) | 0.4743 (11) | 0.4482 (16) | 0.031 (4)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0475 (6) | 0.0210 (5) | 0.0173 (5) | −0.0073 (4) | 0.0125 (4) | −0.0009 (4) |
O2 | 0.0197 (4) | 0.0155 (5) | 0.0179 (4) | 0.0038 (3) | 0.0016 (3) | 0.0001 (3) |
N1 | 0.0172 (5) | 0.0146 (5) | 0.0186 (5) | −0.0013 (4) | 0.0041 (4) | −0.0033 (4) |
N2 | 0.0173 (5) | 0.0137 (5) | 0.0188 (5) | 0.0001 (4) | 0.0033 (4) | −0.0040 (4) |
N3 | 0.0213 (6) | 0.0246 (6) | 0.0289 (6) | 0.0036 (5) | 0.0030 (4) | −0.0091 (5) |
C1 | 0.0230 (6) | 0.0166 (6) | 0.0188 (6) | −0.0009 (5) | 0.0063 (5) | −0.0014 (5) |
C2 | 0.0148 (6) | 0.0179 (6) | 0.0175 (6) | −0.0019 (5) | 0.0038 (4) | −0.0002 (5) |
C3 | 0.0223 (6) | 0.0159 (6) | 0.0215 (6) | −0.0022 (5) | 0.0057 (5) | −0.0054 (5) |
C4 | 0.0232 (6) | 0.0161 (6) | 0.0223 (6) | 0.0000 (5) | 0.0049 (5) | −0.0064 (5) |
C5 | 0.0166 (6) | 0.0148 (6) | 0.0142 (5) | −0.0014 (4) | 0.0053 (4) | 0.0016 (4) |
C6 | 0.0172 (6) | 0.0129 (6) | 0.0160 (6) | 0.0005 (4) | 0.0050 (4) | −0.0008 (4) |
C7 | 0.0179 (6) | 0.0182 (6) | 0.0160 (6) | −0.0020 (5) | 0.0031 (4) | −0.0047 (5) |
C8 | 0.0191 (6) | 0.0139 (6) | 0.0129 (5) | 0.0001 (4) | 0.0055 (4) | 0.0016 (4) |
C10 | 0.0188 (6) | 0.0172 (6) | 0.0207 (6) | 0.0008 (5) | 0.0034 (5) | −0.0015 (5) |
C11 | 0.0222 (6) | 0.0159 (7) | 0.0331 (7) | 0.0005 (5) | 0.0087 (5) | −0.0024 (5) |
C12 | 0.0190 (6) | 0.0216 (7) | 0.0326 (7) | −0.0043 (5) | 0.0102 (5) | −0.0144 (5) |
C13 | 0.0188 (6) | 0.0300 (8) | 0.0185 (6) | −0.0027 (5) | 0.0055 (5) | −0.0079 (5) |
C9 | 0.0144 (6) | 0.0155 (6) | 0.0166 (6) | −0.0007 (4) | 0.0052 (4) | −0.0029 (4) |
C14 | 0.0181 (6) | 0.0219 (7) | 0.0181 (6) | 0.0003 (5) | 0.0054 (5) | −0.0014 (5) |
O1—C1 | 1.4235 (15) | C4—H4A | 0.9900 |
O1—H1 | 0.87 (2) | C4—H4B | 0.9900 |
O2—C8 | 1.2487 (14) | C5—C6 | 1.4348 (17) |
N1—C5 | 1.3435 (16) | C6—C7 | 1.4182 (17) |
N1—C2 | 1.4569 (16) | C6—C8 | 1.4381 (17) |
N1—C3 | 1.4744 (16) | C8—C9 | 1.5022 (16) |
N2—C5 | 1.3366 (16) | C10—C11 | 1.3879 (18) |
N2—C4 | 1.4595 (16) | C10—C9 | 1.3920 (17) |
N2—H2 | 0.881 (16) | C10—H10 | 0.9500 |
N3—C7 | 1.1530 (16) | C11—C12 | 1.388 (2) |
C1—C2 | 1.5119 (17) | C11—H11 | 0.9500 |
C1—H1A | 0.9900 | C12—C13 | 1.384 (2) |
C1—H1B | 0.9900 | C12—H12 | 0.9500 |
C2—H2A | 0.9900 | C13—C14 | 1.3889 (18) |
C2—H2B | 0.9900 | C13—H13 | 0.9500 |
C3—C4 | 1.5258 (18) | C9—C14 | 1.3974 (17) |
C3—H3A | 0.9900 | C14—H14 | 0.9500 |
C3—H3B | 0.9900 | ||
C1—O1—H1 | 105.2 (12) | H4A—C4—H4B | 109.3 |
C5—N1—C2 | 128.69 (10) | N2—C5—N1 | 110.10 (11) |
C5—N1—C3 | 110.22 (10) | N2—C5—C6 | 121.91 (11) |
C2—N1—C3 | 120.06 (10) | N1—C5—C6 | 127.95 (11) |
C5—N2—C4 | 111.39 (10) | C7—C6—C5 | 121.11 (11) |
C5—N2—H2 | 118.7 (11) | C7—C6—C8 | 118.52 (11) |
C4—N2—H2 | 125.1 (11) | C5—C6—C8 | 120.35 (11) |
O1—C1—C2 | 109.04 (10) | N3—C7—C6 | 177.90 (13) |
O1—C1—H1A | 109.9 | O2—C8—C6 | 123.17 (11) |
C2—C1—H1A | 109.9 | O2—C8—C9 | 117.15 (10) |
O1—C1—H1B | 109.9 | C6—C8—C9 | 119.68 (10) |
C2—C1—H1B | 109.9 | C11—C10—C9 | 120.40 (12) |
H1A—C1—H1B | 108.3 | C11—C10—H10 | 119.8 |
N1—C2—C1 | 113.19 (10) | C9—C10—H10 | 119.8 |
N1—C2—H2A | 108.9 | C10—C11—C12 | 119.83 (13) |
C1—C2—H2A | 108.9 | C10—C11—H11 | 120.1 |
N1—C2—H2B | 108.9 | C12—C11—H11 | 120.1 |
C1—C2—H2B | 108.9 | C13—C12—C11 | 120.10 (12) |
H2A—C2—H2B | 107.8 | C13—C12—H12 | 120.0 |
N1—C3—C4 | 102.90 (10) | C11—C12—H12 | 120.0 |
N1—C3—H3A | 111.2 | C12—C13—C14 | 120.37 (12) |
C4—C3—H3A | 111.2 | C12—C13—H13 | 119.8 |
N1—C3—H3B | 111.2 | C14—C13—H13 | 119.8 |
C4—C3—H3B | 111.2 | C10—C9—C14 | 119.50 (11) |
H3A—C3—H3B | 109.1 | C10—C9—C8 | 122.15 (11) |
N2—C4—C3 | 101.74 (10) | C14—C9—C8 | 118.20 (11) |
N2—C4—H4A | 111.4 | C13—C14—C9 | 119.77 (12) |
C3—C4—H4A | 111.4 | C13—C14—H14 | 120.1 |
N2—C4—H4B | 111.4 | C9—C14—H14 | 120.1 |
C3—C4—H4B | 111.4 | ||
C5—N1—C2—C1 | 89.49 (14) | C7—C6—C8—O2 | 173.51 (11) |
C3—N1—C2—C1 | −103.33 (13) | C5—C6—C8—O2 | −8.42 (18) |
O1—C1—C2—N1 | 69.56 (13) | C7—C6—C8—C9 | −6.98 (16) |
C5—N1—C3—C4 | −12.82 (13) | C5—C6—C8—C9 | 171.09 (10) |
C2—N1—C3—C4 | 177.82 (10) | C9—C10—C11—C12 | −0.02 (19) |
C5—N2—C4—C3 | −18.34 (13) | C10—C11—C12—C13 | 0.94 (19) |
N1—C3—C4—N2 | 17.71 (12) | C11—C12—C13—C14 | −0.45 (19) |
C4—N2—C5—N1 | 11.16 (14) | C11—C10—C9—C14 | −1.39 (18) |
C4—N2—C5—C6 | −166.78 (11) | C11—C10—C9—C8 | −176.84 (11) |
C2—N1—C5—N2 | 169.93 (11) | O2—C8—C9—C10 | 133.69 (12) |
C3—N1—C5—N2 | 1.74 (14) | C6—C8—C9—C10 | −45.85 (16) |
C2—N1—C5—C6 | −12.3 (2) | O2—C8—C9—C14 | −41.82 (15) |
C3—N1—C5—C6 | 179.52 (11) | C6—C8—C9—C14 | 138.64 (12) |
N2—C5—C6—C7 | −174.96 (11) | C12—C13—C14—C9 | −0.96 (18) |
N1—C5—C6—C7 | 7.49 (19) | C10—C9—C14—C13 | 1.87 (18) |
N2—C5—C6—C8 | 7.02 (17) | C8—C9—C14—C13 | 177.50 (10) |
N1—C5—C6—C8 | −170.52 (11) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O2i | 0.881 (16) | 2.318 (16) | 2.9557 (15) | 129.3 (13) |
N2—H2···O2 | 0.881 (16) | 1.953 (16) | 2.6252 (15) | 132.0 (14) |
O1—H1···N3ii | 0.87 (2) | 2.04 (2) | 2.8794 (16) | 160.9 (17) |
Symmetry codes: (i) −x+2, −y+1, −z+1; (ii) x, −y+3/2, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | C14H15N3O2 |
Mr | 257.29 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 113 |
a, b, c (Å) | 8.3748 (17), 14.633 (3), 10.784 (2) |
β (°) | 107.33 (3) |
V (Å3) | 1261.6 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.10 × 0.08 × 0.06 |
Data collection | |
Diffractometer | Rigaku Saturn |
Absorption correction | Multi-scan (CrystalClear; Rigaku, 2005) |
Tmin, Tmax | 0.982, 0.994 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9551, 2994, 2534 |
Rint | 0.036 |
(sin θ/λ)max (Å−1) | 0.658 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.041, 0.103, 1.10 |
No. of reflections | 2994 |
No. of parameters | 180 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.32, −0.18 |
Computer programs: (CrystalClear; Rigaku, 2005), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXTL (Bruker, 1997).
C5—N1—C3—C4 | −12.82 (13) | C4—N2—C5—N1 | 11.16 (14) |
C5—N2—C4—C3 | −18.34 (13) | C3—N1—C5—N2 | 1.74 (14) |
N1—C3—C4—N2 | 17.71 (12) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O2i | 0.881 (16) | 2.318 (16) | 2.9557 (15) | 129.3 (13) |
N2—H2···O2 | 0.881 (16) | 1.953 (16) | 2.6252 (15) | 132.0 (14) |
O1—H1···N3ii | 0.87 (2) | 2.04 (2) | 2.8794 (16) | 160.9 (17) |
Symmetry codes: (i) −x+2, −y+1, −z+1; (ii) x, −y+3/2, z−1/2. |
Acknowledgements
We thank Haibin Song at Nankai University for the X-ray crystallographic determination.
References
Bruker (1997). SHELXTL. Version 5.10. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Rigaku (2005). CrystalClear. Version 1.36. Rigaku Corporation, Tokyo, Japan. Google Scholar
Sheldrick, G. M. (1997). SHELXS97 and SHELXL97. University of Göttingen, Germany. Google Scholar
Wang, L.-B. & Huang, Z.-T. (1996). Synth. Commun. 26, 459–473. CrossRef CAS Web of Science Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Heterocyclic ketene aminals (HKAs) are versatile synthons for heterocyclic synthesis. The title compound, (I), (Fig. 1), which possesses a β-hydroxyethyl group on the nitrogen atom of the imidazolidine ring, is a member of this family (Wang & Huang, 1996).
Due to the extended conjugation in the molecule, some abnormal geometrical parameters occur. For example, O2—C8 = 1.2487 (14) Å, which is longer than a normal double bond; the length of N1—C5 [1.3435 (16) Å] and N2—C5 [1.3366 (16) Å] are shorter than those of normal C—N single bonds; the length of C5—C6 [1.4348 (17) Å] double bond is longer than that of a normal C=C bond. The atoms of imidazoline ring in this compound (I) are approximately coplanar, in which, the torsion angle of C3—N1—C5—N2 is 1.74 (17)°, the torsion angle of C4—N2—C5—N1 is 11.16 (14)°, and the torsion angle of C5—N1—C3—C4 is -12.82 (13)°.
The molecules are linked by intermolecular N—H···O hydrogen bonds and O—H···N bonds (Table 1). There is also an intramolecular hydrogen bond involving the O2 and amide N2 atoms.