organic compounds
4,6-Bis[4-(benzylsulfanyl)styryl]-2-(methylsulfanyl)pyrimidine
aDepartment of Chemistry, Chaohu College, Chaohu 238000, People's Republic of China
*Correspondence e-mail: chlehua@sohu.com
The title compound, C35H30N2S3, has been synthesized by a solvent-free reaction. The molecule exhibits an E,E configuration, the benzene rings and pyrimidine rings being located on the opposite sides of the C=C bonds. The centroid–centroid separation of 3.5808 (17) Å indicates the existence of π–π stacking between nearly parallel pyrimidine and benzene rings of adjacent molecules.
Related literature
For details of the applications of conjugated organic molecules, see: Frederiksen et al. (2001); Zhao et al. (1995). For heterocycle-based two-photon absorbing chromophores exhibiting large TPA cross-sections, see: Huang et al. (2003).
Experimental
Crystal data
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Data collection: SMART (Bruker, 1997); cell SAINT (Bruker, 1997); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: SHELXL97.
Supporting information
https://doi.org/10.1107/S1600536807065063/xu2372sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536807065063/xu2372Isup2.hkl
At room temperature, t-BuOK (5.6 g, 50 mmol) was placed into a dry mortar and milled to very small, then 2-thiomethyl-4,6-dimethylpyrimidine (1.54 g, 10 mmol) and 4-benzylthiobenzalaldehyde (4.56 g, 20 mmol) were added and mixed. The mixture was milled vigorously for about 20 min. The mixture became sticky and then continuously milled for 10 min. After completion of the reaction (monitored by TLC), the mixture was dispersed in 100 ml me thanol. The residual solid was filtered and recrystallized from anhydrous dichloromethane/methanol solution, to give microcrystals (2.87 g, yield 50%). Single crystals suitable for X-ray analysis were obtained by slow evaporation from a dichloromethane/2-propanol (3:1) solution.
The H atoms were positioned geometrically and allowed to ride on their parent atoms, with C—H = 0.93 or 0.96 Å and Uiso(H) = 1.2 or 1.5Ueq(C).
Two-photon absorption (TPA) processes in conjugated organic molecules have aroused considerable attention due to their potential applications in optical data storage, three-dimension fluorescence imaging, photodynamic therapy, two-photon upconversion lasing and three-dimension lithographic microfabrication (Frederiksen et al., 2001; Zhao et al., 1995). A sustained level of fundamental research over the past ten years has left organic nonlinear optical (NLO) well positioned to make a technological impact in a variety of disciplines. Some studies showed that the heterocycle-based two-photon absorbing chromophores exhibit large TPA cross-sections (Huang et al., 2003). As part of our ongoing investigtion on heterocycle-based two-photon absorbing chromophores, the title compound has been prepared and its
is presented here.The molecule structure is shown in Fig. 1. Bond lengths and angles are normal. The C7-containing and C22-containing benzene rings are nearly coplanar with the pyrimidine ring, dihedral angles being 8.59 (2)° and 8.40 (2)°, respectively. In the π-π stacking is observed between nearly parallel pyrimidine and C10i-containing benzene rings as shown in Fig. 2 [symmetry code: (i) 1 + x,y,z]; the dihedral angle and centroid-to-centroid separation being 8.69 (13)° and 3.5808 (17) Å, respectively.
For details of the applications of conjugated organic molecules, see: Frederiksen et al. (2001); Zhao et al. (1995). For heterocycle-based two-photon absorbing chromophores exhibiting large TPA cross-sections, see: Huang et al. (2003).
Data collection: SMART (Bruker, 1997); cell
SAINT (Bruker, 1997); data reduction: SAINT (Bruker, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: SHELXL97 (Sheldrick, 1997).Fig. 1. The molecular structure of the title compound with 30% probability displacement ellipsoids for non-H atoms. | |
Fig. 2. A diagram showing π-π stacking [symmetry code: (i) 1 + x,y,z]. |
C35H30N2S3 | Z = 2 |
Mr = 574.79 | F(000) = 604 |
Triclinic, P1 | Dx = 1.278 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.199 (1) Å | Cell parameters from 2350 reflections |
b = 10.1694 (15) Å | θ = 2.5–25.8° |
c = 21.161 (2) Å | µ = 0.28 mm−1 |
α = 77.412 (1)° | T = 298 K |
β = 88.425 (3)° | Block, red |
γ = 81.129 (2)° | 0.50 × 0.38 × 0.31 mm |
V = 1493.8 (3) Å3 |
Bruker SMART CCD area detector diffractometer | 5185 independent reflections |
Radiation source: fine-focus sealed tube | 3229 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.026 |
φ and ω scans | θmax = 25.0°, θmin = 2.0° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −8→8 |
Tmin = 0.875, Tmax = 0.920 | k = −12→9 |
7820 measured reflections | l = −25→25 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.046 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.129 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0555P)2 + 0.0894P] where P = (Fo2 + 2Fc2)/3 |
5185 reflections | (Δ/σ)max < 0.001 |
361 parameters | Δρmax = 0.22 e Å−3 |
0 restraints | Δρmin = −0.21 e Å−3 |
C35H30N2S3 | γ = 81.129 (2)° |
Mr = 574.79 | V = 1493.8 (3) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.199 (1) Å | Mo Kα radiation |
b = 10.1694 (15) Å | µ = 0.28 mm−1 |
c = 21.161 (2) Å | T = 298 K |
α = 77.412 (1)° | 0.50 × 0.38 × 0.31 mm |
β = 88.425 (3)° |
Bruker SMART CCD area detector diffractometer | 5185 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 3229 reflections with I > 2σ(I) |
Tmin = 0.875, Tmax = 0.920 | Rint = 0.026 |
7820 measured reflections |
R[F2 > 2σ(F2)] = 0.046 | 0 restraints |
wR(F2) = 0.129 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.22 e Å−3 |
5185 reflections | Δρmin = −0.21 e Å−3 |
361 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.57325 (12) | 0.40771 (8) | 0.15862 (4) | 0.0709 (3) | |
S2 | −0.76178 (11) | 1.09386 (8) | 0.14193 (4) | 0.0630 (3) | |
S3 | 1.42863 (10) | 0.70995 (8) | 0.54464 (4) | 0.0593 (2) | |
N1 | 0.6566 (3) | 0.5069 (2) | 0.25966 (10) | 0.0453 (5) | |
N2 | 0.3517 (3) | 0.5797 (2) | 0.21019 (10) | 0.0477 (6) | |
C1 | 0.5236 (4) | 0.5089 (3) | 0.21646 (12) | 0.0461 (7) | |
C2 | 0.3081 (4) | 0.6646 (3) | 0.25115 (12) | 0.0437 (6) | |
C3 | 0.4379 (4) | 0.6735 (3) | 0.29656 (12) | 0.0472 (7) | |
H3 | 0.4085 | 0.7335 | 0.3241 | 0.057* | |
C4 | 0.6107 (4) | 0.5926 (3) | 0.30053 (12) | 0.0435 (6) | |
C5 | 0.1233 (4) | 0.7484 (3) | 0.24433 (13) | 0.0525 (7) | |
H5 | 0.0955 | 0.8108 | 0.2708 | 0.063* | |
C6 | −0.0066 (4) | 0.7414 (3) | 0.20317 (13) | 0.0487 (7) | |
H6 | 0.0239 | 0.6759 | 0.1785 | 0.058* | |
C7 | −0.1931 (4) | 0.8236 (3) | 0.19117 (12) | 0.0449 (7) | |
C8 | −0.2598 (4) | 0.9304 (3) | 0.22157 (13) | 0.0553 (8) | |
H8 | −0.1856 | 0.9487 | 0.2529 | 0.066* | |
C9 | −0.4317 (4) | 1.0091 (3) | 0.20649 (13) | 0.0535 (8) | |
H9 | −0.4712 | 1.0804 | 0.2272 | 0.064* | |
C10 | −0.5476 (4) | 0.9832 (3) | 0.16040 (13) | 0.0468 (7) | |
C11 | −0.4868 (4) | 0.8747 (3) | 0.13147 (13) | 0.0496 (7) | |
H11 | −0.5639 | 0.8539 | 0.1016 | 0.060* | |
C12 | −0.3126 (4) | 0.7972 (3) | 0.14656 (12) | 0.0487 (7) | |
H12 | −0.2740 | 0.7252 | 0.1263 | 0.058* | |
C13 | −0.8416 (4) | 1.0492 (3) | 0.06998 (14) | 0.0627 (9) | |
H13A | −0.7393 | 1.0448 | 0.0393 | 0.075* | |
H13B | −0.8820 | 0.9604 | 0.0813 | 0.075* | |
C14 | −1.0021 (4) | 1.1548 (3) | 0.03979 (13) | 0.0518 (7) | |
C15 | −1.1850 (4) | 1.1341 (3) | 0.05280 (14) | 0.0610 (8) | |
H15 | −1.2083 | 1.0543 | 0.0808 | 0.073* | |
C16 | −1.3336 (5) | 1.2288 (4) | 0.02532 (19) | 0.0816 (11) | |
H16 | −1.4562 | 1.2134 | 0.0352 | 0.098* | |
C17 | −1.3021 (7) | 1.3434 (5) | −0.01566 (19) | 0.0933 (14) | |
H17 | −1.4033 | 1.4061 | −0.0351 | 0.112* | |
C18 | −1.1220 (8) | 1.3695 (4) | −0.02939 (19) | 0.1124 (15) | |
H18 | −1.1011 | 1.4499 | −0.0574 | 0.135* | |
C19 | −0.9702 (5) | 1.2737 (4) | −0.00067 (17) | 0.0872 (11) | |
H19 | −0.8477 | 1.2910 | −0.0091 | 0.105* | |
C20 | 0.7619 (4) | 0.5923 (3) | 0.34563 (12) | 0.0481 (7) | |
H20 | 0.8696 | 0.5292 | 0.3446 | 0.058* | |
C21 | 0.7625 (4) | 0.6709 (3) | 0.38730 (12) | 0.0486 (7) | |
H21 | 0.6516 | 0.7290 | 0.3911 | 0.058* | |
C22 | 0.9207 (4) | 0.6763 (3) | 0.42844 (12) | 0.0442 (6) | |
C23 | 0.8985 (4) | 0.7586 (3) | 0.47332 (13) | 0.0556 (8) | |
H23 | 0.7807 | 0.8077 | 0.4779 | 0.067* | |
C24 | 1.0456 (4) | 0.7700 (3) | 0.51137 (13) | 0.0553 (8) | |
H24 | 1.0254 | 0.8246 | 0.5416 | 0.066* | |
C25 | 1.2236 (4) | 0.6999 (3) | 0.50432 (12) | 0.0437 (6) | |
C26 | 1.2470 (4) | 0.6161 (3) | 0.45996 (12) | 0.0502 (7) | |
H26 | 1.3648 | 0.5673 | 0.4549 | 0.060* | |
C27 | 1.0977 (4) | 0.6045 (3) | 0.42341 (13) | 0.0505 (7) | |
H27 | 1.1165 | 0.5468 | 0.3945 | 0.061* | |
C28 | 1.3614 (4) | 0.8283 (3) | 0.59547 (16) | 0.0743 (10) | |
H28A | 1.2957 | 0.9133 | 0.5703 | 0.089* | |
H28B | 1.2786 | 0.7914 | 0.6295 | 0.089* | |
C29 | 1.5394 (4) | 0.8521 (3) | 0.62436 (14) | 0.0545 (8) | |
C30 | 1.6381 (5) | 0.7501 (4) | 0.66976 (15) | 0.0777 (10) | |
H30 | 1.5944 | 0.6669 | 0.6825 | 0.093* | |
C31 | 1.8009 (6) | 0.7694 (4) | 0.69664 (17) | 0.0919 (12) | |
H31 | 1.8660 | 0.6999 | 0.7278 | 0.110* | |
C32 | 1.8670 (5) | 0.8905 (4) | 0.67762 (17) | 0.0742 (10) | |
H32 | 1.9762 | 0.9038 | 0.6962 | 0.089* | |
C33 | 1.7747 (5) | 0.9907 (3) | 0.63203 (16) | 0.0704 (9) | |
H33 | 1.8214 | 1.0726 | 0.6186 | 0.085* | |
C34 | 1.6106 (5) | 0.9720 (3) | 0.60510 (15) | 0.0682 (9) | |
H34 | 1.5477 | 1.0417 | 0.5735 | 0.082* | |
C35 | 0.8140 (5) | 0.3378 (4) | 0.17513 (18) | 0.0965 (13) | |
H35A | 0.8879 | 0.4104 | 0.1698 | 0.145* | |
H35B | 0.8570 | 0.2800 | 0.1457 | 0.145* | |
H35C | 0.8268 | 0.2855 | 0.2188 | 0.145* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0735 (6) | 0.0698 (6) | 0.0726 (6) | 0.0162 (4) | −0.0277 (5) | −0.0374 (4) |
S2 | 0.0491 (5) | 0.0758 (6) | 0.0681 (5) | 0.0111 (4) | −0.0168 (4) | −0.0363 (4) |
S3 | 0.0447 (4) | 0.0671 (5) | 0.0722 (5) | −0.0031 (4) | −0.0138 (4) | −0.0303 (4) |
N1 | 0.0461 (14) | 0.0443 (13) | 0.0459 (13) | −0.0042 (11) | −0.0087 (11) | −0.0113 (10) |
N2 | 0.0471 (14) | 0.0467 (13) | 0.0490 (13) | −0.0035 (11) | −0.0109 (11) | −0.0110 (11) |
C1 | 0.0542 (18) | 0.0397 (15) | 0.0435 (15) | −0.0052 (13) | −0.0100 (14) | −0.0072 (12) |
C2 | 0.0426 (16) | 0.0443 (16) | 0.0426 (15) | −0.0047 (13) | −0.0023 (13) | −0.0070 (13) |
C3 | 0.0478 (17) | 0.0544 (17) | 0.0422 (15) | −0.0073 (14) | −0.0027 (13) | −0.0166 (13) |
C4 | 0.0466 (17) | 0.0442 (16) | 0.0394 (14) | −0.0096 (13) | −0.0053 (13) | −0.0057 (12) |
C5 | 0.0501 (18) | 0.0574 (18) | 0.0514 (17) | −0.0041 (14) | −0.0055 (14) | −0.0166 (14) |
C6 | 0.0493 (17) | 0.0429 (16) | 0.0535 (17) | −0.0063 (13) | −0.0037 (14) | −0.0098 (13) |
C7 | 0.0419 (16) | 0.0429 (16) | 0.0487 (16) | −0.0062 (13) | −0.0044 (13) | −0.0072 (13) |
C8 | 0.0550 (19) | 0.0578 (18) | 0.0567 (18) | −0.0080 (15) | −0.0181 (15) | −0.0182 (15) |
C9 | 0.0514 (18) | 0.0501 (17) | 0.0628 (19) | 0.0007 (14) | −0.0109 (15) | −0.0250 (14) |
C10 | 0.0417 (16) | 0.0492 (16) | 0.0503 (16) | −0.0036 (13) | −0.0047 (13) | −0.0141 (13) |
C11 | 0.0428 (17) | 0.0546 (17) | 0.0551 (17) | −0.0064 (14) | −0.0102 (13) | −0.0189 (14) |
C12 | 0.0518 (18) | 0.0462 (16) | 0.0519 (17) | −0.0067 (14) | −0.0030 (14) | −0.0192 (13) |
C13 | 0.0527 (19) | 0.074 (2) | 0.066 (2) | 0.0063 (16) | −0.0156 (15) | −0.0344 (17) |
C14 | 0.0540 (19) | 0.062 (2) | 0.0413 (16) | 0.0007 (15) | −0.0049 (14) | −0.0207 (15) |
C15 | 0.054 (2) | 0.069 (2) | 0.0616 (19) | −0.0117 (17) | −0.0106 (16) | −0.0160 (16) |
C16 | 0.056 (2) | 0.106 (3) | 0.084 (3) | 0.006 (2) | −0.019 (2) | −0.034 (2) |
C17 | 0.110 (4) | 0.091 (3) | 0.066 (3) | 0.033 (3) | −0.032 (3) | −0.020 (2) |
C18 | 0.153 (5) | 0.090 (3) | 0.074 (3) | −0.005 (3) | 0.002 (3) | 0.015 (2) |
C19 | 0.083 (3) | 0.102 (3) | 0.070 (2) | −0.015 (2) | 0.012 (2) | −0.006 (2) |
C20 | 0.0444 (17) | 0.0530 (17) | 0.0465 (16) | −0.0057 (13) | −0.0058 (13) | −0.0099 (13) |
C21 | 0.0403 (16) | 0.0590 (18) | 0.0472 (16) | −0.0062 (14) | −0.0029 (13) | −0.0138 (14) |
C22 | 0.0383 (15) | 0.0511 (16) | 0.0454 (16) | −0.0102 (13) | −0.0017 (12) | −0.0122 (13) |
C23 | 0.0405 (17) | 0.071 (2) | 0.0616 (18) | −0.0047 (15) | −0.0001 (14) | −0.0299 (16) |
C24 | 0.0461 (18) | 0.071 (2) | 0.0581 (18) | −0.0081 (15) | 0.0002 (14) | −0.0339 (15) |
C25 | 0.0427 (16) | 0.0449 (16) | 0.0439 (15) | −0.0073 (13) | −0.0057 (12) | −0.0094 (13) |
C26 | 0.0423 (16) | 0.0544 (17) | 0.0535 (17) | 0.0021 (14) | −0.0070 (13) | −0.0167 (14) |
C27 | 0.0536 (18) | 0.0534 (18) | 0.0495 (16) | −0.0038 (14) | −0.0067 (14) | −0.0238 (14) |
C28 | 0.055 (2) | 0.094 (3) | 0.088 (2) | −0.0027 (18) | −0.0088 (18) | −0.053 (2) |
C29 | 0.0501 (18) | 0.068 (2) | 0.0533 (18) | −0.0103 (16) | −0.0037 (14) | −0.0294 (16) |
C30 | 0.100 (3) | 0.076 (2) | 0.063 (2) | −0.042 (2) | −0.020 (2) | −0.0031 (18) |
C31 | 0.110 (3) | 0.091 (3) | 0.074 (2) | −0.029 (3) | −0.044 (2) | −0.001 (2) |
C32 | 0.066 (2) | 0.094 (3) | 0.075 (2) | −0.024 (2) | −0.0118 (19) | −0.036 (2) |
C33 | 0.085 (3) | 0.065 (2) | 0.074 (2) | −0.034 (2) | 0.005 (2) | −0.0270 (19) |
C34 | 0.085 (3) | 0.0491 (19) | 0.073 (2) | −0.0029 (18) | −0.0146 (19) | −0.0211 (16) |
C35 | 0.080 (3) | 0.110 (3) | 0.106 (3) | 0.032 (2) | −0.030 (2) | −0.066 (2) |
S1—C1 | 1.760 (3) | C16—H16 | 0.9300 |
S1—C35 | 1.782 (3) | C17—C18 | 1.374 (6) |
S2—C10 | 1.761 (3) | C17—H17 | 0.9300 |
S2—C13 | 1.812 (3) | C18—C19 | 1.401 (5) |
S3—C25 | 1.753 (3) | C18—H18 | 0.9300 |
S3—C28 | 1.788 (3) | C19—H19 | 0.9300 |
N1—C1 | 1.336 (3) | C20—C21 | 1.314 (3) |
N1—C4 | 1.357 (3) | C20—H20 | 0.9300 |
N2—C1 | 1.327 (3) | C21—C22 | 1.467 (3) |
N2—C2 | 1.350 (3) | C21—H21 | 0.9300 |
C2—C3 | 1.385 (3) | C22—C27 | 1.381 (3) |
C2—C5 | 1.457 (3) | C22—C23 | 1.387 (3) |
C3—C4 | 1.376 (3) | C23—C24 | 1.381 (3) |
C3—H3 | 0.9300 | C23—H23 | 0.9300 |
C4—C20 | 1.466 (3) | C24—C25 | 1.388 (3) |
C5—C6 | 1.316 (3) | C24—H24 | 0.9300 |
C5—H5 | 0.9300 | C25—C26 | 1.390 (3) |
C6—C7 | 1.465 (3) | C26—C27 | 1.375 (3) |
C6—H6 | 0.9300 | C26—H26 | 0.9300 |
C7—C12 | 1.389 (3) | C27—H27 | 0.9300 |
C7—C8 | 1.397 (3) | C28—C29 | 1.509 (4) |
C8—C9 | 1.370 (4) | C28—H28A | 0.9700 |
C8—H8 | 0.9300 | C28—H28B | 0.9700 |
C9—C10 | 1.394 (3) | C29—C30 | 1.371 (4) |
C9—H9 | 0.9300 | C29—C34 | 1.371 (4) |
C10—C11 | 1.383 (3) | C30—C31 | 1.376 (4) |
C11—C12 | 1.380 (3) | C30—H30 | 0.9300 |
C11—H11 | 0.9300 | C31—C32 | 1.363 (5) |
C12—H12 | 0.9300 | C31—H31 | 0.9300 |
C13—C14 | 1.502 (4) | C32—C33 | 1.345 (4) |
C13—H13A | 0.9700 | C32—H32 | 0.9300 |
C13—H13B | 0.9700 | C33—C34 | 1.382 (4) |
C14—C19 | 1.369 (4) | C33—H33 | 0.9300 |
C14—C15 | 1.376 (4) | C34—H34 | 0.9300 |
C15—C16 | 1.372 (4) | C35—H35A | 0.9600 |
C15—H15 | 0.9300 | C35—H35B | 0.9600 |
C16—C17 | 1.339 (5) | C35—H35C | 0.9600 |
C1—S1—C35 | 102.24 (14) | C17—C18—H18 | 120.3 |
C10—S2—C13 | 102.92 (12) | C19—C18—H18 | 120.3 |
C25—S3—C28 | 106.17 (13) | C14—C19—C18 | 120.0 (4) |
C1—N1—C4 | 115.2 (2) | C14—C19—H19 | 120.0 |
C1—N2—C2 | 115.8 (2) | C18—C19—H19 | 120.0 |
N2—C1—N1 | 128.4 (2) | C21—C20—C4 | 127.4 (3) |
N2—C1—S1 | 112.86 (18) | C21—C20—H20 | 116.3 |
N1—C1—S1 | 118.8 (2) | C4—C20—H20 | 116.3 |
N2—C2—C3 | 120.5 (2) | C20—C21—C22 | 126.5 (3) |
N2—C2—C5 | 117.6 (2) | C20—C21—H21 | 116.7 |
C3—C2—C5 | 121.8 (2) | C22—C21—H21 | 116.7 |
C4—C3—C2 | 119.3 (2) | C27—C22—C23 | 117.0 (2) |
C4—C3—H3 | 120.3 | C27—C22—C21 | 122.5 (2) |
C2—C3—H3 | 120.3 | C23—C22—C21 | 120.5 (2) |
N1—C4—C3 | 120.8 (2) | C24—C23—C22 | 122.2 (3) |
N1—C4—C20 | 114.0 (2) | C24—C23—H23 | 118.9 |
C3—C4—C20 | 125.2 (2) | C22—C23—H23 | 118.9 |
C6—C5—C2 | 124.2 (2) | C23—C24—C25 | 119.9 (2) |
C6—C5—H5 | 117.9 | C23—C24—H24 | 120.1 |
C2—C5—H5 | 117.9 | C25—C24—H24 | 120.1 |
C5—C6—C7 | 128.3 (3) | C24—C25—C26 | 118.4 (2) |
C5—C6—H6 | 115.8 | C24—C25—S3 | 126.20 (19) |
C7—C6—H6 | 115.8 | C26—C25—S3 | 115.4 (2) |
C12—C7—C8 | 116.8 (2) | C27—C26—C25 | 120.7 (2) |
C12—C7—C6 | 119.4 (2) | C27—C26—H26 | 119.7 |
C8—C7—C6 | 123.9 (2) | C25—C26—H26 | 119.7 |
C9—C8—C7 | 121.9 (2) | C26—C27—C22 | 121.8 (2) |
C9—C8—H8 | 119.1 | C26—C27—H27 | 119.1 |
C7—C8—H8 | 119.1 | C22—C27—H27 | 119.1 |
C8—C9—C10 | 120.5 (2) | C29—C28—S3 | 107.2 (2) |
C8—C9—H9 | 119.8 | C29—C28—H28A | 110.3 |
C10—C9—H9 | 119.8 | S3—C28—H28A | 110.3 |
C11—C10—C9 | 118.5 (2) | C29—C28—H28B | 110.3 |
C11—C10—S2 | 124.3 (2) | S3—C28—H28B | 110.3 |
C9—C10—S2 | 117.21 (19) | H28A—C28—H28B | 108.5 |
C12—C11—C10 | 120.5 (2) | C30—C29—C34 | 118.2 (3) |
C12—C11—H11 | 119.8 | C30—C29—C28 | 119.7 (3) |
C10—C11—H11 | 119.8 | C34—C29—C28 | 122.1 (3) |
C11—C12—C7 | 121.9 (2) | C29—C30—C31 | 120.8 (3) |
C11—C12—H12 | 119.0 | C29—C30—H30 | 119.6 |
C7—C12—H12 | 119.0 | C31—C30—H30 | 119.6 |
C14—C13—S2 | 109.33 (18) | C32—C31—C30 | 120.0 (3) |
C14—C13—H13A | 109.8 | C32—C31—H31 | 120.0 |
S2—C13—H13A | 109.8 | C30—C31—H31 | 120.0 |
C14—C13—H13B | 109.8 | C33—C32—C31 | 120.2 (3) |
S2—C13—H13B | 109.8 | C33—C32—H32 | 119.9 |
H13A—C13—H13B | 108.3 | C31—C32—H32 | 119.9 |
C19—C14—C15 | 118.6 (3) | C32—C33—C34 | 120.0 (3) |
C19—C14—C13 | 120.9 (3) | C32—C33—H33 | 120.0 |
C15—C14—C13 | 120.5 (3) | C34—C33—H33 | 120.0 |
C16—C15—C14 | 121.4 (3) | C29—C34—C33 | 120.8 (3) |
C16—C15—H15 | 119.3 | C29—C34—H34 | 119.6 |
C14—C15—H15 | 119.3 | C33—C34—H34 | 119.6 |
C17—C16—C15 | 120.0 (4) | S1—C35—H35A | 109.5 |
C17—C16—H16 | 120.0 | S1—C35—H35B | 109.5 |
C15—C16—H16 | 120.0 | H35A—C35—H35B | 109.5 |
C16—C17—C18 | 120.8 (4) | S1—C35—H35C | 109.5 |
C16—C17—H17 | 119.6 | H35A—C35—H35C | 109.5 |
C18—C17—H17 | 119.6 | H35B—C35—H35C | 109.5 |
C17—C18—C19 | 119.3 (4) | ||
C2—N2—C1—N1 | 2.8 (4) | C13—C14—C15—C16 | −179.5 (2) |
C2—N2—C1—S1 | −176.85 (19) | C14—C15—C16—C17 | 0.8 (5) |
C4—N1—C1—N2 | −2.8 (4) | C15—C16—C17—C18 | −1.8 (6) |
C4—N1—C1—S1 | 176.89 (19) | C16—C17—C18—C19 | 0.9 (6) |
C35—S1—C1—N2 | 175.6 (2) | C15—C14—C19—C18 | −1.9 (5) |
C35—S1—C1—N1 | −4.1 (3) | C13—C14—C19—C18 | 178.6 (3) |
C1—N2—C2—C3 | −0.5 (4) | C17—C18—C19—C14 | 1.0 (6) |
C1—N2—C2—C5 | 177.7 (2) | N1—C4—C20—C21 | 175.0 (3) |
N2—C2—C3—C4 | −1.4 (4) | C3—C4—C20—C21 | −3.0 (5) |
C5—C2—C3—C4 | −179.5 (2) | C4—C20—C21—C22 | −174.9 (2) |
C1—N1—C4—C3 | 0.4 (4) | C20—C21—C22—C27 | 5.9 (5) |
C1—N1—C4—C20 | −177.7 (2) | C20—C21—C22—C23 | −176.1 (3) |
C2—C3—C4—N1 | 1.4 (4) | C27—C22—C23—C24 | 0.4 (4) |
C2—C3—C4—C20 | 179.3 (2) | C21—C22—C23—C24 | −177.7 (3) |
N2—C2—C5—C6 | 3.6 (4) | C22—C23—C24—C25 | 1.4 (5) |
C3—C2—C5—C6 | −178.2 (3) | C23—C24—C25—C26 | −1.9 (4) |
C2—C5—C6—C7 | −177.8 (3) | C23—C24—C25—S3 | 175.9 (2) |
C5—C6—C7—C12 | −178.0 (3) | C28—S3—C25—C24 | −0.3 (3) |
C5—C6—C7—C8 | 2.8 (5) | C28—S3—C25—C26 | 177.6 (2) |
C12—C7—C8—C9 | −2.5 (4) | C24—C25—C26—C27 | 0.8 (4) |
C6—C7—C8—C9 | 176.7 (3) | S3—C25—C26—C27 | −177.3 (2) |
C7—C8—C9—C10 | 1.0 (5) | C25—C26—C27—C22 | 0.9 (4) |
C8—C9—C10—C11 | 1.3 (4) | C23—C22—C27—C26 | −1.5 (4) |
C8—C9—C10—S2 | −177.6 (2) | C21—C22—C27—C26 | 176.6 (3) |
C13—S2—C10—C11 | −10.8 (3) | C25—S3—C28—C29 | −173.1 (2) |
C13—S2—C10—C9 | 168.1 (2) | S3—C28—C29—C30 | −70.1 (3) |
C9—C10—C11—C12 | −2.1 (4) | S3—C28—C29—C34 | 107.6 (3) |
S2—C10—C11—C12 | 176.7 (2) | C34—C29—C30—C31 | 2.0 (5) |
C10—C11—C12—C7 | 0.5 (4) | C28—C29—C30—C31 | 179.8 (3) |
C8—C7—C12—C11 | 1.7 (4) | C29—C30—C31—C32 | −0.8 (6) |
C6—C7—C12—C11 | −177.5 (2) | C30—C31—C32—C33 | −0.8 (6) |
C10—S2—C13—C14 | −168.0 (2) | C31—C32—C33—C34 | 1.1 (5) |
S2—C13—C14—C19 | 83.3 (3) | C30—C29—C34—C33 | −1.7 (5) |
S2—C13—C14—C15 | −96.2 (3) | C28—C29—C34—C33 | −179.5 (3) |
C19—C14—C15—C16 | 1.1 (4) | C32—C33—C34—C29 | 0.2 (5) |
Experimental details
Crystal data | |
Chemical formula | C35H30N2S3 |
Mr | 574.79 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 298 |
a, b, c (Å) | 7.199 (1), 10.1694 (15), 21.161 (2) |
α, β, γ (°) | 77.412 (1), 88.425 (3), 81.129 (2) |
V (Å3) | 1493.8 (3) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.28 |
Crystal size (mm) | 0.50 × 0.38 × 0.31 |
Data collection | |
Diffractometer | Bruker SMART CCD area detector |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.875, 0.920 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7820, 5185, 3229 |
Rint | 0.026 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.046, 0.129, 1.04 |
No. of reflections | 5185 |
No. of parameters | 361 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.22, −0.21 |
Computer programs: SMART (Bruker, 1997), SAINT (Bruker, 1997), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), ORTEP-3 for Windows (Farrugia, 1997).
Acknowledgements
This work was supported by the Education Committee of Anhui Province, China (KJ2007B089). We thank Professor D.-Q. Wang of Liao Cheng University for assistance with the
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Two-photon absorption (TPA) processes in conjugated organic molecules have aroused considerable attention due to their potential applications in optical data storage, three-dimension fluorescence imaging, photodynamic therapy, two-photon upconversion lasing and three-dimension lithographic microfabrication (Frederiksen et al., 2001; Zhao et al., 1995). A sustained level of fundamental research over the past ten years has left organic nonlinear optical (NLO) well positioned to make a technological impact in a variety of disciplines. Some studies showed that the heterocycle-based two-photon absorbing chromophores exhibit large TPA cross-sections (Huang et al., 2003). As part of our ongoing investigtion on heterocycle-based two-photon absorbing chromophores, the title compound has been prepared and its crystal structure is presented here.
The molecule structure is shown in Fig. 1. Bond lengths and angles are normal. The C7-containing and C22-containing benzene rings are nearly coplanar with the pyrimidine ring, dihedral angles being 8.59 (2)° and 8.40 (2)°, respectively. In the crystal structure, π-π stacking is observed between nearly parallel pyrimidine and C10i-containing benzene rings as shown in Fig. 2 [symmetry code: (i) 1 + x,y,z]; the dihedral angle and centroid-to-centroid separation being 8.69 (13)° and 3.5808 (17) Å, respectively.