organic compounds
(E)-2-Methoxy-6-[(5-methylisoxazol-3-yl)iminomethyl]phenol
aDepartment of Materials Science and Chemical Engineering, Taishan University, 271021 Taian, Shandong, People's Republic of China, and bDepartment of Applied Science and Technology, Taishan University, 271021 Taian, Shandong, People's Republic of China
*Correspondence e-mail: imlijikun@163.com
In the title molecule, C12H12N2O3, the benzene and isoxazole rings form a dihedral angle of 5.9 (6)°. The hydroxy group is involved in an intramolecular O—H⋯N hydrogen bond [O⋯N = 2.616 (5) Å], resulting in approximate planarity of the molecular skeleton. In the molecules related by translation along the c axis are stacked into columns, the shortest intermolecular C⋯C distance being 3.298 (6) Å.
Related literature
For related crystal structures, see Li et al. (2007). For general background, see Garnovskii et al. (1993).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Siemens, 1996); cell SMART; data reduction: SAINT (Siemens, 1996); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536808001888/cv2374sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808001888/cv2374Isup2.hkl
The title compound was synthesized by the reaction of 2-hydroxy-3-methoxybenzaldehyde (0.152 g, 1 mmol) and 5-methylisoxazol-3-amine (0.098 g, 1 mmol) in ethanol solution and stirred under reflux conditions (353 K) for 6 h. When cooled to room temperature the solution was filtered and after a week orange crystals suitable for X-ray diffraction study were obtained. Yield, 0.186 g, 80%. m.p. 365–367 K.
Analysis found: C 61.98, H 5.25, N 12.04%; C12H12N2O3 requires: C 62.02, H 5.21, N 12.06%.
The H atoms were geometrically positioned (C—H 0.93–0.96 Å, O—H = 0.82 Å) and refined in a riding-model approximation with Uiso(H) = 1.2Ueq(C-aromatic) and Uiso(H) = 1.5Ueq(C-methyl and O). Due to the absence of any significant anomalous scatterers in the molecule, the 758 Friedel pairs were merged before the final refinement.
Data collection: SMART (Siemens, 1996); cell
SMART (Siemens, 1996); data reduction: SAINT (Siemens, 1996); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure showing 30% probability displacement ellipsoids and the atom-numbering scheme. |
C12H12N2O3 | F(000) = 488 |
Mr = 232.24 | Dx = 1.408 Mg m−3 Dm = 1.408 Mg m−3 Dm measured by not measured |
Orthorhombic, Pna21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2c -2n | Cell parameters from 401 reflections |
a = 22.254 (5) Å | θ = 2.7–18.4° |
b = 10.178 (5) Å | µ = 0.10 mm−1 |
c = 4.836 (2) Å | T = 273 K |
V = 1095.4 (8) Å3 | Block, orange |
Z = 4 | 0.12 × 0.10 × 0.08 mm |
Bruker SMART CCD area-detector diffractometer | 1079 independent reflections |
Radiation source: sealed tube | 651 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.069 |
ϕ and ω scans | θmax = 25.1°, θmin = 1.8° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −26→12 |
Tmin = 0.988, Tmax = 0.992 | k = −11→10 |
3720 measured reflections | l = −5→5 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.050 | H-atom parameters constrained |
wR(F2) = 0.122 | w = 1/[σ2(Fo2) + (0.052P)2] where P = (Fo2 + 2Fc2)/3 |
S = 1.02 | (Δ/σ)max < 0.001 |
1079 reflections | Δρmax = 0.24 e Å−3 |
156 parameters | Δρmin = −0.19 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.009 (3) |
C12H12N2O3 | V = 1095.4 (8) Å3 |
Mr = 232.24 | Z = 4 |
Orthorhombic, Pna21 | Mo Kα radiation |
a = 22.254 (5) Å | µ = 0.10 mm−1 |
b = 10.178 (5) Å | T = 273 K |
c = 4.836 (2) Å | 0.12 × 0.10 × 0.08 mm |
Bruker SMART CCD area-detector diffractometer | 1079 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 651 reflections with I > 2σ(I) |
Tmin = 0.988, Tmax = 0.992 | Rint = 0.069 |
3720 measured reflections |
R[F2 > 2σ(F2)] = 0.050 | 0 restraints |
wR(F2) = 0.122 | H-atom parameters constrained |
S = 1.02 | Δρmax = 0.24 e Å−3 |
1079 reflections | Δρmin = −0.19 e Å−3 |
156 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.38927 (16) | 0.1624 (3) | 0.1475 (8) | 0.0589 (12) | |
H1 | 0.3605 | 0.1711 | 0.0433 | 0.088* | |
O2 | 0.47481 (17) | 0.1609 (3) | 0.5178 (8) | 0.0642 (12) | |
O3 | 0.19927 (17) | 0.2331 (3) | −0.6386 (9) | 0.0630 (12) | |
N1 | 0.30586 (18) | 0.2894 (4) | −0.1253 (10) | 0.0435 (11) | |
N2 | 0.2451 (2) | 0.1937 (4) | −0.4528 (11) | 0.0600 (14) | |
C1 | 0.3990 (2) | 0.2760 (5) | 0.2836 (10) | 0.0439 (14) | |
C2 | 0.4440 (2) | 0.2775 (5) | 0.4844 (12) | 0.0493 (15) | |
C3 | 0.4554 (2) | 0.3904 (5) | 0.6332 (11) | 0.0507 (14) | |
H3 | 0.4856 | 0.3913 | 0.7660 | 0.061* | |
C4 | 0.4214 (2) | 0.5035 (5) | 0.5842 (12) | 0.0521 (15) | |
H4 | 0.4286 | 0.5792 | 0.6867 | 0.062* | |
C5 | 0.3773 (2) | 0.5031 (5) | 0.3843 (12) | 0.0488 (13) | |
H5 | 0.3551 | 0.5790 | 0.3520 | 0.059* | |
C6 | 0.3655 (2) | 0.3901 (5) | 0.2295 (10) | 0.0408 (13) | |
C7 | 0.5192 (3) | 0.1552 (6) | 0.7308 (13) | 0.0709 (19) | |
H7A | 0.5505 | 0.2174 | 0.6920 | 0.106* | |
H7B | 0.5359 | 0.0683 | 0.7384 | 0.106* | |
H7C | 0.5009 | 0.1760 | 0.9054 | 0.106* | |
C8 | 0.3197 (2) | 0.3922 (5) | 0.0215 (11) | 0.0448 (13) | |
H8 | 0.2990 | 0.4702 | −0.0098 | 0.054* | |
C9 | 0.2608 (2) | 0.3021 (5) | −0.3245 (11) | 0.0457 (14) | |
C10 | 0.2266 (2) | 0.4109 (5) | −0.4155 (12) | 0.0512 (15) | |
H10 | 0.2295 | 0.4971 | −0.3536 | 0.061* | |
C11 | 0.1892 (2) | 0.3643 (5) | −0.6087 (11) | 0.0464 (14) | |
C12 | 0.1426 (2) | 0.4195 (6) | −0.7923 (12) | 0.0658 (18) | |
H12A | 0.1372 | 0.3628 | −0.9489 | 0.099* | |
H12B | 0.1548 | 0.5050 | −0.8544 | 0.099* | |
H12C | 0.1054 | 0.4266 | −0.6928 | 0.099* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.069 (3) | 0.040 (2) | 0.068 (3) | 0.0036 (19) | −0.016 (2) | −0.009 (2) |
O2 | 0.068 (3) | 0.056 (2) | 0.069 (3) | 0.016 (2) | −0.019 (2) | −0.004 (2) |
O3 | 0.070 (3) | 0.049 (2) | 0.070 (3) | −0.006 (2) | −0.013 (2) | −0.007 (2) |
N1 | 0.045 (3) | 0.036 (2) | 0.049 (2) | −0.002 (2) | −0.002 (2) | −0.003 (2) |
N2 | 0.068 (3) | 0.041 (3) | 0.071 (3) | −0.009 (2) | −0.027 (3) | 0.002 (3) |
C1 | 0.046 (3) | 0.041 (3) | 0.045 (3) | −0.009 (3) | −0.004 (3) | 0.000 (3) |
C2 | 0.049 (4) | 0.044 (3) | 0.056 (4) | 0.003 (3) | 0.007 (3) | −0.001 (3) |
C3 | 0.048 (3) | 0.055 (3) | 0.049 (3) | −0.003 (3) | −0.002 (3) | −0.005 (3) |
C4 | 0.060 (4) | 0.044 (3) | 0.052 (3) | −0.009 (3) | 0.006 (3) | −0.002 (3) |
C5 | 0.056 (3) | 0.036 (3) | 0.055 (3) | −0.001 (3) | 0.000 (4) | −0.004 (3) |
C6 | 0.041 (3) | 0.034 (3) | 0.047 (3) | 0.002 (3) | 0.003 (3) | 0.001 (2) |
C7 | 0.069 (4) | 0.078 (4) | 0.065 (4) | 0.027 (3) | −0.011 (4) | −0.002 (4) |
C8 | 0.042 (3) | 0.038 (3) | 0.055 (3) | 0.004 (3) | 0.004 (3) | 0.000 (3) |
C9 | 0.050 (4) | 0.038 (3) | 0.049 (3) | −0.007 (3) | 0.008 (3) | −0.003 (3) |
C10 | 0.056 (4) | 0.039 (3) | 0.059 (4) | 0.007 (3) | −0.003 (3) | −0.007 (3) |
C11 | 0.047 (4) | 0.045 (3) | 0.048 (3) | −0.001 (3) | 0.007 (3) | −0.006 (3) |
C12 | 0.064 (4) | 0.073 (4) | 0.061 (4) | 0.008 (3) | −0.011 (4) | −0.005 (4) |
O1—C1 | 1.348 (5) | C4—H4 | 0.9300 |
O1—H1 | 0.8200 | C5—C6 | 1.397 (7) |
O2—C2 | 1.379 (6) | C5—H5 | 0.9300 |
O2—C7 | 1.428 (6) | C6—C8 | 1.433 (7) |
O3—C11 | 1.362 (6) | C7—H7A | 0.9600 |
O3—N2 | 1.417 (6) | C7—H7B | 0.9600 |
N1—C8 | 1.301 (6) | C7—H7C | 0.9600 |
N1—C9 | 1.397 (7) | C8—H8 | 0.9300 |
N2—C9 | 1.313 (5) | C9—C10 | 1.413 (6) |
C1—C2 | 1.395 (7) | C10—C11 | 1.338 (7) |
C1—C6 | 1.405 (7) | C10—H10 | 0.9300 |
C2—C3 | 1.379 (7) | C11—C12 | 1.477 (7) |
C3—C4 | 1.397 (7) | C12—H12A | 0.9600 |
C3—H3 | 0.9300 | C12—H12B | 0.9600 |
C4—C5 | 1.377 (7) | C12—H12C | 0.9600 |
C4···C8i | 3.298 (6) | C6···C9i | 3.299 (6) |
C1—O1—H1 | 109.5 | O2—C7—H7B | 109.5 |
C2—O2—C7 | 117.5 (4) | H7A—C7—H7B | 109.5 |
C11—O3—N2 | 109.2 (4) | O2—C7—H7C | 109.5 |
C8—N1—C9 | 118.2 (4) | H7A—C7—H7C | 109.5 |
C9—N2—O3 | 104.7 (4) | H7B—C7—H7C | 109.5 |
O1—C1—C2 | 117.7 (5) | N1—C8—C6 | 122.6 (5) |
O1—C1—C6 | 122.2 (5) | N1—C8—H8 | 118.7 |
C2—C1—C6 | 120.1 (5) | C6—C8—H8 | 118.7 |
O2—C2—C3 | 124.4 (5) | N2—C9—N1 | 116.0 (5) |
O2—C2—C1 | 115.4 (5) | N2—C9—C10 | 111.6 (5) |
C3—C2—C1 | 120.2 (5) | N1—C9—C10 | 132.3 (5) |
C2—C3—C4 | 119.9 (5) | C11—C10—C9 | 106.0 (5) |
C2—C3—H3 | 120.0 | C11—C10—H10 | 127.0 |
C4—C3—H3 | 120.0 | C9—C10—H10 | 127.0 |
C5—C4—C3 | 120.1 (5) | C10—C11—O3 | 108.6 (5) |
C5—C4—H4 | 119.9 | C10—C11—C12 | 136.3 (5) |
C3—C4—H4 | 119.9 | O3—C11—C12 | 115.1 (5) |
C4—C5—C6 | 120.8 (5) | C11—C12—H12A | 109.5 |
C4—C5—H5 | 119.6 | C11—C12—H12B | 109.5 |
C6—C5—H5 | 119.6 | H12A—C12—H12B | 109.5 |
C5—C6—C1 | 118.8 (5) | C11—C12—H12C | 109.5 |
C5—C6—C8 | 119.8 (5) | H12A—C12—H12C | 109.5 |
C1—C6—C8 | 121.4 (5) | H12B—C12—H12C | 109.5 |
O2—C7—H7A | 109.5 | ||
C11—O3—N2—C9 | −0.8 (5) | O1—C1—C6—C8 | −1.2 (7) |
C7—O2—C2—C3 | 3.5 (8) | C2—C1—C6—C8 | 179.0 (4) |
C7—O2—C2—C1 | −176.8 (4) | C9—N1—C8—C6 | −179.5 (4) |
O1—C1—C2—O2 | 1.2 (7) | C5—C6—C8—N1 | −178.6 (5) |
C6—C1—C2—O2 | −179.0 (5) | C1—C6—C8—N1 | 1.0 (7) |
O1—C1—C2—C3 | −179.0 (5) | O3—N2—C9—N1 | 179.6 (4) |
C6—C1—C2—C3 | 0.8 (7) | O3—N2—C9—C10 | 0.8 (6) |
O2—C2—C3—C4 | −179.8 (5) | C8—N1—C9—N2 | −175.0 (5) |
C1—C2—C3—C4 | 0.5 (8) | C8—N1—C9—C10 | 3.5 (8) |
C2—C3—C4—C5 | −1.1 (8) | N2—C9—C10—C11 | −0.5 (6) |
C3—C4—C5—C6 | 0.5 (8) | N1—C9—C10—C11 | −179.0 (5) |
C4—C5—C6—C1 | 0.8 (7) | C9—C10—C11—O3 | −0.1 (5) |
C4—C5—C6—C8 | −179.6 (4) | C9—C10—C11—C12 | −178.7 (6) |
O1—C1—C6—C5 | 178.4 (5) | N2—O3—C11—C10 | 0.6 (5) |
C2—C1—C6—C5 | −1.4 (7) | N2—O3—C11—C12 | 179.5 (4) |
Symmetry code: (i) x, y, z+1. |
Experimental details
Crystal data | |
Chemical formula | C12H12N2O3 |
Mr | 232.24 |
Crystal system, space group | Orthorhombic, Pna21 |
Temperature (K) | 273 |
a, b, c (Å) | 22.254 (5), 10.178 (5), 4.836 (2) |
V (Å3) | 1095.4 (8) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.12 × 0.10 × 0.08 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.988, 0.992 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3720, 1079, 651 |
Rint | 0.069 |
(sin θ/λ)max (Å−1) | 0.596 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.050, 0.122, 1.02 |
No. of reflections | 1079 |
No. of parameters | 156 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.24, −0.19 |
Computer programs: SMART (Siemens, 1996), SAINT (Siemens, 1996), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
C4···C8i | 3.298 (6) | C6···C9i | 3.299 (6) |
Symmetry code: (i) x, y, z+1. |
Acknowledgements
The authors thank the Postgraduate Foundation of Taishan University for financial support (grant No. Y06-2-12).
References
Garnovskii, A. D., Nivorozhkin, A. L. & Minkin, V. I. (1993). Coord. Chem. Rev. 126, 1–69. CrossRef CAS Web of Science Google Scholar
Li, J., Zhao, R. & Ma, C. (2007). Acta Cryst. E63, o4923. Web of Science CSD CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Siemens (1996). SMART and SAINT. Siemens Analytical X-ray Instruments Inc., Madison, Wisconsin, USA. Google Scholar
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Recently, a number of Schiff-bases have been investigated in terms of their crystallography and coordination chemistry (Garnovskii et al., 1993). In continuation of our studies of Schiff-bases, we report here the synthesis and crystal structure of the title compound, (I).
In (I) (Fig. 1), the geometric parameters are in good agreement with those found in 2,4-di-tert-butyl-6-(4-chlorophenyliminomethyl)phenol (Li et al., 2007). The benzene and the isoxazole rings make a dihedral angle of 5.9 (6)°. The hydroxy group is involved in intramolecular O—H···N hydrogen bond (Table 2). In the crystal, the molecules related by translation along c axis are stacked into columns with the shortest intermolecular C···C distance of 3.298 (6) Å (Table 1), suggesting an existence of π···π interactions.