organic compounds
1-Ethyl-6-fluoro-7-(4-methylpiperazin-4-ium-1-yl)-4-oxo-1,4-dihydroquinoline-3-carboxylate hexahydrate
aSchool of Pharmaceutical Science, Harbin Medical University, Harbin, 150086, People's Republic of China, and bSecond Hospital, Harbin Medical University, Harbin, 150086, People's Republic of China
*Correspondence e-mail: liangqingcheng@126.com
In the title compound, C17H20FN3O3·6H2O, the pefloxacin (pef) neutral zwitterion is accompanied by six water molecules of hydration. An extensive network of O—H⋯O and N—H⋯O hydrogen bonds help to establish the crystal packing.
Related literature
For metal complexes of the pef anion, see: Baenziger et al. (1986); An, Huang & Qi (2007); An, Qi & Huang (2007). For background on the medicinal uses of Hpef, see: Mizuki et al. (1996).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 1998); cell SAINT-Plus (Bruker, 1998); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Bruker, 1998); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536808000421/hb2680sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808000421/hb2680Isup2.hkl
A mixture of Ni(NO3)2.6H2O (0.075 g, 0.25 mmol), Hpef (0.17 g, 0.5 mmol), and water (12 ml) was stirred for 30 min in air. The mixture was then transferred to a 23 ml Teflon-lined hydrothermal bomb. The bomb was kept at 423 K for 72 h under autogenous pressure. The targeted Ni2+ complex was not synthesized and colorless prisms of (I) were obtained from the reaction mixture after cooling.
The carbon-bound H atoms were positioned geometrically (C—H = 0.93–0.97 Å) and were included in the
in the riding model approximation, with Uiso(H) = 1.2Ueq(C). The O– and N-bonded H atoms were located in a difference map, and were refined with a distance restraint of N—H = 0.90 (1) /%A and with Uiso(H) = 1.5Ueq(N) and O—H = 0.85 (1) /%A and with Uiso(H) = 1.5Ueq(O). Some short intermolecular H···H contacts occur; thus, the H atom positions of the water molecules should be regarded as less reliable.Data collection: SMART (Bruker, 1998); cell
SAINT-Plus (Bruker, 1998); data reduction: SAINT-Plus (Bruker, 1998); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Bruker, 1998); software used to prepare material for publication: SHELXTL (Bruker, 1998).C17H20FN3O3·6H2O | F(000) = 944 |
Mr = 441.46 | Dx = 1.394 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 10069 reflections |
a = 8.0925 (15) Å | θ = 2.1–25.1° |
b = 24.075 (5) Å | µ = 0.12 mm−1 |
c = 10.8006 (19) Å | T = 296 K |
β = 92.064 (3)° | Prism, colorless |
V = 2102.9 (7) Å3 | 0.34 × 0.26 × 0.18 mm |
Z = 4 |
Bruker SMART CCD diffractometer | 3743 independent reflections |
Radiation source: fine-focus sealed tube | 2239 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.051 |
ω scans | θmax = 25.1°, θmin = 2.1° |
Absorption correction: multi-scan (SADABS; Bruker, 1998) | h = −9→9 |
Tmin = 0.960, Tmax = 0.978 | k = −25→28 |
10920 measured reflections | l = −8→12 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.048 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.134 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0593P)2 + 0.0315P] where P = (Fo2 + 2Fc2)/3 |
3743 reflections | (Δ/σ)max < 0.001 |
312 parameters | Δρmax = 0.22 e Å−3 |
19 restraints | Δρmin = −0.20 e Å−3 |
C17H20FN3O3·6H2O | V = 2102.9 (7) Å3 |
Mr = 441.46 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 8.0925 (15) Å | µ = 0.12 mm−1 |
b = 24.075 (5) Å | T = 296 K |
c = 10.8006 (19) Å | 0.34 × 0.26 × 0.18 mm |
β = 92.064 (3)° |
Bruker SMART CCD diffractometer | 3743 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 1998) | 2239 reflections with I > 2σ(I) |
Tmin = 0.960, Tmax = 0.978 | Rint = 0.051 |
10920 measured reflections |
R[F2 > 2σ(F2)] = 0.048 | 19 restraints |
wR(F2) = 0.134 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | Δρmax = 0.22 e Å−3 |
3743 reflections | Δρmin = −0.20 e Å−3 |
312 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
F1 | 0.4982 (2) | 0.12293 (6) | 0.56081 (13) | 0.0524 (5) | |
O1 | 0.9475 (3) | −0.18675 (8) | 0.62111 (17) | 0.0512 (5) | |
O2 | 0.9816 (3) | −0.13364 (8) | 0.78658 (17) | 0.0548 (6) | |
O3 | 0.7598 (2) | −0.04158 (7) | 0.76314 (16) | 0.0436 (5) | |
O1W | 1.0319 (4) | −0.28815 (9) | 0.7094 (2) | 0.0761 (7) | |
H1W1 | 1.010 (5) | −0.2538 (6) | 0.695 (3) | 0.114* | |
H1W2 | 1.104 (4) | −0.2906 (13) | 0.768 (3) | 0.114* | |
O2W | 1.0567 (3) | −0.19330 (10) | 0.9952 (2) | 0.0687 (7) | |
H2W1 | 1.042 (4) | −0.1772 (13) | 0.9256 (17) | 0.103* | |
H2W2 | 1.121 (4) | −0.1734 (12) | 1.042 (2) | 0.103* | |
O3W | 1.2764 (3) | −0.26876 (9) | 0.92250 (17) | 0.0558 (6) | |
H3W2 | 1.318 (4) | −0.2872 (11) | 0.9835 (19) | 0.084* | |
H3W1 | 1.204 (3) | −0.2460 (12) | 0.950 (2) | 0.084* | |
O4W | 0.6261 (3) | 0.02774 (10) | 0.9339 (2) | 0.0637 (6) | |
O5W | 1.0677 (3) | −0.04707 (12) | 0.9484 (2) | 0.0817 (8) | |
H5W1 | 1.022 (4) | −0.0705 (13) | 0.899 (3) | 0.123* | |
H5W2 | 0.997 (3) | −0.0308 (15) | 0.990 (4) | 0.123* | |
O6W | 1.2719 (3) | −0.13973 (11) | 1.1601 (3) | 0.0914 (9) | |
H6W1 | 1.360 (3) | −0.1585 (13) | 1.176 (4) | 0.137* | |
H6W2 | 1.298 (5) | −0.1066 (7) | 1.143 (4) | 0.137* | |
N1 | 0.8676 (2) | −0.05154 (8) | 0.39571 (18) | 0.0325 (5) | |
N2 | 0.5711 (3) | 0.12232 (8) | 0.31502 (18) | 0.0351 (5) | |
N3 | 0.4587 (3) | 0.20866 (9) | 0.1516 (2) | 0.0399 (6) | |
H3N | 0.552 (2) | 0.2224 (11) | 0.119 (2) | 0.060* | |
C1 | 0.9405 (3) | −0.14034 (11) | 0.6754 (3) | 0.0361 (6) | |
C2 | 0.8807 (3) | −0.09193 (10) | 0.6006 (2) | 0.0318 (6) | |
C3 | 0.7935 (3) | −0.04596 (10) | 0.6512 (2) | 0.0320 (6) | |
C4 | 0.7415 (3) | −0.00337 (10) | 0.5619 (2) | 0.0303 (6) | |
C5 | 0.6494 (3) | 0.04228 (10) | 0.6011 (2) | 0.0350 (6) | |
H5 | 0.6234 | 0.0454 | 0.6840 | 0.042* | |
C6 | 0.5981 (3) | 0.08168 (11) | 0.5202 (2) | 0.0354 (6) | |
C7 | 0.6356 (3) | 0.08101 (11) | 0.3938 (2) | 0.0327 (6) | |
C8 | 0.7274 (3) | 0.03613 (10) | 0.3540 (2) | 0.0318 (6) | |
H8 | 0.7556 | 0.0341 | 0.2714 | 0.038* | |
C9 | 0.7785 (3) | −0.00614 (10) | 0.4361 (2) | 0.0294 (6) | |
C10 | 0.9112 (3) | −0.09195 (10) | 0.4773 (2) | 0.0337 (6) | |
H10 | 0.9671 | −0.1225 | 0.4467 | 0.040* | |
C11 | 0.6038 (3) | 0.18058 (10) | 0.3458 (2) | 0.0404 (7) | |
H11B | 0.7100 | 0.1916 | 0.3149 | 0.048* | |
H11A | 0.6076 | 0.1853 | 0.4351 | 0.048* | |
C12 | 0.4696 (4) | 0.21632 (11) | 0.2885 (2) | 0.0422 (7) | |
H12B | 0.3646 | 0.2067 | 0.3233 | 0.051* | |
H12A | 0.4924 | 0.2550 | 0.3076 | 0.051* | |
C13 | 0.4413 (3) | 0.14871 (11) | 0.1185 (2) | 0.0390 (7) | |
H13B | 0.4475 | 0.1445 | 0.0295 | 0.047* | |
H13A | 0.3338 | 0.1355 | 0.1424 | 0.047* | |
C14 | 0.5745 (3) | 0.11382 (11) | 0.1818 (2) | 0.0391 (7) | |
H14B | 0.5560 | 0.0749 | 0.1627 | 0.047* | |
H14A | 0.6818 | 0.1243 | 0.1522 | 0.047* | |
C15 | 0.3210 (4) | 0.24236 (14) | 0.0946 (3) | 0.0607 (9) | |
H15A | 0.3180 | 0.2374 | 0.0064 | 0.091* | |
H15B | 0.3387 | 0.2809 | 0.1138 | 0.091* | |
H15C | 0.2179 | 0.2305 | 0.1270 | 0.091* | |
C16 | 0.9107 (3) | −0.05917 (12) | 0.2649 (2) | 0.0390 (7) | |
H16B | 1.0083 | −0.0824 | 0.2617 | 0.047* | |
H16A | 0.9375 | −0.0233 | 0.2299 | 0.047* | |
C17 | 0.7735 (4) | −0.08525 (15) | 0.1874 (3) | 0.0642 (10) | |
H17A | 0.7489 | −0.1213 | 0.2198 | 0.096* | |
H17B | 0.8072 | −0.0888 | 0.1035 | 0.096* | |
H17C | 0.6766 | −0.0623 | 0.1895 | 0.096* | |
H4W1 | 0.657 (4) | 0.0071 (13) | 0.874 (2) | 0.096* | |
H4W2 | 0.709 (3) | 0.0325 (14) | 0.984 (2) | 0.096* |
U11 | U22 | U33 | U12 | U13 | U23 | |
F1 | 0.0657 (11) | 0.0498 (11) | 0.0420 (10) | 0.0227 (9) | 0.0072 (8) | −0.0003 (7) |
O1 | 0.0692 (14) | 0.0320 (12) | 0.0515 (13) | 0.0057 (10) | −0.0116 (10) | 0.0010 (9) |
O2 | 0.0748 (15) | 0.0505 (13) | 0.0380 (13) | 0.0082 (11) | −0.0155 (10) | 0.0037 (9) |
O3 | 0.0604 (13) | 0.0411 (12) | 0.0293 (11) | 0.0039 (10) | 0.0017 (9) | 0.0017 (8) |
O1W | 0.097 (2) | 0.0451 (14) | 0.0843 (19) | −0.0009 (14) | −0.0253 (14) | 0.0077 (12) |
O2W | 0.0744 (18) | 0.0650 (16) | 0.0660 (16) | 0.0009 (13) | −0.0099 (13) | 0.0230 (12) |
O3W | 0.0567 (15) | 0.0574 (15) | 0.0531 (14) | −0.0038 (11) | −0.0015 (10) | 0.0151 (10) |
O4W | 0.0667 (15) | 0.0719 (17) | 0.0519 (15) | 0.0112 (13) | −0.0060 (11) | −0.0213 (11) |
O5W | 0.091 (2) | 0.081 (2) | 0.0720 (19) | −0.0046 (16) | −0.0108 (14) | −0.0229 (12) |
O6W | 0.107 (2) | 0.0690 (18) | 0.096 (2) | 0.0147 (16) | −0.0310 (17) | −0.0081 (16) |
N1 | 0.0363 (13) | 0.0324 (12) | 0.0290 (12) | 0.0011 (10) | 0.0018 (9) | −0.0018 (10) |
N2 | 0.0484 (14) | 0.0282 (12) | 0.0280 (12) | −0.0011 (11) | −0.0074 (10) | −0.0007 (9) |
N3 | 0.0408 (15) | 0.0389 (14) | 0.0400 (14) | 0.0036 (11) | 0.0015 (11) | 0.0076 (10) |
C1 | 0.0346 (16) | 0.0341 (16) | 0.0395 (17) | −0.0036 (13) | −0.0005 (12) | 0.0017 (13) |
C2 | 0.0330 (15) | 0.0322 (15) | 0.0298 (15) | −0.0020 (12) | −0.0040 (11) | 0.0008 (11) |
C3 | 0.0324 (15) | 0.0327 (15) | 0.0305 (15) | −0.0051 (12) | −0.0031 (11) | −0.0002 (12) |
C4 | 0.0325 (15) | 0.0285 (14) | 0.0295 (14) | −0.0049 (12) | −0.0025 (11) | −0.0001 (11) |
C5 | 0.0409 (16) | 0.0380 (16) | 0.0258 (14) | 0.0016 (13) | −0.0013 (11) | −0.0029 (12) |
C6 | 0.0377 (16) | 0.0359 (16) | 0.0325 (15) | 0.0056 (13) | −0.0003 (12) | −0.0046 (12) |
C7 | 0.0316 (14) | 0.0332 (15) | 0.0327 (15) | −0.0062 (12) | −0.0045 (11) | 0.0026 (12) |
C8 | 0.0338 (15) | 0.0317 (15) | 0.0299 (14) | −0.0024 (12) | 0.0026 (11) | 0.0000 (11) |
C9 | 0.0278 (14) | 0.0304 (14) | 0.0299 (14) | −0.0053 (12) | 0.0009 (11) | −0.0011 (11) |
C10 | 0.0340 (15) | 0.0266 (14) | 0.0405 (16) | 0.0019 (12) | −0.0015 (12) | −0.0020 (12) |
C11 | 0.0492 (18) | 0.0333 (16) | 0.0378 (16) | −0.0046 (14) | −0.0090 (12) | −0.0014 (12) |
C12 | 0.0522 (19) | 0.0367 (16) | 0.0379 (17) | 0.0030 (14) | 0.0035 (13) | −0.0014 (12) |
C13 | 0.0450 (17) | 0.0415 (17) | 0.0304 (15) | −0.0026 (14) | −0.0021 (12) | 0.0020 (12) |
C14 | 0.0504 (17) | 0.0338 (16) | 0.0329 (16) | 0.0014 (13) | −0.0010 (12) | 0.0005 (12) |
C15 | 0.053 (2) | 0.061 (2) | 0.068 (2) | 0.0162 (17) | −0.0062 (16) | 0.0190 (16) |
C16 | 0.0476 (17) | 0.0404 (16) | 0.0294 (15) | 0.0017 (13) | 0.0086 (12) | −0.0007 (12) |
C17 | 0.073 (2) | 0.077 (2) | 0.0430 (19) | −0.019 (2) | 0.0019 (16) | −0.0111 (16) |
F1—C6 | 1.363 (3) | C3—C4 | 1.459 (3) |
C1—O1 | 1.264 (3) | C4—C5 | 1.402 (3) |
C1—O2 | 1.245 (3) | C4—C9 | 1.404 (3) |
C3—O3 | 1.253 (3) | C5—C6 | 1.345 (3) |
O1W—H1W1 | 0.857 (10) | C5—H5 | 0.9300 |
O1W—H1W2 | 0.85 (3) | C6—C7 | 1.409 (3) |
O2W—H2W1 | 0.851 (10) | C7—C8 | 1.388 (3) |
O2W—H2W2 | 0.86 (3) | C8—C9 | 1.402 (3) |
O3W—H3W2 | 0.852 (10) | C8—H8 | 0.9300 |
O3W—H3W1 | 0.86 (3) | C10—H10 | 0.9300 |
O4W—H4W1 | 0.86 (3) | C11—C12 | 1.501 (4) |
O4W—H4W2 | 0.851 (10) | C11—H11B | 0.9700 |
O5W—H5W1 | 0.85 (3) | C11—H11A | 0.9700 |
O5W—H5W2 | 0.84 (3) | C12—H12B | 0.9700 |
O6W—H6W1 | 0.86 (3) | C12—H12A | 0.9700 |
O6W—H6W2 | 0.847 (10) | C13—C14 | 1.510 (4) |
N1—C10 | 1.351 (3) | C13—H13B | 0.9700 |
N1—C9 | 1.388 (3) | C13—H13A | 0.9700 |
N1—C16 | 1.479 (3) | C14—H14B | 0.9700 |
N2—C7 | 1.397 (3) | C14—H14A | 0.9700 |
N2—C14 | 1.454 (3) | C15—H15A | 0.9600 |
N2—C11 | 1.463 (3) | C15—H15B | 0.9600 |
N3—C12 | 1.490 (3) | C15—H15C | 0.9600 |
N3—C13 | 1.492 (3) | C16—C17 | 1.504 (4) |
N3—C15 | 1.493 (3) | C16—H16B | 0.9700 |
N3—H3N | 0.910 (10) | C16—H16A | 0.9700 |
C1—C2 | 1.489 (4) | C17—H17A | 0.9600 |
C2—C10 | 1.363 (3) | C17—H17B | 0.9600 |
C2—C3 | 1.431 (3) | C17—H17C | 0.9600 |
H1W1—O1W—H1W2 | 109.3 (17) | N1—C10—C2 | 125.8 (2) |
H2W1—O2W—H2W2 | 109.4 (16) | N1—C10—H10 | 117.1 |
H3W2—O3W—H3W1 | 108.6 (16) | C2—C10—H10 | 117.1 |
H4W1—O4W—H4W2 | 108.2 (16) | N2—C11—C12 | 109.5 (2) |
H5W1—O5W—H5W2 | 110.9 (18) | N2—C11—H11B | 109.8 |
H6W1—O6W—H6W2 | 109.4 (17) | C12—C11—H11B | 109.8 |
C10—N1—C9 | 119.2 (2) | N2—C11—H11A | 109.8 |
C10—N1—C16 | 118.0 (2) | C12—C11—H11A | 109.8 |
C9—N1—C16 | 122.7 (2) | H11B—C11—H11A | 108.2 |
C7—N2—C14 | 118.8 (2) | N3—C12—C11 | 110.8 (2) |
C7—N2—C11 | 118.89 (19) | N3—C12—H12B | 109.5 |
C14—N2—C11 | 110.49 (19) | C11—C12—H12B | 109.5 |
C12—N3—C13 | 111.04 (19) | N3—C12—H12A | 109.5 |
C12—N3—C15 | 111.0 (2) | C11—C12—H12A | 109.5 |
C13—N3—C15 | 111.4 (2) | H12B—C12—H12A | 108.1 |
C12—N3—H3N | 108.4 (19) | N3—C13—C14 | 111.7 (2) |
C13—N3—H3N | 109.5 (19) | N3—C13—H13B | 109.3 |
C15—N3—H3N | 105.3 (19) | C14—C13—H13B | 109.3 |
O2—C1—O1 | 123.2 (2) | N3—C13—H13A | 109.3 |
O2—C1—C2 | 119.5 (2) | C14—C13—H13A | 109.3 |
O1—C1—C2 | 117.3 (2) | H13B—C13—H13A | 107.9 |
C10—C2—C3 | 118.9 (2) | N2—C14—C13 | 109.3 (2) |
C10—C2—C1 | 117.6 (2) | N2—C14—H14B | 109.8 |
C3—C2—C1 | 123.6 (2) | C13—C14—H14B | 109.8 |
O3—C3—C2 | 124.1 (2) | N2—C14—H14A | 109.8 |
O3—C3—C4 | 120.7 (2) | C13—C14—H14A | 109.8 |
C2—C3—C4 | 115.2 (2) | H14B—C14—H14A | 108.3 |
C5—C4—C9 | 117.6 (2) | N3—C15—H15A | 109.5 |
C5—C4—C3 | 119.7 (2) | N3—C15—H15B | 109.5 |
C9—C4—C3 | 122.7 (2) | H15A—C15—H15B | 109.5 |
C6—C5—C4 | 120.8 (2) | N3—C15—H15C | 109.5 |
C6—C5—H5 | 119.6 | H15A—C15—H15C | 109.5 |
C4—C5—H5 | 119.6 | H15B—C15—H15C | 109.5 |
C5—C6—F1 | 118.5 (2) | N1—C16—C17 | 112.9 (2) |
C5—C6—C7 | 123.3 (2) | N1—C16—H16B | 109.0 |
F1—C6—C7 | 118.1 (2) | C17—C16—H16B | 109.0 |
C8—C7—N2 | 123.9 (2) | N1—C16—H16A | 109.0 |
C8—C7—C6 | 116.4 (2) | C17—C16—H16A | 109.0 |
N2—C7—C6 | 119.5 (2) | H16B—C16—H16A | 107.8 |
C7—C8—C9 | 121.2 (2) | C16—C17—H17A | 109.5 |
C7—C8—H8 | 119.4 | C16—C17—H17B | 109.5 |
C9—C8—H8 | 119.4 | H17A—C17—H17B | 109.5 |
N1—C9—C8 | 121.2 (2) | C16—C17—H17C | 109.5 |
N1—C9—C4 | 118.2 (2) | H17A—C17—H17C | 109.5 |
C8—C9—C4 | 120.6 (2) | H17B—C17—H17C | 109.5 |
O2—C1—C2—C10 | 149.2 (3) | C10—N1—C9—C8 | −178.5 (2) |
O1—C1—C2—C10 | −30.5 (3) | C16—N1—C9—C8 | −1.6 (3) |
O2—C1—C2—C3 | −30.8 (4) | C10—N1—C9—C4 | 1.9 (3) |
O1—C1—C2—C3 | 149.5 (2) | C16—N1—C9—C4 | 178.8 (2) |
C10—C2—C3—O3 | −179.6 (2) | C7—C8—C9—N1 | 178.8 (2) |
C1—C2—C3—O3 | 0.5 (4) | C7—C8—C9—C4 | −1.7 (3) |
C10—C2—C3—C4 | 1.5 (3) | C5—C4—C9—N1 | −179.1 (2) |
C1—C2—C3—C4 | −178.4 (2) | C3—C4—C9—N1 | 0.3 (3) |
O3—C3—C4—C5 | −1.5 (3) | C5—C4—C9—C8 | 1.3 (3) |
C2—C3—C4—C5 | 177.4 (2) | C3—C4—C9—C8 | −179.3 (2) |
O3—C3—C4—C9 | 179.1 (2) | C9—N1—C10—C2 | −2.5 (4) |
C2—C3—C4—C9 | −2.0 (3) | C16—N1—C10—C2 | −179.6 (2) |
C9—C4—C5—C6 | 0.3 (4) | C3—C2—C10—N1 | 0.6 (4) |
C3—C4—C5—C6 | −179.1 (2) | C1—C2—C10—N1 | −179.4 (2) |
C4—C5—C6—F1 | 175.0 (2) | C7—N2—C11—C12 | −154.7 (2) |
C4—C5—C6—C7 | −1.7 (4) | C14—N2—C11—C12 | 62.7 (3) |
C14—N2—C7—C8 | 11.0 (4) | C13—N3—C12—C11 | 53.2 (3) |
C11—N2—C7—C8 | −128.5 (3) | C15—N3—C12—C11 | 177.7 (2) |
C14—N2—C7—C6 | −164.6 (2) | N2—C11—C12—N3 | −58.1 (3) |
C11—N2—C7—C6 | 56.0 (3) | C12—N3—C13—C14 | −52.3 (3) |
C5—C6—C7—C8 | 1.3 (4) | C15—N3—C13—C14 | −176.6 (2) |
F1—C6—C7—C8 | −175.4 (2) | C7—N2—C14—C13 | 156.2 (2) |
C5—C6—C7—N2 | 177.2 (2) | C11—N2—C14—C13 | −61.2 (3) |
F1—C6—C7—N2 | 0.4 (3) | N3—C13—C14—N2 | 56.0 (3) |
N2—C7—C8—C9 | −175.3 (2) | C10—N1—C16—C17 | 93.5 (3) |
C6—C7—C8—C9 | 0.4 (3) | C9—N1—C16—C17 | −83.4 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1W1···O1 | 0.86 (1) | 1.87 (1) | 2.700 (3) | 164 (3) |
O1W—H1W2···O3W | 0.85 (3) | 2.20 (2) | 3.017 (3) | 162 (3) |
O2W—H2W1···O2 | 0.85 (1) | 1.88 (1) | 2.722 (3) | 170 (4) |
O2W—H2W2···O6W | 0.86 (3) | 1.91 (3) | 2.765 (3) | 171 (3) |
O3W—H3W2···O1i | 0.85 (1) | 1.90 (1) | 2.730 (3) | 166 (3) |
O3W—H3W1···O2W | 0.86 (3) | 1.82 (3) | 2.679 (3) | 175 (3) |
O6W—H6W1···O1Wi | 0.86 (3) | 1.92 (3) | 2.765 (4) | 170 (4) |
O6W—H6W2···O4Wii | 0.85 (1) | 2.17 (3) | 3.007 (4) | 170 (4) |
N3—H3N···O3Wiii | 0.91 (1) | 1.85 (1) | 2.730 (3) | 163 (3) |
O4W—H4W1···O3 | 0.86 (3) | 1.89 (3) | 2.739 (3) | 169 (3) |
O4W—H4W2···O5Wii | 0.85 (3) | 1.96 (2) | 2.783 (3) | 163 (3) |
O5W—H5W1···O2 | 0.85 (3) | 1.97 (3) | 2.792 (3) | 164 (4) |
O5W—H5W1···O3 | 0.85 (3) | 2.63 (4) | 3.142 (3) | 120 (3) |
O5W—H5W2···O5Wii | 0.84 (3) | 2.06 (2) | 2.769 (5) | 142 (3) |
Symmetry codes: (i) x+1/2, −y−1/2, z+1/2; (ii) −x+2, −y, −z+2; (iii) −x+2, −y, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C17H20FN3O3·6H2O |
Mr | 441.46 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 296 |
a, b, c (Å) | 8.0925 (15), 24.075 (5), 10.8006 (19) |
β (°) | 92.064 (3) |
V (Å3) | 2102.9 (7) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.12 |
Crystal size (mm) | 0.34 × 0.26 × 0.18 |
Data collection | |
Diffractometer | Bruker SMART CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 1998) |
Tmin, Tmax | 0.960, 0.978 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10920, 3743, 2239 |
Rint | 0.051 |
(sin θ/λ)max (Å−1) | 0.597 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.048, 0.134, 1.02 |
No. of reflections | 3743 |
No. of parameters | 312 |
No. of restraints | 19 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.22, −0.20 |
Computer programs: SMART (Bruker, 1998), SAINT-Plus (Bruker, 1998), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Bruker, 1998).
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1W1···O1 | 0.857 (10) | 1.866 (12) | 2.700 (3) | 164 (3) |
O1W—H1W2···O3W | 0.85 (3) | 2.201 (16) | 3.017 (3) | 162 (3) |
O2W—H2W1···O2 | 0.851 (10) | 1.881 (13) | 2.722 (3) | 170 (4) |
O2W—H2W2···O6W | 0.86 (3) | 1.91 (3) | 2.765 (3) | 171 (3) |
O3W—H3W2···O1i | 0.852 (10) | 1.896 (13) | 2.730 (3) | 166 (3) |
O3W—H3W1···O2W | 0.86 (3) | 1.82 (3) | 2.679 (3) | 175 (3) |
O6W—H6W1···O1Wi | 0.86 (3) | 1.92 (3) | 2.765 (4) | 170 (4) |
O6W—H6W2···O4Wii | 0.847 (10) | 2.17 (3) | 3.007 (4) | 170 (4) |
N3—H3N···O3Wiii | 0.910 (10) | 1.847 (13) | 2.730 (3) | 163 (3) |
O4W—H4W1···O3 | 0.86 (3) | 1.89 (3) | 2.739 (3) | 169 (3) |
O4W—H4W2···O5Wii | 0.85 (3) | 1.959 (15) | 2.783 (3) | 163 (3) |
O5W—H5W1···O2 | 0.85 (3) | 1.97 (3) | 2.792 (3) | 164 (4) |
O5W—H5W1···O3 | 0.85 (3) | 2.63 (4) | 3.142 (3) | 120 (3) |
O5W—H5W2···O5Wii | 0.84 (3) | 2.06 (2) | 2.769 (5) | 142 (3) |
Symmetry codes: (i) x+1/2, −y−1/2, z+1/2; (ii) −x+2, −y, −z+2; (iii) −x+2, −y, −z+1. |
Acknowledgements
The authors acknowledge financial support by the Science Foundation of Heilongjiang Provincial Department of Science & Technology (grant No. GC07C35204).
References
An, Z., Huang, J. & Qi, W. (2007). Acta Cryst. E63, m2009. Web of Science CSD CrossRef IUCr Journals Google Scholar
An, Z., Qi, W. & Huang, J. (2007). Acta Cryst. E63, m2084–m2085. Web of Science CSD CrossRef IUCr Journals Google Scholar
Baenziger, N. C., Fox, C. L. & Modak, S. L. (1986). Acta Cryst. C42, 1505–1509. CSD CrossRef CAS Web of Science IUCr Journals Google Scholar
Bruker (1998). SMART, SAINT-Plus, SADABS and SHELXTL. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Mizuki, Y., Fujiwara, I. & Yamaguchi, T. (1996). J. Antimicrob. Chemother. 37 Suppl. A, 41–45. CrossRef Google Scholar
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Pefloxacin (Hpef, C17H20FN3O3, 1-ethyl-6-fluoro-7-(4-methylpiperazin-1-yl)-4-oxo-quinoline -3-carboxylic acid) is member of a class of quinolones used to treat infections (Mizuki et al., 1996). The silver(I), manganese(II) and cobalt(II) derivatives of the pefloxacin (pef) anion have been reported (Baenziger et al., 1986; An, Huang & Qi, 2007; An, Qi & Huang, 2007).
We attempted to prepare a nickel(II) complex of pef, but the title compound, (I), arose instead. The neutral Hpef zwitterion shows nominal proton transfer from O1 or O2 to N3. Consequently the C1—O1 [1.264 (3) Å] and C1—O2 [1.245 (3) Å] bond lengths are very similar. The bond angle sum for N1 of 360° indicates sp2 hybridization for this atom. The N2/N3/C11—C14 ring is a typical chair.
The components of (I) are linked by O—H···O and O—H···N hydrogen bonds (Table 1) involving all the potential donors, generating a three-dimensional supramolecular network.