metal-organic compounds
μ-4,4′-Bipyridine-κ2N:N′-bis[aqua(4,4′-bipyridine-κN)(L-valinato-κ2N,O)copper(II)] dinitrate dihydrate
aDepartment of Chemistry and Chemical Engineering, Minjiang University, Fuzhou 350108, People's Republic of China, and bState Key Laboratory of Structural Chemistry, FuJian Institute of Research on the Structure of Matter, Fuzhou 350002, People's Republic of China
*Correspondence e-mail: loubenyong@yahoo.com.cn
In the title dinuclear complex, [Cu2(C5H10NO2)2(C10H8N2)3(H2O)2](NO3)2·2H2O, each of the two L-valinate anions chelates a CuII center through the amino N and carboxylate O atom, forming a five-membered ring. A 4,4′-bipyridine molecule bridges two water-coordinated Cu atoms, each of which is connected to another 4,4′-bipyridine, giving rise to a square-pyramidal coordination geometry for the CuII centers. The dinuclear dications, nitrate anions and uncoordinated water molecules are linked into a two-dimensional structure.
Experimental
Crystal data
|
|
Data collection: CrystalClear (Rigaku, 2000); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536808002109/ng2423sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808002109/ng2423Isup2.hkl
To an aqueous solution (10 ml) of L-valine (29 mg, 0.25 mmol) and NaOH (10 mg, 0.25 mmol), Cu(NO3)2.3H2O (60 mg, 0.25 mmol) in water (10 ml) was added slowly. The reaction solution was stirred for half an hour and then 4,4'-bipyridine (39 mg, 0.25 mmol) in ethanol (5 ml) was added. The solution was kept in air and after several days blue crystals were obtained.
H atoms bonded to C or N were located geometrically (C—H = 0.95–1.00 Å, N—H = 0.92 Å) with Uiso(H) = 1.2 Ueq(C,N) or 1.5 Ueq(C). H atoms bonded to O were located by difference maps and constrained to ride on their parent atoms with Uiso(H) = 1.2 Ueq(O).
Data collection: CrystalClear (Rigaku, 2000); cell
CrystalClear (Rigaku, 2000); data reduction: CrystalClear (Rigaku, 2000); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).[Cu2(C5H10NO2)2(C10H8N2)3(H2O)2](NO3)2·2H2O | Z = 1 |
Mr = 1024.00 | F(000) = 532 |
Triclinic, P1 | Dx = 1.490 Mg m−3 |
Hall symbol: P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 8.9675 (14) Å | Cell parameters from 3138 reflections |
b = 9.6545 (16) Å | θ = 3.0–27.5° |
c = 13.9421 (15) Å | µ = 1.01 mm−1 |
α = 91.533 (5)° | T = 293 K |
β = 100.384 (4)° | Prism, blue |
γ = 105.393 (8)° | 0.20 × 0.15 × 0.13 mm |
V = 1141.2 (3) Å3 |
Rigaku Mercury CCD diffractometer | 6761 independent reflections |
Radiation source: fine-focus sealed tube | 5710 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.017 |
Detector resolution: 14.6306 pixels mm-1 | θmax = 27.5°, θmin = 3.0° |
CCD scans | h = −11→10 |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2000) | k = −12→11 |
Tmin = 0.824, Tmax = 0.880 | l = −18→18 |
8898 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.034 | H-atom parameters constrained |
wR(F2) = 0.086 | w = 1/[σ2(Fo2) + (0.0466P)2] where P = (Fo2 + 2Fc2)/3 |
S = 1.02 | (Δ/σ)max = 0.001 |
6761 reflections | Δρmax = 0.38 e Å−3 |
599 parameters | Δρmin = −0.34 e Å−3 |
3 restraints | Absolute structure: Flack (1983), 1599 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.006 (12) |
[Cu2(C5H10NO2)2(C10H8N2)3(H2O)2](NO3)2·2H2O | γ = 105.393 (8)° |
Mr = 1024.00 | V = 1141.2 (3) Å3 |
Triclinic, P1 | Z = 1 |
a = 8.9675 (14) Å | Mo Kα radiation |
b = 9.6545 (16) Å | µ = 1.01 mm−1 |
c = 13.9421 (15) Å | T = 293 K |
α = 91.533 (5)° | 0.20 × 0.15 × 0.13 mm |
β = 100.384 (4)° |
Rigaku Mercury CCD diffractometer | 6761 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2000) | 5710 reflections with I > 2σ(I) |
Tmin = 0.824, Tmax = 0.880 | Rint = 0.017 |
8898 measured reflections |
R[F2 > 2σ(F2)] = 0.034 | H-atom parameters constrained |
wR(F2) = 0.086 | Δρmax = 0.38 e Å−3 |
S = 1.02 | Δρmin = −0.34 e Å−3 |
6761 reflections | Absolute structure: Flack (1983), 1599 Friedel pairs |
599 parameters | Absolute structure parameter: 0.006 (12) |
3 restraints |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cu1 | 1.44365 (4) | 1.34168 (4) | 0.93159 (3) | 0.03451 (16) | |
Cu2 | 0.46068 (4) | 0.60988 (4) | 0.41250 (3) | 0.03179 (14) | |
O1 | 1.6220 (5) | 1.4275 (5) | 1.0358 (3) | 0.0414 (10) | |
O2 | 1.8726 (5) | 1.5493 (5) | 1.0699 (3) | 0.0547 (10) | |
O3 | 1.3283 (6) | 1.5205 (4) | 0.9533 (3) | 0.0489 (11) | |
H3A | 1.3230 | 1.5799 | 0.9068 | 0.079* | |
H3B | 1.2775 | 1.5435 | 0.9963 | 0.079* | |
O4 | 0.2748 (5) | 0.5222 (5) | 0.3128 (3) | 0.0401 (10) | |
O5 | 0.0406 (5) | 0.3648 (5) | 0.2886 (3) | 0.0562 (11) | |
O6 | 0.5689 (6) | 0.4220 (5) | 0.3910 (3) | 0.0513 (11) | |
H6A | 0.5718 | 0.3662 | 0.4372 | 0.079* | |
H6B | 0.6061 | 0.4008 | 0.3420 | 0.079* | |
O7 | 0.2765 (6) | 0.7359 (5) | 0.6583 (3) | 0.0569 (13) | |
O8 | 0.3912 (11) | 0.5947 (8) | 0.7363 (5) | 0.128 (3) | |
O9 | 0.3206 (10) | 0.7456 (7) | 0.8172 (4) | 0.105 (3) | |
O10 | 0.5740 (10) | 0.1982 (7) | 0.5340 (4) | 0.103 (2) | |
O11 | 0.6212 (7) | 0.2018 (6) | 0.6897 (4) | 0.0755 (16) | |
O12 | 0.5171 (11) | 0.3504 (9) | 0.6218 (5) | 0.133 (3) | |
O13 | 0.7221 (6) | 0.3668 (6) | 0.2437 (3) | 0.0617 (12) | |
H13A | 0.8153 | 0.3583 | 0.2568 | 0.079* | |
H13B | 0.6996 | 0.3801 | 0.1821 | 0.079* | |
O14 | 0.1903 (6) | 0.5750 (6) | 0.1060 (3) | 0.0594 (12) | |
H14B | 0.0888 | 0.5568 | 0.0890 | 0.079* | |
H14A | 0.1924 | 0.5122 | 0.1521 | 0.079* | |
N1 | 1.5915 (6) | 1.4398 (5) | 0.8460 (3) | 0.0375 (10) | |
H1A | 1.5804 | 1.3805 | 0.7909 | 0.045* | |
H1B | 1.5685 | 1.5234 | 0.8267 | 0.045* | |
N2 | 0.3291 (6) | 0.5138 (5) | 0.5031 (3) | 0.0387 (11) | |
H2A | 0.3902 | 0.4837 | 0.5541 | 0.046* | |
H2B | 0.2825 | 0.5769 | 0.5284 | 0.046* | |
N3 | 0.6375 (6) | 0.7231 (5) | 0.5173 (4) | 0.0322 (10) | |
N4 | 1.2736 (6) | 1.2338 (5) | 0.8221 (4) | 0.0331 (10) | |
N5 | 1.3457 (6) | 1.2108 (5) | 1.0285 (3) | 0.0365 (11) | |
N6 | 1.1150 (9) | 0.7765 (7) | 1.4081 (4) | 0.0727 (18) | |
N7 | 0.5556 (6) | 0.7360 (5) | 0.3126 (3) | 0.0357 (11) | |
N8 | 0.8214 (9) | 1.1567 (7) | −0.0611 (5) | 0.0682 (17) | |
N9 | 0.3331 (8) | 0.6965 (6) | 0.7384 (4) | 0.0563 (15) | |
N10 | 0.5720 (8) | 0.2485 (6) | 0.6131 (4) | 0.0542 (15) | |
C1 | 1.7529 (7) | 1.4877 (5) | 1.0111 (4) | 0.0347 (11) | |
C2 | 1.7546 (4) | 1.4731 (4) | 0.9019 (3) | 0.0356 (8) | |
H2 | 1.7908 | 1.3854 | 0.8914 | 0.043* | |
C3 | 1.8748 (6) | 1.5980 (6) | 0.8693 (4) | 0.0443 (12) | |
H3 | 1.9803 | 1.6063 | 0.9111 | 0.053* | |
C4 | 1.8349 (8) | 1.7429 (5) | 0.8827 (4) | 0.0742 (17) | |
H4A | 1.7400 | 1.7428 | 0.8351 | 0.111* | |
H4B | 1.9233 | 1.8222 | 0.8725 | 0.111* | |
H4C | 1.8161 | 1.7553 | 0.9491 | 0.111* | |
C5 | 1.8858 (7) | 1.5663 (5) | 0.7628 (3) | 0.0593 (12) | |
H5A | 1.9108 | 1.4741 | 0.7561 | 0.089* | |
H5B | 1.9689 | 1.6434 | 0.7443 | 0.089* | |
H5C | 1.7847 | 1.5612 | 0.7200 | 0.089* | |
C6 | 0.1648 (6) | 0.4266 (5) | 0.3431 (4) | 0.0354 (11) | |
C7 | 0.2064 (5) | 0.3883 (4) | 0.4487 (3) | 0.0373 (8) | |
H7 | 0.2583 | 0.3090 | 0.4457 | 0.045* | |
C8 | 0.0700 (6) | 0.3324 (6) | 0.5031 (4) | 0.0520 (13) | |
H8 | 0.1203 | 0.3210 | 0.5714 | 0.062* | |
C9 | −0.0243 (6) | 0.4340 (6) | 0.5120 (4) | 0.0728 (15) | |
H9A | 0.0430 | 0.5229 | 0.5493 | 0.109* | |
H9B | −0.1100 | 0.3905 | 0.5459 | 0.109* | |
H9C | −0.0689 | 0.4561 | 0.4466 | 0.109* | |
C10 | −0.0322 (7) | 0.1801 (6) | 0.4606 (5) | 0.0737 (17) | |
H10A | −0.1177 | 0.1476 | 0.4968 | 0.111* | |
H10B | 0.0334 | 0.1130 | 0.4667 | 0.111* | |
H10C | −0.0770 | 0.1833 | 0.3915 | 0.111* | |
C11 | 1.2950 (8) | 1.1217 (6) | 0.7721 (4) | 0.0415 (13) | |
H11 | 1.3985 | 1.1104 | 0.7797 | 0.050* | |
C12 | 1.1276 (7) | 1.2440 (6) | 0.8114 (4) | 0.0425 (13) | |
H12 | 1.1094 | 1.3214 | 0.8468 | 0.051* | |
C13 | 0.9983 (7) | 1.1477 (6) | 0.7511 (4) | 0.0434 (13) | |
H13 | 0.8960 | 1.1612 | 0.7449 | 0.052* | |
C14 | 1.1768 (7) | 1.0244 (7) | 0.7116 (5) | 0.0421 (14) | |
H14 | 1.1997 | 0.9496 | 0.6762 | 0.051* | |
C15 | 1.0217 (7) | 1.0321 (6) | 0.7004 (4) | 0.0307 (12) | |
C16 | 0.8883 (6) | 0.9223 (5) | 0.6389 (4) | 0.0273 (11) | |
C17 | 0.7350 (7) | 0.9183 (6) | 0.6421 (4) | 0.0414 (13) | |
H17 | 0.7128 | 0.9855 | 0.6846 | 0.050* | |
C18 | 0.6127 (7) | 0.8150 (6) | 0.5825 (4) | 0.0401 (13) | |
H18 | 0.5073 | 0.8094 | 0.5881 | 0.048* | |
C19 | 0.7872 (7) | 0.7270 (6) | 0.5165 (4) | 0.0403 (12) | |
H19 | 0.8072 | 0.6605 | 0.4724 | 0.048* | |
C20 | 0.9111 (7) | 0.8201 (6) | 0.5748 (4) | 0.0356 (11) | |
H20 | 1.0150 | 0.8161 | 0.5722 | 0.043* | |
C21 | 1.3459 (8) | 1.2699 (6) | 1.1170 (4) | 0.0429 (14) | |
H21 | 1.3816 | 1.3718 | 1.1289 | 0.052* | |
C22 | 1.2974 (8) | 1.1905 (6) | 1.1902 (4) | 0.0420 (14) | |
H22 | 1.2995 | 1.2377 | 1.2513 | 0.050* | |
C23 | 1.2924 (8) | 1.0656 (6) | 1.0143 (4) | 0.0463 (15) | |
H23 | 1.2868 | 1.0210 | 0.9516 | 0.056* | |
C24 | 1.2458 (9) | 0.9790 (6) | 1.0871 (4) | 0.0473 (17) | |
H24 | 1.2147 | 0.8771 | 1.0752 | 0.057* | |
C25 | 1.2447 (7) | 1.0414 (6) | 1.1769 (4) | 0.0363 (13) | |
C26 | 1.1970 (8) | 0.9493 (7) | 1.2579 (4) | 0.0400 (14) | |
C27 | 1.2756 (10) | 0.9897 (8) | 1.3550 (5) | 0.0521 (18) | |
H27 | 1.3574 | 1.0770 | 1.3719 | 0.063* | |
C28 | 1.2299 (10) | 0.8980 (9) | 1.4252 (5) | 0.0626 (19) | |
H28 | 1.2851 | 0.9242 | 1.4908 | 0.075* | |
C29 | 1.0786 (9) | 0.8260 (7) | 1.2401 (5) | 0.0475 (14) | |
H29 | 1.0222 | 0.7969 | 1.1751 | 0.057* | |
C30 | 1.0384 (10) | 0.7417 (7) | 1.3147 (6) | 0.068 (2) | |
H30 | 0.9537 | 0.6562 | 1.2997 | 0.082* | |
C31 | 0.5625 (8) | 0.6763 (6) | 0.2275 (4) | 0.0416 (14) | |
H31 | 0.5320 | 0.5741 | 0.2179 | 0.050* | |
C32 | 0.5987 (8) | 0.8792 (6) | 0.3249 (4) | 0.0427 (14) | |
H32 | 0.5925 | 0.9236 | 0.3851 | 0.051* | |
C33 | 0.6518 (8) | 0.9662 (6) | 0.2545 (4) | 0.0429 (15) | |
H33 | 0.6847 | 1.0680 | 0.2672 | 0.051* | |
C34 | 0.6119 (8) | 0.7547 (6) | 0.1514 (4) | 0.0429 (14) | |
H34 | 0.6147 | 0.7069 | 0.0915 | 0.052* | |
C35 | 0.6568 (7) | 0.9031 (6) | 0.1641 (4) | 0.0369 (13) | |
C36 | 0.7132 (8) | 0.9905 (6) | 0.0870 (4) | 0.0379 (13) | |
C37 | 0.8484 (8) | 1.1117 (7) | 0.1097 (5) | 0.0497 (15) | |
H37 | 0.9043 | 1.1397 | 0.1750 | 0.060* | |
C38 | 0.8942 (10) | 1.1870 (7) | 0.0314 (6) | 0.0642 (18) | |
H38 | 0.9855 | 1.2669 | 0.0456 | 0.077* | |
C39 | 0.6370 (9) | 0.9583 (7) | −0.0092 (5) | 0.0487 (16) | |
H39 | 0.5452 | 0.8793 | −0.0266 | 0.058* | |
C40 | 0.6957 (10) | 1.0424 (8) | −0.0802 (5) | 0.065 (2) | |
H40 | 0.6433 | 1.0170 | −0.1464 | 0.079* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cu1 | 0.0314 (4) | 0.0371 (3) | 0.0274 (3) | 0.0003 (3) | 0.0008 (3) | −0.0029 (3) |
Cu2 | 0.0285 (3) | 0.0338 (3) | 0.0265 (3) | 0.0000 (3) | 0.0015 (3) | −0.0010 (2) |
O1 | 0.034 (2) | 0.049 (2) | 0.030 (2) | −0.0082 (19) | 0.0049 (18) | −0.0027 (18) |
O2 | 0.0313 (19) | 0.076 (3) | 0.0424 (19) | −0.0012 (18) | −0.0050 (16) | −0.0032 (17) |
O3 | 0.065 (3) | 0.048 (2) | 0.039 (2) | 0.023 (2) | 0.012 (2) | −0.0023 (18) |
O4 | 0.033 (2) | 0.050 (2) | 0.030 (2) | 0.005 (2) | −0.0026 (18) | 0.0045 (18) |
O5 | 0.035 (2) | 0.067 (2) | 0.050 (2) | −0.0029 (18) | −0.0056 (17) | −0.0101 (17) |
O6 | 0.063 (3) | 0.055 (3) | 0.043 (2) | 0.026 (2) | 0.015 (2) | 0.0064 (19) |
O7 | 0.076 (4) | 0.070 (3) | 0.037 (2) | 0.040 (3) | 0.010 (2) | 0.009 (2) |
O8 | 0.188 (8) | 0.127 (5) | 0.092 (4) | 0.110 (6) | −0.018 (4) | 0.012 (4) |
O9 | 0.157 (8) | 0.111 (5) | 0.051 (3) | 0.043 (5) | 0.024 (4) | −0.004 (3) |
O10 | 0.141 (7) | 0.109 (5) | 0.055 (4) | 0.029 (5) | 0.018 (4) | −0.013 (3) |
O11 | 0.077 (4) | 0.085 (4) | 0.079 (4) | 0.043 (3) | 0.020 (3) | 0.029 (3) |
O12 | 0.197 (9) | 0.129 (5) | 0.096 (4) | 0.119 (6) | −0.026 (5) | 0.005 (4) |
O13 | 0.049 (3) | 0.093 (3) | 0.048 (2) | 0.026 (3) | 0.010 (2) | 0.010 (2) |
O14 | 0.050 (3) | 0.101 (3) | 0.036 (2) | 0.033 (3) | 0.014 (2) | 0.008 (2) |
N1 | 0.036 (2) | 0.044 (3) | 0.028 (2) | 0.001 (2) | 0.0062 (18) | 0.0043 (18) |
N2 | 0.033 (2) | 0.043 (3) | 0.030 (2) | −0.001 (2) | −0.0005 (18) | −0.0070 (19) |
N3 | 0.032 (2) | 0.031 (2) | 0.028 (2) | 0.0012 (19) | 0.0028 (19) | −0.0043 (18) |
N4 | 0.028 (2) | 0.035 (2) | 0.030 (2) | 0.0024 (19) | 0.0011 (19) | −0.0015 (19) |
N5 | 0.035 (3) | 0.035 (3) | 0.034 (2) | 0.003 (2) | 0.004 (2) | −0.004 (2) |
N6 | 0.111 (5) | 0.066 (4) | 0.057 (3) | 0.033 (4) | 0.044 (3) | 0.018 (3) |
N7 | 0.036 (3) | 0.035 (3) | 0.029 (2) | 0.000 (2) | 0.005 (2) | 0.001 (2) |
N8 | 0.097 (4) | 0.055 (3) | 0.075 (4) | 0.035 (3) | 0.049 (3) | 0.034 (3) |
N9 | 0.060 (4) | 0.069 (4) | 0.045 (3) | 0.030 (3) | 0.006 (3) | 0.011 (3) |
N10 | 0.057 (4) | 0.054 (3) | 0.049 (3) | 0.013 (3) | 0.007 (3) | 0.005 (3) |
C1 | 0.032 (2) | 0.042 (3) | 0.028 (2) | 0.010 (2) | 0.0005 (18) | −0.0002 (17) |
C2 | 0.035 (2) | 0.0362 (19) | 0.0352 (18) | 0.0093 (16) | 0.0049 (16) | 0.0037 (15) |
C3 | 0.034 (3) | 0.052 (3) | 0.044 (3) | 0.005 (2) | 0.010 (2) | 0.007 (2) |
C4 | 0.098 (5) | 0.038 (3) | 0.079 (4) | 0.006 (3) | 0.015 (4) | 0.012 (2) |
C5 | 0.074 (3) | 0.064 (3) | 0.044 (2) | 0.015 (3) | 0.027 (2) | 0.015 (2) |
C6 | 0.026 (2) | 0.036 (3) | 0.039 (2) | 0.0029 (19) | 0.0010 (19) | −0.0030 (18) |
C7 | 0.0327 (19) | 0.0370 (19) | 0.0382 (19) | 0.0045 (16) | 0.0049 (16) | −0.0011 (15) |
C8 | 0.042 (3) | 0.049 (3) | 0.056 (3) | −0.006 (2) | 0.015 (2) | 0.006 (2) |
C9 | 0.052 (3) | 0.082 (4) | 0.086 (4) | 0.010 (3) | 0.031 (3) | −0.001 (3) |
C10 | 0.072 (4) | 0.053 (3) | 0.078 (4) | −0.013 (3) | 0.013 (3) | 0.008 (3) |
C11 | 0.030 (3) | 0.050 (3) | 0.040 (3) | 0.012 (3) | −0.004 (2) | −0.013 (2) |
C12 | 0.037 (3) | 0.033 (2) | 0.050 (3) | 0.008 (2) | −0.003 (2) | −0.018 (2) |
C13 | 0.026 (2) | 0.048 (3) | 0.048 (3) | 0.008 (2) | −0.006 (2) | −0.014 (2) |
C14 | 0.022 (3) | 0.048 (3) | 0.053 (3) | 0.010 (2) | 0.000 (2) | −0.011 (2) |
C15 | 0.035 (3) | 0.035 (3) | 0.021 (2) | 0.010 (2) | 0.004 (2) | −0.001 (2) |
C16 | 0.026 (3) | 0.023 (2) | 0.029 (3) | 0.002 (2) | 0.003 (2) | 0.001 (2) |
C17 | 0.036 (3) | 0.048 (3) | 0.037 (3) | 0.011 (3) | 0.006 (2) | −0.022 (2) |
C18 | 0.029 (3) | 0.046 (3) | 0.043 (3) | 0.005 (2) | 0.008 (2) | −0.003 (2) |
C19 | 0.031 (3) | 0.044 (3) | 0.041 (2) | 0.004 (2) | 0.007 (2) | −0.009 (2) |
C20 | 0.030 (2) | 0.036 (2) | 0.040 (2) | 0.008 (2) | 0.010 (2) | −0.0094 (19) |
C21 | 0.048 (4) | 0.033 (3) | 0.039 (3) | −0.003 (3) | 0.009 (3) | −0.008 (2) |
C22 | 0.053 (4) | 0.036 (3) | 0.033 (3) | 0.010 (3) | 0.003 (3) | −0.007 (2) |
C23 | 0.061 (4) | 0.028 (3) | 0.040 (3) | −0.001 (3) | 0.006 (3) | −0.010 (2) |
C24 | 0.072 (5) | 0.030 (3) | 0.040 (3) | 0.009 (3) | 0.019 (3) | 0.000 (3) |
C25 | 0.029 (3) | 0.030 (3) | 0.048 (3) | 0.002 (2) | 0.010 (3) | 0.005 (2) |
C26 | 0.042 (3) | 0.045 (3) | 0.039 (3) | 0.016 (3) | 0.018 (3) | 0.005 (2) |
C27 | 0.055 (4) | 0.061 (4) | 0.042 (4) | 0.020 (4) | 0.006 (3) | 0.002 (3) |
C28 | 0.084 (5) | 0.084 (5) | 0.036 (3) | 0.043 (4) | 0.021 (3) | 0.012 (3) |
C29 | 0.053 (3) | 0.046 (3) | 0.044 (3) | 0.010 (3) | 0.015 (3) | 0.004 (2) |
C30 | 0.093 (5) | 0.042 (3) | 0.077 (4) | 0.009 (3) | 0.049 (4) | 0.008 (3) |
C31 | 0.052 (4) | 0.031 (3) | 0.037 (3) | 0.006 (3) | 0.005 (3) | 0.000 (2) |
C32 | 0.056 (4) | 0.046 (3) | 0.030 (3) | 0.014 (3) | 0.018 (3) | 0.002 (2) |
C33 | 0.052 (4) | 0.030 (3) | 0.041 (3) | 0.002 (3) | 0.010 (3) | −0.003 (3) |
C34 | 0.055 (4) | 0.035 (3) | 0.036 (3) | 0.001 (3) | 0.020 (3) | −0.007 (2) |
C35 | 0.037 (3) | 0.046 (3) | 0.024 (2) | 0.009 (3) | 0.000 (2) | −0.001 (2) |
C36 | 0.048 (4) | 0.027 (3) | 0.038 (3) | 0.011 (2) | 0.006 (3) | 0.003 (2) |
C37 | 0.046 (3) | 0.043 (3) | 0.060 (4) | 0.010 (3) | 0.015 (3) | 0.010 (3) |
C38 | 0.078 (4) | 0.047 (3) | 0.074 (4) | 0.014 (3) | 0.033 (4) | 0.019 (3) |
C39 | 0.060 (5) | 0.050 (4) | 0.038 (3) | 0.014 (3) | 0.015 (3) | 0.004 (3) |
C40 | 0.107 (6) | 0.063 (4) | 0.042 (3) | 0.044 (4) | 0.023 (4) | 0.014 (3) |
Cu1—O1 | 1.937 (5) | C8—C9 | 1.471 (7) |
Cu1—N4 | 1.993 (5) | C8—C10 | 1.548 (8) |
Cu1—N1 | 2.011 (5) | C8—H8 | 1.0000 |
Cu1—N5 | 2.031 (5) | C9—H9A | 0.9800 |
Cu1—O3 | 2.275 (4) | C9—H9B | 0.9800 |
Cu2—O4 | 1.944 (5) | C9—H9C | 0.9800 |
Cu2—N2 | 1.967 (5) | C10—H10A | 0.9800 |
Cu2—N3 | 2.001 (5) | C10—H10B | 0.9800 |
Cu2—N7 | 2.028 (5) | C10—H10C | 0.9800 |
Cu2—O6 | 2.308 (4) | C11—C14 | 1.351 (9) |
O1—C1 | 1.276 (7) | C11—H11 | 0.9500 |
O2—C1 | 1.223 (7) | C12—C13 | 1.396 (8) |
O3—H3A | 0.8807 | C12—H12 | 0.9500 |
O3—H3B | 0.8719 | C13—C15 | 1.388 (7) |
O4—C6 | 1.300 (7) | C13—H13 | 0.9500 |
O5—C6 | 1.221 (7) | C14—C15 | 1.393 (8) |
O6—H6A | 0.8522 | C14—H14 | 0.9500 |
O6—H6B | 0.8556 | C15—C16 | 1.483 (4) |
O7—N9 | 1.252 (6) | C16—C17 | 1.374 (8) |
O8—N9 | 1.230 (7) | C16—C20 | 1.393 (7) |
O9—N9 | 1.220 (7) | C17—C18 | 1.391 (9) |
O10—N10 | 1.198 (7) | C17—H17 | 0.9500 |
O11—N10 | 1.224 (7) | C18—H18 | 0.9500 |
O12—N10 | 1.224 (7) | C19—C20 | 1.344 (8) |
O13—H13A | 0.8487 | C19—H19 | 0.9500 |
O13—H13B | 0.8665 | C20—H20 | 0.9500 |
O14—H14B | 0.8663 | C21—C22 | 1.357 (8) |
O14—H14A | 0.8976 | C21—H21 | 0.9500 |
N1—C2 | 1.475 (6) | C22—C25 | 1.387 (8) |
N1—H1A | 0.9200 | C22—H22 | 0.9500 |
N1—H1B | 0.9200 | C23—C24 | 1.384 (8) |
N2—C7 | 1.481 (6) | C23—H23 | 0.9500 |
N2—H2A | 0.9200 | C24—C25 | 1.377 (8) |
N2—H2B | 0.9200 | C24—H24 | 0.9500 |
N3—C19 | 1.335 (8) | C25—C26 | 1.508 (7) |
N3—C18 | 1.340 (7) | C26—C29 | 1.351 (9) |
N4—C12 | 1.322 (8) | C26—C27 | 1.401 (9) |
N4—C11 | 1.347 (7) | C27—C28 | 1.382 (10) |
N5—C21 | 1.344 (7) | C27—H27 | 0.9500 |
N5—C23 | 1.353 (7) | C28—H28 | 0.9500 |
N6—C28 | 1.323 (10) | C29—C30 | 1.378 (9) |
N6—C30 | 1.346 (10) | C29—H29 | 0.9500 |
N7—C31 | 1.325 (7) | C30—H30 | 0.9500 |
N7—C32 | 1.330 (7) | C31—C34 | 1.389 (8) |
N8—C38 | 1.323 (10) | C31—H31 | 0.9500 |
N8—C40 | 1.333 (10) | C32—C33 | 1.377 (8) |
C1—C2 | 1.529 (6) | C32—H32 | 0.9500 |
C2—C3 | 1.529 (6) | C33—C35 | 1.398 (8) |
C2—H2 | 1.0000 | C33—H33 | 0.9500 |
C3—C5 | 1.533 (7) | C34—C35 | 1.379 (8) |
C3—C4 | 1.547 (7) | C34—H34 | 0.9500 |
C3—H3 | 1.0000 | C35—C36 | 1.463 (7) |
C4—H4A | 0.9800 | C36—C39 | 1.376 (8) |
C4—H4B | 0.9800 | C36—C37 | 1.424 (9) |
C4—H4C | 0.9800 | C37—C38 | 1.391 (9) |
C5—H5A | 0.9800 | C37—H37 | 0.9500 |
C5—H5B | 0.9800 | C38—H38 | 0.9500 |
C5—H5C | 0.9800 | C39—C40 | 1.386 (9) |
C6—C7 | 1.533 (6) | C39—H39 | 0.9500 |
C7—C8 | 1.539 (6) | C40—H40 | 0.9500 |
C7—H7 | 1.0000 | ||
O1—Cu1—N4 | 172.71 (19) | C10—C8—H8 | 106.0 |
O1—Cu1—N1 | 83.15 (19) | C8—C9—H9A | 109.5 |
N4—Cu1—N1 | 95.7 (2) | C8—C9—H9B | 109.5 |
O1—Cu1—N5 | 88.54 (19) | H9A—C9—H9B | 109.5 |
N4—Cu1—N5 | 90.7 (2) | C8—C9—H9C | 109.5 |
N1—Cu1—N5 | 162.53 (18) | H9A—C9—H9C | 109.5 |
O1—Cu1—O3 | 92.32 (18) | H9B—C9—H9C | 109.5 |
N4—Cu1—O3 | 94.97 (18) | C8—C10—H10A | 109.5 |
N1—Cu1—O3 | 98.71 (17) | C8—C10—H10B | 109.5 |
N5—Cu1—O3 | 96.94 (17) | H10A—C10—H10B | 109.5 |
O4—Cu2—N2 | 84.0 (2) | C8—C10—H10C | 109.5 |
O4—Cu2—N3 | 171.74 (19) | H10A—C10—H10C | 109.5 |
N2—Cu2—N3 | 95.2 (2) | H10B—C10—H10C | 109.5 |
O4—Cu2—N7 | 89.66 (19) | N4—C11—C14 | 123.3 (6) |
N2—Cu2—N7 | 165.8 (2) | N4—C11—H11 | 118.3 |
N3—Cu2—N7 | 89.2 (2) | C14—C11—H11 | 118.3 |
O4—Cu2—O6 | 92.17 (18) | N4—C12—C13 | 123.9 (5) |
N2—Cu2—O6 | 95.07 (18) | N4—C12—H12 | 118.1 |
N3—Cu2—O6 | 96.10 (18) | C13—C12—H12 | 118.1 |
N7—Cu2—O6 | 97.82 (17) | C15—C13—C12 | 119.0 (5) |
C1—O1—Cu1 | 117.2 (4) | C15—C13—H13 | 120.5 |
Cu1—O3—H3A | 117.6 | C12—C13—H13 | 120.5 |
Cu1—O3—H3B | 135.4 | C11—C14—C15 | 120.9 (5) |
H3A—O3—H3B | 106.8 | C11—C14—H14 | 119.5 |
C6—O4—Cu2 | 114.9 (3) | C15—C14—H14 | 119.5 |
Cu2—O6—H6A | 116.5 | C13—C15—C14 | 116.2 (5) |
Cu2—O6—H6B | 128.1 | C13—C15—C16 | 121.6 (4) |
H6A—O6—H6B | 115.4 | C14—C15—C16 | 122.2 (4) |
H13A—O13—H13B | 108.7 | C17—C16—C20 | 116.8 (5) |
H14B—O14—H14A | 97.6 | C17—C16—C15 | 120.9 (4) |
C2—N1—Cu1 | 108.7 (3) | C20—C16—C15 | 122.3 (4) |
C2—N1—H1A | 109.9 | C16—C17—C18 | 119.4 (5) |
Cu1—N1—H1A | 109.9 | C16—C17—H17 | 120.3 |
C2—N1—H1B | 109.9 | C18—C17—H17 | 120.3 |
Cu1—N1—H1B | 109.9 | N3—C18—C17 | 122.7 (6) |
H1A—N1—H1B | 108.3 | N3—C18—H18 | 118.7 |
C7—N2—Cu2 | 108.5 (3) | C17—C18—H18 | 118.7 |
C7—N2—H2A | 110.0 | N3—C19—C20 | 123.5 (5) |
Cu2—N2—H2A | 110.0 | N3—C19—H19 | 118.2 |
C7—N2—H2B | 110.0 | C20—C19—H19 | 118.2 |
Cu2—N2—H2B | 110.0 | C19—C20—C16 | 120.5 (5) |
H2A—N2—H2B | 108.4 | C19—C20—H20 | 119.7 |
C19—N3—C18 | 116.9 (5) | C16—C20—H20 | 119.7 |
C19—N3—Cu2 | 121.5 (4) | N5—C21—C22 | 123.0 (5) |
C18—N3—Cu2 | 120.8 (4) | N5—C21—H21 | 118.5 |
C12—N4—C11 | 116.6 (5) | C22—C21—H21 | 118.5 |
C12—N4—Cu1 | 122.1 (4) | C21—C22—C25 | 120.8 (5) |
C11—N4—Cu1 | 119.3 (4) | C21—C22—H22 | 119.6 |
C21—N5—C23 | 116.7 (5) | C25—C22—H22 | 119.6 |
C21—N5—Cu1 | 118.3 (4) | N5—C23—C24 | 122.8 (5) |
C23—N5—Cu1 | 124.7 (4) | N5—C23—H23 | 118.6 |
C28—N6—C30 | 116.4 (6) | C24—C23—H23 | 118.6 |
C31—N7—C32 | 117.4 (5) | C25—C24—C23 | 119.7 (5) |
C31—N7—Cu2 | 119.6 (4) | C25—C24—H24 | 120.2 |
C32—N7—Cu2 | 122.6 (4) | C23—C24—H24 | 120.2 |
C38—N8—C40 | 116.7 (6) | C24—C25—C22 | 117.0 (5) |
O9—N9—O8 | 118.8 (6) | C24—C25—C26 | 120.7 (5) |
O9—N9—O7 | 123.0 (5) | C22—C25—C26 | 122.3 (5) |
O8—N9—O7 | 117.8 (6) | C29—C26—C27 | 117.7 (6) |
O10—N10—O12 | 121.0 (6) | C29—C26—C25 | 121.8 (6) |
O10—N10—O11 | 123.4 (6) | C27—C26—C25 | 120.5 (6) |
O12—N10—O11 | 115.6 (6) | C28—C27—C26 | 117.6 (7) |
O2—C1—O1 | 123.3 (5) | C28—C27—H27 | 121.2 |
O2—C1—C2 | 120.9 (5) | C26—C27—H27 | 121.2 |
O1—C1—C2 | 115.8 (5) | N6—C28—C27 | 125.0 (7) |
N1—C2—C1 | 109.2 (4) | N6—C28—H28 | 117.5 |
N1—C2—C3 | 116.2 (3) | C27—C28—H28 | 117.5 |
C1—C2—C3 | 113.1 (4) | C26—C29—C30 | 121.1 (7) |
N1—C2—H2 | 105.8 | C26—C29—H29 | 119.5 |
C1—C2—H2 | 105.8 | C30—C29—H29 | 119.5 |
C3—C2—H2 | 105.8 | N6—C30—C29 | 122.2 (7) |
C2—C3—C5 | 110.2 (4) | N6—C30—H30 | 118.9 |
C2—C3—C4 | 111.7 (4) | C29—C30—H30 | 118.9 |
C5—C3—C4 | 111.0 (4) | N7—C31—C34 | 123.7 (5) |
C2—C3—H3 | 107.9 | N7—C31—H31 | 118.2 |
C5—C3—H3 | 107.9 | C34—C31—H31 | 118.2 |
C4—C3—H3 | 107.9 | N7—C32—C33 | 123.2 (5) |
C3—C4—H4A | 109.5 | N7—C32—H32 | 118.4 |
C3—C4—H4B | 109.5 | C33—C32—H32 | 118.4 |
H4A—C4—H4B | 109.5 | C32—C33—C35 | 119.3 (5) |
C3—C4—H4C | 109.5 | C32—C33—H33 | 120.4 |
H4A—C4—H4C | 109.5 | C35—C33—H33 | 120.4 |
H4B—C4—H4C | 109.5 | C35—C34—C31 | 118.9 (5) |
C3—C5—H5A | 109.5 | C35—C34—H34 | 120.5 |
C3—C5—H5B | 109.5 | C31—C34—H34 | 120.5 |
H5A—C5—H5B | 109.5 | C34—C35—C33 | 117.4 (5) |
C3—C5—H5C | 109.5 | C34—C35—C36 | 121.0 (5) |
H5A—C5—H5C | 109.5 | C33—C35—C36 | 121.5 (5) |
H5B—C5—H5C | 109.5 | C39—C36—C37 | 118.3 (5) |
O5—C6—O4 | 121.9 (5) | C39—C36—C35 | 121.1 (6) |
O5—C6—C7 | 122.3 (5) | C37—C36—C35 | 120.7 (5) |
O4—C6—C7 | 115.7 (5) | C38—C37—C36 | 116.5 (7) |
N2—C7—C6 | 107.5 (4) | C38—C37—H37 | 121.7 |
N2—C7—C8 | 112.4 (4) | C36—C37—H37 | 121.7 |
C6—C7—C8 | 117.7 (4) | N8—C38—C37 | 125.5 (7) |
N2—C7—H7 | 106.1 | N8—C38—H38 | 117.3 |
C6—C7—H7 | 106.1 | C37—C38—H38 | 117.3 |
C8—C7—H7 | 106.1 | C36—C39—C40 | 119.3 (7) |
C9—C8—C7 | 114.0 (4) | C36—C39—H39 | 120.4 |
C9—C8—C10 | 112.8 (5) | C40—C39—H39 | 120.4 |
C7—C8—C10 | 111.5 (4) | N8—C40—C39 | 123.8 (7) |
C9—C8—H8 | 106.0 | N8—C40—H40 | 118.1 |
C7—C8—H8 | 106.0 | C39—C40—H40 | 118.1 |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2A···O12 | 0.92 | 2.07 | 2.936 (7) | 156 |
O6—H6A···O10 | 0.85 | 2.14 | 2.983 (7) | 170 |
O6—H6B···O13 | 0.86 | 1.93 | 2.782 (6) | 171 |
O14—H14A···O4 | 0.90 | 2.22 | 2.941 (6) | 137 |
O14—H14B···O2i | 0.87 | 1.89 | 2.745 (7) | 168 |
O13—H13A···O5ii | 0.85 | 1.97 | 2.816 (7) | 173 |
O13—H13B···O1iii | 0.87 | 2.14 | 2.997 (6) | 172 |
N1—H1B···O8iv | 0.92 | 2.12 | 2.892 (7) | 141 |
O3—H3A···O9iv | 0.88 | 2.06 | 2.930 (7) | 170 |
O3—H3B···O14v | 0.87 | 1.89 | 2.752 (6) | 169 |
Symmetry codes: (i) x−2, y−1, z−1; (ii) x+1, y, z; (iii) x−1, y−1, z−1; (iv) x+1, y+1, z; (v) x+1, y+1, z+1. |
Experimental details
Crystal data | |
Chemical formula | [Cu2(C5H10NO2)2(C10H8N2)3(H2O)2](NO3)2·2H2O |
Mr | 1024.00 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 8.9675 (14), 9.6545 (16), 13.9421 (15) |
α, β, γ (°) | 91.533 (5), 100.384 (4), 105.393 (8) |
V (Å3) | 1141.2 (3) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 1.01 |
Crystal size (mm) | 0.20 × 0.15 × 0.13 |
Data collection | |
Diffractometer | Rigaku Mercury CCD diffractometer |
Absorption correction | Multi-scan (CrystalClear; Rigaku, 2000) |
Tmin, Tmax | 0.824, 0.880 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8898, 6761, 5710 |
Rint | 0.017 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.034, 0.086, 1.02 |
No. of reflections | 6761 |
No. of parameters | 599 |
No. of restraints | 3 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.38, −0.34 |
Absolute structure | Flack (1983), 1599 Friedel pairs |
Absolute structure parameter | 0.006 (12) |
Computer programs: CrystalClear (Rigaku, 2000), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001).
Cu1—O1 | 1.937 (5) | Cu2—O4 | 1.944 (5) |
Cu1—N4 | 1.993 (5) | Cu2—N2 | 1.967 (5) |
Cu1—N1 | 2.011 (5) | Cu2—N3 | 2.001 (5) |
Cu1—N5 | 2.031 (5) | Cu2—N7 | 2.028 (5) |
Cu1—O3 | 2.275 (4) | Cu2—O6 | 2.308 (4) |
O1—Cu1—N4 | 172.71 (19) | O4—Cu2—N2 | 84.0 (2) |
O1—Cu1—N1 | 83.15 (19) | O4—Cu2—N3 | 171.74 (19) |
N4—Cu1—N1 | 95.7 (2) | N2—Cu2—N3 | 95.2 (2) |
O1—Cu1—N5 | 88.54 (19) | O4—Cu2—N7 | 89.66 (19) |
N4—Cu1—N5 | 90.7 (2) | N2—Cu2—N7 | 165.8 (2) |
N1—Cu1—N5 | 162.53 (18) | N3—Cu2—N7 | 89.2 (2) |
O1—Cu1—O3 | 92.32 (18) | O4—Cu2—O6 | 92.17 (18) |
N4—Cu1—O3 | 94.97 (18) | N2—Cu2—O6 | 95.07 (18) |
N1—Cu1—O3 | 98.71 (17) | N3—Cu2—O6 | 96.10 (18) |
N5—Cu1—O3 | 96.94 (17) | N7—Cu2—O6 | 97.82 (17) |
Acknowledgements
B-YL acknowledges grants from the Project of the Natural Science Foundation of Fujian Province, China (E0610024) and the Research Project of the Education Bureau of Fujian Province, China (JA06052).
References
Barbour, L. J. (2001). J. Supramol. Chem. 1, 189–191. CrossRef CAS Google Scholar
Flack, H. D. (1983). Acta Cryst. A39, 876–881. CrossRef CAS Web of Science IUCr Journals Google Scholar
Rigaku (2000). CrystalClear. Version 1.3. Rigaku Corporation, Tokyo, Japan. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Yamauchi, O., Odani, A. & Takani, M. (2002). J. Chem. Soc. Dalton Trans. pp. 3411–3421. CrossRef Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Metal–amino acid complexes have been attracting considerable interests due to their structural feature and biological relevance (Yamauchi et al., 2002). In the contribution, we report the title binuclear complex (I) in which there exist various hydrogen-bonding interactions cooperatively engineering the binuclear unit into ordered supramolecular structure.
In the structure of (I), deprotonated L-valine chelates CuII center through amino N and carboxylic O to form a five-membered ring of CuII-amino acid. One bridging 4,4'-bipyridine molecule connects two CuII-amino acid units into a chiral cation binuclear complex and two terminal 4,4'-bipyridine and two water molecules complete the square-pyramidal coordination geometry of CuII center (Fig1). Nitrate anion as H-bonded acceptors is simultaneously hydrogen-bonded to amino N and coordinated water (O3—H3A···O9; N1—H1B···O8; O6—H6A···O10; N2—H2A··· O12; Table 2). Solvent water molecule is simultaneously hydrogen-bonded to coordinated water and two symmetry-related carboxylic groups (O6—H6B···O13; O13—H13A···O5; O13—H13B···O1; O14—H14A···O4; O14—H14B···O2; O3—H3B···O14; Table 2). As a result, two solvent water, two coordinated water and two CuII -amino acid unit form a supramolecular synthon R44(12). And two solvent water and two carboxylic groups form another synthon R44(12). The two synthons connect the binuclear unit parallel to each other into a two-dimensional structure (Fig2). Moreover, two deprotonated L-valine in the binuclear unit are involved in different weak hydrogen-bonding interactions with terminal 4,4'- bipyridine. One interacts with 4,4'-bipyridine through C—H···N interactions between the C—H group of L-valine and N atom of 4,4'-bipyridine (C2—H2···N8). And the other is involved in C—H···O interactions with 4,4'-bipyridine between carboxylic O atom of L-valine and C—H group of 4,4'-bipyridine (C37—H37 ···O5). The bridging 4,4'-bipyridine is also involved in C—H···O interactions with two nitrate anions (C11—H11···O11; C13—H13···O11; C17—H17··· O11; C14—H14···O7; C18—H18···O7). The C—H···O(N) interactions connect the layers into ordered packing structure (Fig. 3).