organic compounds
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[(2-{[3′,6′-Bis(ethylamino)-2′,7′-dimethyl-3-oxospiro[1H-isoindole-1,9′-9H-xanthen]-2-yl}ethyl)aminomethyl]phenol
aState Key Laboratory of Fine Chemicals, Dalian University of Technology, 158 Zhongshan Road, Dalian 116012, People's Republic of China
*Correspondence e-mail: pengxj@dlut.edu.cn
The title compound, C35H38N4O3, was prepared as a spirolactam ring formation of rhodamine dye for comparison with a ring-opened form. The xanthene ring system is approximately planar. The dihedral angles formed by the spirolactam and phenol rings with the xanthene ring system are 85.7 and 109.4°, respectively. Each of the molecules in the contains one intramolecular O—H⋯N hydrogen bond, and they form intermolecular N—H⋯O hydrogen-bonded chains along the [100] direction. Weak intermolecular C—H⋯O hydrogen-bonding contacts connect the infinite chains via crystallographic inversion centres to form a two-dimensional network.
Related literature
For related literature, see: Kwon et al. (2005); Wu et al. (2007); De Silva et al. (1997).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2005); cell SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Bruker, 1997); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536807068742/si2058sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536807068742/si2058Isup2.hkl
N-(rhodamine-6 G) lactam-ethylenediamine (500 mg, 1.2 mmol) was dissolved in 20 ml of methanol, followed by addition of 2-hydroxybenzaldehyde (146 mg, 1.2 mmol). The yellow solution was mixed for 1 h at room temperature, and then added NaBH4 until the reactant disappeared on TLC. The solvent was removed by rotatory evaporation. The resulting crude product was purified by
to give 317 mg of the title compound (white solid) in 47.1% yield. Single crystals suitable for X-ray measurements were obtained from hexane/dichloromethane (1:1, v/v) solution by slow evaporation at room temperature.The H atoms attached to C, N and O atoms were placed in geometrically calculated positions (C—H = 0.93–0.97 Å, N—H = 0.86 Å and O—H = 0.82 Å) and refined as riding, with Uiso(H) = 1.2Ueq (C, N) or 1.5Ueq (methyl C, O).
Data collection: APEX2 (Bruker, 2005); cell
SAINT (Bruker, 2001); data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Bruker, 1997); software used to prepare material for publication: SHELXTL (Bruker, 1997).Fig. 1. The molecular structure of the title compound, with displacement ellipsoids drawn at 30% probability level. |
C35H36N4O3 | Z = 2 |
Mr = 560.68 | F(000) = 596 |
Triclinic, P1 | Dx = 1.240 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 11.6453 (5) Å | Cell parameters from 2891 reflections |
b = 11.8588 (3) Å | θ = 2.7–27.2° |
c = 12.9822 (3) Å | µ = 0.08 mm−1 |
α = 116.321 (1)° | T = 273 K |
β = 103.173 (2)° | Block, white |
γ = 98.337 (2)° | 0.30 × 0.30 × 0.25 mm |
V = 1501.21 (8) Å3 |
Bruker APEXII CCD area-detector diffractometer | 5018 independent reflections |
Radiation source: fine-focus sealed tube | 3667 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.020 |
ϕ and ω scans | θmax = 25.0°, θmin = 2.7° |
Absorption correction: multi-scan (SADABS; Bruker, 1997) | h = −13→12 |
Tmin = 0.976, Tmax = 0.980 | k = −14→13 |
9518 measured reflections | l = −15→15 |
Refinement on F2 | 0 restraints |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.056 | w = 1/[σ2(Fo2) + (0.0943P)2 + 0.4133P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.169 | (Δ/σ)max < 0.001 |
S = 1.01 | Δρmax = 0.55 e Å−3 |
5018 reflections | Δρmin = −0.34 e Å−3 |
383 parameters |
C35H36N4O3 | γ = 98.337 (2)° |
Mr = 560.68 | V = 1501.21 (8) Å3 |
Triclinic, P1 | Z = 2 |
a = 11.6453 (5) Å | Mo Kα radiation |
b = 11.8588 (3) Å | µ = 0.08 mm−1 |
c = 12.9822 (3) Å | T = 273 K |
α = 116.321 (1)° | 0.30 × 0.30 × 0.25 mm |
β = 103.173 (2)° |
Bruker APEXII CCD area-detector diffractometer | 5018 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 1997) | 3667 reflections with I > 2σ(I) |
Tmin = 0.976, Tmax = 0.980 | Rint = 0.020 |
9518 measured reflections |
R[F2 > 2σ(F2)] = 0.056 | 0 restraints |
wR(F2) = 0.169 | H-atom parameters constrained |
S = 1.01 | Δρmax = 0.55 e Å−3 |
5018 reflections | Δρmin = −0.34 e Å−3 |
383 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.61529 (16) | 0.99784 (14) | 0.12430 (14) | 0.0552 (4) | |
O2 | 0.52746 (17) | 1.55773 (17) | 0.38418 (16) | 0.0697 (5) | |
O3 | 0.10319 (17) | 1.2888 (2) | −0.06993 (17) | 0.0752 (6) | |
H3A | 0.1732 | 1.3180 | −0.0213 | 0.113* | |
N1 | 0.55473 (16) | 1.35526 (16) | 0.27576 (15) | 0.0430 (4) | |
N2 | 0.34153 (17) | 1.29474 (18) | −0.01746 (17) | 0.0496 (5) | |
N3 | 0.88189 (19) | 1.10924 (19) | −0.06256 (18) | 0.0571 (5) | |
H3B | 0.9285 | 1.1680 | −0.0682 | 0.068* | |
N4 | 0.35515 (18) | 0.83845 (18) | 0.29282 (19) | 0.0539 (5) | |
H4A | 0.3082 | 0.8541 | 0.3369 | 0.065* | |
C1 | 0.6847 (2) | 1.0985 (2) | 0.11824 (19) | 0.0440 (5) | |
C2 | 0.7442 (2) | 1.0584 (2) | 0.0336 (2) | 0.0477 (6) | |
H2B | 0.7345 | 0.9694 | −0.0143 | 0.057* | |
C3 | 0.8187 (2) | 1.1487 (2) | 0.0184 (2) | 0.0443 (5) | |
C4 | 0.82894 (19) | 1.2838 (2) | 0.0902 (2) | 0.0439 (5) | |
C5 | 0.7681 (2) | 1.3186 (2) | 0.1733 (2) | 0.0442 (5) | |
H5A | 0.7758 | 1.4072 | 0.2205 | 0.053* | |
C6 | 0.69504 (19) | 1.2290 (2) | 0.19164 (19) | 0.0413 (5) | |
C7 | 0.63690 (19) | 1.2743 (2) | 0.29058 (19) | 0.0407 (5) | |
C8 | 0.56535 (19) | 1.1577 (2) | 0.29171 (19) | 0.0413 (5) | |
C9 | 0.5015 (2) | 1.1743 (2) | 0.37370 (19) | 0.0448 (5) | |
H9A | 0.5057 | 1.2593 | 0.4294 | 0.054* | |
C10 | 0.4326 (2) | 1.0719 (2) | 0.3771 (2) | 0.0448 (5) | |
C11 | 0.4261 (2) | 0.9423 (2) | 0.2921 (2) | 0.0441 (5) | |
C12 | 0.4884 (2) | 0.9238 (2) | 0.2102 (2) | 0.0477 (6) | |
H12A | 0.4847 | 0.8392 | 0.1540 | 0.057* | |
C13 | 0.5566 (2) | 1.0302 (2) | 0.21049 (19) | 0.0432 (5) | |
C14 | 0.9068 (2) | 1.3854 (2) | 0.0759 (2) | 0.0593 (7) | |
H14A | 0.8967 | 1.4698 | 0.1244 | 0.089* | |
H14B | 0.8818 | 1.3633 | −0.0080 | 0.089* | |
H14C | 0.9916 | 1.3879 | 0.1023 | 0.089* | |
C15 | 0.8734 (3) | 0.9726 (2) | −0.1390 (2) | 0.0617 (7) | |
H15A | 0.7899 | 0.9267 | −0.1946 | 0.074* | |
H15B | 0.8922 | 0.9328 | −0.0884 | 0.074* | |
C16 | 0.9601 (3) | 0.9574 (3) | −0.2109 (3) | 0.0731 (8) | |
H16A | 0.9549 | 0.8663 | −0.2572 | 0.110* | |
H16B | 1.0426 | 1.0050 | −0.1563 | 0.110* | |
H16C | 0.9382 | 0.9914 | −0.2651 | 0.110* | |
C17 | 0.3645 (2) | 1.0961 (2) | 0.4661 (2) | 0.0599 (7) | |
H17A | 0.3775 | 1.1887 | 0.5149 | 0.090* | |
H17B | 0.3941 | 1.0612 | 0.5177 | 0.090* | |
H17C | 0.2783 | 1.0540 | 0.4229 | 0.090* | |
C18 | 0.3572 (2) | 0.7054 (2) | 0.2223 (2) | 0.0558 (6) | |
H18A | 0.4406 | 0.6995 | 0.2449 | 0.067* | |
H18B | 0.3307 | 0.6794 | 0.1366 | 0.067* | |
C19 | 0.2740 (3) | 0.6137 (3) | 0.2434 (3) | 0.0710 (8) | |
H19A | 0.2798 | 0.5262 | 0.1987 | 0.106* | |
H19B | 0.1907 | 0.6153 | 0.2162 | 0.106* | |
H19C | 0.2986 | 0.6411 | 0.3286 | 0.106* | |
C20 | 0.7308 (2) | 1.3743 (2) | 0.41426 (19) | 0.0440 (5) | |
C21 | 0.8369 (2) | 1.3621 (2) | 0.4758 (2) | 0.0566 (6) | |
H21A | 0.8599 | 1.2852 | 0.4427 | 0.068* | |
C22 | 0.9085 (3) | 1.4675 (3) | 0.5882 (3) | 0.0679 (8) | |
H22A | 0.9807 | 1.4613 | 0.6312 | 0.081* | |
C23 | 0.8745 (3) | 1.5813 (3) | 0.6375 (2) | 0.0728 (8) | |
H23A | 0.9235 | 1.6504 | 0.7138 | 0.087* | |
C24 | 0.7691 (3) | 1.5944 (2) | 0.5756 (2) | 0.0646 (7) | |
H24A | 0.7464 | 1.6715 | 0.6087 | 0.077* | |
C25 | 0.6977 (2) | 1.4891 (2) | 0.4624 (2) | 0.0492 (6) | |
C26 | 0.5851 (2) | 1.4766 (2) | 0.3749 (2) | 0.0497 (6) | |
C27 | 0.4445 (2) | 1.3027 (2) | 0.1728 (2) | 0.0482 (6) | |
H27A | 0.3760 | 1.3217 | 0.2018 | 0.058* | |
H27B | 0.4277 | 1.2082 | 0.1272 | 0.058* | |
C28 | 0.4528 (2) | 1.3576 (2) | 0.0890 (2) | 0.0518 (6) | |
H28A | 0.4637 | 1.4514 | 0.1323 | 0.062* | |
H28B | 0.5237 | 1.3433 | 0.0629 | 0.062* | |
C29 | 0.3371 (2) | 1.3596 (2) | −0.0916 (2) | 0.0552 (6) | |
H29A | 0.3996 | 1.4300 | −0.0749 | 0.066* | |
C30 | 0.2200 (2) | 1.2987 (2) | −0.1972 (2) | 0.0526 (6) | |
C31 | 0.2189 (3) | 1.2780 (3) | −0.3105 (3) | 0.0811 (9) | |
H31A | 0.2927 | 1.2992 | −0.3230 | 0.097* | |
C32 | 0.1091 (5) | 1.2257 (4) | −0.4065 (3) | 0.1077 (13) | |
H32A | 0.1095 | 1.2120 | −0.4827 | 0.129* | |
C33 | 0.0009 (4) | 1.1948 (4) | −0.3886 (4) | 0.1007 (12) | |
H33A | −0.0724 | 1.1579 | −0.4533 | 0.121* | |
C34 | −0.0008 (3) | 1.2176 (3) | −0.2758 (3) | 0.0790 (9) | |
H34A | −0.0752 | 1.1992 | −0.2633 | 0.095* | |
C35 | 0.1079 (2) | 1.2677 (2) | −0.1814 (2) | 0.0554 (6) |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0714 (11) | 0.0304 (8) | 0.0645 (10) | 0.0073 (7) | 0.0418 (9) | 0.0170 (7) |
O2 | 0.0791 (13) | 0.0448 (11) | 0.0760 (12) | 0.0301 (9) | 0.0223 (10) | 0.0201 (9) |
O3 | 0.0627 (12) | 0.0906 (14) | 0.0746 (12) | 0.0092 (10) | 0.0367 (10) | 0.0397 (11) |
N1 | 0.0433 (10) | 0.0308 (9) | 0.0472 (10) | 0.0084 (7) | 0.0125 (8) | 0.0147 (8) |
N2 | 0.0487 (11) | 0.0499 (11) | 0.0488 (10) | 0.0077 (8) | 0.0154 (9) | 0.0255 (9) |
N3 | 0.0664 (14) | 0.0418 (11) | 0.0643 (12) | 0.0082 (9) | 0.0374 (11) | 0.0220 (9) |
N4 | 0.0567 (12) | 0.0400 (11) | 0.0742 (13) | 0.0135 (9) | 0.0381 (11) | 0.0281 (10) |
C1 | 0.0464 (13) | 0.0336 (12) | 0.0499 (12) | 0.0046 (9) | 0.0183 (10) | 0.0197 (10) |
C2 | 0.0537 (14) | 0.0333 (12) | 0.0498 (12) | 0.0064 (10) | 0.0215 (11) | 0.0150 (10) |
C3 | 0.0421 (12) | 0.0404 (12) | 0.0481 (12) | 0.0070 (9) | 0.0154 (10) | 0.0212 (10) |
C4 | 0.0391 (12) | 0.0396 (12) | 0.0514 (12) | 0.0053 (9) | 0.0126 (10) | 0.0240 (10) |
C5 | 0.0444 (12) | 0.0312 (11) | 0.0534 (13) | 0.0080 (9) | 0.0160 (10) | 0.0189 (10) |
C6 | 0.0406 (12) | 0.0339 (12) | 0.0462 (12) | 0.0068 (9) | 0.0131 (10) | 0.0188 (9) |
C7 | 0.0417 (12) | 0.0310 (11) | 0.0478 (12) | 0.0101 (9) | 0.0164 (10) | 0.0174 (9) |
C8 | 0.0416 (12) | 0.0332 (12) | 0.0476 (12) | 0.0088 (9) | 0.0153 (10) | 0.0189 (9) |
C9 | 0.0490 (13) | 0.0335 (12) | 0.0476 (12) | 0.0126 (9) | 0.0182 (10) | 0.0151 (9) |
C10 | 0.0450 (13) | 0.0414 (13) | 0.0514 (12) | 0.0144 (9) | 0.0212 (10) | 0.0226 (10) |
C11 | 0.0429 (12) | 0.0383 (12) | 0.0551 (13) | 0.0113 (9) | 0.0207 (10) | 0.0242 (10) |
C12 | 0.0543 (14) | 0.0306 (12) | 0.0574 (13) | 0.0099 (9) | 0.0264 (11) | 0.0180 (10) |
C13 | 0.0467 (13) | 0.0343 (12) | 0.0500 (12) | 0.0108 (9) | 0.0225 (10) | 0.0190 (9) |
C14 | 0.0681 (17) | 0.0454 (14) | 0.0726 (16) | 0.0115 (12) | 0.0338 (14) | 0.0323 (12) |
C15 | 0.0718 (17) | 0.0482 (15) | 0.0566 (14) | 0.0065 (12) | 0.0287 (13) | 0.0185 (11) |
C16 | 0.090 (2) | 0.0556 (17) | 0.0761 (18) | 0.0213 (14) | 0.0462 (16) | 0.0256 (14) |
C17 | 0.0671 (17) | 0.0506 (15) | 0.0685 (16) | 0.0173 (12) | 0.0378 (14) | 0.0272 (12) |
C18 | 0.0567 (15) | 0.0409 (14) | 0.0734 (16) | 0.0100 (11) | 0.0284 (13) | 0.0289 (12) |
C19 | 0.0705 (18) | 0.0525 (16) | 0.103 (2) | 0.0137 (13) | 0.0413 (17) | 0.0444 (15) |
C20 | 0.0461 (13) | 0.0355 (12) | 0.0484 (12) | 0.0045 (9) | 0.0173 (10) | 0.0203 (10) |
C21 | 0.0550 (15) | 0.0514 (15) | 0.0626 (15) | 0.0112 (11) | 0.0156 (12) | 0.0305 (12) |
C22 | 0.0561 (16) | 0.0651 (19) | 0.0697 (17) | 0.0000 (13) | 0.0007 (13) | 0.0373 (15) |
C23 | 0.082 (2) | 0.0507 (17) | 0.0541 (15) | −0.0072 (14) | −0.0010 (15) | 0.0191 (13) |
C24 | 0.0790 (19) | 0.0370 (14) | 0.0550 (14) | 0.0029 (12) | 0.0096 (14) | 0.0141 (11) |
C25 | 0.0537 (14) | 0.0350 (12) | 0.0501 (13) | 0.0052 (10) | 0.0144 (11) | 0.0173 (10) |
C26 | 0.0579 (15) | 0.0345 (13) | 0.0537 (13) | 0.0133 (10) | 0.0216 (12) | 0.0179 (10) |
C27 | 0.0440 (13) | 0.0391 (12) | 0.0564 (13) | 0.0067 (9) | 0.0149 (11) | 0.0218 (10) |
C28 | 0.0499 (14) | 0.0466 (13) | 0.0555 (13) | 0.0077 (10) | 0.0193 (11) | 0.0234 (11) |
C29 | 0.0521 (14) | 0.0588 (15) | 0.0633 (15) | 0.0076 (11) | 0.0234 (12) | 0.0377 (12) |
C30 | 0.0605 (15) | 0.0501 (14) | 0.0597 (14) | 0.0229 (11) | 0.0288 (12) | 0.0310 (12) |
C31 | 0.096 (2) | 0.105 (3) | 0.0682 (19) | 0.0437 (19) | 0.0405 (18) | 0.0533 (18) |
C32 | 0.139 (4) | 0.131 (3) | 0.065 (2) | 0.055 (3) | 0.026 (2) | 0.057 (2) |
C33 | 0.099 (3) | 0.100 (3) | 0.095 (3) | 0.023 (2) | −0.004 (2) | 0.060 (2) |
C34 | 0.0605 (18) | 0.074 (2) | 0.105 (2) | 0.0163 (14) | 0.0102 (17) | 0.0549 (18) |
C35 | 0.0571 (16) | 0.0462 (14) | 0.0669 (16) | 0.0177 (11) | 0.0229 (13) | 0.0291 (12) |
O1—C13 | 1.382 (3) | C15—H15B | 0.97 |
O1—C1 | 1.384 (2) | C16—H16A | 0.96 |
O2—C26 | 1.229 (3) | C16—H16B | 0.96 |
O3—C35 | 1.371 (3) | C16—H16C | 0.96 |
O3—H3A | 0.82 | C17—H17A | 0.96 |
N1—C26 | 1.362 (3) | C17—H17B | 0.96 |
N1—C27 | 1.439 (3) | C17—H17C | 0.96 |
N1—C7 | 1.491 (3) | C18—C19 | 1.509 (3) |
N2—C28 | 1.461 (3) | C18—H18A | 0.97 |
N2—C29 | 1.472 (3) | C18—H18B | 0.97 |
N3—C3 | 1.372 (3) | C19—H19A | 0.96 |
N3—C15 | 1.450 (3) | C19—H19B | 0.96 |
N3—H3B | 0.86 | C19—H19C | 0.96 |
N4—C11 | 1.385 (3) | C20—C21 | 1.375 (3) |
N4—C18 | 1.438 (3) | C20—C25 | 1.379 (3) |
N4—H4A | 0.86 | C21—C22 | 1.383 (4) |
C1—C2 | 1.375 (3) | C21—H21A | 0.93 |
C1—C6 | 1.380 (3) | C22—C23 | 1.376 (4) |
C2—C3 | 1.390 (3) | C22—H22A | 0.93 |
C2—H2B | 0.93 | C23—C24 | 1.376 (4) |
C3—C4 | 1.421 (3) | C23—H23A | 0.93 |
C4—C5 | 1.369 (3) | C24—C25 | 1.387 (3) |
C4—C14 | 1.506 (3) | C24—H24A | 0.93 |
C5—C6 | 1.401 (3) | C25—C26 | 1.466 (3) |
C5—H5A | 0.93 | C27—C28 | 1.509 (3) |
C6—C7 | 1.512 (3) | C27—H27A | 0.97 |
C7—C8 | 1.514 (3) | C27—H27B | 0.97 |
C7—C20 | 1.522 (3) | C28—H28A | 0.97 |
C8—C13 | 1.379 (3) | C28—H28B | 0.97 |
C8—C9 | 1.393 (3) | C29—C30 | 1.498 (3) |
C9—C10 | 1.378 (3) | C29—H29A | 0.93 |
C9—H9A | 0.93 | C30—C31 | 1.376 (4) |
C10—C11 | 1.417 (3) | C30—C35 | 1.390 (3) |
C10—C17 | 1.496 (3) | C31—C32 | 1.390 (5) |
C11—C12 | 1.377 (3) | C31—H31A | 0.93 |
C12—C13 | 1.387 (3) | C32—C33 | 1.360 (5) |
C12—H12A | 0.93 | C32—H32A | 0.93 |
C14—H14A | 0.96 | C33—C34 | 1.372 (5) |
C14—H14B | 0.96 | C33—H33A | 0.93 |
C14—H14C | 0.96 | C34—C35 | 1.374 (4) |
C15—C16 | 1.501 (4) | C34—H34A | 0.93 |
C15—H15A | 0.97 | ||
C13—O1—C1 | 118.30 (16) | C10—C17—H17A | 109.5 |
C35—O3—H3A | 109.5 | C10—C17—H17B | 109.5 |
C26—N1—C27 | 123.37 (19) | H17A—C17—H17B | 109.5 |
C26—N1—C7 | 113.76 (17) | C10—C17—H17C | 109.5 |
C27—N1—C7 | 122.35 (16) | H17A—C17—H17C | 109.5 |
C28—N2—C29 | 112.26 (18) | H17B—C17—H17C | 109.5 |
C3—N3—C15 | 122.76 (19) | N4—C18—C19 | 110.8 (2) |
C3—N3—H3B | 118.6 | N4—C18—H18A | 109.5 |
C15—N3—H3B | 118.6 | C19—C18—H18A | 109.5 |
C11—N4—C18 | 122.31 (19) | N4—C18—H18B | 109.5 |
C11—N4—H4A | 118.8 | C19—C18—H18B | 109.5 |
C18—N4—H4A | 118.8 | H18A—C18—H18B | 108.1 |
C2—C1—C6 | 122.20 (19) | C18—C19—H19A | 109.5 |
C2—C1—O1 | 114.70 (18) | C18—C19—H19B | 109.5 |
C6—C1—O1 | 123.09 (19) | H19A—C19—H19B | 109.5 |
C1—C2—C3 | 121.2 (2) | C18—C19—H19C | 109.5 |
C1—C2—H2B | 119.4 | H19A—C19—H19C | 109.5 |
C3—C2—H2B | 119.4 | H19B—C19—H19C | 109.5 |
N3—C3—C2 | 121.2 (2) | C21—C20—C25 | 120.9 (2) |
N3—C3—C4 | 120.58 (19) | C21—C20—C7 | 128.6 (2) |
C2—C3—C4 | 118.2 (2) | C25—C20—C7 | 110.5 (2) |
C5—C4—C3 | 118.36 (19) | C20—C21—C22 | 118.2 (3) |
C5—C4—C14 | 121.3 (2) | C20—C21—H21A | 120.9 |
C3—C4—C14 | 120.3 (2) | C22—C21—H21A | 120.9 |
C4—C5—C6 | 124.1 (2) | C23—C22—C21 | 121.1 (3) |
C4—C5—H5A | 118.0 | C23—C22—H22A | 119.5 |
C6—C5—H5A | 118.0 | C21—C22—H22A | 119.5 |
C1—C6—C5 | 116.0 (2) | C22—C23—C24 | 120.9 (2) |
C1—C6—C7 | 122.45 (18) | C22—C23—H23A | 119.5 |
C5—C6—C7 | 121.51 (18) | C24—C23—H23A | 119.5 |
N1—C7—C6 | 111.72 (17) | C23—C24—C25 | 118.1 (3) |
N1—C7—C8 | 109.84 (17) | C23—C24—H24A | 121.0 |
C6—C7—C8 | 110.45 (17) | C25—C24—H24A | 121.0 |
N1—C7—C20 | 99.86 (16) | C20—C25—C24 | 120.8 (2) |
C6—C7—C20 | 111.95 (17) | C20—C25—C26 | 109.02 (19) |
C8—C7—C20 | 112.63 (17) | C24—C25—C26 | 130.1 (2) |
C13—C8—C9 | 116.30 (19) | O2—C26—N1 | 124.8 (2) |
C13—C8—C7 | 122.44 (19) | O2—C26—C25 | 128.6 (2) |
C9—C8—C7 | 121.24 (18) | N1—C26—C25 | 106.6 (2) |
C10—C9—C8 | 123.8 (2) | N1—C27—C28 | 113.04 (18) |
C10—C9—H9A | 118.1 | N1—C27—H27A | 109.0 |
C8—C9—H9A | 118.1 | C28—C27—H27A | 109.0 |
C9—C10—C11 | 118.1 (2) | N1—C27—H27B | 109.0 |
C9—C10—C17 | 121.2 (2) | C28—C27—H27B | 109.0 |
C11—C10—C17 | 120.7 (2) | H27A—C27—H27B | 107.8 |
C12—C11—N4 | 122.2 (2) | N2—C28—C27 | 110.51 (18) |
C12—C11—C10 | 119.00 (19) | N2—C28—H28A | 109.5 |
N4—C11—C10 | 118.74 (19) | C27—C28—H28A | 109.5 |
C11—C12—C13 | 120.7 (2) | N2—C28—H28B | 109.5 |
C11—C12—H12A | 119.7 | C27—C28—H28B | 109.5 |
C13—C12—H12A | 119.7 | H28A—C28—H28B | 108.1 |
C8—C13—O1 | 123.17 (18) | N2—C29—C30 | 111.97 (19) |
C8—C13—C12 | 122.1 (2) | N2—C29—H29A | 124.0 |
O1—C13—C12 | 114.72 (18) | C30—C29—H29A | 124.0 |
C4—C14—H14A | 109.5 | C31—C30—C35 | 117.9 (3) |
C4—C14—H14B | 109.5 | C31—C30—C29 | 121.6 (2) |
H14A—C14—H14B | 109.5 | C35—C30—C29 | 120.4 (2) |
C4—C14—H14C | 109.5 | C30—C31—C32 | 120.9 (3) |
H14A—C14—H14C | 109.5 | C30—C31—H31A | 119.5 |
H14B—C14—H14C | 109.5 | C32—C31—H31A | 119.5 |
N3—C15—C16 | 111.8 (2) | C33—C32—C31 | 119.8 (3) |
N3—C15—H15A | 109.2 | C33—C32—H32A | 120.1 |
C16—C15—H15A | 109.2 | C31—C32—H32A | 120.1 |
N3—C15—H15B | 109.2 | C32—C33—C34 | 120.5 (3) |
C16—C15—H15B | 109.2 | C32—C33—H33A | 119.8 |
H15A—C15—H15B | 107.9 | C34—C33—H33A | 119.8 |
C15—C16—H16A | 109.5 | C33—C34—C35 | 119.6 (3) |
C15—C16—H16B | 109.5 | C33—C34—H34A | 120.2 |
H16A—C16—H16B | 109.5 | C35—C34—H34A | 120.2 |
C15—C16—H16C | 109.5 | O3—C35—C34 | 118.3 (3) |
H16A—C16—H16C | 109.5 | O3—C35—C30 | 120.5 (2) |
H16B—C16—H16C | 109.5 | C34—C35—C30 | 121.2 (3) |
C13—O1—C1—C2 | 177.43 (19) | C9—C8—C13—C12 | −0.1 (3) |
C13—O1—C1—C6 | −2.0 (3) | C7—C8—C13—C12 | −178.4 (2) |
C6—C1—C2—C3 | 0.3 (4) | C1—O1—C13—C8 | −1.0 (3) |
O1—C1—C2—C3 | −179.1 (2) | C1—O1—C13—C12 | 179.64 (19) |
C15—N3—C3—C2 | 1.6 (4) | C11—C12—C13—C8 | 0.0 (4) |
C15—N3—C3—C4 | −179.2 (2) | C11—C12—C13—O1 | 179.4 (2) |
C1—C2—C3—N3 | 177.4 (2) | C3—N3—C15—C16 | −175.0 (2) |
C1—C2—C3—C4 | −1.9 (3) | C11—N4—C18—C19 | 178.4 (2) |
N3—C3—C4—C5 | −177.3 (2) | N1—C7—C20—C21 | −175.0 (2) |
C2—C3—C4—C5 | 1.9 (3) | C6—C7—C20—C21 | −56.6 (3) |
N3—C3—C4—C14 | 1.7 (3) | C8—C7—C20—C21 | 68.6 (3) |
C2—C3—C4—C14 | −179.1 (2) | N1—C7—C20—C25 | 4.0 (2) |
C3—C4—C5—C6 | −0.5 (3) | C6—C7—C20—C25 | 122.4 (2) |
C14—C4—C5—C6 | −179.5 (2) | C8—C7—C20—C25 | −112.4 (2) |
C2—C1—C6—C5 | 1.1 (3) | C25—C20—C21—C22 | 1.1 (3) |
O1—C1—C6—C5 | −179.5 (2) | C7—C20—C21—C22 | 180.0 (2) |
C2—C1—C6—C7 | −175.8 (2) | C20—C21—C22—C23 | 0.2 (4) |
O1—C1—C6—C7 | 3.6 (3) | C21—C22—C23—C24 | −1.0 (4) |
C4—C5—C6—C1 | −1.0 (3) | C22—C23—C24—C25 | 0.4 (4) |
C4—C5—C6—C7 | 175.9 (2) | C21—C20—C25—C24 | −1.6 (3) |
C26—N1—C7—C6 | −123.32 (19) | C7—C20—C25—C24 | 179.3 (2) |
C27—N1—C7—C6 | 64.6 (2) | C21—C20—C25—C26 | 176.9 (2) |
C26—N1—C7—C8 | 113.8 (2) | C7—C20—C25—C26 | −2.2 (3) |
C27—N1—C7—C8 | −58.3 (2) | C23—C24—C25—C20 | 0.8 (4) |
C26—N1—C7—C20 | −4.8 (2) | C23—C24—C25—C26 | −177.4 (2) |
C27—N1—C7—C20 | −176.83 (18) | C27—N1—C26—O2 | −5.4 (4) |
C1—C6—C7—N1 | −124.7 (2) | C7—N1—C26—O2 | −177.4 (2) |
C5—C6—C7—N1 | 58.6 (3) | C27—N1—C26—C25 | 175.75 (19) |
C1—C6—C7—C8 | −2.1 (3) | C7—N1—C26—C25 | 3.8 (2) |
C5—C6—C7—C8 | −178.85 (18) | C20—C25—C26—O2 | −179.7 (2) |
C1—C6—C7—C20 | 124.3 (2) | C24—C25—C26—O2 | −1.4 (4) |
C5—C6—C7—C20 | −52.5 (3) | C20—C25—C26—N1 | −0.9 (3) |
N1—C7—C8—C13 | 123.0 (2) | C24—C25—C26—N1 | 177.4 (2) |
C6—C7—C8—C13 | −0.7 (3) | C26—N1—C27—C28 | 77.5 (3) |
C20—C7—C8—C13 | −126.7 (2) | C7—N1—C27—C28 | −111.2 (2) |
N1—C7—C8—C9 | −55.2 (3) | C29—N2—C28—C27 | 170.9 (2) |
C6—C7—C8—C9 | −178.86 (19) | N1—C27—C28—N2 | 176.43 (18) |
C20—C7—C8—C9 | 55.1 (3) | C28—N2—C29—C30 | −177.25 (19) |
C13—C8—C9—C10 | 0.1 (3) | N2—C29—C30—C31 | −139.0 (3) |
C7—C8—C9—C10 | 178.4 (2) | N2—C29—C30—C35 | 44.5 (3) |
C8—C9—C10—C11 | −0.1 (3) | C35—C30—C31—C32 | −1.0 (4) |
C8—C9—C10—C17 | −179.0 (2) | C29—C30—C31—C32 | −177.6 (3) |
C18—N4—C11—C12 | 10.5 (4) | C30—C31—C32—C33 | 0.2 (6) |
C18—N4—C11—C10 | −170.9 (2) | C31—C32—C33—C34 | 1.5 (6) |
C9—C10—C11—C12 | 0.0 (3) | C32—C33—C34—C35 | −2.3 (5) |
C17—C10—C11—C12 | 178.9 (2) | C33—C34—C35—O3 | −179.7 (3) |
C9—C10—C11—N4 | −178.7 (2) | C33—C34—C35—C30 | 1.4 (4) |
C17—C10—C11—N4 | 0.2 (3) | C31—C30—C35—O3 | −178.7 (2) |
N4—C11—C12—C13 | 178.7 (2) | C29—C30—C35—O3 | −2.0 (4) |
C10—C11—C12—C13 | 0.1 (3) | C31—C30—C35—C34 | 0.2 (4) |
C9—C8—C13—O1 | −179.5 (2) | C29—C30—C35—C34 | 176.9 (2) |
C7—C8—C13—O1 | 2.3 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3A···N2 | 0.82 | 2.01 | 2.685 (3) | 139 |
N3—H3B···O3i | 0.86 | 2.32 | 3.144 (1) | 160 |
C9—H9A···O2ii | 0.93 | 2.59 | 3.468 (3) | 157 |
Symmetry codes: (i) x+1, y, z; (ii) −x+1, −y+3, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C35H36N4O3 |
Mr | 560.68 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 273 |
a, b, c (Å) | 11.6453 (5), 11.8588 (3), 12.9822 (3) |
α, β, γ (°) | 116.321 (1), 103.173 (2), 98.337 (2) |
V (Å3) | 1501.21 (8) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.08 |
Crystal size (mm) | 0.30 × 0.30 × 0.25 |
Data collection | |
Diffractometer | Bruker APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 1997) |
Tmin, Tmax | 0.976, 0.980 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9518, 5018, 3667 |
Rint | 0.020 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.056, 0.169, 1.01 |
No. of reflections | 5018 |
No. of parameters | 383 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.55, −0.34 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2001), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXTL (Bruker, 1997).
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3A···N2 | 0.82 | 2.01 | 2.685 (3) | 139 |
N3—H3B···O3i | 0.86 | 2.32 | 3.144 (1) | 160 |
C9—H9A···O2ii | 0.93 | 2.59 | 3.468 (3) | 157 |
Symmetry codes: (i) x+1, y, z; (ii) −x+1, −y+3, −z+1. |
Acknowledgements
This work was supported by the National Natural Science Foundation of China (grant Nos. 20376010 and 20472012) and the Natural Science Foundation of Liaoning Provence (grant No. 20062186).
References
Bruker (1997). SADABS (Version 2.03) and SHELXTL (Version 5.10). Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Bruker (2001). SAINT-Plus. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Bruker (2005). APEX2. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
De Silva, A. P., Gunaratne, H. Q. N., Gunnlaugsson, T., Huxley, A. J. M., McCoy, C. P., Rademacher, J. T. & Rice, T. E. (1997). Chem. Rev. 97, 1515–1566. CrossRef PubMed CAS Web of Science Google Scholar
Kwon, J. Y., Jang, Y. J., Lee, Y. J., Kim, K. M., Seo, M. S., Nam, W. & Yoon, J. (2005). J. Am. Chem. Soc. 127, 10107–10111. Web of Science CSD CrossRef PubMed CAS Google Scholar
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Rhodamine dyes are widely used in fluorescent labels and other present biological techniques (De Silva et al., 1997). There are a few single-crystal reports about the rhodamine derivatives bearing the lactam moiety (Kwon et al., 2005; Wu et al.,2007). Detailed information on their molecular and crystal structures is necessary to understand their photophysical and photochemical properties. As part of our own work on rhodamine dyes, the title compound (Fig. 1) was prepared by the reaction of N-(rhodamine-6 G) lactam-ethylenediamine with 2-hydroxybenzaldehyde.
In agreement with other reported models, the main skeleton of the molecule is formed from the xanthene ring and the spirolactam-ring (Kwon et al., 2005; Wu et al., 2007). The atoms of the xanthene ring or the spirolactam-ring are almost coplanar. The planes formed have r.m.s. deviations from the mean plane of only 0.0248 Å for the xanthene ring and 0.0231 Å for the spirolactam-ring, respectively. The dihedral angle between the planes of the xanthene ring and the spirolactam-ring fragment is 85.7°. The phenol part of the molecule (C30 benzene ring plus O3) is close to being planar, with an r.m.s. deviation for the fitted atoms of 0.0065 Å. The dihedral angle with the planes of the xanthene ring and the spirolactam-ring fragment is 109.4° and 107.8° respectively. Each of the molecules in the crystal structure contains one O—H···N intramolecular hydrogen bond, and they form infinite intermolecular N—H···O hydrogen bonded chains along [1 0 0]. Weak intermolecular C—H···O hydrogen bonding contacts connect the infinite chains via crystallographic inversion centres to form a two-dimensional network (Table 1).