organic compounds
Bis(piperazinediium) benzene-1,2,4,5-tetracarboxylate hexahydrate
aFaculty of Chemistry, Tarbiat Moallem University, 49 Mofateh Ave., Tehran, Iran, and bDepartment of Chemistry, Faculty of Science, University of Kurdistan, Sanandaj, Iran
*Correspondence e-mail: haghabozorg@yahoo.com
The title compound, 2C4H12N22+·C10H2O84−·6H2O or (pipzH2)2(btc)·6H2O, was formed from the reaction between benzene-1,2,4,5-tetracarboxylic acid (btcH4) as a proton donor and piperazine (pipz) as a proton acceptor. A variety of O—H⋯O, N—H⋯O and C—H⋯O hydrogen bonds, as well as C—H⋯π interactions, are present in the Two water O atoms are each disordered over two positions; for both the site occupany factors are ca 0.66 and 0.34.
Related literature
For related literature, see: Aghabozorg et al. (2006, 2007); Arora & Pedireddi (2003); Biradha & Zaworotko (1998).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2005); cell SAINT (Bruker, 2005); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536808007332/bt2674sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808007332/bt2674Isup2.hkl
For synthesizing the title compoud, a solution of 2540 mg (10 mmol) benzene-1,2,4,5-tetracarboxylic acid in 10 ml tetrahydrofuran and another solution of 860 mg (10 mmol) of piperazine in 10 ml of the same solvent were prepared and mixed. By heating, a white precipitate was obtained. The colorless prisms of the compound were obtained by recrystallization from water solution.
The hydrogen atoms of NH2 groups and water molecules (with exception of disordered ones) were found in difference Fourier synthesis. The positions of the H atoms bonded to C were calculated. All hydrogen atoms were refined in isotropic approximation in riding model with with the Uiso(H) parameters equal to 1.2 Ueq(C), 1.2 Ueq(N) and 1.2 Ueq(O) where U(C), U(N), U(O) are respectively the equivalent thermal parameters of the carbon, nitrogen and oxygen atoms to which corresponding H atoms are bonded.
Two water molecules are disordered over two positions with site occupation factor ratios of 0.663 (9)/0.337 (9) and 0.666 (6)/0.334 (6). It was impossible to locate hydrogen atoms on disordered water molecules.
There are two residual electron density peaks of 2.20 and 1.84 e Å-3 at 1.05 and 0.78%A near O6SB and O6SA atoms, respectively. It was impossible to refine these peaks as disordered water molecules.
Data collection: APEX2 (Bruker, 2005); cell
SAINT (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. Molecular structure of the ion pair (C4H12N2)24+(C10H2O8)4-.6H2O. Displacement ellipsoids are drawn at 50% probability level. | |
Fig. 2. Unit cell packing of the title compound, hydrogen bonds are shown as dashed lines and disordered atoms are omitted. | |
Fig. 3. The C—H···π interaction between C4—H4B and benzene ring, distance from the H atom to the ring centroid is drawn as a dashed line. | |
Fig. 4. Crystal packing of the title compound, Anions, cations and water molecules are shown in different colours. |
2C4H12N22+·C10H2O84−·6H2O | Z = 2 |
Mr = 534.52 | F(000) = 572 |
Triclinic, P1 | Dx = 1.389 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 6.7420 (4) Å | Cell parameters from 614 reflections |
b = 12.4636 (7) Å | θ = 3–29° |
c = 16.0100 (9) Å | µ = 0.12 mm−1 |
α = 99.092 (1)° | T = 100 K |
β = 90.347 (1)° | Prism, colorless |
γ = 105.528 (1)° | 0.23 × 0.21 × 0.17 mm |
V = 1278.27 (13) Å3 |
Bruker APEXII CCD area-detector diffractometer | 5839 independent reflections |
Radiation source: fine-focus sealed tube | 4805 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.027 |
ω scans | θmax = 27.5°, θmin = 3.1° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −8→8 |
Tmin = 0.970, Tmax = 0.982 | k = −16→16 |
13995 measured reflections | l = −20→20 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.059 | Hydrogen site location: mixed |
wR(F2) = 0.159 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.07P)2 + 2P] where P = (Fo2 + 2Fc2)/3 |
5839 reflections | (Δ/σ)max < 0.001 |
323 parameters | Δρmax = 2.20 e Å−3 |
0 restraints | Δρmin = −0.60 e Å−3 |
2C4H12N22+·C10H2O84−·6H2O | γ = 105.528 (1)° |
Mr = 534.52 | V = 1278.27 (13) Å3 |
Triclinic, P1 | Z = 2 |
a = 6.7420 (4) Å | Mo Kα radiation |
b = 12.4636 (7) Å | µ = 0.12 mm−1 |
c = 16.0100 (9) Å | T = 100 K |
α = 99.092 (1)° | 0.23 × 0.21 × 0.17 mm |
β = 90.347 (1)° |
Bruker APEXII CCD area-detector diffractometer | 5839 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 4805 reflections with I > 2σ(I) |
Tmin = 0.970, Tmax = 0.982 | Rint = 0.027 |
13995 measured reflections |
R[F2 > 2σ(F2)] = 0.059 | 0 restraints |
wR(F2) = 0.159 | H-atom parameters constrained |
S = 1.02 | Δρmax = 2.20 e Å−3 |
5839 reflections | Δρmin = −0.60 e Å−3 |
323 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
N1 | −0.1642 (3) | 0.13752 (14) | 0.70314 (11) | 0.0148 (4) | |
H1C | −0.2812 | 0.1173 | 0.6680 | 0.018* | |
H1D | −0.1227 | 0.0735 | 0.7058 | 0.018* | |
N2 | 0.1462 (3) | 0.30353 (14) | 0.81088 (11) | 0.0141 (3) | |
H2C | 0.1056 | 0.3677 | 0.8077 | 0.017* | |
H2D | 0.2632 | 0.3239 | 0.8460 | 0.017* | |
C1 | −0.2126 (3) | 0.18509 (18) | 0.78933 (14) | 0.0179 (4) | |
H1A | −0.3195 | 0.1274 | 0.8122 | 0.022* | |
H1B | −0.2674 | 0.2506 | 0.7862 | 0.022* | |
C2 | −0.0202 (3) | 0.22196 (18) | 0.84771 (13) | 0.0163 (4) | |
H2A | −0.0515 | 0.2580 | 0.9039 | 0.020* | |
H2B | 0.0267 | 0.1552 | 0.8555 | 0.020* | |
C3 | 0.1944 (3) | 0.25478 (18) | 0.72488 (13) | 0.0158 (4) | |
H3A | 0.2459 | 0.1882 | 0.7282 | 0.019* | |
H3B | 0.3032 | 0.3114 | 0.7018 | 0.019* | |
C4 | 0.0012 (3) | 0.22030 (17) | 0.66729 (13) | 0.0150 (4) | |
H4A | −0.0454 | 0.2877 | 0.6615 | 0.018* | |
H4B | 0.0312 | 0.1860 | 0.6103 | 0.018* | |
N3 | 0.3335 (3) | 0.76396 (16) | 0.71554 (12) | 0.0178 (4) | |
H3C | 0.2266 | 0.7216 | 0.7419 | 0.021* | |
H3D | 0.2885 | 0.8194 | 0.6960 | 0.021* | |
N4 | 0.6573 (3) | 0.65653 (16) | 0.73462 (11) | 0.0171 (4) | |
H4C | 0.7631 | 0.6995 | 0.7082 | 0.021* | |
H4D | 0.7039 | 0.6016 | 0.7541 | 0.021* | |
C5 | 0.5109 (3) | 0.81764 (19) | 0.77813 (14) | 0.0194 (4) | |
H5A | 0.4648 | 0.8619 | 0.8274 | 0.023* | |
H5B | 0.6199 | 0.8701 | 0.7517 | 0.023* | |
C6 | 0.5976 (3) | 0.7297 (2) | 0.80781 (14) | 0.0201 (4) | |
H6A | 0.7200 | 0.7675 | 0.8465 | 0.024* | |
H6B | 0.4933 | 0.6823 | 0.8396 | 0.024* | |
C7 | 0.4797 (3) | 0.60208 (18) | 0.67239 (14) | 0.0185 (4) | |
H7A | 0.3712 | 0.5496 | 0.6991 | 0.022* | |
H7B | 0.5257 | 0.5577 | 0.6232 | 0.022* | |
C8 | 0.3916 (3) | 0.69016 (19) | 0.64249 (14) | 0.0185 (4) | |
H8A | 0.4950 | 0.7371 | 0.6101 | 0.022* | |
H8B | 0.2684 | 0.6521 | 0.6043 | 0.022* | |
O1 | 1.0470 (2) | 0.48871 (13) | 0.77274 (9) | 0.0169 (3) | |
O2 | 1.0471 (2) | 0.66537 (12) | 0.82508 (9) | 0.0148 (3) | |
O3 | 0.6122 (2) | 0.48861 (14) | 0.83124 (10) | 0.0204 (3) | |
O4 | 0.4782 (2) | 0.36214 (14) | 0.91348 (10) | 0.0233 (4) | |
C9 | 1.1854 (3) | 0.55782 (16) | 0.97230 (12) | 0.0115 (4) | |
H9A | 1.3129 | 0.5973 | 0.9530 | 0.014* | |
C10 | 1.0075 (3) | 0.53211 (15) | 0.91992 (12) | 0.0100 (4) | |
C11 | 0.8194 (3) | 0.47309 (16) | 0.94750 (12) | 0.0109 (4) | |
C12 | 1.0312 (3) | 0.56437 (16) | 0.83241 (12) | 0.0113 (4) | |
C13 | 0.6225 (3) | 0.44016 (17) | 0.89245 (12) | 0.0131 (4) | |
O5 | 0.5182 (2) | 1.11219 (12) | 0.59735 (10) | 0.0182 (3) | |
O6 | 0.3881 (2) | 0.94917 (13) | 0.64244 (10) | 0.0197 (3) | |
O7 | −0.0392 (2) | 0.94673 (12) | 0.71610 (9) | 0.0152 (3) | |
O8 | −0.0657 (2) | 0.77912 (12) | 0.63610 (9) | 0.0145 (3) | |
C14 | 0.1873 (3) | 1.06607 (16) | 0.47969 (12) | 0.0108 (4) | |
H14A | 0.3161 | 1.1113 | 0.4657 | 0.013* | |
C15 | 0.1797 (3) | 1.00875 (16) | 0.54829 (12) | 0.0105 (4) | |
C16 | −0.0101 (3) | 0.94157 (16) | 0.56864 (12) | 0.0104 (4) | |
C17 | 0.3760 (3) | 1.02308 (17) | 0.60026 (12) | 0.0121 (4) | |
C18 | −0.0362 (3) | 0.88465 (17) | 0.64644 (12) | 0.0116 (4) | |
O1S | 0.8540 (4) | 0.15919 (16) | 0.03938 (14) | 0.0422 (5) | |
H1SA | 0.7441 | 0.1645 | 0.0207 | 0.051* | |
H1SB | 0.8898 | 0.2148 | 0.0766 | 0.051* | |
O2S | 0.2052 (3) | 0.36605 (15) | 0.52006 (11) | 0.0276 (4) | |
H2SA | 0.1274 | 0.4049 | 0.5358 | 0.033* | |
H2SB | 0.1364 | 0.3266 | 0.4783 | 0.033* | |
O3S | 0.5686 (3) | 0.33661 (14) | 0.57282 (12) | 0.0276 (4) | |
H3SA | 0.4566 | 0.3418 | 0.5565 | 0.033* | |
H3SB | 0.5433 | 0.2694 | 0.5763 | 0.033* | |
O4S | 0.9503 (3) | 0.49208 (14) | 0.60483 (10) | 0.0234 (4) | |
H4SA | 0.9722 | 0.4923 | 0.6553 | 0.028* | |
H4SB | 0.8329 | 0.4518 | 0.5922 | 0.028* | |
O5SA | 0.4646 (6) | 0.1816 (3) | −0.0094 (3) | 0.0453 (12)* | 0.663 (9) |
O6SA | 0.2705 (5) | 1.0084 (3) | 0.8494 (2) | 0.0431 (10)* | 0.666 (6) |
O5SB | 0.5326 (8) | 0.1596 (4) | −0.0451 (4) | 0.0246 (18)* | 0.337 (9) |
O6SB | 0.8058 (10) | 0.9423 (5) | 0.9689 (4) | 0.0419 (19)* | 0.334 (6) |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0127 (8) | 0.0119 (8) | 0.0179 (9) | 0.0019 (6) | −0.0054 (6) | 0.0000 (6) |
N2 | 0.0115 (8) | 0.0146 (8) | 0.0145 (8) | 0.0011 (6) | −0.0032 (6) | 0.0012 (6) |
C1 | 0.0127 (9) | 0.0178 (10) | 0.0215 (10) | 0.0020 (8) | 0.0012 (8) | 0.0017 (8) |
C2 | 0.0164 (10) | 0.0172 (10) | 0.0144 (9) | 0.0025 (8) | −0.0003 (8) | 0.0038 (8) |
C3 | 0.0131 (9) | 0.0173 (10) | 0.0163 (10) | 0.0030 (8) | 0.0007 (7) | 0.0023 (8) |
C4 | 0.0180 (10) | 0.0130 (9) | 0.0135 (9) | 0.0035 (8) | −0.0020 (7) | 0.0019 (7) |
N3 | 0.0121 (8) | 0.0212 (9) | 0.0236 (9) | 0.0048 (7) | 0.0015 (7) | 0.0137 (7) |
N4 | 0.0123 (8) | 0.0236 (9) | 0.0200 (9) | 0.0068 (7) | 0.0031 (7) | 0.0133 (7) |
C5 | 0.0163 (10) | 0.0213 (11) | 0.0205 (10) | 0.0024 (8) | 0.0016 (8) | 0.0082 (8) |
C6 | 0.0148 (10) | 0.0303 (12) | 0.0172 (10) | 0.0063 (9) | −0.0003 (8) | 0.0094 (9) |
C7 | 0.0141 (10) | 0.0201 (10) | 0.0224 (11) | 0.0034 (8) | 0.0007 (8) | 0.0088 (8) |
C8 | 0.0143 (10) | 0.0240 (11) | 0.0184 (10) | 0.0032 (8) | −0.0008 (8) | 0.0103 (8) |
O1 | 0.0226 (8) | 0.0186 (7) | 0.0100 (7) | 0.0064 (6) | −0.0002 (6) | 0.0027 (5) |
O2 | 0.0152 (7) | 0.0153 (7) | 0.0152 (7) | 0.0032 (5) | 0.0020 (5) | 0.0080 (5) |
O3 | 0.0152 (7) | 0.0261 (8) | 0.0202 (8) | 0.0006 (6) | −0.0046 (6) | 0.0138 (6) |
O4 | 0.0137 (7) | 0.0287 (9) | 0.0237 (8) | −0.0066 (6) | −0.0078 (6) | 0.0154 (7) |
C9 | 0.0104 (9) | 0.0118 (9) | 0.0125 (9) | 0.0025 (7) | 0.0007 (7) | 0.0037 (7) |
C10 | 0.0117 (9) | 0.0095 (8) | 0.0095 (8) | 0.0032 (7) | 0.0007 (7) | 0.0031 (7) |
C11 | 0.0110 (9) | 0.0102 (8) | 0.0117 (9) | 0.0025 (7) | −0.0009 (7) | 0.0027 (7) |
C12 | 0.0064 (8) | 0.0153 (9) | 0.0117 (9) | 0.0010 (7) | −0.0013 (7) | 0.0042 (7) |
C13 | 0.0109 (9) | 0.0155 (9) | 0.0127 (9) | 0.0026 (7) | −0.0007 (7) | 0.0038 (7) |
O5 | 0.0132 (7) | 0.0163 (7) | 0.0238 (8) | −0.0008 (6) | −0.0068 (6) | 0.0082 (6) |
O6 | 0.0133 (7) | 0.0232 (8) | 0.0260 (8) | 0.0039 (6) | −0.0004 (6) | 0.0162 (6) |
O7 | 0.0181 (7) | 0.0159 (7) | 0.0118 (7) | 0.0040 (6) | 0.0007 (5) | 0.0042 (5) |
O8 | 0.0153 (7) | 0.0127 (7) | 0.0169 (7) | 0.0040 (5) | 0.0023 (5) | 0.0066 (5) |
C14 | 0.0093 (8) | 0.0107 (8) | 0.0126 (9) | 0.0022 (7) | 0.0010 (7) | 0.0034 (7) |
C15 | 0.0092 (9) | 0.0105 (8) | 0.0121 (9) | 0.0028 (7) | −0.0002 (7) | 0.0023 (7) |
C16 | 0.0129 (9) | 0.0095 (8) | 0.0098 (8) | 0.0041 (7) | 0.0009 (7) | 0.0023 (7) |
C17 | 0.0109 (9) | 0.0157 (9) | 0.0107 (9) | 0.0049 (7) | 0.0010 (7) | 0.0033 (7) |
C18 | 0.0066 (8) | 0.0154 (9) | 0.0142 (9) | 0.0027 (7) | 0.0003 (7) | 0.0073 (7) |
O1S | 0.0552 (13) | 0.0269 (10) | 0.0427 (12) | 0.0156 (9) | 0.0075 (10) | −0.0071 (8) |
O2S | 0.0277 (9) | 0.0299 (9) | 0.0262 (9) | 0.0132 (7) | −0.0097 (7) | −0.0012 (7) |
O3S | 0.0208 (8) | 0.0188 (8) | 0.0422 (10) | 0.0022 (6) | −0.0072 (7) | 0.0076 (7) |
O4S | 0.0250 (8) | 0.0263 (8) | 0.0159 (7) | −0.0003 (7) | −0.0050 (6) | 0.0069 (6) |
N1—C1 | 1.488 (3) | C7—H7B | 0.9900 |
N1—C4 | 1.489 (3) | C8—H8A | 0.9900 |
N1—H1C | 0.9200 | C8—H8B | 0.9900 |
N1—H1D | 0.9200 | O1—C12 | 1.258 (2) |
N2—C3 | 1.489 (3) | O2—C12 | 1.259 (2) |
N2—C2 | 1.492 (3) | O3—C13 | 1.241 (2) |
N2—H2C | 0.9200 | O4—C13 | 1.268 (2) |
N2—H2D | 0.9200 | C9—C10 | 1.393 (3) |
C1—C2 | 1.516 (3) | C9—C11i | 1.396 (3) |
C1—H1A | 0.9900 | C9—H9A | 0.9500 |
C1—H1B | 0.9900 | C10—C11 | 1.398 (3) |
C2—H2A | 0.9900 | C10—C12 | 1.515 (3) |
C2—H2B | 0.9900 | C11—C9i | 1.396 (3) |
C3—C4 | 1.514 (3) | C11—C13 | 1.512 (3) |
C3—H3A | 0.9900 | O5—C17 | 1.266 (2) |
C3—H3B | 0.9900 | O6—C17 | 1.244 (2) |
C4—H4A | 0.9900 | O7—C18 | 1.256 (2) |
C4—H4B | 0.9900 | O8—C18 | 1.260 (2) |
N3—C8 | 1.492 (3) | C14—C16ii | 1.392 (3) |
N3—C5 | 1.493 (3) | C14—C15 | 1.396 (3) |
N3—H3C | 0.9200 | C14—H14A | 0.9500 |
N3—H3D | 0.9200 | C15—C16 | 1.401 (3) |
N4—C7 | 1.491 (3) | C15—C17 | 1.513 (3) |
N4—C6 | 1.494 (3) | C16—C14ii | 1.392 (3) |
N4—H4C | 0.9200 | C16—C18 | 1.517 (3) |
N4—H4D | 0.9200 | O1S—H1SA | 0.8201 |
C5—C6 | 1.508 (3) | O1S—H1SB | 0.8200 |
C5—H5A | 0.9900 | O2S—H2SA | 0.8197 |
C5—H5B | 0.9900 | O2S—H2SB | 0.8206 |
C6—H6A | 0.9900 | O3S—H3SA | 0.8199 |
C6—H6B | 0.9900 | O3S—H3SB | 0.8201 |
C7—C8 | 1.516 (3) | O4S—H4SA | 0.8201 |
C7—H7A | 0.9900 | O4S—H4SB | 0.8201 |
C1—N1—C4 | 111.54 (15) | H5A—C5—H5B | 108.0 |
C1—N1—H1C | 109.3 | N4—C6—C5 | 111.00 (17) |
C4—N1—H1C | 109.3 | N4—C6—H6A | 109.4 |
C1—N1—H1D | 109.3 | C5—C6—H6A | 109.4 |
C4—N1—H1D | 109.3 | N4—C6—H6B | 109.4 |
H1C—N1—H1D | 108.0 | C5—C6—H6B | 109.4 |
C3—N2—C2 | 111.88 (16) | H6A—C6—H6B | 108.0 |
C3—N2—H2C | 109.2 | N4—C7—C8 | 110.76 (18) |
C2—N2—H2C | 109.2 | N4—C7—H7A | 109.5 |
C3—N2—H2D | 109.2 | C8—C7—H7A | 109.5 |
C2—N2—H2D | 109.2 | N4—C7—H7B | 109.5 |
H2C—N2—H2D | 107.9 | C8—C7—H7B | 109.5 |
N1—C1—C2 | 110.14 (17) | H7A—C7—H7B | 108.1 |
N1—C1—H1A | 109.6 | N3—C8—C7 | 111.08 (17) |
C2—C1—H1A | 109.6 | N3—C8—H8A | 109.4 |
N1—C1—H1B | 109.6 | C7—C8—H8A | 109.4 |
C2—C1—H1B | 109.6 | N3—C8—H8B | 109.4 |
H1A—C1—H1B | 108.1 | C7—C8—H8B | 109.4 |
N2—C2—C1 | 109.93 (16) | H8A—C8—H8B | 108.0 |
N2—C2—H2A | 109.7 | C10—C9—C11i | 121.56 (18) |
C1—C2—H2A | 109.7 | C10—C9—H9A | 119.2 |
N2—C2—H2B | 109.7 | C11i—C9—H9A | 119.2 |
C1—C2—H2B | 109.7 | C9—C10—C11 | 119.63 (17) |
H2A—C2—H2B | 108.2 | C9—C10—C12 | 117.35 (17) |
N2—C3—C4 | 109.19 (16) | C11—C10—C12 | 122.92 (17) |
N2—C3—H3A | 109.8 | C9i—C11—C10 | 118.81 (17) |
C4—C3—H3A | 109.8 | C9i—C11—C13 | 119.25 (17) |
N2—C3—H3B | 109.8 | C10—C11—C13 | 121.93 (17) |
C4—C3—H3B | 109.8 | O1—C12—O2 | 124.58 (18) |
H3A—C3—H3B | 108.3 | O1—C12—C10 | 116.78 (17) |
N1—C4—C3 | 109.85 (16) | O2—C12—C10 | 118.47 (17) |
N1—C4—H4A | 109.7 | O3—C13—O4 | 124.84 (18) |
C3—C4—H4A | 109.7 | O3—C13—C11 | 119.64 (17) |
N1—C4—H4B | 109.7 | O4—C13—C11 | 115.51 (17) |
C3—C4—H4B | 109.7 | C16ii—C14—C15 | 121.44 (17) |
H4A—C4—H4B | 108.2 | C16ii—C14—H14A | 119.3 |
C8—N3—C5 | 111.59 (16) | C15—C14—H14A | 119.3 |
C8—N3—H3C | 109.3 | C14—C15—C16 | 119.25 (17) |
C5—N3—H3C | 109.3 | C14—C15—C17 | 119.16 (17) |
C8—N3—H3D | 109.3 | C16—C15—C17 | 121.57 (17) |
C5—N3—H3D | 109.3 | C14ii—C16—C15 | 119.31 (17) |
H3C—N3—H3D | 108.0 | C14ii—C16—C18 | 117.57 (17) |
C7—N4—C6 | 111.34 (16) | C15—C16—C18 | 122.87 (17) |
C7—N4—H4C | 109.4 | O6—C17—O5 | 124.55 (18) |
C6—N4—H4C | 109.4 | O6—C17—C15 | 119.42 (17) |
C7—N4—H4D | 109.4 | O5—C17—C15 | 116.03 (16) |
C6—N4—H4D | 109.4 | O7—C18—O8 | 125.13 (18) |
H4C—N4—H4D | 108.0 | O7—C18—C16 | 116.50 (17) |
N3—C5—C6 | 110.95 (18) | O8—C18—C16 | 118.21 (17) |
N3—C5—H5A | 109.4 | H1SA—O1S—H1SB | 102.8 |
C6—C5—H5A | 109.4 | H2SA—O2S—H2SB | 98.8 |
N3—C5—H5B | 109.4 | H3SA—O3S—H3SB | 102.2 |
C6—C5—H5B | 109.4 | H4SA—O4S—H4SB | 106.6 |
C4—N1—C1—C2 | −57.4 (2) | C9—C10—C12—O2 | −79.7 (2) |
C3—N2—C2—C1 | −57.4 (2) | C11—C10—C12—O2 | 103.9 (2) |
N1—C1—C2—N2 | 55.7 (2) | C9i—C11—C13—O3 | 162.78 (19) |
C2—N2—C3—C4 | 58.4 (2) | C10—C11—C13—O3 | −18.3 (3) |
C1—N1—C4—C3 | 58.7 (2) | C9i—C11—C13—O4 | −17.7 (3) |
N2—C3—C4—N1 | −57.9 (2) | C10—C11—C13—O4 | 161.22 (19) |
C8—N3—C5—C6 | −55.5 (2) | C16ii—C14—C15—C16 | 0.4 (3) |
C7—N4—C6—C5 | −56.4 (2) | C16ii—C14—C15—C17 | −178.07 (17) |
N3—C5—C6—N4 | 55.7 (2) | C14—C15—C16—C14ii | −0.4 (3) |
C6—N4—C7—C8 | 56.0 (2) | C17—C15—C16—C14ii | 178.04 (17) |
C5—N3—C8—C7 | 55.3 (2) | C14—C15—C16—C18 | −174.45 (18) |
N4—C7—C8—N3 | −55.3 (2) | C17—C15—C16—C18 | 3.9 (3) |
C11i—C9—C10—C11 | −0.6 (3) | C14—C15—C17—O6 | −157.34 (19) |
C11i—C9—C10—C12 | −177.06 (17) | C16—C15—C17—O6 | 24.3 (3) |
C9—C10—C11—C9i | 0.6 (3) | C14—C15—C17—O5 | 22.9 (3) |
C12—C10—C11—C9i | 176.84 (17) | C16—C15—C17—O5 | −155.48 (18) |
C9—C10—C11—C13 | −178.33 (17) | C14ii—C16—C18—O7 | −97.7 (2) |
C12—C10—C11—C13 | −2.1 (3) | C15—C16—C18—O7 | 76.5 (2) |
C9—C10—C12—O1 | 95.7 (2) | C14ii—C16—C18—O8 | 78.0 (2) |
C11—C10—C12—O1 | −80.6 (2) | C15—C16—C18—O8 | −107.8 (2) |
Symmetry codes: (i) −x+2, −y+1, −z+2; (ii) −x, −y+2, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1C···O5iii | 0.92 | 1.74 | 2.642 (2) | 166 |
N1—H1D···O7iv | 0.92 | 1.84 | 2.763 (2) | 178 |
N2—H2C···O1v | 0.92 | 1.82 | 2.723 (2) | 165 |
N2—H2D···O4 | 0.92 | 1.72 | 2.635 (2) | 179 |
N3—H3C···O2v | 0.92 | 1.90 | 2.787 (2) | 163 |
N3—H3D···O6 | 0.92 | 1.92 | 2.690 (2) | 141 |
N4—H4C···O8vi | 0.92 | 1.85 | 2.753 (2) | 168 |
N4—H4D···O3 | 0.92 | 2.00 | 2.748 (2) | 138 |
O1S—H1SA···O5SA | 0.82 | 2.02 | 2.837 (2) | 172 |
O1S—H1SA···O5SA | 0.82 | 2.02 | 2.837 (2) | 172 |
O1S—H1SB···O2vii | 0.82 | 1.95 | 2.763 (2) | 172 |
O2S—H2SA···O4Sv | 0.82 | 2.04 | 2.839 (2) | 165 |
O2S—H2SB···O8viii | 0.82 | 2.05 | 2.835 (2) | 160 |
O3S—H3SA···O2S | 0.82 | 1.90 | 2.722 (2) | 176 |
O3S—H3SB···O5iv | 0.82 | 2.00 | 2.817 (2) | 171 |
O4S—H4SA···O1 | 0.82 | 1.95 | 2.772 (2) | 175 |
O4S—H4SB···O3S | 0.82 | 1.95 | 2.764 (2) | 170 |
C5—H5A···O6SA | 0.99 | 2.50 | 3.288 (4) | 136 |
C5—H5B···O7vi | 0.99 | 2.35 | 3.272 (3) | 154 |
C7—H7A···O1v | 0.99 | 2.48 | 3.414 (3) | 156 |
C8—H8B···O4Sv | 0.99 | 2.51 | 3.299 (3) | 137 |
C4—H4B···Cg1iv | 0.99 | 2.64 | 3.518 (2) | 148 |
C4—H4B···Cg1viii | 0.99 | 2.64 | 3.518 (2) | 148 |
Symmetry codes: (iii) x−1, y−1, z; (iv) x, y−1, z; (v) x−1, y, z; (vi) x+1, y, z; (vii) −x+2, −y+1, −z+1; (viii) −x, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | 2C4H12N22+·C10H2O84−·6H2O |
Mr | 534.52 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 6.7420 (4), 12.4636 (7), 16.0100 (9) |
α, β, γ (°) | 99.092 (1), 90.347 (1), 105.528 (1) |
V (Å3) | 1278.27 (13) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.12 |
Crystal size (mm) | 0.23 × 0.21 × 0.17 |
Data collection | |
Diffractometer | Bruker APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.970, 0.982 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 13995, 5839, 4805 |
Rint | 0.027 |
(sin θ/λ)max (Å−1) | 0.650 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.059, 0.159, 1.02 |
No. of reflections | 5839 |
No. of parameters | 323 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 2.20, −0.60 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1C···O5i | 0.92 | 1.739 | 2.642 (2) | 166 |
N1—H1D···O7ii | 0.92 | 1.844 | 2.763 (2) | 178 |
N2—H2C···O1iii | 0.92 | 1.824 | 2.723 (2) | 165 |
N2—H2D···O4 | 0.92 | 1.715 | 2.635 (2) | 179 |
N3—H3C···O2iii | 0.92 | 1.895 | 2.787 (2) | 163 |
N3—H3D···O6 | 0.92 | 1.915 | 2.690 (2) | 141 |
N4—H4C···O8iv | 0.92 | 1.847 | 2.753 (2) | 168 |
N4—H4D···O3 | 0.92 | 1.996 | 2.748 (2) | 138 |
O1S—H1SA···O5SA | 0.82 | 2.022 | 2.837 (2) | 172 |
O1S—H1SA···O5SA | 0.82 | 2.022 | 2.837 (2) | 172 |
O1S—H1SB···O2v | 0.82 | 1.949 | 2.763 (2) | 172 |
O2S—H2SA···O4Siii | 0.82 | 2.039 | 2.839 (2) | 165 |
O2S—H2SB···O8vi | 0.82 | 2.052 | 2.835 (2) | 160 |
O3S—H3SA···O2S | 0.82 | 1.903 | 2.722 (2) | 176 |
O3S—H3SB···O5ii | 0.82 | 2.003 | 2.817 (2) | 171 |
O4S—H4SA···O1 | 0.82 | 1.954 | 2.772 (2) | 175 |
O4S—H4SB···O3S | 0.82 | 1.954 | 2.764 (2) | 170 |
C5—H5A···O6SA | 0.99 | 2.500 | 3.288 (4) | 136 |
C5—H5B···O7iv | 0.99 | 2.350 | 3.272 (3) | 154 |
C7—H7A···O1iii | 0.99 | 2.480 | 3.414 (3) | 156 |
C8—H8B···O4Siii | 0.99 | 2.510 | 3.299 (3) | 137 |
C4—H4B···Cg1ii | 0.99 | 2.64 | 3.518 (2) | 148 |
C4—H4B···Cg1vi | 0.99 | 2.64 | 3.518 (2) | 148 |
Symmetry codes: (i) x−1, y−1, z; (ii) x, y−1, z; (iii) x−1, y, z; (iv) x+1, y, z; (v) −x+2, −y+1, −z+1; (vi) −x, −y+1, −z+1. |
Acknowledgements
The authors acknowledge Tarbiat Moallem University for supporting this work.
References
Aghabozorg, H., Ghadermazi, M. & Attar Gharamaleki, J. (2006). Acta Cryst. E62, o3174–o3176. Web of Science CSD CrossRef IUCr Journals Google Scholar
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Arora, K. K. & Pedireddi, V. R. (2003). J. Org. Chem. 68, 9177–9185. Web of Science CSD CrossRef PubMed CAS Google Scholar
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Continuing the path to synthesize proton transfer compounds, our team works have recently been focused on forming ion pairs between benzene-1,2,4,5-tetracarboxylic acid and various organic bases such as propane-1,3-diamine (Aghabozorg et al., 2007) and 1,10-phenanthroline (Aghabozorg et al., 2006). Due to its flat and symmetric structure and four proton donor sites, benzene-1,2,4,5-tetracarboxylic acid has a potential of constructing a supramolecular network. Supramolecular assemblies of 1,2,4,5-benzenetetracarboxylic acid, with aza donor molecules such as 1,10-phenanthroline, 1,7-phenanthroline, phenazine, 4-(N,N-dimethylamino)pyridine, 1,2-bis(4-pyridyl)ethene, and 1,2-bis(4- pyridyl)ethane have been synthesized and characterized by single-crystal X-ray diffraction methods (Arora et al., 2003). Among the known structures, cyclic network mediated supramolecular assemblies of benzene-1,2,4,5-tetracarboxylic acid with pyridine and some of its derivatives is quite significant (Biradha et al., 1998). The title compound has a structure constituted of one fully deprotonated benzene-1,2,4,5-tetracarboxylic acid unit, two doubly protonated piperazine units and six water molecules, two of which are disordered.
Various hydrogen bonds are formed between the named fragments, the water molecules are hydrogen bonded to each other and to carboxylate groups by O—H···O bonds, piperazinium ions are linked to carboxylate groups by N—H···O bonds, also the carbon atoms of piperaziniedium ion have C—H···O hydrogen bonds to oxygen atoms of water molecules and carboxyl groups. It is notable that the shortest hydrogen bond N2—H2D···O4 has the least deviation i.e. 1° from linearity. As shown in Fig. 2, in the cell packing there are six water molecules surrounded by cationic and anionic fragments. So if the structure expanded and the layers appeared, it can be seen a channel in which water molecules are trapped. This is previously observed for ion pairs of the tetraacid (Arora et al., 2003), in which the three-dimensional arrangement of the layers are stacked such that the cavities align to yield channels. It appears that the size and direction of water molecules plays an important role in constructing of channel structures in the supramolecular assemblies of acid.
As shown in Fig. 3, there are C—H···π interactions between C4—H4B bond of piperazinium ion and two benzene rings containing C14, C15 and C16 atoms with different symmetry codes [(x, y - 1, z), (-x, -y + 1, 1 - z)] for which the C—H···π distance and angle are 3.518 (2) Å and 148°, respectively.
Finally in Fig. 4, it can be seen how ribbons of constituents of the compound are arranged.