metal-organic compounds
Poly[[bis[μ2-8-ethyl-5-oxo-2-(piperazin-1-yl)-5,8-dihydropyrido[2,3-d]pyrimidine-6-carboxylato]manganese(II)] dihydrate]
aSchool of Pharmaceutical Science, Harbin Medical University, Harbin 150086, People's Republic of China, and bSecond Hospital, Harbin Medical University, Harbin 150086, People's Republic of China
*Correspondence e-mail: anzhe6409@sina.com
In the title compound, {[Mn(C14H16N5O3)2]·2H2O}n, the MnII atom (site symmetry ) exhibits a distorted trans-MnN2O4 octahedral geometry defined by two monodentate N-bonded and two bidentate O,O′-bonded 8-ethyl-5-oxo-2-(piperazin-1-yl)-5,8-dihydropyrido[2,3-d]pyrimidine-6-carboxylate anions. An N—H⋯O hydrogen bond is present in the The extended two-dimensional structure is a square grid and the disordered uncoordinated water molecules occupy cavities within the grid.
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 1998); cell SAINT-Plus (Bruker, 1998); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536808006533/hb2703sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808006533/hb2703Isup2.hkl
A mixture of Mn(CH3COO)2.4H2O (0.061 g, 0.25 mmol), Hppa (0.15 g, 0.5 mmol), sodium hydroxide (0.04 g, 1 mmol) and water (12 ml) was stirred for 30 min in air. The mixture was then transferred to a 23 ml Teflon-lined hydrothermal bomb. The bomb was kept at 433 K for 72 h under autogenous pressure. Upon cooling, colourless prisms of (I) were obtained from the reaction mixture.
The carbon-bound H atoms were positioned geometrically (C—H = 0.93–0.97 Å) and refined as riding with Uiso(H) = 1.2Ueq(C). The N-bound H atom was located in a difference map and its position was freely refined with Uiso(H) = 1.2Ueq(N).
The water H atoms could not be placed due to disorder.
Data collection: SMART (Bruker, 1998); cell
SAINT-Plus (Bruker, 1998); data reduction: SAINT-Plus (Bruker, 1998); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).[Mn(C14H16N5O3)2]·2H2O | F(000) = 718.0 |
Mr = 695.58 | Dx = 1.399 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 4747 reflections |
a = 6.0422 (2) Å | θ = 2.5–28.3° |
b = 21.5673 (8) Å | µ = 0.47 mm−1 |
c = 12.7395 (5) Å | T = 295 K |
β = 99.617 (1)° | Prism, colorless |
V = 1636.8 (1) Å3 | 0.34 × 0.26 × 0.18 mm |
Z = 2 |
Bruker SMART CCD diffractometer | 3938 independent reflections |
Radiation source: fine-focus sealed tube | 3465 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.019 |
ω scans | θmax = 28.3°, θmin = 2.5° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −6→8 |
Tmin = 0.861, Tmax = 0.910 | k = −27→28 |
10030 measured reflections | l = −15→16 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.061 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.191 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.11 | w = 1/[σ2(Fo2) + (0.1066P)2 + 1.0983P] where P = (Fo2 + 2Fc2)/3 |
3938 reflections | (Δ/σ)max < 0.001 |
227 parameters | Δρmax = 0.98 e Å−3 |
1 restraint | Δρmin = −0.48 e Å−3 |
[Mn(C14H16N5O3)2]·2H2O | V = 1636.8 (1) Å3 |
Mr = 695.58 | Z = 2 |
Monoclinic, P21/c | Mo Kα radiation |
a = 6.0422 (2) Å | µ = 0.47 mm−1 |
b = 21.5673 (8) Å | T = 295 K |
c = 12.7395 (5) Å | 0.34 × 0.26 × 0.18 mm |
β = 99.617 (1)° |
Bruker SMART CCD diffractometer | 3938 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 3465 reflections with I > 2σ(I) |
Tmin = 0.861, Tmax = 0.910 | Rint = 0.019 |
10030 measured reflections |
R[F2 > 2σ(F2)] = 0.061 | 1 restraint |
wR(F2) = 0.191 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.11 | Δρmax = 0.98 e Å−3 |
3938 reflections | Δρmin = −0.48 e Å−3 |
227 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Mn1 | 0.5000 | 0.5000 | 0.5000 | 0.02831 (19) | |
O1W | 0.388 (4) | 0.5235 (7) | 0.9613 (10) | 0.244 (9) | 0.50 |
O1 | 0.7068 (3) | 0.49893 (7) | 0.38228 (16) | 0.0341 (4) | |
O2W | −0.081 (2) | 0.4426 (8) | 0.9246 (7) | 0.194 (6) | 0.50 |
O2 | 0.8721 (5) | 0.51863 (13) | 0.2451 (2) | 0.0717 (8) | |
O3 | 0.3574 (3) | 0.58106 (8) | 0.41354 (14) | 0.0378 (4) | |
N1 | 0.5078 (5) | 0.67158 (12) | 0.1504 (2) | 0.0533 (7) | |
N2 | −0.0007 (4) | 0.73723 (11) | 0.2985 (2) | 0.0464 (6) | |
N3 | 0.2395 (4) | 0.74681 (10) | 0.16596 (18) | 0.0432 (5) | |
N4 | −0.0102 (4) | 0.82368 (10) | 0.19027 (19) | 0.0384 (5) | |
N5 | −0.2339 (3) | 0.93726 (9) | 0.11005 (17) | 0.0322 (4) | |
H5N | −0.140 (4) | 0.9649 (12) | 0.146 (2) | 0.048* | |
C1 | 0.7282 (4) | 0.52991 (11) | 0.3018 (2) | 0.0358 (5) | |
C2 | 0.5782 (4) | 0.58537 (11) | 0.2731 (2) | 0.0354 (5) | |
C3 | 0.4044 (4) | 0.60559 (10) | 0.33118 (19) | 0.0313 (5) | |
C4 | 0.2852 (4) | 0.66087 (11) | 0.28824 (19) | 0.0336 (5) | |
C5 | 0.1042 (5) | 0.68542 (12) | 0.3304 (2) | 0.0425 (6) | |
H5A | 0.0546 | 0.6635 | 0.3848 | 0.051* | |
C6 | 0.0805 (4) | 0.76813 (12) | 0.2189 (2) | 0.0360 (5) | |
C7 | 0.3383 (5) | 0.69362 (12) | 0.2010 (2) | 0.0395 (6) | |
C8 | 0.6170 (5) | 0.61896 (14) | 0.1875 (2) | 0.0496 (7) | |
H8A | 0.7282 | 0.6046 | 0.1512 | 0.059* | |
C9 | 0.5717 (8) | 0.7043 (2) | 0.0566 (3) | 0.0725 (12) | |
H9A | 0.5531 | 0.7486 | 0.0645 | 0.087* | |
H9B | 0.7285 | 0.6963 | 0.0537 | 0.087* | |
C10 | 0.4373 (10) | 0.6840 (4) | −0.0400 (5) | 0.116 (2) | |
H10A | 0.4583 | 0.6403 | −0.0488 | 0.174* | |
H10B | 0.4811 | 0.7059 | −0.0989 | 0.174* | |
H10C | 0.2822 | 0.6923 | −0.0375 | 0.174* | |
C11 | −0.1446 (6) | 0.85820 (14) | 0.2560 (2) | 0.0499 (7) | |
H11A | −0.0477 | 0.8852 | 0.3045 | 0.060* | |
H11B | −0.2170 | 0.8295 | 0.2980 | 0.060* | |
C12 | −0.3226 (5) | 0.89702 (13) | 0.1855 (2) | 0.0433 (6) | |
H12A | −0.4326 | 0.8693 | 0.1460 | 0.052* | |
H12B | −0.3996 | 0.9225 | 0.2308 | 0.052* | |
C13 | −0.1018 (4) | 0.89946 (12) | 0.0466 (2) | 0.0372 (5) | |
H13A | −0.0347 | 0.9264 | −0.0003 | 0.045* | |
H13B | −0.2015 | 0.8710 | 0.0025 | 0.045* | |
C14 | 0.0812 (4) | 0.86281 (12) | 0.1146 (2) | 0.0382 (6) | |
H14A | 0.1573 | 0.8371 | 0.0693 | 0.046* | |
H14B | 0.1906 | 0.8911 | 0.1530 | 0.046* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Mn1 | 0.0350 (3) | 0.0187 (3) | 0.0304 (3) | −0.00041 (16) | 0.0030 (2) | 0.00255 (16) |
O1W | 0.47 (3) | 0.155 (12) | 0.111 (9) | 0.000 (15) | 0.058 (14) | −0.057 (9) |
O1 | 0.0407 (10) | 0.0237 (9) | 0.0383 (10) | 0.0041 (6) | 0.0073 (8) | 0.0040 (6) |
O2W | 0.203 (11) | 0.307 (17) | 0.088 (6) | −0.110 (12) | 0.076 (7) | −0.028 (8) |
O2 | 0.0854 (18) | 0.0730 (16) | 0.0674 (16) | 0.0491 (15) | 0.0441 (14) | 0.0338 (13) |
O3 | 0.0448 (10) | 0.0297 (9) | 0.0403 (9) | 0.0085 (7) | 0.0110 (7) | 0.0122 (7) |
N1 | 0.0730 (17) | 0.0433 (13) | 0.0500 (14) | 0.0245 (12) | 0.0294 (12) | 0.0196 (11) |
N2 | 0.0498 (13) | 0.0386 (12) | 0.0550 (14) | 0.0152 (10) | 0.0211 (11) | 0.0213 (11) |
N3 | 0.0549 (13) | 0.0339 (11) | 0.0434 (12) | 0.0165 (10) | 0.0157 (10) | 0.0150 (9) |
N4 | 0.0418 (11) | 0.0301 (10) | 0.0458 (12) | 0.0107 (9) | 0.0146 (9) | 0.0133 (9) |
N5 | 0.0344 (10) | 0.0231 (9) | 0.0382 (10) | 0.0029 (7) | 0.0034 (8) | 0.0012 (8) |
C1 | 0.0410 (13) | 0.0311 (12) | 0.0355 (12) | 0.0080 (10) | 0.0071 (10) | 0.0029 (9) |
C2 | 0.0429 (13) | 0.0281 (11) | 0.0360 (12) | 0.0084 (9) | 0.0092 (10) | 0.0040 (9) |
C3 | 0.0367 (11) | 0.0227 (10) | 0.0337 (11) | 0.0032 (9) | 0.0033 (9) | 0.0042 (8) |
C4 | 0.0396 (12) | 0.0265 (11) | 0.0352 (12) | 0.0060 (9) | 0.0073 (9) | 0.0067 (9) |
C5 | 0.0491 (15) | 0.0339 (13) | 0.0475 (15) | 0.0103 (11) | 0.0167 (12) | 0.0168 (11) |
C6 | 0.0377 (12) | 0.0307 (12) | 0.0398 (13) | 0.0066 (9) | 0.0066 (10) | 0.0090 (10) |
C7 | 0.0506 (14) | 0.0313 (12) | 0.0386 (13) | 0.0109 (11) | 0.0132 (11) | 0.0082 (10) |
C8 | 0.0609 (17) | 0.0438 (15) | 0.0485 (16) | 0.0220 (13) | 0.0219 (13) | 0.0120 (12) |
C9 | 0.091 (3) | 0.071 (2) | 0.065 (2) | 0.035 (2) | 0.041 (2) | 0.0293 (19) |
C10 | 0.111 (4) | 0.154 (6) | 0.085 (4) | 0.032 (4) | 0.022 (3) | 0.021 (4) |
C11 | 0.0604 (17) | 0.0465 (15) | 0.0478 (15) | 0.0251 (14) | 0.0234 (13) | 0.0176 (13) |
C12 | 0.0427 (13) | 0.0368 (13) | 0.0535 (16) | 0.0129 (11) | 0.0169 (12) | 0.0133 (12) |
C13 | 0.0394 (13) | 0.0308 (12) | 0.0414 (13) | 0.0087 (10) | 0.0071 (10) | 0.0078 (10) |
C14 | 0.0365 (12) | 0.0304 (12) | 0.0497 (14) | 0.0075 (9) | 0.0128 (11) | 0.0136 (10) |
Mn1—O1 | 2.106 (2) | C2—C8 | 1.361 (4) |
Mn1—O1i | 2.106 (2) | C2—C3 | 1.450 (3) |
Mn1—O3 | 2.1667 (16) | C3—C4 | 1.452 (3) |
Mn1—O3i | 2.1667 (16) | C4—C7 | 1.399 (3) |
Mn1—N5ii | 2.372 (2) | C4—C5 | 1.400 (4) |
Mn1—N5iii | 2.3723 (19) | C5—H5A | 0.9300 |
O1—C1 | 1.248 (3) | C8—H8A | 0.9300 |
O2—C1 | 1.244 (3) | C9—C10 | 1.425 (8) |
O3—C3 | 1.249 (3) | C9—H9A | 0.9700 |
N1—C8 | 1.357 (3) | C9—H9B | 0.9700 |
N1—C7 | 1.382 (4) | C10—H10A | 0.9600 |
N1—C9 | 1.493 (4) | C10—H10B | 0.9600 |
N2—C5 | 1.315 (3) | C10—H10C | 0.9600 |
N2—C6 | 1.371 (4) | C11—C12 | 1.531 (4) |
N3—C7 | 1.335 (3) | C11—H11A | 0.9700 |
N3—C6 | 1.344 (3) | C11—H11B | 0.9700 |
N4—C6 | 1.343 (3) | C12—H12A | 0.9700 |
N4—C14 | 1.457 (3) | C12—H12B | 0.9700 |
N4—C11 | 1.463 (3) | C13—C14 | 1.510 (3) |
N5—C12 | 1.461 (3) | C13—H13A | 0.9700 |
N5—C13 | 1.474 (3) | C13—H13B | 0.9700 |
N5—Mn1iv | 2.3723 (19) | C14—H14A | 0.9700 |
N5—H5N | 0.90 (3) | C14—H14B | 0.9700 |
C1—C2 | 1.508 (3) | ||
O1—Mn1—O1i | 180.0 | N4—C6—N3 | 117.5 (2) |
O1—Mn1—O3 | 83.09 (6) | N4—C6—N2 | 117.0 (2) |
O1i—Mn1—O3 | 96.91 (6) | N3—C6—N2 | 125.4 (2) |
O1—Mn1—O3i | 96.91 (6) | N3—C7—N1 | 117.7 (2) |
O1i—Mn1—O3i | 83.09 (6) | N3—C7—C4 | 123.4 (2) |
O3—Mn1—O3i | 180.0 | N1—C7—C4 | 118.9 (2) |
O1—Mn1—N5ii | 90.17 (7) | N1—C8—C2 | 125.8 (3) |
O1i—Mn1—N5ii | 89.83 (7) | N1—C8—H8A | 117.1 |
O3—Mn1—N5ii | 90.74 (7) | C2—C8—H8A | 117.1 |
O3i—Mn1—N5ii | 89.26 (7) | C10—C9—N1 | 111.2 (5) |
O1—Mn1—N5iii | 89.83 (7) | C10—C9—H9A | 109.4 |
O1i—Mn1—N5iii | 90.17 (7) | N1—C9—H9A | 109.4 |
O3—Mn1—N5iii | 89.26 (7) | C10—C9—H9B | 109.4 |
O3i—Mn1—N5iii | 90.73 (7) | N1—C9—H9B | 109.4 |
N5ii—Mn1—N5iii | 180.0 | H9A—C9—H9B | 108.0 |
C1—O1—Mn1 | 137.22 (16) | C9—C10—H10A | 109.5 |
C3—O3—Mn1 | 129.93 (16) | C9—C10—H10B | 109.5 |
C8—N1—C7 | 118.7 (2) | H10A—C10—H10B | 109.5 |
C8—N1—C9 | 119.8 (3) | C9—C10—H10C | 109.5 |
C7—N1—C9 | 121.4 (2) | H10A—C10—H10C | 109.5 |
C5—N2—C6 | 115.3 (2) | H10B—C10—H10C | 109.5 |
C7—N3—C6 | 116.3 (2) | N4—C11—C12 | 110.2 (2) |
C6—N4—C14 | 120.9 (2) | N4—C11—H11A | 109.6 |
C6—N4—C11 | 122.6 (2) | C12—C11—H11A | 109.6 |
C14—N4—C11 | 113.1 (2) | N4—C11—H11B | 109.6 |
C12—N5—C13 | 108.90 (19) | C12—C11—H11B | 109.6 |
C12—N5—Mn1iv | 116.15 (15) | H11A—C11—H11B | 108.1 |
C13—N5—Mn1iv | 111.54 (14) | N5—C12—C11 | 114.3 (2) |
C12—N5—H5N | 110 (2) | N5—C12—H12A | 108.7 |
C13—N5—H5N | 107 (2) | C11—C12—H12A | 108.7 |
Mn1iv—N5—H5N | 103 (2) | N5—C12—H12B | 108.7 |
O2—C1—O1 | 123.4 (2) | C11—C12—H12B | 108.7 |
O2—C1—C2 | 117.6 (2) | H12A—C12—H12B | 107.6 |
O1—C1—C2 | 118.9 (2) | N5—C13—C14 | 112.8 (2) |
C8—C2—C3 | 119.0 (2) | N5—C13—H13A | 109.0 |
C8—C2—C1 | 116.1 (2) | C14—C13—H13A | 109.0 |
C3—C2—C1 | 124.9 (2) | N5—C13—H13B | 109.0 |
O3—C3—C2 | 126.0 (2) | C14—C13—H13B | 109.0 |
O3—C3—C4 | 119.8 (2) | H13A—C13—H13B | 107.8 |
C2—C3—C4 | 114.3 (2) | N4—C14—C13 | 111.1 (2) |
C7—C4—C5 | 114.3 (2) | N4—C14—H14A | 109.4 |
C7—C4—C3 | 123.3 (2) | C13—C14—H14A | 109.4 |
C5—C4—C3 | 122.4 (2) | N4—C14—H14B | 109.4 |
N2—C5—C4 | 124.8 (2) | C13—C14—H14B | 109.4 |
N2—C5—H5A | 117.6 | H14A—C14—H14B | 108.0 |
C4—C5—H5A | 117.6 | ||
O3—Mn1—O1—C1 | −1.4 (3) | C7—N3—C6—N4 | 175.3 (3) |
O3i—Mn1—O1—C1 | 178.6 (3) | C7—N3—C6—N2 | −6.2 (4) |
N5ii—Mn1—O1—C1 | −92.1 (3) | C5—N2—C6—N4 | −174.7 (3) |
N5iii—Mn1—O1—C1 | 87.9 (3) | C5—N2—C6—N3 | 6.8 (4) |
O1—Mn1—O3—C3 | 1.4 (2) | C6—N3—C7—N1 | −177.9 (3) |
O1i—Mn1—O3—C3 | −178.6 (2) | C6—N3—C7—C4 | −0.5 (4) |
N5ii—Mn1—O3—C3 | 91.5 (2) | C8—N1—C7—N3 | 177.3 (3) |
N5iii—Mn1—O3—C3 | −88.5 (2) | C9—N1—C7—N3 | −2.9 (5) |
Mn1—O1—C1—O2 | 179.3 (2) | C8—N1—C7—C4 | −0.1 (5) |
Mn1—O1—C1—C2 | 1.5 (4) | C9—N1—C7—C4 | 179.7 (3) |
O2—C1—C2—C8 | −1.0 (4) | C5—C4—C7—N3 | 5.6 (4) |
O1—C1—C2—C8 | 177.0 (3) | C3—C4—C7—N3 | −175.2 (3) |
O2—C1—C2—C3 | −179.1 (3) | C5—C4—C7—N1 | −177.1 (3) |
O1—C1—C2—C3 | −1.2 (4) | C3—C4—C7—N1 | 2.1 (4) |
Mn1—O3—C3—C2 | −1.8 (4) | C7—N1—C8—C2 | −1.3 (5) |
Mn1—O3—C3—C4 | −179.39 (16) | C9—N1—C8—C2 | 178.8 (4) |
C8—C2—C3—O3 | −176.6 (3) | C3—C2—C8—N1 | 0.8 (5) |
C1—C2—C3—O3 | 1.5 (4) | C1—C2—C8—N1 | −177.5 (3) |
C8—C2—C3—C4 | 1.1 (4) | C8—N1—C9—C10 | 92.7 (5) |
C1—C2—C3—C4 | 179.2 (2) | C7—N1—C9—C10 | −87.1 (5) |
O3—C3—C4—C7 | 175.3 (2) | C6—N4—C11—C12 | −148.9 (3) |
C2—C3—C4—C7 | −2.5 (4) | C14—N4—C11—C12 | 51.9 (3) |
O3—C3—C4—C5 | −5.6 (4) | C13—N5—C12—C11 | 54.0 (3) |
C2—C3—C4—C5 | 176.6 (3) | Mn1iv—N5—C12—C11 | −179.1 (2) |
C6—N2—C5—C4 | −0.7 (5) | N4—C11—C12—N5 | −52.9 (4) |
C7—C4—C5—N2 | −5.0 (4) | C12—N5—C13—C14 | −55.0 (3) |
C3—C4—C5—N2 | 175.8 (3) | Mn1iv—N5—C13—C14 | 175.47 (16) |
C14—N4—C6—N3 | −8.0 (4) | C6—N4—C14—C13 | 146.2 (3) |
C11—N4—C6—N3 | −165.6 (3) | C11—N4—C14—C13 | −54.2 (3) |
C14—N4—C6—N2 | 173.4 (3) | N5—C13—C14—N4 | 55.9 (3) |
C11—N4—C6—N2 | 15.8 (4) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x+1, −y+3/2, z+1/2; (iii) −x, y−1/2, −z+1/2; (iv) −x, y+1/2, −z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N5—H5N···O2v | 0.89 (1) | 2.27 (1) | 3.149 (3) | 169 (3) |
Symmetry code: (v) −x+1, y+1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | [Mn(C14H16N5O3)2]·2H2O |
Mr | 695.58 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 295 |
a, b, c (Å) | 6.0422 (2), 21.5673 (8), 12.7395 (5) |
β (°) | 99.617 (1) |
V (Å3) | 1636.8 (1) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.47 |
Crystal size (mm) | 0.34 × 0.26 × 0.18 |
Data collection | |
Diffractometer | Bruker SMART CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.861, 0.910 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10030, 3938, 3465 |
Rint | 0.019 |
(sin θ/λ)max (Å−1) | 0.667 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.061, 0.191, 1.11 |
No. of reflections | 3938 |
No. of parameters | 227 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.98, −0.48 |
Computer programs: SMART (Bruker, 1998), SAINT-Plus (Bruker, 1998), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Mn1—O1 | 2.106 (2) | Mn1—N5i | 2.372 (2) |
Mn1—O3 | 2.1667 (16) |
Symmetry code: (i) x+1, −y+3/2, z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N5—H5N···O2ii | 0.893 (10) | 2.268 (12) | 3.149 (3) | 169 (3) |
Symmetry code: (ii) −x+1, y+1/2, −z+1/2. |
Acknowledgements
The authors thank the Innovation Science Foundation of Harbin Medical University for financial support (grant No. 060041).
References
Bruker (1998). SMART, SAINT-Plus and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Mizuki, Y., Fujiwara, I. & Yamaguchi, T. (1996). J. Antimicrob. Chemother. Suppl. A, 37, 41–45. CrossRef CAS Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Pipemidic acid (Hppa, C14H17N5O3, 8-Ethyl-5,8-dihydro-5-oxo-2- (1-piperazinyl)-pyrido(2,3 - d)-pyrimidine-6-carboxylic acid) is member of a class of quinolones used to treat infections (Mizuki et al., 1996). The metal complexes of the ppa anion have not been reported; the title manganese(II) complex, (I), is reported here (Fig. 1).
The MnII atom in (I) with site symmetry 1 is coordinated by four oxygen atoms and two N atoms from four ppa ligands (two monodentate-N and two O,O-bidentate) (Table 1) to form a square grid propagating in (Fig. 2). An N—H···O hydrogen bond (Table 2) helps to stabilize this arrangement.
The disordered, uncoordinated, water molecules occupy cavities within the grid. In the present study, their attached H atoms could not be located.