organic compounds
4-[5-(4-Pyridyl)-1,3,4-oxadiazol-2-yl]pyridine N-oxide–isophthalic acid (1/1)
aCollege of Chemistry, Chemical Engineering and Materials Science, Shandong Normal University, Jinan 250014, People's Republic of China
*Correspondence e-mail: yubindong@sdnu.edu.cn
The title compound, C12H8N4O2·C8H6O4, was synthesized from 4-[5-(4-pyridyl)-1,3,4-oxadiazol-2-yl]pyridine N-oxide and isophthalic acid. The two molecules are linked through O—H⋯O and O—H⋯N hydrogen bonds. Weak intramolecular π–π interactions between the two hydrogen-bonded chains result in the formation a one-dimensional supramolecular curved tape (the face-to-face distance between the pyridine N-oxide ring and the benzene ring is 3.7 Å).
Related literature
For related literature, see: Beckmann & Jänicke (2006); Dong et al. (2003); Du et al. (2006); Hunter (1994); Kitagawa et al. (2004); Long et al. (2004); Lu et al. (1997); Ma et al. (2005); Ren et al. (1995); Tan et al. (2006).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: SMART (Bruker 2000); cell SMART; data reduction: SAINT (Bruker 2000); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536808012622/bv2095sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808012622/bv2095Isup2.hkl
L1 (2,5-bis(4-pyridyl)-1,3,4-oxadiazole) was prepared according to literature methods (Ren et al., 1995). L1 (1.1 g, 5 mmol), 1.0 ml hydrogen dioxide 30% solution and 3.0 ml acetic acid were mixed and refluxed at 343–353 K for 20 h. After removal of solvent under vacuum, the residue was purified on a silica gel column using CH2Cl2/CH3OH (15:1, v/v) as the δ 8.89–8.91 (d, 2H, 2C5H4N), 8.34–8.37 (d, 2H, 2C5H4NO), 7.99–8.06 (m, 4H, 2C5H4N, 2C5H4NO). IR (KBr pellet cm-1): 3423(s), 1620(m), 1563(m), 1537(m), 1475(s), 1439(s), 1407(s), 1272(s), 1174(s), 1111(m), 965(m), 848(m), 740(m), 703(s), 644(s), 509(m).
to afford L2, Yield: 38%. Mp: 501–503 K. 1H NMR (DMSO, 300 MHz, p.p.m.):A CH2Cl2 and CH3OH solution (10 ml, 1:1, v/v) of L2 (24 mg, 0.1 mmol) and isophthalic acid (16.6 mg, 0.1 mmol) kept at room temperature. After a few days yellow block crystals (1) were obtained (36 mg). Yield: 89%.
H atoms on O atoms were located in a difference Fourier map and refined as riding in their as-found relative positions, with Uiso(H) = 1.5Ueq(O). Other H atoms were placed in calculated positions, with C—H = 0.93 Å, and refined in riding mode, with Uiso(H) = 1.2Ueq(C) (aromatic).
Data collection: SMART (Bruker 2000); cell
SMART (Bruker 2000); data reduction: SAINT (Bruker 2000); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C12H8N4O2·C8H6O4 | Z = 2 |
Mr = 406.35 | F(000) = 420 |
Triclinic, P1 | Dx = 1.475 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.0993 (18) Å | Cell parameters from 893 reflections |
b = 7.1770 (19) Å | θ = 3.2–21.1° |
c = 19.823 (5) Å | µ = 0.11 mm−1 |
α = 93.003 (4)° | T = 298 K |
β = 98.481 (3)° | Bar, colourless |
γ = 112.745 (4)° | 0.30 × 0.15 × 0.06 mm |
V = 914.6 (4) Å3 |
Bruker SMART APEX diffractometer | 1972 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.027 |
Graphite monochromator | θmax = 25.0°, θmin = 3.1° |
ϕ and ω scans | h = −8→8 |
4661 measured reflections | k = −8→8 |
3189 independent reflections | l = −17→23 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.052 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.132 | H-atom parameters constrained |
S = 0.98 | w = 1/[σ2(Fo2) + (0.0637P)2] where P = (Fo2 + 2Fc2)/3 |
3189 reflections | (Δ/σ)max = 0.001 |
272 parameters | Δρmax = 0.30 e Å−3 |
0 restraints | Δρmin = −0.15 e Å−3 |
C12H8N4O2·C8H6O4 | γ = 112.745 (4)° |
Mr = 406.35 | V = 914.6 (4) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.0993 (18) Å | Mo Kα radiation |
b = 7.1770 (19) Å | µ = 0.11 mm−1 |
c = 19.823 (5) Å | T = 298 K |
α = 93.003 (4)° | 0.30 × 0.15 × 0.06 mm |
β = 98.481 (3)° |
Bruker SMART APEX diffractometer | 1972 reflections with I > 2σ(I) |
4661 measured reflections | Rint = 0.027 |
3189 independent reflections |
R[F2 > 2σ(F2)] = 0.052 | 0 restraints |
wR(F2) = 0.132 | H-atom parameters constrained |
S = 0.98 | Δρmax = 0.30 e Å−3 |
3189 reflections | Δρmin = −0.15 e Å−3 |
272 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.7708 (3) | 0.9021 (3) | 0.64281 (9) | 0.0693 (6) | |
O2 | 1.0221 (3) | 0.8709 (4) | 0.59557 (10) | 0.0861 (7) | |
O5 | −0.2941 (3) | 0.2221 (4) | −0.02763 (9) | 0.0882 (8) | |
O3 | 0.8643 (3) | 1.0843 (3) | 0.88695 (9) | 0.0738 (6) | |
H3 | 0.8309 | 1.1276 | 0.9203 | 0.111* | |
O4 | 1.1774 (3) | 1.2181 (3) | 0.95238 (9) | 0.0726 (6) | |
C1 | −0.4071 (4) | 0.2792 (4) | 0.06980 (13) | 0.0592 (8) | |
H1A | −0.5408 | 0.2374 | 0.0446 | 0.071* | |
C2 | −0.3697 (4) | 0.3405 (4) | 0.13821 (12) | 0.0528 (7) | |
H2 | −0.4781 | 0.3399 | 0.1595 | 0.063* | |
C3 | −0.1721 (4) | 0.4035 (4) | 0.17649 (11) | 0.0427 (6) | |
C4 | −0.0155 (4) | 0.4016 (4) | 0.14322 (12) | 0.0515 (7) | |
H4 | 0.1189 | 0.4429 | 0.1678 | 0.062* | |
C5 | −0.0572 (4) | 0.3385 (4) | 0.07365 (12) | 0.0558 (7) | |
H5A | 0.0489 | 0.3375 | 0.0513 | 0.067* | |
C6 | −0.1345 (4) | 0.4706 (4) | 0.24973 (12) | 0.0436 (6) | |
C7 | 0.0337 (4) | 0.5784 (4) | 0.35129 (11) | 0.0431 (6) | |
C8 | 0.2083 (4) | 0.6463 (4) | 0.40831 (11) | 0.0415 (6) | |
C9 | 0.1803 (4) | 0.7064 (4) | 0.47216 (12) | 0.0496 (7) | |
H9 | 0.0533 | 0.7076 | 0.4782 | 0.059* | |
C10 | 0.3421 (4) | 0.7639 (4) | 0.52633 (12) | 0.0520 (7) | |
H10 | 0.3205 | 0.8000 | 0.5694 | 0.062* | |
C11 | 0.5555 (4) | 0.7154 (4) | 0.45907 (13) | 0.0551 (7) | |
H11 | 0.6856 | 0.7205 | 0.4542 | 0.066* | |
C12 | 0.4001 (4) | 0.6505 (4) | 0.40169 (12) | 0.0490 (7) | |
H12 | 0.4245 | 0.6105 | 0.3596 | 0.059* | |
C13 | 0.9602 (4) | 0.9161 (4) | 0.64414 (14) | 0.0521 (7) | |
C14 | 1.0945 (4) | 0.9948 (4) | 0.71368 (11) | 0.0453 (6) | |
C15 | 1.0149 (4) | 1.0271 (4) | 0.77116 (12) | 0.0451 (6) | |
H15 | 0.8738 | 0.9975 | 0.7670 | 0.054* | |
C16 | 1.1455 (4) | 1.1037 (4) | 0.83507 (11) | 0.0436 (6) | |
C17 | 1.3553 (4) | 1.1470 (4) | 0.84013 (13) | 0.0533 (7) | |
H17 | 1.4443 | 1.1995 | 0.8822 | 0.064* | |
C18 | 1.4324 (4) | 1.1130 (4) | 0.78334 (13) | 0.0577 (8) | |
H18 | 1.5734 | 1.1419 | 0.7874 | 0.069* | |
C19 | 1.3043 (4) | 1.0369 (4) | 0.72065 (13) | 0.0542 (7) | |
H19 | 1.3586 | 1.0134 | 0.6827 | 0.065* | |
C20 | 1.0666 (4) | 1.1418 (4) | 0.89757 (13) | 0.0509 (7) | |
N1 | −0.2515 (3) | 0.2788 (3) | 0.03830 (10) | 0.0569 (6) | |
N2 | −0.2670 (3) | 0.4826 (3) | 0.28576 (10) | 0.0511 (6) | |
N3 | −0.1552 (3) | 0.5550 (3) | 0.35274 (10) | 0.0529 (6) | |
N4 | 0.5295 (3) | 0.7709 (3) | 0.52071 (10) | 0.0525 (6) | |
H1 | 0.7016 | 0.8526 | 0.6043 | 0.079* | |
O6 | 0.0597 (2) | 0.5275 (2) | 0.28698 (7) | 0.0451 (5) |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0608 (14) | 0.0982 (17) | 0.0411 (11) | 0.0313 (12) | −0.0073 (9) | −0.0095 (10) |
O2 | 0.0854 (16) | 0.128 (2) | 0.0449 (12) | 0.0492 (15) | 0.0062 (11) | −0.0239 (12) |
O5 | 0.0759 (15) | 0.157 (2) | 0.0339 (12) | 0.0592 (15) | −0.0082 (10) | −0.0223 (12) |
O3 | 0.0545 (13) | 0.1118 (18) | 0.0450 (12) | 0.0277 (12) | 0.0025 (9) | −0.0144 (11) |
O4 | 0.0630 (13) | 0.1144 (18) | 0.0341 (11) | 0.0374 (12) | −0.0070 (9) | −0.0135 (11) |
C1 | 0.0494 (17) | 0.077 (2) | 0.0459 (17) | 0.0259 (15) | −0.0048 (13) | −0.0079 (14) |
C2 | 0.0514 (17) | 0.0658 (19) | 0.0379 (16) | 0.0239 (14) | 0.0000 (12) | −0.0024 (13) |
C3 | 0.0490 (16) | 0.0424 (16) | 0.0352 (14) | 0.0190 (12) | 0.0020 (12) | 0.0006 (11) |
C4 | 0.0498 (17) | 0.0596 (19) | 0.0377 (16) | 0.0182 (14) | −0.0013 (12) | −0.0006 (12) |
C5 | 0.0523 (18) | 0.075 (2) | 0.0405 (16) | 0.0282 (15) | 0.0051 (13) | 0.0002 (14) |
C6 | 0.0501 (17) | 0.0421 (16) | 0.0331 (14) | 0.0167 (13) | −0.0027 (12) | 0.0002 (11) |
C7 | 0.0534 (17) | 0.0443 (16) | 0.0326 (15) | 0.0210 (13) | 0.0079 (12) | 0.0010 (11) |
C8 | 0.0474 (16) | 0.0436 (16) | 0.0313 (14) | 0.0182 (12) | 0.0019 (11) | 0.0009 (11) |
C9 | 0.0487 (16) | 0.0590 (18) | 0.0375 (15) | 0.0193 (14) | 0.0060 (12) | −0.0018 (12) |
C10 | 0.0591 (19) | 0.0614 (19) | 0.0319 (15) | 0.0225 (15) | 0.0052 (13) | −0.0025 (12) |
C11 | 0.0491 (17) | 0.066 (2) | 0.0508 (18) | 0.0258 (15) | 0.0033 (14) | 0.0032 (14) |
C12 | 0.0551 (18) | 0.0575 (18) | 0.0338 (15) | 0.0228 (14) | 0.0073 (13) | −0.0006 (12) |
C13 | 0.0625 (19) | 0.0471 (18) | 0.0468 (18) | 0.0236 (14) | 0.0068 (14) | 0.0024 (13) |
C14 | 0.0574 (17) | 0.0467 (17) | 0.0315 (14) | 0.0233 (13) | 0.0020 (12) | −0.0004 (11) |
C15 | 0.0472 (15) | 0.0468 (16) | 0.0417 (15) | 0.0221 (13) | 0.0003 (12) | 0.0039 (12) |
C16 | 0.0492 (16) | 0.0482 (16) | 0.0329 (14) | 0.0220 (13) | −0.0005 (12) | 0.0029 (11) |
C17 | 0.0537 (18) | 0.0604 (19) | 0.0428 (16) | 0.0251 (15) | −0.0042 (13) | −0.0001 (13) |
C18 | 0.0508 (17) | 0.073 (2) | 0.0485 (18) | 0.0270 (16) | 0.0037 (14) | 0.0004 (15) |
C19 | 0.0609 (19) | 0.0605 (19) | 0.0458 (17) | 0.0285 (15) | 0.0126 (14) | 0.0029 (13) |
C20 | 0.0509 (18) | 0.0600 (19) | 0.0408 (16) | 0.0251 (14) | −0.0007 (13) | 0.0014 (13) |
N1 | 0.0585 (16) | 0.0779 (18) | 0.0301 (13) | 0.0295 (13) | −0.0054 (11) | −0.0088 (11) |
N2 | 0.0505 (14) | 0.0635 (16) | 0.0366 (13) | 0.0230 (12) | 0.0021 (10) | −0.0024 (10) |
N3 | 0.0525 (15) | 0.0684 (16) | 0.0351 (13) | 0.0244 (12) | 0.0016 (10) | −0.0013 (10) |
N4 | 0.0582 (15) | 0.0540 (15) | 0.0382 (13) | 0.0189 (12) | −0.0012 (11) | 0.0011 (10) |
O6 | 0.0486 (11) | 0.0548 (11) | 0.0293 (9) | 0.0211 (9) | 0.0009 (8) | −0.0035 (7) |
O1—C13 | 1.306 (3) | C8—C12 | 1.377 (3) |
O1—H1 | 0.8221 | C8—C9 | 1.382 (3) |
O2—C13 | 1.195 (3) | C9—C10 | 1.366 (3) |
O5—N1 | 1.303 (2) | C9—H9 | 0.9300 |
O3—C20 | 1.312 (3) | C10—N4 | 1.333 (3) |
O3—H3 | 0.8200 | C10—H10 | 0.9300 |
O4—C20 | 1.205 (3) | C11—N4 | 1.326 (3) |
C1—N1 | 1.347 (3) | C11—C12 | 1.380 (3) |
C1—C2 | 1.358 (3) | C11—H11 | 0.9300 |
C1—H1A | 0.9300 | C12—H12 | 0.9300 |
C2—C3 | 1.381 (3) | C13—C14 | 1.497 (3) |
C2—H2 | 0.9300 | C14—C19 | 1.384 (3) |
C3—C4 | 1.378 (3) | C14—C15 | 1.391 (3) |
C3—C6 | 1.457 (3) | C15—C16 | 1.398 (3) |
C4—C5 | 1.380 (3) | C15—H15 | 0.9300 |
C4—H4 | 0.9300 | C16—C17 | 1.385 (3) |
C5—N1 | 1.343 (3) | C16—C20 | 1.487 (3) |
C5—H5A | 0.9300 | C17—C18 | 1.372 (3) |
C6—N2 | 1.287 (3) | C17—H17 | 0.9300 |
C6—O6 | 1.358 (3) | C18—C19 | 1.372 (3) |
C7—N3 | 1.290 (3) | C18—H18 | 0.9300 |
C7—O6 | 1.366 (3) | C19—H19 | 0.9300 |
C7—C8 | 1.454 (3) | N2—N3 | 1.400 (3) |
C13—O1—H1 | 109.3 | C8—C12—C11 | 118.4 (2) |
C20—O3—H3 | 109.5 | C8—C12—H12 | 120.8 |
N1—C1—C2 | 120.3 (2) | C11—C12—H12 | 120.8 |
N1—C1—H1A | 119.8 | O2—C13—O1 | 124.3 (3) |
C2—C1—H1A | 119.8 | O2—C13—C14 | 122.8 (3) |
C1—C2—C3 | 120.7 (2) | O1—C13—C14 | 112.8 (2) |
C1—C2—H2 | 119.7 | C19—C14—C15 | 119.2 (2) |
C3—C2—H2 | 119.7 | C19—C14—C13 | 118.7 (2) |
C4—C3—C2 | 118.0 (2) | C15—C14—C13 | 122.0 (2) |
C4—C3—C6 | 122.1 (2) | C14—C15—C16 | 120.4 (2) |
C2—C3—C6 | 119.9 (2) | C14—C15—H15 | 119.8 |
C3—C4—C5 | 120.3 (2) | C16—C15—H15 | 119.8 |
C3—C4—H4 | 119.8 | C17—C16—C15 | 118.9 (2) |
C5—C4—H4 | 119.8 | C17—C16—C20 | 119.1 (2) |
N1—C5—C4 | 119.7 (2) | C15—C16—C20 | 122.0 (2) |
N1—C5—H5A | 120.1 | C18—C17—C16 | 120.3 (2) |
C4—C5—H5A | 120.1 | C18—C17—H17 | 119.8 |
N2—C6—O6 | 113.3 (2) | C16—C17—H17 | 119.8 |
N2—C6—C3 | 127.5 (2) | C19—C18—C17 | 120.8 (3) |
O6—C6—C3 | 119.1 (2) | C19—C18—H18 | 119.6 |
N3—C7—O6 | 112.1 (2) | C17—C18—H18 | 119.6 |
N3—C7—C8 | 127.9 (2) | C18—C19—C14 | 120.2 (2) |
O6—C7—C8 | 120.0 (2) | C18—C19—H19 | 119.9 |
C12—C8—C9 | 118.4 (2) | C14—C19—H19 | 119.9 |
C12—C8—C7 | 122.7 (2) | O4—C20—O3 | 123.4 (2) |
C9—C8—C7 | 118.8 (2) | O4—C20—C16 | 123.4 (2) |
C10—C9—C8 | 119.0 (2) | O3—C20—C16 | 113.2 (2) |
C10—C9—H9 | 120.5 | O5—N1—C5 | 120.9 (2) |
C8—C9—H9 | 120.5 | O5—N1—C1 | 118.2 (2) |
N4—C10—C9 | 123.4 (2) | C5—N1—C1 | 120.9 (2) |
N4—C10—H10 | 118.3 | C6—N2—N3 | 105.6 (2) |
C9—C10—H10 | 118.3 | C7—N3—N2 | 106.81 (19) |
N4—C11—C12 | 123.7 (2) | C11—N4—C10 | 117.1 (2) |
N4—C11—H11 | 118.2 | C6—O6—C7 | 102.14 (18) |
C12—C11—H11 | 118.2 | ||
N1—C1—C2—C3 | 0.2 (4) | C14—C15—C16—C20 | 179.5 (2) |
C1—C2—C3—C4 | −0.2 (4) | C15—C16—C17—C18 | −0.7 (4) |
C1—C2—C3—C6 | 179.4 (2) | C20—C16—C17—C18 | 179.9 (2) |
C2—C3—C4—C5 | 0.1 (4) | C16—C17—C18—C19 | 0.4 (4) |
C6—C3—C4—C5 | −179.5 (2) | C17—C18—C19—C14 | 0.6 (4) |
C3—C4—C5—N1 | 0.0 (4) | C15—C14—C19—C18 | −1.2 (4) |
C4—C3—C6—N2 | 178.5 (3) | C13—C14—C19—C18 | 178.7 (2) |
C2—C3—C6—N2 | −1.1 (4) | C17—C16—C20—O4 | 3.7 (4) |
C4—C3—C6—O6 | −2.0 (4) | C15—C16—C20—O4 | −175.7 (3) |
C2—C3—C6—O6 | 178.4 (2) | C17—C16—C20—O3 | −176.5 (2) |
N3—C7—C8—C12 | 174.8 (2) | C15—C16—C20—O3 | 4.1 (4) |
O6—C7—C8—C12 | −4.2 (4) | C4—C5—N1—O5 | 178.7 (2) |
N3—C7—C8—C9 | −4.2 (4) | C4—C5—N1—C1 | 0.0 (4) |
O6—C7—C8—C9 | 176.9 (2) | C2—C1—N1—O5 | −178.8 (2) |
C12—C8—C9—C10 | −1.1 (4) | C2—C1—N1—C5 | 0.0 (4) |
C7—C8—C9—C10 | 177.9 (2) | O6—C6—N2—N3 | 0.5 (3) |
C8—C9—C10—N4 | 2.0 (4) | C3—C6—N2—N3 | −179.9 (2) |
C9—C8—C12—C11 | −0.3 (4) | O6—C7—N3—N2 | 0.4 (3) |
C7—C8—C12—C11 | −179.3 (2) | C8—C7—N3—N2 | −178.6 (2) |
N4—C11—C12—C8 | 1.2 (4) | C6—N2—N3—C7 | −0.5 (3) |
O2—C13—C14—C19 | 6.8 (4) | C12—C11—N4—C10 | −0.5 (4) |
O1—C13—C14—C19 | −173.4 (2) | C9—C10—N4—C11 | −1.1 (4) |
O2—C13—C14—C15 | −173.3 (3) | N2—C6—O6—C7 | −0.3 (3) |
O1—C13—C14—C15 | 6.5 (4) | C3—C6—O6—C7 | −179.9 (2) |
C19—C14—C15—C16 | 0.9 (4) | N3—C7—O6—C6 | 0.0 (3) |
C13—C14—C15—C16 | −179.0 (2) | C8—C7—O6—C6 | 179.0 (2) |
C14—C15—C16—C17 | 0.1 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N4 | 0.82 | 1.82 | 2.640 (2) | 171 |
O3—H3···O5i | 0.82 | 1.72 | 2.521 (3) | 163 |
Symmetry code: (i) x+1, y+1, z+1. |
Experimental details
Crystal data | |
Chemical formula | C12H8N4O2·C8H6O4 |
Mr | 406.35 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 298 |
a, b, c (Å) | 7.0993 (18), 7.1770 (19), 19.823 (5) |
α, β, γ (°) | 93.003 (4), 98.481 (3), 112.745 (4) |
V (Å3) | 914.6 (4) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.11 |
Crystal size (mm) | 0.30 × 0.15 × 0.06 |
Data collection | |
Diffractometer | Bruker SMART APEX diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4661, 3189, 1972 |
Rint | 0.027 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.052, 0.132, 0.98 |
No. of reflections | 3189 |
No. of parameters | 272 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.30, −0.15 |
Computer programs: SMART (Bruker 2000), SAINT (Bruker 2000), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N4 | 0.82 | 1.82 | 2.640 (2) | 171.0 |
O3—H3···O5i | 0.82 | 1.72 | 2.521 (3) | 163.4 |
Symmetry code: (i) x+1, y+1, z+1. |
Acknowledgements
The authors thank the National Natural Science Foundation of China (grant No. 20671060) and Shangdong Natural Science Foundation (grant Nos. J06D05 and 2006BS04040) for support.
References
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Rigid pyridyl compounds have been considered as good hydrogen bond acceptors. These compounds include 4,4-bipyridine (Lu et al., 1997; Kitagawa et al., 2004; Tan et al., 2006), 1,2-bis(4-pyridyl)ethyne (Beckmann & Jänicke, 2006), 4,4'-bipyridine-N,N'-dioxide (Long et al., 2004; Ma et al., 2005), and other similar molecules. We recently prepared the rigid bent compound, 2-(4-pyridyl)-5-(4-pyridyl N-oxide)-1,3,4-oxadiazole, (L2). It has a rigid 144° angle because of the bridging five-membered oxadiazole ring. In addition, isophthalic acid is a good hydrogen-bonding donor and its two carboxylic acid moieties make an angle of 120°. Supramolecular systems with novel architecture may result because of their specific geometry. Accordingly, when L2 reacted with isophthalic acid in a mixed CH2Cl2/CH3OH solution, yellow crystals formed and its structure is reported here.
The molecular structure of (1) is shown in Fig. 1. The asymmetric unit contains one L2 molecule and one isophthalic acid molecule. O···H—O and N···H—O hydrogen bonds (Fig. 3) are formed by the –COOH groups of the isophthalic acid and the pyridyl-N-oxide O atom and Npyridine atom, (Table 1). The dihedral angles between the benzene ring of isophthalic acid and pyridyl-N-oxide ring and pyridyl ring are 1.4° and 7.0°, respectively, which are similar to previously reported experimental values (Du et al., 2006; Tan et al., 2006). In addition to the specific geometry of the oxadiazole-containing rigid curved organic ligand L2, the molecules in (1) connect with each other generating one-dimensional extended zigzag chains, which have not been obtained using normal linear rigid bidentate organic ligands (Dong & Ma, 2003).
In the solid state, the crystal packing view of (1) shows a pair of zigzag chains which stack via aromatic π-π interactions (Fig. 3). The face-to-face distance between the pyridine-N-oxide ring and benzene ring from isophthalic acid is 3.7 Å. The shortest close contact is 3.447 (6) Å. Although these values are typical for aromatic π-π stacking interactions, compared with the strong π-π interactions (Hunter, 1994) they are comparatively weak. Two adjacent chains are further linked via intramolecular π-π stacking interactions to construct a one-dimensional supramolecular curved tape (Fig. 3). These weak intramolecular π-π interactions and crucial hydrogen bonds enhance the stability of the compound (1).