organic compounds
(S)-N-(1-Hydroxymethyl-2-methylpropyl)-2-methoxybenzamide
aKey Laboratory of Green Chemistry and Technology of the Ministry of Education, College of Chemistry, Sichuan University, Chengdu 610064, People's Republic of China
*Correspondence e-mail: jingbolan@scu.edu.cn
The title compound, C13H19NO3, is an important synthetic intermediate. Weak O—H⋯O and N—H⋯O hydrogen bonds enhance the stability of the crystal structure.
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: DIFRAC (Gabe & White, 1993); cell DIFRAC; data reduction: NRCVAX (Gabe et al., 1989); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPIII (Burnett & Johnson, 1996); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S160053680801009X/er2052sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053680801009X/er2052Isup2.hkl
NaH (8.7 g, 60%, 0.216 mol) was added portionwise to a stirred solution of L-valinol (22.1 g, 0.215 mol) in dry THF (120 ml). The mixture was stirred at ambient temperature for 1 h. To this solution was added 2-Methoxy-benzoic acid methyl ester (17.8 g, 0.107 mol) dissolved in THF (50 ml). The mixture was refluxed for 12 h under nitrogen, quenched with H2O (10 ml) and concentrated by evaporation of the solvent. The residue was dissolved in CH2Cl2 (100 ml), washed with H2O, brine, and dried over MgSO4. And then removal of the solvent in vacuo gave a white solid, which was recrystallized from ethyl acetate and petroleum ether to afford the title compound as white crystals (22.8 g, 90%).
H atoms were positioned geometrically and refined in the riding model approximation with O—H = 0.82 Å, N—H = 0.86 Å, and C—H = 0.93, 0.96, 0.97 or 0.98 Å. The Uiso(H) = 1.5 Ueq(C) for the CH3 while it was set to 1.2 Ueq(C,N,O) for all other H atoms. Due to abscence of significant
effects, the reflection data were merged.Data collection: DIFRAC (Gabe & White, 1993); cell
DIFRAC (Gabe & White, 1993); data reduction: NRCVAX (Gabe et al., 1989); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPIII (Burnett & Johnson, 1996); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).Fig. 1. The molecular structure of (I), showing 30% probability displacement ellipsoids and the atomic numbering. |
C13H19NO3 | F(000) = 512 |
Mr = 237.29 | Dx = 1.202 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 25 reflections |
a = 9.015 (4) Å | θ = 4.5–6.7° |
b = 10.386 (4) Å | µ = 0.09 mm−1 |
c = 14.005 (4) Å | T = 291 K |
V = 1311.3 (9) Å3 | Block, colourless |
Z = 4 | 0.50 × 0.44 × 0.40 mm |
Enraf–Nonius CAD-4 diffractometer | Rint = 0.010 |
Radiation source: fine-focus sealed tube | θmax = 25.5°, θmin = 2.4° |
Graphite monochromator | h = −3→10 |
ω/2θ scans | k = −3→12 |
1457 measured reflections | l = −5→16 |
1397 independent reflections | 3 standard reflections every 120 reflections |
848 reflections with I > 2σ(I) | intensity decay: 0.4% |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.045 | H-atom parameters constrained |
wR(F2) = 0.136 | w = 1/[σ2(Fo2) + (0.0778P)2 + 0.0096P] where P = (Fo2 + 2Fc2)/3 |
S = 1.02 | (Δ/σ)max < 0.001 |
1397 reflections | Δρmax = 0.21 e Å−3 |
164 parameters | Δρmin = −0.14 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.069 (8) |
C13H19NO3 | V = 1311.3 (9) Å3 |
Mr = 237.29 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 9.015 (4) Å | µ = 0.09 mm−1 |
b = 10.386 (4) Å | T = 291 K |
c = 14.005 (4) Å | 0.50 × 0.44 × 0.40 mm |
Enraf–Nonius CAD-4 diffractometer | Rint = 0.010 |
1457 measured reflections | 3 standard reflections every 120 reflections |
1397 independent reflections | intensity decay: 0.4% |
848 reflections with I > 2σ(I) |
R[F2 > 2σ(F2)] = 0.045 | 0 restraints |
wR(F2) = 0.136 | H-atom parameters constrained |
S = 1.02 | Δρmax = 0.21 e Å−3 |
1397 reflections | Δρmin = −0.14 e Å−3 |
164 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.1432 (3) | 0.3872 (3) | 0.16126 (19) | 0.0666 (8) | |
O2 | 0.5192 (3) | 0.3286 (3) | −0.00264 (18) | 0.0703 (8) | |
O3 | 0.2632 (4) | 0.0046 (3) | −0.0111 (2) | 0.0810 (10) | |
H3 | 0.1945 | 0.0562 | −0.0140 | 0.097* | |
N1 | 0.3536 (3) | 0.2340 (2) | 0.0926 (2) | 0.0487 (8) | |
H1N1 | 0.2711 | 0.2433 | 0.1227 | 0.058* | |
C1 | 0.1842 (4) | 0.4786 (3) | 0.0963 (3) | 0.0514 (9) | |
C2 | 0.1074 (5) | 0.5935 (4) | 0.0851 (3) | 0.0709 (12) | |
H2 | 0.0240 | 0.6099 | 0.1223 | 0.085* | |
C3 | 0.1535 (6) | 0.6826 (4) | 0.0201 (4) | 0.0878 (16) | |
H3A | 0.1009 | 0.7591 | 0.0133 | 0.105* | |
C4 | 0.2760 (6) | 0.6610 (4) | −0.0355 (4) | 0.0929 (18) | |
H4 | 0.3078 | 0.7226 | −0.0791 | 0.112* | |
C5 | 0.3519 (5) | 0.5457 (4) | −0.0255 (3) | 0.0745 (13) | |
H5 | 0.4337 | 0.5300 | −0.0642 | 0.089* | |
C6 | 0.3096 (4) | 0.4533 (3) | 0.0402 (3) | 0.0489 (9) | |
C7 | 0.0018 (6) | 0.3961 (7) | 0.2048 (3) | 0.109 (2) | |
H7A | −0.0038 | 0.4739 | 0.2416 | 0.163* | |
H7B | −0.0130 | 0.3233 | 0.2460 | 0.163* | |
H7C | −0.0735 | 0.3970 | 0.1564 | 0.163* | |
C8 | 0.4020 (4) | 0.3328 (3) | 0.0425 (2) | 0.0459 (9) | |
C9 | 0.4288 (4) | 0.1097 (3) | 0.1012 (2) | 0.0456 (8) | |
H9 | 0.5050 | 0.1060 | 0.0514 | 0.055* | |
C10 | 0.3202 (5) | 0.0025 (3) | 0.0824 (3) | 0.0609 (10) | |
H10A | 0.3691 | −0.0794 | 0.0932 | 0.073* | |
H10B | 0.2387 | 0.0091 | 0.1273 | 0.073* | |
C11 | 0.5075 (5) | 0.0978 (4) | 0.1981 (3) | 0.0632 (11) | |
H11 | 0.5515 | 0.0115 | 0.2002 | 0.076* | |
C12 | 0.6339 (6) | 0.1925 (5) | 0.2074 (4) | 0.0939 (16) | |
H12A | 0.5957 | 0.2787 | 0.2045 | 0.141* | |
H12B | 0.7031 | 0.1794 | 0.1562 | 0.141* | |
H12C | 0.6832 | 0.1796 | 0.2674 | 0.141* | |
C13 | 0.4068 (6) | 0.1084 (6) | 0.2833 (3) | 0.107 (2) | |
H13A | 0.4630 | 0.0946 | 0.3406 | 0.160* | |
H13B | 0.3299 | 0.0447 | 0.2788 | 0.160* | |
H13C | 0.3631 | 0.1926 | 0.2849 | 0.160* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0560 (16) | 0.0735 (18) | 0.0704 (16) | 0.0177 (16) | 0.0102 (13) | 0.0020 (15) |
O2 | 0.0553 (16) | 0.0652 (18) | 0.0903 (18) | −0.0022 (15) | 0.0249 (16) | 0.0137 (16) |
O3 | 0.072 (2) | 0.071 (2) | 0.099 (2) | 0.0007 (16) | −0.0180 (18) | −0.0113 (17) |
N1 | 0.0369 (15) | 0.0481 (16) | 0.0610 (17) | 0.0057 (15) | 0.0078 (14) | 0.0039 (14) |
C1 | 0.050 (2) | 0.046 (2) | 0.058 (2) | −0.0001 (18) | −0.0117 (19) | −0.0054 (18) |
C2 | 0.064 (3) | 0.060 (3) | 0.089 (3) | 0.015 (2) | −0.016 (2) | −0.019 (2) |
C3 | 0.070 (3) | 0.048 (2) | 0.146 (4) | 0.002 (2) | −0.043 (3) | 0.008 (3) |
C4 | 0.067 (3) | 0.059 (3) | 0.152 (5) | −0.011 (3) | −0.030 (3) | 0.047 (3) |
C5 | 0.053 (2) | 0.066 (2) | 0.104 (3) | −0.010 (2) | −0.011 (2) | 0.031 (3) |
C6 | 0.044 (2) | 0.0442 (18) | 0.059 (2) | −0.0051 (17) | −0.0149 (17) | 0.0013 (17) |
C7 | 0.077 (3) | 0.156 (6) | 0.094 (3) | 0.036 (4) | 0.030 (3) | 0.020 (4) |
C8 | 0.037 (2) | 0.046 (2) | 0.054 (2) | −0.0041 (17) | −0.0023 (16) | 0.0044 (18) |
C9 | 0.0387 (18) | 0.0447 (19) | 0.0534 (19) | 0.0069 (17) | 0.0040 (15) | −0.0004 (17) |
C10 | 0.053 (2) | 0.050 (2) | 0.080 (3) | 0.0044 (19) | 0.000 (2) | 0.004 (2) |
C11 | 0.062 (3) | 0.061 (3) | 0.067 (2) | 0.016 (2) | −0.009 (2) | 0.011 (2) |
C12 | 0.096 (3) | 0.093 (3) | 0.093 (3) | 0.000 (3) | −0.037 (3) | −0.011 (3) |
C13 | 0.120 (4) | 0.146 (5) | 0.054 (2) | 0.031 (5) | 0.004 (3) | 0.016 (3) |
O1—C1 | 1.365 (4) | C6—C8 | 1.504 (5) |
O1—C7 | 1.416 (5) | C7—H7A | 0.9600 |
O2—C8 | 1.232 (4) | C7—H7B | 0.9600 |
O3—C10 | 1.406 (5) | C7—H7C | 0.9600 |
O3—H3 | 0.8200 | C9—C10 | 1.506 (5) |
N1—C8 | 1.318 (4) | C9—C11 | 1.537 (5) |
N1—C9 | 1.463 (4) | C9—H9 | 0.9800 |
N1—H1N1 | 0.8600 | C10—H10A | 0.9700 |
C1—C2 | 1.389 (5) | C10—H10B | 0.9700 |
C1—C6 | 1.402 (5) | C11—C13 | 1.503 (6) |
C2—C3 | 1.363 (6) | C11—C12 | 1.511 (6) |
C2—H2 | 0.9300 | C11—H11 | 0.9800 |
C3—C4 | 1.369 (7) | C12—H12A | 0.9600 |
C3—H3A | 0.9300 | C12—H12B | 0.9600 |
C4—C5 | 1.386 (6) | C12—H12C | 0.9600 |
C4—H4 | 0.9300 | C13—H13A | 0.9600 |
C5—C6 | 1.383 (5) | C13—H13B | 0.9600 |
C5—H5 | 0.9300 | C13—H13C | 0.9600 |
C1—O1—C7 | 119.1 (4) | N1—C8—C6 | 118.4 (3) |
C10—O3—H3 | 109.5 | N1—C9—C10 | 109.7 (3) |
C8—N1—C9 | 125.3 (3) | N1—C9—C11 | 111.0 (3) |
C8—N1—H1N1 | 117.4 | C10—C9—C11 | 113.3 (3) |
C9—N1—H1N1 | 117.4 | N1—C9—H9 | 107.5 |
O1—C1—C2 | 122.5 (4) | C10—C9—H9 | 107.5 |
O1—C1—C6 | 117.5 (3) | C11—C9—H9 | 107.5 |
C2—C1—C6 | 120.0 (4) | O3—C10—C9 | 112.9 (3) |
C3—C2—C1 | 120.4 (4) | O3—C10—H10A | 109.0 |
C3—C2—H2 | 119.8 | C9—C10—H10A | 109.0 |
C1—C2—H2 | 119.8 | O3—C10—H10B | 109.0 |
C2—C3—C4 | 121.0 (4) | C9—C10—H10B | 109.0 |
C2—C3—H3A | 119.5 | H10A—C10—H10B | 107.8 |
C4—C3—H3A | 119.5 | C13—C11—C12 | 109.8 (4) |
C3—C4—C5 | 118.8 (4) | C13—C11—C9 | 114.6 (3) |
C3—C4—H4 | 120.6 | C12—C11—C9 | 111.8 (3) |
C5—C4—H4 | 120.6 | C13—C11—H11 | 106.7 |
C6—C5—C4 | 122.0 (5) | C12—C11—H11 | 106.7 |
C6—C5—H5 | 119.0 | C9—C11—H11 | 106.7 |
C4—C5—H5 | 119.0 | C11—C12—H12A | 109.5 |
C5—C6—C1 | 117.7 (4) | C11—C12—H12B | 109.5 |
C5—C6—C8 | 116.0 (3) | H12A—C12—H12B | 109.5 |
C1—C6—C8 | 126.2 (3) | C11—C12—H12C | 109.5 |
O1—C7—H7A | 109.5 | H12A—C12—H12C | 109.5 |
O1—C7—H7B | 109.5 | H12B—C12—H12C | 109.5 |
H7A—C7—H7B | 109.5 | C11—C13—H13A | 109.5 |
O1—C7—H7C | 109.5 | C11—C13—H13B | 109.5 |
H7A—C7—H7C | 109.5 | H13A—C13—H13B | 109.5 |
H7B—C7—H7C | 109.5 | C11—C13—H13C | 109.5 |
O2—C8—N1 | 122.0 (3) | H13A—C13—H13C | 109.5 |
O2—C8—C6 | 119.6 (3) | H13B—C13—H13C | 109.5 |
C7—O1—C1—C2 | 13.4 (5) | C9—N1—C8—C6 | 179.2 (3) |
C7—O1—C1—C6 | −167.0 (4) | C5—C6—C8—O2 | 9.9 (5) |
O1—C1—C2—C3 | 179.3 (3) | C1—C6—C8—O2 | −171.7 (3) |
C6—C1—C2—C3 | −0.3 (6) | C5—C6—C8—N1 | −169.6 (3) |
C1—C2—C3—C4 | −0.0 (6) | C1—C6—C8—N1 | 8.8 (5) |
C2—C3—C4—C5 | 0.9 (7) | C8—N1—C9—C10 | −130.9 (4) |
C3—C4—C5—C6 | −1.5 (7) | C8—N1—C9—C11 | 103.2 (4) |
C4—C5—C6—C1 | 1.2 (6) | N1—C9—C10—O3 | 63.2 (4) |
C4—C5—C6—C8 | 179.7 (4) | C11—C9—C10—O3 | −172.2 (3) |
O1—C1—C6—C5 | −179.8 (3) | N1—C9—C11—C13 | 59.7 (4) |
C2—C1—C6—C5 | −0.2 (5) | C10—C9—C11—C13 | −64.2 (5) |
O1—C1—C6—C8 | 1.8 (5) | N1—C9—C11—C12 | −66.1 (4) |
C2—C1—C6—C8 | −178.6 (3) | C10—C9—C11—C12 | 170.0 (3) |
C9—N1—C8—O2 | −0.3 (5) |
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3···O2i | 0.82 | 2.00 | 2.806 (4) | 170 |
N1—H1N1···O1 | 0.86 | 1.96 | 2.656 (4) | 137 |
Symmetry code: (i) x−1/2, −y+1/2, −z. |
Experimental details
Crystal data | |
Chemical formula | C13H19NO3 |
Mr | 237.29 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 291 |
a, b, c (Å) | 9.015 (4), 10.386 (4), 14.005 (4) |
V (Å3) | 1311.3 (9) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.50 × 0.44 × 0.40 |
Data collection | |
Diffractometer | Enraf–Nonius CAD-4 diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 1457, 1397, 848 |
Rint | 0.010 |
(sin θ/λ)max (Å−1) | 0.606 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.045, 0.136, 1.02 |
No. of reflections | 1397 |
No. of parameters | 164 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.21, −0.14 |
Computer programs: DIFRAC (Gabe & White, 1993), NRCVAX (Gabe et al., 1989), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEPIII (Burnett & Johnson, 1996).
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3···O2i | 0.82 | 2.00 | 2.806 (4) | 169.7 |
N1—H1N1···O1 | 0.86 | 1.96 | 2.656 (4) | 136.7 |
Symmetry code: (i) x−1/2, −y+1/2, −z. |
References
Burnett, M. N. & Johnson, C. K. (1996). ORTEPIII. Report ORNL-6895. Oak Ridge National Laboratory, Tennessee, USA. Google Scholar
Gabe, E. J., Le Page, Y., Charland, J.-P., Lee, F. L. & White, P. S. (1989). J. Appl. Cryst. 22, 384–387. CrossRef CAS Web of Science IUCr Journals Google Scholar
Gabe, E. J. & White, P. S. (1993). DIFRAC. American Crystallographic Association, Pittsburgh Meeting. Abstract PA104. Google Scholar
Ma, K. & You, J. (2007). Chem. Eur. J. 13, 1863–1871. Web of Science CrossRef PubMed CAS Google Scholar
Rechavi, D. & Lemaire, M. (2002). Chem. Rev. 102, 3467–3494. Web of Science CrossRef PubMed CAS Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
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Oxazoline ligands have been proved to be a class of chiral ligands, being capable of forming a broad variety of metal complexes that are capable of catalyzing a great number of reactions with excellent enantioselectivity (Rechavi & Lemaire, 2002). It is believed that the oxazoline ring can be modified structurally by replacing the O atom with a substituted N atom, leading to new types of imidazoline ligands (Ma & You, 2007). However, all those ligands can prepared by this compound as an intermediate. Herein, we report the synthesis and structure of the title compound (I).
As shown in Fig. 1, there is a chiral center at C9 derived from L-valinol. The C—N bond lengths are 1.318 (4) Å and 1.463 (4) Å, and the C8—N1—C9 angle is 125.3 (3) °. A combination of O—H···O and N—H···O hydrogen bonds interactions provide packing forces in the crystal structure of the title compound.