organic compounds
N,N-Dimethyl-N′-[3-(trifluoromethyl)phenyl]urea
aDepartment of Applied Chemistry, College of Science, Nanjing University of Technolgy, Xinmofan Road No.5 Nanjing, Nanjing 210009, People's Republic of China
*Correspondence e-mail: fangshi.li@njut.edu.cn
The title compound, C10H11F3N2O, is an important urea-based herbicide. In the the molecular packing is stabilized by two intramolecular C—H⋯O hydrogen bonds and one intermolecular N—H⋯O hydrogen bond, generating a C(4) graph-set motif running parallel to the [001] direction. The F atoms are disordered over two sites, with occupancies of 0.176 (9) and 0.824 (9).
Related literature
For related literature, see: Bernstein et al. (1995); Xu et al. (2005); Zhao & Wilkins (2003); Li et al. (2007).
Experimental
Crystal data
|
Refinement
|
Data collection: CAD-4 Software (Enraf–Nonius, 1989); cell CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536808016656/bx2148sup1.cif
contains datablock I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808016656/bx2148Isup2.hkl
The title compound, (I), was prepared according to the literature method (Xu et al., 2005). The crystals suitable for X-ray analysis were obtained by dissolving (I) (0.1 g, in acetonitrile (25 ml) and evaporating the solvent slowly at room temperature for about 7 d.
H atoms were positioned geometrically, C—H = 0.86, 0.93 and 0.96 Å for amido, aromatic and methyl H, and constrained to ride on their parent atoms, with Uiso(H) = xUeq(C,N), where x = 1.5 for methyl H, and x = 1.2 for all other H atoms.
Trifloromethyl group was disordered over two sites, occupancies were refined and converged to 0.176 (9) and 0.824 (9), respectively.
Data collection: CAD-4 Software (Enraf–Nonius, 1989); cell
CAD-4 Software (Enraf–Nonius, 1989); data reduction: XCAD4 (Harms & Wocadlo, 1995); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure of (I), with the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. | |
Fig. 2. The molecule packing diagram. |
C10H11F3N2O | F(000) = 480 |
Mr = 232.20 | Dx = 1.411 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 25 reflections |
a = 11.005 (2) Å | θ = 10–13° |
b = 9.991 (2) Å | µ = 0.13 mm−1 |
c = 10.012 (2) Å | T = 298 K |
β = 96.89 (3)° | Needle, colourless |
V = 1092.9 (4) Å3 | 0.30 × 0.20 × 0.10 mm |
Z = 4 |
Enraf–Nonius CAD4 diffractometer | 1335 reflections with I > 2σi(I) |
Radiation source: fine-focus sealed tube | Rint = 0.020 |
Graphite monochromator | θmax = 25.2°, θmin = 1.9° |
ω/2θ scans | h = −13→13 |
Absorption correction: multi-scan (North et al., 1968) | k = −11→0 |
Tmin = 0.963, Tmax = 0.987 | l = 0→11 |
2076 measured reflections | 3 standard reflections every 200 reflections |
1953 independent reflections | intensity decay: none |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.053 | H-atom parameters constrained |
wR(F2) = 0.137 | w = 1/[σ2(Fo2) + (0.050P)2 + 0.630P] where P = (Fo2 + 2Fc2)/3 |
S = 1.00 | (Δ/σ)max < 0.001 |
1953 reflections | Δρmax = 0.19 e Å−3 |
169 parameters | Δρmin = −0.15 e Å−3 |
36 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.162 (9) |
C10H11F3N2O | V = 1092.9 (4) Å3 |
Mr = 232.20 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 11.005 (2) Å | µ = 0.13 mm−1 |
b = 9.991 (2) Å | T = 298 K |
c = 10.012 (2) Å | 0.30 × 0.20 × 0.10 mm |
β = 96.89 (3)° |
Enraf–Nonius CAD4 diffractometer | 1335 reflections with I > 2σi(I) |
Absorption correction: multi-scan (North et al., 1968) | Rint = 0.020 |
Tmin = 0.963, Tmax = 0.987 | 3 standard reflections every 200 reflections |
2076 measured reflections | intensity decay: none |
1953 independent reflections |
R[F2 > 2σ(F2)] = 0.053 | 36 restraints |
wR(F2) = 0.137 | H-atom parameters constrained |
S = 1.00 | Δρmax = 0.19 e Å−3 |
1953 reflections | Δρmin = −0.15 e Å−3 |
169 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
C1 | −0.4416 (3) | 0.3310 (5) | 0.7481 (4) | 0.083 | |
F1 | −0.4245 (19) | 0.355 (3) | 0.6336 (15) | 0.097 (6) | 0.176 (9) |
F2 | −0.444 (2) | 0.1924 (18) | 0.754 (3) | 0.127 (8) | 0.176 (9) |
F3 | −0.5413 (13) | 0.368 (3) | 0.773 (2) | 0.102 (6) | 0.176 (9) |
F1' | −0.4988 (5) | 0.4328 (5) | 0.6794 (6) | 0.149 (2) | 0.824 (9) |
F2' | −0.4081 (3) | 0.2491 (7) | 0.6573 (5) | 0.126 (2) | 0.824 (9) |
F3' | −0.5304 (4) | 0.2692 (7) | 0.8022 (4) | 0.1244 (19) | 0.824 (9) |
O | −0.00769 (19) | 0.2044 (2) | 0.79738 (17) | 0.0702 (7) | |
N1 | −0.0375 (2) | 0.2618 (2) | 1.0096 (2) | 0.0532 (7) | |
H1A | −0.0106 | 0.2548 | 1.0935 | 0.064* | |
N2 | 0.1237 (2) | 0.1254 (3) | 0.9701 (2) | 0.0569 (7) | |
C2 | −0.3406 (3) | 0.3766 (3) | 0.8510 (3) | 0.0553 (8) | |
C3 | −0.2362 (2) | 0.2993 (3) | 0.8761 (3) | 0.0508 (7) | |
H3A | −0.2280 | 0.2211 | 0.8277 | 0.061* | |
C4 | −0.1437 (2) | 0.3397 (3) | 0.9745 (2) | 0.0460 (7) | |
C5 | −0.1575 (3) | 0.4563 (3) | 1.0448 (3) | 0.0572 (8) | |
H5A | −0.0954 | 0.4840 | 1.1102 | 0.069* | |
C6 | −0.2618 (3) | 0.5322 (3) | 1.0194 (3) | 0.0649 (9) | |
H6A | −0.2703 | 0.6103 | 1.0680 | 0.078* | |
C7 | −0.3543 (3) | 0.4927 (3) | 0.9216 (3) | 0.0627 (9) | |
H7A | −0.4249 | 0.5439 | 0.9037 | 0.075* | |
C8 | 0.0253 (2) | 0.1970 (3) | 0.9195 (2) | 0.0492 (7) | |
C9 | 0.1950 (3) | 0.0560 (4) | 0.8790 (3) | 0.0814 (11) | |
H9A | 0.1592 | 0.0706 | 0.7879 | 0.122* | |
H9B | 0.1957 | −0.0381 | 0.8983 | 0.122* | |
H9C | 0.2773 | 0.0896 | 0.8903 | 0.122* | |
C10 | 0.1652 (3) | 0.1137 (4) | 1.1124 (3) | 0.0765 (11) | |
H10A | 0.0972 | 0.0913 | 1.1599 | 0.115* | |
H10B | 0.1997 | 0.1974 | 1.1454 | 0.115* | |
H10C | 0.2262 | 0.0448 | 1.1264 | 0.115* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.059 | 0.100 | 0.086 | −0.002 | −0.002 | −0.005 |
F1 | 0.102 (10) | 0.117 (11) | 0.066 (7) | −0.013 (8) | −0.012 (6) | −0.014 (7) |
F2 | 0.118 (11) | 0.114 (10) | 0.134 (12) | −0.017 (8) | −0.041 (8) | −0.013 (8) |
F3 | 0.052 (7) | 0.134 (11) | 0.115 (10) | −0.004 (8) | −0.004 (6) | −0.016 (9) |
F1' | 0.135 (4) | 0.122 (3) | 0.162 (4) | 0.004 (3) | −0.093 (3) | 0.022 (3) |
F2' | 0.073 (2) | 0.192 (5) | 0.105 (3) | 0.005 (3) | −0.0191 (18) | −0.077 (4) |
F3' | 0.081 (2) | 0.153 (4) | 0.140 (3) | −0.058 (3) | 0.014 (2) | −0.016 (3) |
O | 0.0692 (13) | 0.1123 (19) | 0.0284 (10) | 0.0120 (12) | 0.0031 (9) | −0.0004 (10) |
N1 | 0.0590 (14) | 0.0718 (16) | 0.0269 (10) | 0.0113 (13) | −0.0028 (10) | −0.0003 (11) |
N2 | 0.0562 (14) | 0.0701 (17) | 0.0433 (13) | 0.0112 (13) | 0.0017 (11) | −0.0004 (12) |
C2 | 0.0476 (16) | 0.067 (2) | 0.0508 (16) | −0.0061 (15) | 0.0040 (13) | 0.0053 (15) |
C3 | 0.0542 (17) | 0.0543 (17) | 0.0430 (15) | −0.0044 (14) | 0.0027 (12) | −0.0013 (13) |
C4 | 0.0501 (15) | 0.0563 (17) | 0.0312 (12) | 0.0004 (13) | 0.0040 (11) | 0.0034 (12) |
C5 | 0.0628 (18) | 0.066 (2) | 0.0417 (15) | −0.0010 (16) | 0.0002 (13) | −0.0058 (14) |
C6 | 0.074 (2) | 0.063 (2) | 0.0579 (18) | 0.0033 (17) | 0.0088 (16) | −0.0090 (15) |
C7 | 0.0570 (18) | 0.068 (2) | 0.0637 (19) | 0.0106 (16) | 0.0093 (15) | 0.0088 (17) |
C8 | 0.0505 (16) | 0.0645 (18) | 0.0323 (14) | −0.0022 (14) | 0.0039 (11) | 0.0020 (12) |
C9 | 0.078 (2) | 0.098 (3) | 0.071 (2) | 0.022 (2) | 0.0198 (18) | −0.004 (2) |
C10 | 0.079 (2) | 0.095 (3) | 0.0517 (18) | 0.023 (2) | −0.0079 (16) | 0.0085 (18) |
C1—F1 | 1.208 (16) | C2—C3 | 1.382 (4) |
C1—F3 | 1.214 (15) | C3—C4 | 1.389 (4) |
C1—F2' | 1.308 (5) | C3—H3A | 0.9300 |
C1—F3' | 1.325 (6) | C4—C5 | 1.380 (4) |
C1—F1' | 1.341 (6) | C5—C6 | 1.374 (4) |
C1—F2 | 1.386 (18) | C5—H5A | 0.9300 |
C1—C2 | 1.494 (5) | C6—C7 | 1.383 (4) |
O—C8 | 1.235 (3) | C6—H6A | 0.9300 |
N1—C8 | 1.364 (3) | C7—H7A | 0.9300 |
N1—C4 | 1.412 (3) | C9—H9A | 0.9600 |
N1—H1A | 0.8600 | C9—H9B | 0.9600 |
N2—C8 | 1.345 (3) | C9—H9C | 0.9600 |
N2—C10 | 1.448 (4) | C10—H10A | 0.9600 |
N2—C9 | 1.449 (4) | C10—H10B | 0.9600 |
C2—C7 | 1.376 (4) | C10—H10C | 0.9600 |
F1—C1—F3 | 112.7 (14) | C2—C3—C4 | 119.3 (3) |
F1—C1—F2' | 51.4 (11) | C2—C3—H3A | 120.3 |
F3—C1—F2' | 132.5 (9) | C4—C3—H3A | 120.3 |
F1—C1—F3' | 133.4 (8) | C5—C4—C3 | 119.4 (3) |
F3—C1—F3' | 47.9 (13) | C5—C4—N1 | 118.5 (2) |
F2'—C1—F3' | 106.1 (5) | C3—C4—N1 | 122.1 (2) |
F1—C1—F1' | 58.6 (12) | C6—C5—C4 | 120.8 (3) |
F3—C1—F1' | 59.6 (12) | C6—C5—H5A | 119.6 |
F2'—C1—F1' | 105.8 (5) | C4—C5—H5A | 119.6 |
F3'—C1—F1' | 103.9 (4) | C5—C6—C7 | 120.1 (3) |
F1—C1—F2 | 104.2 (15) | C5—C6—H6A | 120.0 |
F3—C1—F2 | 106.2 (16) | C7—C6—H6A | 120.0 |
F2'—C1—F2 | 54.1 (12) | C2—C7—C6 | 119.2 (3) |
F3'—C1—F2 | 60.0 (12) | C2—C7—H7A | 120.4 |
F1'—C1—F2 | 140.5 (8) | C6—C7—H7A | 120.4 |
F1—C1—C2 | 113.9 (8) | O—C8—N2 | 122.2 (3) |
F3—C1—C2 | 112.2 (9) | O—C8—N1 | 120.9 (3) |
F2'—C1—C2 | 114.9 (3) | N2—C8—N1 | 116.9 (2) |
F3'—C1—C2 | 112.6 (4) | N2—C9—H9A | 109.5 |
F1'—C1—C2 | 112.7 (4) | N2—C9—H9B | 109.5 |
F2—C1—C2 | 106.8 (8) | H9A—C9—H9B | 109.5 |
C8—N1—C4 | 124.5 (2) | N2—C9—H9C | 109.5 |
C8—N1—H1A | 117.7 | H9A—C9—H9C | 109.5 |
C4—N1—H1A | 117.7 | H9B—C9—H9C | 109.5 |
C8—N2—C10 | 123.9 (2) | N2—C10—H10A | 109.5 |
C8—N2—C9 | 119.3 (2) | N2—C10—H10B | 109.5 |
C10—N2—C9 | 116.8 (3) | H10A—C10—H10B | 109.5 |
C7—C2—C3 | 121.2 (3) | N2—C10—H10C | 109.5 |
C7—C2—C1 | 119.6 (3) | H10A—C10—H10C | 109.5 |
C3—C2—C1 | 119.3 (3) | H10B—C10—H10C | 109.5 |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···Oi | 0.86 | 2.08 | 2.880 (3) | 155 |
C3—H3A···O | 0.93 | 2.48 | 2.884 (3) | 106 |
C9—H9A···O | 0.96 | 2.28 | 2.721 (4) | 107 |
Symmetry code: (i) x, −y+1/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C10H11F3N2O |
Mr | 232.20 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 298 |
a, b, c (Å) | 11.005 (2), 9.991 (2), 10.012 (2) |
β (°) | 96.89 (3) |
V (Å3) | 1092.9 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.13 |
Crystal size (mm) | 0.30 × 0.20 × 0.10 |
Data collection | |
Diffractometer | Enraf–Nonius CAD4 diffractometer |
Absorption correction | Multi-scan (North et al., 1968) |
Tmin, Tmax | 0.963, 0.987 |
No. of measured, independent and observed [I > 2σi(I)] reflections | 2076, 1953, 1335 |
Rint | 0.020 |
(sin θ/λ)max (Å−1) | 0.598 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.053, 0.137, 1.00 |
No. of reflections | 1953 |
No. of parameters | 169 |
No. of restraints | 36 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.19, −0.15 |
Computer programs: CAD-4 Software (Enraf–Nonius, 1989), XCAD4 (Harms & Wocadlo, 1995), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···Oi | 0.8600 | 2.0800 | 2.880 (3) | 155.00 |
C3—H3A···O | 0.9300 | 2.4800 | 2.884 (3) | 106.00 |
C9—H9A···O | 0.9600 | 2.2800 | 2.721 (4) | 107.00 |
Symmetry code: (i) x, −y+1/2, z+1/2. |
References
Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573. CrossRef CAS Web of Science Google Scholar
Enraf–Nonius (1989). CAD-4 Software. Enraf–Nonius, Delft, The Netherlands. Google Scholar
Harms, K. & Wocadlo, S. (1995). XCAD4. University of Marburg, Germany. Google Scholar
Li, F. S., Sun, F., Liu, X. J. & Cui, H. H. (2007). Agric. Sci. China, 6, 964–969. CrossRef CAS Google Scholar
North, A. C. T., Phillips, D. C. & Mathews, F. S. (1968). Acta Cryst. A24, 351–359. CrossRef IUCr Journals Web of Science Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Xu, X. S., Du, X. H., Hu, Z. Y. & Xu, Z. Y. (2005). Nongyao, 44, 210–211. CAS Google Scholar
Zhao, J. & Wilkins, R. M. (2003). J. Agric. Food Chem. 51, 4023–4028. Web of Science CrossRef PubMed CAS Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The title compound, (I), is a pre- and postemergence herbicide used widely as water dispersible and suspension concentrate formulations for the control of grass and broadleaf weeds in cotton and sugarcane (Zhao & Wilkins, 2003). As part of our studies in this area (Li et al., 2007), we report herein the crystal structure of the title compound, (I), Fig 1. In the crystal structure the molecular packing is stabilized by two intramolecular C—H···O as well as one intermolecular N—H···O hydrogen bond generating a graph-set motif C(4) running parallel to [001] direction (Bernstein et al., 1995), Table 1.