organic compounds
Unusual hemiacetal structure derived from Salvinorin A
aDepartment of Medicinal Chemistry, University of Mississippi, 417 Faser Hall, University, MS 38677, USA, bDepartment of Pharmacognosy, University of Mississippi, PO Box 1848, 443 Faser Hall, University, MS, 38677-1848, USA, cNational Center for Natural Products Research, Research Institute of Pharmaceutical Sciences, School of Pharmacy, University of Mississippi, University, MS 38677, USA, and dDepartment of Chemistry and Biochemistry, University of Mississippi, University, MS 38677, USA
*Correspondence e-mail: mavery@olemiss.edu
The salvinorin A analog dimethyl (2R,3aR,4R,6aR,7R,9S,9aS,9bS)-2-(3-furyl)-9,9a-dihydroxy-3a,6a-dimethyldodecahydrobenzo[de]chromene-4,7-dicarboxylate, C22H30O8, has a relatively simple spatial arrangement in which molecules are linked into layers by two pairs of O—H⋯O hydrogen bonds. Each molecule has as the central feature a dodecahydro-1H-phenalene ring system. Its three six-membered rings are in the chair conformation, with two axial methyl groups, one axial OH, and one equatorial OH, these OH groups being directly responsible for linking of the molecules in the crystal structure.
Related literature
For the synthesis of analogs of salvinorin A, see: Bikbulatov et al. (2007); Lee et al. (2006); Beguin et al. (2006); Stewart et al. (2006) and references cited therein. For modifications of salvinorin A with changed pharmacological profile, see: Rothman et al. (2007); Groer et al. (2007); Tidgewell et al. (2006); Harding et al. (2005, 2006).
Experimental
Crystal data
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Data collection
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Data collection: SMART (Bruker, 2003); cell SAINT (Bruker, 2003); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S160053680800144X/gw2037sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053680800144X/gw2037Isup2.hkl
Synthesis of hemiacetal (2): Salvinorin A (10 mg, 23 mmol) was placed in aqueous 5% KOH (5 ml) and refluxed for two hours producing a yellow solution. Upon reaching room temperature, the solution was cooled in an ice bath and neutralized with cold aqueous 0.5M HCl. The resulting precipitate was collected by vacuum filtration. The product was purified by passing through a short silica column eluting with ethyl acetate to yield 6.2 mg of 1a (69%).
1 ml of TMSCHN2 (0.13 mmol) in benzene was added at room temperature to a solution of 1a (20 mg, 0.05 mmol) in methanol (5 ml). The mixture was stirred at room temperature for 30 min and concentrated to give the corresponding dimethyl ester 2. The product was purified by
using hexanes: ethyl acetate (2:1) for elution. Yield 18.3 mg (87%).Crystals of dimethyl (2R,3aR,4R,6aR,7R,9S,9aS,9 bS)-2-(3-furyl)-9,9a-dihydroxy-3a,6a-dimethyldodecahydrobenzo[de]chromene-4,7-dicarboxylate (2) were obtained from slow evaporation of a solution in ethyl acetate/hexanes 1:9. A suitable crystal was coated with Paratone N oil, suspended in a CryoLoop (Hampton Research) and placed in a cooled nitrogen gas stream at 100 K on a Bruker D8 APEX II CCD sealed tube diffractometer with graphite monochromated Cu Ka (1.54178 Å) radiation. Data were measured using a series of combinations of phi and omega scans with 10 s frame exposures and 0.5o frame widths. Data collection, indexing and initial cell refinements were all carried out using APEX II software (Bruker, 2003).Frame integration and final cell refinements were done using SAINT (Bruker, 2003) software. The final cell parameters were determined from least-squares
on 3446 reflectionsConsidering that the
(Flack, 1983) does not confirm unambiguously the of the molecule, The chiral centers were assigned based in the original known configuration of the starting material, Salvinorin A.All H atoms were located in difference maps and treated as riding atoms, with the following distance restraints: C—H = 0.93 Å, Uiso=1.2Ueq (C) for Csp2, C—H = 0.98 Å, Uiso = 1.2Ueq (C) for CH, C—H = 0.97 Å, Uiso = 1.2Ueq (C) for CH2, C—H = 0.96 Å, Uiso = 1.5Ueq (C) for CH3, O—H = 0.82 Å, Uiso = 1.5Ueq (O) for OH.
Data collection: SMART (Bruker, 2003); cell
SMART (Bruker, 2003); data reduction: SAINT (Bruker, 2003); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C22H30O8 | F(000) = 452 |
Mr = 422.46 | Dx = 1.355 Mg m−3 |
Monoclinic, P21 | Cu Kα radiation, λ = 1.54178 Å |
Hall symbol: P 2yb | Cell parameters from 8551 reflections |
a = 11.6801 (5) Å | θ = 3.0–69.4° |
b = 6.0522 (3) Å | µ = 0.86 mm−1 |
c = 15.3739 (6) Å | T = 296 K |
β = 107.678 (2)° | Blocks, colourless |
V = 1035.47 (8) Å3 | 0.32 × 0.15 × 0.13 mm |
Z = 2 |
Bruker SMART CCD area-detector diffractometer | 3615 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube, Siemens KFF Cu 2 K90 | Rint = 0.037 |
Graphite monochromator | θmax = 69.4°, θmin = 3.0° |
phi and ω scans | h = −13→13 |
18724 measured reflections | k = −7→7 |
3726 independent reflections | l = −18→18 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.037 | H-atom parameters constrained |
wR(F2) = 0.096 | w = 1/[σ2(Fo2) + (0.0458P)2 + 0.4492P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max < 0.001 |
3726 reflections | Δρmax = 0.42 e Å−3 |
277 parameters | Δρmin = −0.21 e Å−3 |
1 restraint | Absolute structure: Flack (1983), 1587 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.14 (18) |
C22H30O8 | V = 1035.47 (8) Å3 |
Mr = 422.46 | Z = 2 |
Monoclinic, P21 | Cu Kα radiation |
a = 11.6801 (5) Å | µ = 0.86 mm−1 |
b = 6.0522 (3) Å | T = 296 K |
c = 15.3739 (6) Å | 0.32 × 0.15 × 0.13 mm |
β = 107.678 (2)° |
Bruker SMART CCD area-detector diffractometer | 3615 reflections with I > 2σ(I) |
18724 measured reflections | Rint = 0.037 |
3726 independent reflections |
R[F2 > 2σ(F2)] = 0.037 | H-atom parameters constrained |
wR(F2) = 0.096 | Δρmax = 0.42 e Å−3 |
S = 1.05 | Δρmin = −0.21 e Å−3 |
3726 reflections | Absolute structure: Flack (1983), 1587 Friedel pairs |
277 parameters | Absolute structure parameter: 0.14 (18) |
1 restraint |
Experimental. The structure was solved using Direct methods and difference Fourier techniques SHELXTL, V6.12 (Bruker, 2003). Hydrogen atoms were placed in their expected chemical positions using the HFIX command and were included in the final cycles of least squares with isotropic Uij related to the atoms ridden upon. All non-hydrogen atoms were refined anisotropically.Structure solution, refinement, graphics and generation of publication materials were performed by using SHELXTL, V6.12 software. Additional details of data collection and structure refinement are given in Table 1. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C2 | 0.18522 (17) | 0.9011 (4) | 0.91971 (13) | 0.0308 (5) | |
H2 | 0.1571 | 0.7482 | 0.9184 | 0.037* | |
C5 | 0.15034 (17) | 0.9159 (3) | 0.58226 (12) | 0.0226 (4) | |
H5A | 0.1171 | 0.7690 | 0.5668 | 0.027* | |
H5B | 0.1226 | 1.0076 | 0.5282 | 0.027* | |
C3 | 0.12566 (17) | 1.0070 (4) | 0.82782 (12) | 0.0261 (4) | |
H3A | 0.1552 | 1.1568 | 0.8281 | 0.031* | |
H3B | 0.0396 | 1.0144 | 0.8176 | 0.031* | |
C6 | 0.28737 (16) | 0.9033 (3) | 0.61198 (12) | 0.0217 (4) | |
H6A | 0.3195 | 1.0521 | 0.6224 | 0.026* | |
H6B | 0.3122 | 0.8401 | 0.5626 | 0.026* | |
C4 | 0.10549 (16) | 1.0123 (3) | 0.65832 (12) | 0.0209 (4) | |
H4 | 0.1380 | 1.1622 | 0.6711 | 0.025* | |
C8 | 0.54094 (17) | 0.7152 (4) | 0.82950 (13) | 0.0283 (4) | |
H8A | 0.5286 | 0.5568 | 0.8302 | 0.034* | |
H8B | 0.6268 | 0.7428 | 0.8472 | 0.034* | |
C9 | 0.48763 (17) | 0.8258 (3) | 0.89657 (12) | 0.0256 (4) | |
H9 | 0.4971 | 0.9857 | 0.8914 | 0.031* | |
C7 | 0.48158 (17) | 0.8048 (3) | 0.73302 (12) | 0.0230 (4) | |
H7 | 0.4950 | 0.9648 | 0.7349 | 0.028* | |
C3A | 0.15070 (16) | 0.8761 (3) | 0.74901 (11) | 0.0202 (4) | |
C6A | 0.34211 (16) | 0.7655 (3) | 0.69886 (12) | 0.0197 (4) | |
C9A | 0.35251 (18) | 0.7770 (3) | 0.87112 (13) | 0.0239 (4) | |
C9B | 0.29098 (16) | 0.8644 (3) | 0.77341 (11) | 0.0191 (4) | |
H9B | 0.3154 | 1.0198 | 0.7767 | 0.023* | |
C10 | 0.16237 (19) | 1.0186 (5) | 0.99865 (14) | 0.0448 (7) | |
C12 | 0.1441 (3) | 1.0759 (8) | 1.13703 (17) | 0.0705 (12) | |
H12 | 0.1433 | 1.0539 | 1.1967 | 0.085* | |
C11 | 0.1675 (3) | 0.9226 (8) | 1.0830 (2) | 0.0778 (12) | |
H11 | 0.1846 | 0.7751 | 1.0985 | 0.093* | |
C13 | 0.1359 (3) | 1.2334 (7) | 1.00599 (18) | 0.0751 (12) | |
H13 | 0.1281 | 1.3414 | 0.9615 | 0.090* | |
C16 | −0.03024 (17) | 1.0299 (3) | 0.62641 (12) | 0.0252 (4) | |
C18 | 0.54524 (17) | 0.7069 (4) | 0.66942 (13) | 0.0261 (4) | |
C14 | 0.08432 (17) | 0.6535 (3) | 0.73785 (13) | 0.0257 (4) | |
H14A | 0.1270 | 0.5548 | 0.7856 | 0.039* | |
H14B | 0.0801 | 0.5906 | 0.6796 | 0.039* | |
H14C | 0.0045 | 0.6763 | 0.7414 | 0.039* | |
C15 | 0.31545 (17) | 0.5190 (3) | 0.67784 (13) | 0.0259 (4) | |
H15A | 0.2316 | 0.5000 | 0.6460 | 0.039* | |
H15B | 0.3359 | 0.4370 | 0.7339 | 0.039* | |
H15C | 0.3623 | 0.4661 | 0.6405 | 0.039* | |
C19 | 0.6056 (3) | 0.7648 (5) | 0.53744 (18) | 0.0490 (7) | |
H19A | 0.6898 | 0.7427 | 0.5672 | 0.073* | |
H19B | 0.5951 | 0.8701 | 0.4890 | 0.073* | |
H19C | 0.5692 | 0.6270 | 0.5128 | 0.073* | |
C17 | −0.1957 (2) | 1.2172 (6) | 0.65095 (18) | 0.0505 (7) | |
H17A | −0.2322 | 1.2419 | 0.5868 | 0.076* | |
H17B | −0.2122 | 1.3404 | 0.6846 | 0.076* | |
H17C | −0.2279 | 1.0848 | 0.6688 | 0.076* | |
O1 | 0.31411 (11) | 0.9003 (3) | 0.93685 (8) | 0.0273 (3) | |
O3 | 0.32773 (13) | 0.5526 (2) | 0.87711 (9) | 0.0286 (3) | |
H3 | 0.3709 | 0.5030 | 0.9256 | 0.043* | |
O5 | −0.09773 (12) | 0.9134 (3) | 0.57030 (10) | 0.0352 (4) | |
O6 | −0.06776 (13) | 1.1939 (3) | 0.66985 (10) | 0.0349 (4) | |
O2 | 0.54549 (13) | 0.7663 (3) | 0.98856 (9) | 0.0311 (3) | |
H2A | 0.5935 | 0.6663 | 0.9902 | 0.047* | |
O7 | 0.58818 (15) | 0.5249 (3) | 0.67619 (11) | 0.0429 (4) | |
O8 | 0.54884 (15) | 0.8474 (3) | 0.60324 (11) | 0.0383 (4) | |
O4 | 0.1223 (2) | 1.2643 (7) | 1.09199 (17) | 0.1192 (16) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C2 | 0.0193 (9) | 0.0538 (13) | 0.0210 (9) | −0.0075 (10) | 0.0087 (7) | −0.0039 (9) |
C5 | 0.0235 (9) | 0.0264 (9) | 0.0172 (8) | −0.0001 (8) | 0.0053 (7) | 0.0016 (7) |
C3 | 0.0159 (9) | 0.0401 (11) | 0.0237 (9) | −0.0026 (8) | 0.0078 (7) | −0.0048 (9) |
C6 | 0.0233 (9) | 0.0242 (9) | 0.0195 (8) | −0.0030 (8) | 0.0093 (7) | −0.0008 (7) |
C4 | 0.0202 (9) | 0.0206 (9) | 0.0226 (9) | −0.0014 (7) | 0.0074 (7) | −0.0020 (7) |
C8 | 0.0190 (9) | 0.0402 (12) | 0.0239 (9) | 0.0031 (8) | 0.0037 (8) | −0.0023 (8) |
C9 | 0.0222 (10) | 0.0362 (11) | 0.0178 (8) | −0.0017 (8) | 0.0051 (7) | −0.0020 (8) |
C7 | 0.0198 (9) | 0.0281 (10) | 0.0215 (9) | −0.0020 (8) | 0.0067 (7) | −0.0046 (7) |
C3A | 0.0161 (9) | 0.0257 (9) | 0.0185 (8) | −0.0028 (7) | 0.0050 (7) | −0.0016 (7) |
C6A | 0.0174 (9) | 0.0236 (9) | 0.0180 (8) | −0.0013 (7) | 0.0054 (7) | −0.0011 (7) |
C9A | 0.0222 (10) | 0.0311 (10) | 0.0199 (8) | −0.0026 (8) | 0.0084 (7) | 0.0001 (8) |
C9B | 0.0174 (9) | 0.0207 (9) | 0.0190 (8) | −0.0034 (7) | 0.0053 (7) | −0.0003 (7) |
C10 | 0.0168 (10) | 0.098 (2) | 0.0218 (10) | −0.0058 (12) | 0.0089 (8) | −0.0109 (12) |
C12 | 0.0373 (15) | 0.160 (4) | 0.0190 (11) | 0.0052 (19) | 0.0150 (10) | −0.0089 (18) |
C11 | 0.082 (2) | 0.126 (3) | 0.0380 (15) | −0.036 (2) | 0.0370 (15) | −0.0145 (18) |
C13 | 0.072 (2) | 0.120 (3) | 0.0285 (13) | 0.050 (2) | 0.0076 (13) | −0.0206 (16) |
C16 | 0.0219 (9) | 0.0290 (10) | 0.0249 (9) | 0.0025 (8) | 0.0075 (8) | 0.0039 (8) |
C18 | 0.0175 (9) | 0.0341 (11) | 0.0254 (9) | 0.0010 (8) | 0.0048 (7) | −0.0053 (8) |
C14 | 0.0209 (9) | 0.0306 (10) | 0.0243 (9) | −0.0062 (8) | 0.0048 (7) | 0.0024 (8) |
C15 | 0.0252 (10) | 0.0257 (10) | 0.0254 (9) | 0.0003 (8) | 0.0060 (8) | −0.0028 (8) |
C19 | 0.0518 (16) | 0.0625 (17) | 0.0461 (13) | 0.0102 (13) | 0.0350 (12) | 0.0024 (13) |
C17 | 0.0283 (11) | 0.0711 (18) | 0.0494 (14) | 0.0197 (12) | 0.0077 (11) | −0.0069 (13) |
O1 | 0.0180 (7) | 0.0454 (8) | 0.0191 (6) | −0.0045 (6) | 0.0066 (5) | −0.0041 (6) |
O3 | 0.0278 (7) | 0.0308 (7) | 0.0235 (6) | −0.0033 (6) | 0.0022 (5) | 0.0080 (6) |
O5 | 0.0237 (7) | 0.0461 (9) | 0.0313 (7) | −0.0011 (7) | 0.0015 (6) | −0.0102 (7) |
O6 | 0.0259 (7) | 0.0379 (8) | 0.0393 (8) | 0.0089 (7) | 0.0074 (6) | −0.0058 (7) |
O2 | 0.0292 (8) | 0.0361 (8) | 0.0244 (7) | 0.0024 (6) | 0.0027 (6) | −0.0009 (6) |
O7 | 0.0443 (9) | 0.0492 (10) | 0.0389 (8) | 0.0204 (8) | 0.0181 (7) | 0.0006 (8) |
O8 | 0.0409 (9) | 0.0458 (10) | 0.0395 (8) | 0.0042 (7) | 0.0290 (7) | 0.0025 (7) |
O4 | 0.0566 (14) | 0.244 (5) | 0.0456 (13) | 0.063 (2) | −0.0011 (11) | −0.063 (2) |
C2—O1 | 1.447 (2) | C9A—O1 | 1.433 (2) |
C2—C10 | 1.499 (3) | C9A—C9B | 1.548 (2) |
C2—C3 | 1.515 (3) | C9B—H9B | 0.9800 |
C2—H2 | 0.9800 | C10—C13 | 1.349 (5) |
C5—C6 | 1.527 (3) | C10—C11 | 1.405 (4) |
C5—C4 | 1.535 (2) | C12—O4 | 1.318 (6) |
C5—H5A | 0.9700 | C12—C11 | 1.328 (5) |
C5—H5B | 0.9700 | C12—H12 | 0.9300 |
C3—C3A | 1.548 (3) | C11—H11 | 0.9300 |
C3—H3A | 0.9700 | C13—O4 | 1.391 (3) |
C3—H3B | 0.9700 | C13—H13 | 0.9300 |
C6—C6A | 1.540 (2) | C16—O5 | 1.204 (2) |
C6—H6A | 0.9700 | C16—O6 | 1.342 (3) |
C6—H6B | 0.9700 | C18—O7 | 1.202 (3) |
C4—C16 | 1.514 (2) | C18—O8 | 1.336 (3) |
C4—C3A | 1.567 (2) | C14—H14A | 0.9600 |
C4—H4 | 0.9800 | C14—H14B | 0.9600 |
C8—C9 | 1.513 (3) | C14—H14C | 0.9600 |
C8—C7 | 1.533 (3) | C15—H15A | 0.9600 |
C8—H8A | 0.9700 | C15—H15B | 0.9600 |
C8—H8B | 0.9700 | C15—H15C | 0.9600 |
C9—O2 | 1.416 (2) | C19—O8 | 1.456 (3) |
C9—C9A | 1.535 (3) | C19—H19A | 0.9600 |
C9—H9 | 0.9800 | C19—H19B | 0.9600 |
C7—C18 | 1.517 (3) | C19—H19C | 0.9600 |
C7—C6A | 1.571 (2) | C17—O6 | 1.440 (3) |
C7—H7 | 0.9800 | C17—H17A | 0.9600 |
C3A—C14 | 1.538 (3) | C17—H17B | 0.9600 |
C3A—C9B | 1.568 (2) | C17—H17C | 0.9600 |
C6A—C15 | 1.538 (3) | O3—H3 | 0.8200 |
C6A—C9B | 1.563 (2) | O2—H2A | 0.8200 |
C9A—O3 | 1.398 (2) | ||
O1—C2—C10 | 106.57 (15) | O3—C9A—O1 | 110.13 (15) |
O1—C2—C3 | 109.20 (15) | O3—C9A—C9 | 112.80 (17) |
C10—C2—C3 | 114.2 (2) | O1—C9A—C9 | 103.77 (15) |
O1—C2—H2 | 108.9 | O3—C9A—C9B | 110.57 (15) |
C10—C2—H2 | 108.9 | O1—C9A—C9B | 110.73 (15) |
C3—C2—H2 | 108.9 | C9—C9A—C9B | 108.67 (15) |
C6—C5—C4 | 111.12 (14) | C9A—C9B—C6A | 114.36 (15) |
C6—C5—H5A | 109.4 | C9A—C9B—C3A | 113.02 (14) |
C4—C5—H5A | 109.4 | C6A—C9B—C3A | 116.49 (14) |
C6—C5—H5B | 109.4 | C9A—C9B—H9B | 103.6 |
C4—C5—H5B | 109.4 | C6A—C9B—H9B | 103.6 |
H5A—C5—H5B | 108.0 | C3A—C9B—H9B | 103.6 |
C2—C3—C3A | 111.77 (17) | C13—C10—C11 | 105.5 (3) |
C2—C3—H3A | 109.3 | C13—C10—C2 | 128.8 (3) |
C3A—C3—H3A | 109.3 | C11—C10—C2 | 125.6 (3) |
C2—C3—H3B | 109.3 | O4—C12—C11 | 108.6 (3) |
C3A—C3—H3B | 109.3 | O4—C12—H12 | 125.7 |
H3A—C3—H3B | 107.9 | C11—C12—H12 | 125.7 |
C5—C6—C6A | 114.07 (15) | C12—C11—C10 | 109.2 (4) |
C5—C6—H6A | 108.7 | C12—C11—H11 | 125.4 |
C6A—C6—H6A | 108.7 | C10—C11—H11 | 125.4 |
C5—C6—H6B | 108.7 | C10—C13—O4 | 107.7 (3) |
C6A—C6—H6B | 108.7 | C10—C13—H13 | 126.1 |
H6A—C6—H6B | 107.6 | O4—C13—H13 | 126.1 |
C16—C4—C5 | 110.25 (14) | O5—C16—O6 | 123.23 (18) |
C16—C4—C3A | 111.23 (15) | O5—C16—C4 | 125.74 (18) |
C5—C4—C3A | 112.15 (15) | O6—C16—C4 | 111.03 (16) |
C16—C4—H4 | 107.7 | O7—C18—O8 | 122.7 (2) |
C5—C4—H4 | 107.7 | O7—C18—C7 | 125.1 (2) |
C3A—C4—H4 | 107.7 | O8—C18—C7 | 112.15 (17) |
C9—C8—C7 | 110.12 (16) | C3A—C14—H14A | 109.5 |
C9—C8—H8A | 109.6 | C3A—C14—H14B | 109.5 |
C7—C8—H8A | 109.6 | H14A—C14—H14B | 109.5 |
C9—C8—H8B | 109.6 | C3A—C14—H14C | 109.5 |
C7—C8—H8B | 109.6 | H14A—C14—H14C | 109.5 |
H8A—C8—H8B | 108.2 | H14B—C14—H14C | 109.5 |
O2—C9—C8 | 113.43 (16) | C6A—C15—H15A | 109.5 |
O2—C9—C9A | 110.34 (15) | C6A—C15—H15B | 109.5 |
C8—C9—C9A | 110.20 (15) | H15A—C15—H15B | 109.5 |
O2—C9—H9 | 107.5 | C6A—C15—H15C | 109.5 |
C8—C9—H9 | 107.5 | H15A—C15—H15C | 109.5 |
C9A—C9—H9 | 107.5 | H15B—C15—H15C | 109.5 |
C18—C7—C8 | 108.61 (16) | O8—C19—H19A | 109.5 |
C18—C7—C6A | 112.77 (14) | O8—C19—H19B | 109.5 |
C8—C7—C6A | 112.85 (15) | H19A—C19—H19B | 109.5 |
C18—C7—H7 | 107.4 | O8—C19—H19C | 109.5 |
C8—C7—H7 | 107.4 | H19A—C19—H19C | 109.5 |
C6A—C7—H7 | 107.4 | H19B—C19—H19C | 109.5 |
C14—C3A—C3 | 109.09 (16) | O6—C17—H17A | 109.5 |
C14—C3A—C4 | 109.84 (14) | O6—C17—H17B | 109.5 |
C3—C3A—C4 | 109.53 (15) | H17A—C17—H17B | 109.5 |
C14—C3A—C9B | 116.24 (16) | O6—C17—H17C | 109.5 |
C3—C3A—C9B | 105.55 (14) | H17A—C17—H17C | 109.5 |
C4—C3A—C9B | 106.38 (14) | H17B—C17—H17C | 109.5 |
C15—C6A—C6 | 109.81 (15) | C9A—O1—C2 | 113.84 (14) |
C15—C6A—C9B | 115.31 (16) | C9A—O3—H3 | 109.5 |
C6—C6A—C9B | 106.15 (14) | C16—O6—C17 | 116.61 (17) |
C15—C6A—C7 | 109.91 (15) | C9—O2—H2A | 109.5 |
C6—C6A—C7 | 108.86 (15) | C18—O8—C19 | 115.88 (19) |
C9B—C6A—C7 | 106.57 (13) | C12—O4—C13 | 108.9 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3···O2i | 0.82 | 1.99 | 2.757 (2) | 155 |
O2—H2A···O1i | 0.82 | 2.07 | 2.787 (2) | 146 |
Symmetry code: (i) −x+1, y−1/2, −z+2. |
Experimental details
Crystal data | |
Chemical formula | C22H30O8 |
Mr | 422.46 |
Crystal system, space group | Monoclinic, P21 |
Temperature (K) | 296 |
a, b, c (Å) | 11.6801 (5), 6.0522 (3), 15.3739 (6) |
β (°) | 107.678 (2) |
V (Å3) | 1035.47 (8) |
Z | 2 |
Radiation type | Cu Kα |
µ (mm−1) | 0.86 |
Crystal size (mm) | 0.32 × 0.15 × 0.13 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 18724, 3726, 3615 |
Rint | 0.037 |
(sin θ/λ)max (Å−1) | 0.607 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.037, 0.096, 1.05 |
No. of reflections | 3726 |
No. of parameters | 277 |
No. of restraints | 1 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.42, −0.21 |
Absolute structure | Flack (1983), 1587 Friedel pairs |
Absolute structure parameter | 0.14 (18) |
Computer programs: SMART (Bruker, 2003), SAINT (Bruker, 2003), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3···O2i | 0.82 | 1.99 | 2.757 (2) | 155.3 |
O2—H2A···O1i | 0.82 | 2.07 | 2.787 (2) | 146.2 |
Symmetry code: (i) −x+1, y−1/2, −z+2. |
Acknowledgements
The authors thank Dr K. Hardcastle for his helpful advice. We also thank the Center for Disease Control and Prevention, USA, for providing financial assistance (CDC cooperative agreements 1UO1 CI000211–03 and1UO1 CI000362–01). This investigation was conducted in a facility constructed with support from Research Facilities Improvement Program grant No. C06 Rr-14503–01 from the National Center for Research Resources, National Institutes of Health.
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
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The structure was solved using Direct methods and difference Fourier techniques SHELXTL, V6.12 (Sheldrick, 2008). Hydrogen atoms were placed in their expected chemical positions using the HFIX command and were included in the final cycles of least squares with isotropic Uij related to the atoms ridden upon. All non-hydrogen atoms were refined anisotropically.Structure solution, refinement, graphics and generation of publication materials were performed by using SHELXTL, V6.12 software. Additional details of data collection and structure refinement are given in Table 1.