metal-organic compounds
Pentaaqua(1H-benzimidazole-5,6-dicarboxylato-κN3)copper(II) pentahydrate
aCollege of Environmental and Energy Engineering, Beijing University of Technology, Beijing 100022, People's Republic of China
*Correspondence e-mail: xieyabo@bjut.edu.cn
The title compound, [Cu(C9H4N2O4)(H2O)5]·5H2O, contains one crystallographically independent CuII atom and one 1H-benzimidazole-5,6-dicarboxylate (bdc) ligand, along with five coordinated and five uncoordinated water molecules. The CuII atom is six-coordinated by one N atom from the bdc ligand and five O atoms from water molecules, giving an octahedral coordination geometry. Hydrogen bonds link the mononuclear complex and uncoordinated water molecules into a three-dimensional network.
Related literature
For related literature, see: Lemos et al. (2004); Park et al. (2006); Zhang et al. (2007).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 1998); cell SAINT (Bruker, 1998); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536808017595/kj2082sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808017595/kj2082Isup2.hkl
The title complex was synthesized by carefully layering a solution of Cu(NO3)2.3H2O (24 mg, 0.1 mmol) in MeOH (10 ml) on top of a solution of H2L (27 mg, 0.1 mmol) and LiOH (8.4 mg, 0.2 mmol) in H2O (10 ml) in a test-tube. After about several months at room temperature, green block-shaped single crystals suitable for X-ray investigation appeared at the boundary between MeOH and H2O with a yield of 25%.
H atoms of C were included in calculated positions and treated in the subsequent
as riding atoms, with C—H = 0.93 Å and Uiso(H) = 1.2 Ueq(C,N). The H atoms of the water molecules were located in Fourier difference maps and refined with isotropic displacement parameters set at 1.5 times those of the parent O atoms.Data collection: SMART (Bruker, 1998); cell
SAINT (Bruker, 1998); data reduction: SAINT (Bruker, 1998); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. Structure of the title complex, showing displacement ellipsoids at the 30% probability level. |
[Cu(C9H4N2O4)(H2O)5]·5H2O | Z = 2 |
Mr = 447.84 | F(000) = 466 |
Triclinic, P1 | Dx = 1.647 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 6.8449 (5) Å | Cell parameters from 2164 reflections |
b = 11.4381 (8) Å | θ = 2.7–27.7° |
c = 12.3549 (9) Å | µ = 1.28 mm−1 |
α = 78.1549 (1)° | T = 296 K |
β = 78.6224 (1)° | Block, green |
γ = 74.8804 (1)° | 0.24 × 0.24 × 0.24 mm |
V = 903.29 (11) Å3 |
Bruker SMART CCD area-detector diffractometer | 3164 independent reflections |
Radiation source: fine-focus sealed tube | 2774 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.018 |
ϕ and ω scans | θmax = 25.0°, θmin = 1.7° |
Absorption correction: multi-scan (SADABS; Bruker, 1998) | h = −8→7 |
Tmin = 0.748, Tmax = 0.748 | k = −13→9 |
4648 measured reflections | l = −14→13 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.034 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.092 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0394P)2 + 1.2855P] where P = (Fo2 + 2Fc2)/3 |
3164 reflections | (Δ/σ)max = 0.001 |
295 parameters | Δρmax = 0.32 e Å−3 |
20 restraints | Δρmin = −0.54 e Å−3 |
[Cu(C9H4N2O4)(H2O)5]·5H2O | γ = 74.8804 (1)° |
Mr = 447.84 | V = 903.29 (11) Å3 |
Triclinic, P1 | Z = 2 |
a = 6.8449 (5) Å | Mo Kα radiation |
b = 11.4381 (8) Å | µ = 1.28 mm−1 |
c = 12.3549 (9) Å | T = 296 K |
α = 78.1549 (1)° | 0.24 × 0.24 × 0.24 mm |
β = 78.6224 (1)° |
Bruker SMART CCD area-detector diffractometer | 3164 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 1998) | 2774 reflections with I > 2σ(I) |
Tmin = 0.748, Tmax = 0.748 | Rint = 0.018 |
4648 measured reflections |
R[F2 > 2σ(F2)] = 0.034 | 20 restraints |
wR(F2) = 0.092 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | Δρmax = 0.32 e Å−3 |
3164 reflections | Δρmin = −0.54 e Å−3 |
295 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cu2 | 0.40064 (5) | 0.90276 (3) | 0.25900 (3) | 0.01956 (13) | |
C1 | 0.5610 (5) | 0.7927 (3) | 0.0504 (2) | 0.0208 (6) | |
H1B | 0.5372 | 0.8719 | 0.0100 | 0.025* | |
C2 | 0.5701 (4) | 0.6408 (2) | 0.1857 (2) | 0.0155 (6) | |
C3 | 0.5523 (4) | 0.5625 (2) | 0.2878 (2) | 0.0164 (6) | |
H3A | 0.4908 | 0.5933 | 0.3535 | 0.020* | |
C4 | 0.6288 (4) | 0.4374 (2) | 0.2891 (2) | 0.0164 (6) | |
C5 | 0.7248 (4) | 0.3904 (3) | 0.1890 (2) | 0.0174 (6) | |
C6 | 0.7410 (5) | 0.4686 (3) | 0.0879 (2) | 0.0209 (6) | |
H6A | 0.8036 | 0.4385 | 0.0220 | 0.025* | |
C7 | 0.6613 (4) | 0.5927 (3) | 0.0878 (2) | 0.0188 (6) | |
C8 | 0.6183 (4) | 0.3556 (2) | 0.4017 (2) | 0.0181 (6) | |
C9 | 0.7972 (5) | 0.2539 (3) | 0.1890 (2) | 0.0200 (6) | |
N1 | 0.6497 (4) | 0.6937 (2) | 0.0032 (2) | 0.0232 (6) | |
H1A | 0.6921 | 0.6925 | −0.0670 | 0.028* | |
N2 | 0.5095 (4) | 0.7684 (2) | 0.16013 (19) | 0.0178 (5) | |
O1 | 0.7832 (3) | 0.3070 (2) | 0.43846 (19) | 0.0333 (6) | |
O1W | 0.1811 (3) | 0.8182 (2) | 0.36057 (18) | 0.0231 (5) | |
H1D | 0.206 (6) | 0.780 (3) | 0.418 (2) | 0.035* | |
H1C | 0.145 (6) | 0.774 (3) | 0.331 (3) | 0.035* | |
O2 | 0.4460 (3) | 0.3461 (2) | 0.45410 (18) | 0.0296 (5) | |
O2W | 0.2065 (4) | 0.9916 (2) | 0.14521 (19) | 0.0267 (5) | |
H2B | 0.151 (6) | 0.950 (3) | 0.122 (3) | 0.040* | |
H2A | 0.119 (5) | 1.055 (3) | 0.154 (3) | 0.040* | |
O3 | 0.6926 (3) | 0.18604 (18) | 0.25581 (18) | 0.0281 (5) | |
O3W | 0.6198 (3) | 0.9979 (2) | 0.16683 (18) | 0.0236 (5) | |
H3B | 0.652 (6) | 1.045 (3) | 0.196 (3) | 0.035* | |
H3C | 0.719 (5) | 0.957 (3) | 0.139 (3) | 0.035* | |
O4 | 0.9510 (3) | 0.21717 (19) | 0.12100 (18) | 0.0296 (5) | |
O4W | 0.2824 (5) | 1.0432 (2) | 0.3484 (2) | 0.0410 (7) | |
H4B | 0.255 (7) | 1.113 (3) | 0.320 (4) | 0.061* | |
H4A | 0.275 (7) | 1.030 (4) | 0.416 (2) | 0.061* | |
O5W | 0.6079 (3) | 0.8194 (2) | 0.36953 (18) | 0.0241 (5) | |
H5B | 0.647 (6) | 0.873 (3) | 0.385 (3) | 0.036* | |
H5A | 0.579 (6) | 0.775 (3) | 0.424 (2) | 0.036* | |
O6W | 0.0815 (4) | 0.4415 (2) | 0.3683 (2) | 0.0397 (6) | |
H6B | −0.005 (6) | 0.402 (4) | 0.403 (4) | 0.060* | |
H6C | 0.164 (6) | 0.421 (4) | 0.410 (3) | 0.060* | |
O7W | 0.2891 (4) | 0.2718 (2) | 0.2314 (2) | 0.0330 (5) | |
H7A | 0.406 (4) | 0.257 (4) | 0.244 (4) | 0.050* | |
H7B | 0.224 (6) | 0.331 (3) | 0.262 (3) | 0.050* | |
O8W | 0.9900 (4) | 0.6813 (2) | 0.2776 (2) | 0.0353 (6) | |
H8B | 0.874 (4) | 0.710 (4) | 0.303 (3) | 0.053* | |
H8A | 1.008 (7) | 0.609 (3) | 0.303 (4) | 0.053* | |
O9W | −0.0044 (4) | 0.8476 (2) | 0.0862 (2) | 0.0339 (6) | |
H9B | 0.018 (7) | 0.825 (4) | 0.027 (3) | 0.051* | |
H9A | 0.013 (7) | 0.789 (3) | 0.133 (3) | 0.051* | |
O10W | 0.8011 (4) | 0.9835 (2) | 0.4212 (2) | 0.0312 (5) | |
H10B | 0.779 (6) | 1.053 (3) | 0.387 (3) | 0.047* | |
H10A | 0.919 (4) | 0.953 (4) | 0.402 (3) | 0.047* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cu2 | 0.0244 (2) | 0.0145 (2) | 0.0180 (2) | −0.00297 (14) | −0.00237 (14) | −0.00150 (14) |
C1 | 0.0287 (16) | 0.0122 (14) | 0.0197 (15) | −0.0042 (12) | −0.0049 (12) | 0.0018 (11) |
C2 | 0.0185 (14) | 0.0112 (13) | 0.0165 (14) | −0.0022 (11) | −0.0039 (11) | −0.0021 (11) |
C3 | 0.0208 (15) | 0.0161 (14) | 0.0120 (13) | −0.0041 (11) | −0.0004 (11) | −0.0040 (11) |
C4 | 0.0193 (14) | 0.0141 (14) | 0.0159 (14) | −0.0041 (11) | −0.0056 (11) | 0.0005 (11) |
C5 | 0.0193 (14) | 0.0140 (14) | 0.0183 (14) | −0.0022 (11) | −0.0033 (11) | −0.0031 (11) |
C6 | 0.0280 (16) | 0.0184 (15) | 0.0141 (14) | −0.0040 (12) | 0.0024 (12) | −0.0046 (11) |
C7 | 0.0242 (15) | 0.0157 (14) | 0.0146 (14) | −0.0038 (12) | −0.0028 (11) | 0.0010 (11) |
C8 | 0.0270 (16) | 0.0118 (14) | 0.0153 (14) | −0.0054 (12) | −0.0039 (12) | 0.0000 (11) |
C9 | 0.0253 (16) | 0.0148 (14) | 0.0203 (15) | −0.0010 (12) | −0.0084 (12) | −0.0037 (12) |
N1 | 0.0372 (15) | 0.0161 (13) | 0.0117 (12) | −0.0040 (11) | 0.0002 (11) | 0.0016 (10) |
N2 | 0.0240 (13) | 0.0106 (12) | 0.0168 (12) | −0.0022 (10) | −0.0031 (10) | −0.0002 (9) |
O1 | 0.0296 (13) | 0.0388 (14) | 0.0270 (12) | −0.0103 (10) | −0.0113 (10) | 0.0145 (10) |
O1W | 0.0278 (12) | 0.0234 (12) | 0.0173 (11) | −0.0090 (9) | −0.0051 (9) | 0.0038 (9) |
O2 | 0.0263 (12) | 0.0315 (13) | 0.0239 (12) | −0.0079 (10) | −0.0016 (9) | 0.0111 (10) |
O2W | 0.0290 (13) | 0.0182 (12) | 0.0315 (12) | 0.0036 (9) | −0.0134 (10) | −0.0038 (10) |
O3 | 0.0342 (13) | 0.0142 (11) | 0.0338 (13) | −0.0069 (9) | −0.0013 (10) | −0.0013 (9) |
O3W | 0.0270 (12) | 0.0193 (11) | 0.0253 (12) | −0.0088 (9) | 0.0003 (9) | −0.0050 (9) |
O4 | 0.0333 (13) | 0.0177 (11) | 0.0302 (12) | 0.0044 (9) | 0.0016 (10) | −0.0061 (9) |
O4W | 0.0744 (19) | 0.0175 (12) | 0.0255 (13) | −0.0081 (12) | 0.0065 (13) | −0.0079 (11) |
O5W | 0.0322 (12) | 0.0231 (12) | 0.0182 (11) | −0.0122 (10) | −0.0075 (9) | 0.0053 (9) |
O6W | 0.0334 (15) | 0.0358 (15) | 0.0475 (17) | −0.0081 (12) | −0.0107 (12) | 0.0035 (12) |
O7W | 0.0357 (14) | 0.0362 (14) | 0.0265 (12) | −0.0074 (12) | −0.0041 (11) | −0.0054 (10) |
O8W | 0.0307 (13) | 0.0291 (13) | 0.0446 (15) | −0.0055 (11) | −0.0069 (11) | −0.0029 (11) |
O9W | 0.0407 (14) | 0.0334 (14) | 0.0280 (13) | −0.0050 (11) | −0.0076 (11) | −0.0080 (11) |
O10W | 0.0313 (13) | 0.0268 (13) | 0.0305 (13) | −0.0033 (11) | −0.0033 (11) | 0.0007 (10) |
Cu2—O4W | 2.037 (2) | C9—O4 | 1.248 (4) |
Cu2—O2W | 2.055 (2) | C9—O3 | 1.261 (4) |
Cu2—N2 | 2.055 (2) | N1—H1A | 0.8600 |
Cu2—O1W | 2.070 (2) | O1W—H1D | 0.78 (2) |
Cu2—O5W | 2.076 (2) | O1W—H1C | 0.80 (2) |
Cu2—O3W | 2.097 (2) | O2W—H2B | 0.80 (3) |
C1—N2 | 1.322 (4) | O2W—H2A | 0.82 (3) |
C1—N1 | 1.328 (4) | O3W—H3B | 0.81 (2) |
C1—H1B | 0.9300 | O3W—H3C | 0.78 (2) |
C2—C3 | 1.393 (4) | O4W—H4B | 0.79 (3) |
C2—N2 | 1.396 (3) | O4W—H4A | 0.81 (3) |
C2—C7 | 1.397 (4) | O5W—H5B | 0.80 (2) |
C3—C4 | 1.387 (4) | O5W—H5A | 0.78 (2) |
C3—H3A | 0.9300 | O6W—H6B | 0.84 (3) |
C4—C5 | 1.420 (4) | O6W—H6C | 0.79 (3) |
C4—C8 | 1.510 (4) | O7W—H7A | 0.81 (3) |
C5—C6 | 1.382 (4) | O7W—H7B | 0.83 (3) |
C5—C9 | 1.510 (4) | O8W—H8B | 0.80 (3) |
C6—C7 | 1.381 (4) | O8W—H8A | 0.81 (3) |
C6—H6A | 0.9300 | O9W—H9B | 0.81 (3) |
C7—N1 | 1.387 (4) | O9W—H9A | 0.79 (3) |
C8—O2 | 1.248 (4) | O10W—H10B | 0.81 (3) |
C8—O1 | 1.249 (4) | O10W—H10A | 0.80 (3) |
O4W—Cu2—O2W | 88.82 (10) | C6—C7—C2 | 122.3 (3) |
O4W—Cu2—N2 | 176.07 (10) | N1—C7—C2 | 105.0 (2) |
O2W—Cu2—N2 | 87.32 (9) | O2—C8—O1 | 124.5 (3) |
O4W—Cu2—O1W | 86.06 (10) | O2—C8—C4 | 118.2 (2) |
O2W—Cu2—O1W | 92.49 (9) | O1—C8—C4 | 117.3 (3) |
N2—Cu2—O1W | 94.83 (9) | O4—C9—O3 | 125.0 (3) |
O4W—Cu2—O5W | 90.71 (11) | O4—C9—C5 | 117.9 (3) |
O2W—Cu2—O5W | 176.77 (9) | O3—C9—C5 | 117.0 (3) |
N2—Cu2—O5W | 93.11 (9) | C1—N1—C7 | 107.4 (2) |
O1W—Cu2—O5W | 90.66 (9) | C1—N1—H1A | 126.3 |
O4W—Cu2—O3W | 89.28 (10) | C7—N1—H1A | 126.3 |
O2W—Cu2—O3W | 89.14 (9) | C1—N2—C2 | 104.4 (2) |
N2—Cu2—O3W | 89.94 (9) | C1—N2—Cu2 | 122.93 (19) |
O1W—Cu2—O3W | 175.03 (9) | C2—N2—Cu2 | 132.25 (19) |
O5W—Cu2—O3W | 87.67 (9) | Cu2—O1W—H1D | 118 (3) |
N2—C1—N1 | 113.8 (2) | Cu2—O1W—H1C | 113 (3) |
N2—C1—H1B | 123.1 | H1D—O1W—H1C | 106 (4) |
N1—C1—H1B | 123.1 | Cu2—O2W—H2B | 117 (3) |
C3—C2—N2 | 130.6 (3) | Cu2—O2W—H2A | 123 (3) |
C3—C2—C7 | 120.0 (3) | H2B—O2W—H2A | 105 (4) |
N2—C2—C7 | 109.4 (2) | Cu2—O3W—H3B | 118 (3) |
C4—C3—C2 | 118.3 (3) | Cu2—O3W—H3C | 115 (3) |
C4—C3—H3A | 120.8 | H3B—O3W—H3C | 109 (4) |
C2—C3—H3A | 120.8 | Cu2—O4W—H4B | 123 (3) |
C3—C4—C5 | 120.9 (3) | Cu2—O4W—H4A | 120 (3) |
C3—C4—C8 | 117.1 (2) | H4B—O4W—H4A | 116 (5) |
C5—C4—C8 | 121.9 (2) | Cu2—O5W—H5B | 107 (3) |
C6—C5—C4 | 120.5 (3) | Cu2—O5W—H5A | 122 (3) |
C6—C5—C9 | 118.4 (3) | H5B—O5W—H5A | 109 (4) |
C4—C5—C9 | 121.0 (3) | H6B—O6W—H6C | 100 (5) |
C7—C6—C5 | 117.9 (3) | H7A—O7W—H7B | 107 (4) |
C7—C6—H6A | 121.0 | H8B—O8W—H8A | 104 (5) |
C5—C6—H6A | 121.0 | H9B—O9W—H9A | 108 (4) |
C6—C7—N1 | 132.7 (3) | H10B—O10W—H10A | 107 (4) |
N2—C2—C3—C4 | −179.4 (3) | C4—C5—C9—O4 | −148.5 (3) |
C7—C2—C3—C4 | 0.6 (4) | C6—C5—C9—O3 | −141.7 (3) |
C2—C3—C4—C5 | 0.7 (4) | C4—C5—C9—O3 | 33.8 (4) |
C2—C3—C4—C8 | 176.6 (3) | N2—C1—N1—C7 | −0.4 (4) |
C3—C4—C5—C6 | −1.1 (4) | C6—C7—N1—C1 | −178.6 (3) |
C8—C4—C5—C6 | −176.7 (3) | C2—C7—N1—C1 | 1.0 (3) |
C3—C4—C5—C9 | −176.4 (3) | N1—C1—N2—C2 | −0.5 (3) |
C8—C4—C5—C9 | 7.9 (4) | N1—C1—N2—Cu2 | 172.7 (2) |
C4—C5—C6—C7 | 0.1 (4) | C3—C2—N2—C1 | −178.9 (3) |
C9—C5—C6—C7 | 175.5 (3) | C7—C2—N2—C1 | 1.1 (3) |
C5—C6—C7—N1 | −179.2 (3) | C3—C2—N2—Cu2 | 8.8 (5) |
C5—C6—C7—C2 | 1.3 (5) | C7—C2—N2—Cu2 | −171.1 (2) |
C3—C2—C7—C6 | −1.6 (5) | O2W—Cu2—N2—C1 | 47.3 (2) |
N2—C2—C7—C6 | 178.3 (3) | O1W—Cu2—N2—C1 | 139.6 (2) |
C3—C2—C7—N1 | 178.7 (3) | O5W—Cu2—N2—C1 | −129.5 (2) |
N2—C2—C7—N1 | −1.3 (3) | O3W—Cu2—N2—C1 | −41.8 (2) |
C3—C4—C8—O2 | 67.2 (4) | O2W—Cu2—N2—C2 | −141.6 (3) |
C5—C4—C8—O2 | −116.9 (3) | O1W—Cu2—N2—C2 | −49.4 (3) |
C3—C4—C8—O1 | −109.2 (3) | O5W—Cu2—N2—C2 | 41.6 (3) |
C5—C4—C8—O1 | 66.7 (4) | O3W—Cu2—N2—C2 | 129.2 (3) |
C6—C5—C9—O4 | 36.1 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
O10W—H10A···O1Wi | 0.80 (3) | 2.09 (3) | 2.855 (3) | 160 (4) |
O10W—H10B···O3ii | 0.81 (3) | 2.05 (3) | 2.802 (3) | 155 (4) |
O9W—H9B···O4iii | 0.81 (3) | 1.94 (3) | 2.739 (3) | 174 (4) |
O7W—H7B···O6W | 0.83 (3) | 1.95 (3) | 2.758 (4) | 166 (4) |
O7W—H7A···O3 | 0.81 (3) | 1.94 (3) | 2.735 (3) | 165 (4) |
O6W—H6C···O2 | 0.79 (3) | 2.03 (3) | 2.773 (3) | 156 (5) |
O6W—H6B···O1iv | 0.84 (3) | 1.96 (3) | 2.772 (4) | 162 (5) |
O5W—H5A···O2v | 0.78 (2) | 1.84 (3) | 2.611 (3) | 170 (4) |
O5W—H5B···O10W | 0.80 (2) | 2.01 (3) | 2.793 (3) | 169 (4) |
O4W—H4A···O10Wvi | 0.81 (3) | 1.96 (3) | 2.760 (3) | 168 (5) |
O4W—H4B···O7Wii | 0.79 (3) | 1.97 (3) | 2.723 (4) | 160 (5) |
O3W—H3C···O9Wi | 0.78 (2) | 2.05 (3) | 2.820 (3) | 172 (4) |
O3W—H3B···O3ii | 0.81 (2) | 2.00 (3) | 2.800 (3) | 170 (4) |
O2W—H2A···O4vii | 0.82 (3) | 1.93 (3) | 2.709 (3) | 160 (4) |
O2W—H2B···O9W | 0.80 (3) | 1.94 (3) | 2.735 (3) | 172 (4) |
O1W—H1D···O1v | 0.78 (2) | 1.85 (3) | 2.621 (3) | 170 (4) |
N1—H1A···O7Wiii | 0.86 | 1.97 | 2.805 (3) | 163 |
Symmetry codes: (i) x+1, y, z; (ii) x, y+1, z; (iii) −x+1, −y+1, −z; (iv) x−1, y, z; (v) −x+1, −y+1, −z+1; (vi) −x+1, −y+2, −z+1; (vii) x−1, y+1, z. |
Experimental details
Crystal data | |
Chemical formula | [Cu(C9H4N2O4)(H2O)5]·5H2O |
Mr | 447.84 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 296 |
a, b, c (Å) | 6.8449 (5), 11.4381 (8), 12.3549 (9) |
α, β, γ (°) | 78.1549 (1), 78.6224 (1), 74.8804 (1) |
V (Å3) | 903.29 (11) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 1.28 |
Crystal size (mm) | 0.24 × 0.24 × 0.24 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 1998) |
Tmin, Tmax | 0.748, 0.748 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4648, 3164, 2774 |
Rint | 0.018 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.034, 0.092, 1.05 |
No. of reflections | 3164 |
No. of parameters | 295 |
No. of restraints | 20 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.32, −0.54 |
Computer programs: SMART (Bruker, 1998), SAINT (Bruker, 1998), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O10W—H10A···O1Wi | 0.80 (3) | 2.09 (3) | 2.855 (3) | 160 (4) |
O10W—H10B···O3ii | 0.81 (3) | 2.05 (3) | 2.802 (3) | 155 (4) |
O9W—H9B···O4iii | 0.81 (3) | 1.94 (3) | 2.739 (3) | 174 (4) |
O7W—H7B···O6W | 0.83 (3) | 1.95 (3) | 2.758 (4) | 166 (4) |
O7W—H7A···O3 | 0.81 (3) | 1.94 (3) | 2.735 (3) | 165 (4) |
O6W—H6C···O2 | 0.79 (3) | 2.03 (3) | 2.773 (3) | 156 (5) |
O6W—H6B···O1iv | 0.84 (3) | 1.96 (3) | 2.772 (4) | 162 (5) |
O5W—H5A···O2v | 0.78 (2) | 1.84 (3) | 2.611 (3) | 170 (4) |
O5W—H5B···O10W | 0.80 (2) | 2.01 (3) | 2.793 (3) | 169 (4) |
O4W—H4A···O10Wvi | 0.81 (3) | 1.96 (3) | 2.760 (3) | 168 (5) |
O4W—H4B···O7Wii | 0.79 (3) | 1.97 (3) | 2.723 (4) | 160 (5) |
O3W—H3C···O9Wi | 0.78 (2) | 2.05 (3) | 2.820 (3) | 172 (4) |
O3W—H3B···O3ii | 0.81 (2) | 2.00 (3) | 2.800 (3) | 170 (4) |
O2W—H2A···O4vii | 0.82 (3) | 1.93 (3) | 2.709 (3) | 160 (4) |
O2W—H2B···O9W | 0.80 (3) | 1.94 (3) | 2.735 (3) | 172 (4) |
O1W—H1D···O1v | 0.78 (2) | 1.85 (3) | 2.621 (3) | 170 (4) |
N1—H1A···O7Wiii | 0.86 | 1.97 | 2.805 (3) | 162.5 |
Symmetry codes: (i) x+1, y, z; (ii) x, y+1, z; (iii) −x+1, −y+1, −z; (iv) x−1, y, z; (v) −x+1, −y+1, −z+1; (vi) −x+1, −y+2, −z+1; (vii) x−1, y+1, z. |
Acknowledgements
This work was supported by the Funding Project for Academic Human Resources Development in Institutions of Higher Learning under the Jurisdiction of Beijing Municipality.
References
Bruker (1998). SMART, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
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Park, K. S., Ni, Z., Choi, J. Y., Huang, R., Uribe-Romo, F. J., Chae, H. K., O'Keeffe, M. & Yaghi, O. M. (2006). Proc. Natl Acad. Sci. USA, 103, 10186–10191. Web of Science CSD CrossRef PubMed CAS Google Scholar
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Several coordination polymers formed by the ligand 1H-benzoimidazole-5,6-dicarboxylic acid have been reported recently: µ2-2,2'-Bibenzimidazolato-N',N'',N''')tetrakis (triphenylphosphine)-di-copper(I) dichloromethane solvate (Lemos et al., 2004), catena-poly [tetrakis(µ2Benzimidazolato-N,N')-di-Co(II) unknown clathrate hydrate] (Park et al., 2006), and catena-poly [bis (µ5Benzotriazole-5-carboxylate) -bis(µ2-hydroxo)-tri-Co(II)] (Zhang et al., 2007) The first complex is a binuclear structure and the latter two are 3D porous metal-organic frameworks. However, up to now, the CuII complex of the 1H-benzoimidazole-5,6-dicarboxylic acid ligand (H2L), has not been reported.
As shown in Figure 1, the title compound has a mononuclear structure, in which there exists only one crystallographically independent Cu (II) atom and only one 1H-benzoimidazole-5,6-dicarboxylate ligand, along with five coordinated and five uncoordinated water. Each Cu (II) is six-coordinated with one N atom from the ligand, and five O atoms from water molecules, giving an octahedral coordination geometry. Hydrogen bonds link the mononuclear complex and uncoordinated water molecules into a three-dimensional network.