organic compounds
2-(4-Aminophenyl)-1,3-benzoxazole
aSchool of Chemical and Materials Engineering, Huangshi Institute of Technology, Huangshi 435003, People's Republic of China
*Correspondence e-mail: zy0340907@yahoo.com.cn
In the title molecule, C13H10N2O, the dihedral angle between the benzoxazole ring system and the benzene ring is 11.8 (1)°. In the molecules are linked by intermolecular N—H⋯N hydrogen bonds and π⋯π interactions [centroid–centroid distance = 3.6560 (15) Å] to form a two-dimensional network.
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2001); cell SAINT-Plus (Bruker, 2001); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S160053680801653X/lh2630sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053680801653X/lh2630Isup2.hkl
All reagents and solvents were used as obtained without further purification. 4-aminobenzoic acid (13.7 g, 0.1 mol) and 2-aminophenol (10.9 g, 0.1 mmol) were mixed together with polyphosphoric acid (50 g) and heated to 493 K under N2 atmosphere for 4 h. The reaction mixture was cooled to room temperature and poured into 10% K2CO3 solution. The precipitate was filtered under reduced pressure. Brown crystals were obtained by recrystallization from acetone-water.Yield: 88%; Analysis calculated for C13H10N2O: C 74.29, H 4.76, N 13.33%; found: C 74.26, H 4.78, N 13.35%.
All the aromatic H atoms were located at the geometrical positions with C—H=0.93 Å(aromatic), and the Uiso values were set 1.2 times of their carrier atoms. H2A and H2B were found in difference Fourier maps and refined with the constraint of N—H=0.86 Å (amine) and Uiso(H)=1.2Ueq(N).
Data collection: SMART (Bruker, 2001); cell
SAINT-Plus (Bruker, 2001); data reduction: SAINT-Plus (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C13H10N2O | F(000) = 440 |
Mr = 210.23 | Dx = 1.355 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 1089 reflections |
a = 4.1461 (3) Å | θ = 2.6–22.6° |
b = 19.5420 (12) Å | µ = 0.09 mm−1 |
c = 12.7705 (8) Å | T = 298 K |
β = 95.243 (1)° | Block, brown |
V = 1030.38 (12) Å3 | 0.30 × 0.20 × 0.15 mm |
Z = 4 |
Bruker SMART CCD diffractometer | 1902 independent reflections |
Radiation source: fine-focus sealed tube | 1315 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.086 |
ϕ and ω scans | θmax = 25.5°, θmin = 1.9° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | h = −4→5 |
Tmin = 0.974, Tmax = 0.987 | k = −23→17 |
4628 measured reflections | l = −14→15 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.065 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.151 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.09 | w = 1/[σ2(Fo2) + (0.0636P)2 + 0.0374P] where P = (Fo2 + 2Fc2)/3 |
1902 reflections | (Δ/σ)max < 0.001 |
151 parameters | Δρmax = 0.17 e Å−3 |
2 restraints | Δρmin = −0.22 e Å−3 |
C13H10N2O | V = 1030.38 (12) Å3 |
Mr = 210.23 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 4.1461 (3) Å | µ = 0.09 mm−1 |
b = 19.5420 (12) Å | T = 298 K |
c = 12.7705 (8) Å | 0.30 × 0.20 × 0.15 mm |
β = 95.243 (1)° |
Bruker SMART CCD diffractometer | 1902 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | 1315 reflections with I > 2σ(I) |
Tmin = 0.974, Tmax = 0.987 | Rint = 0.086 |
4628 measured reflections |
R[F2 > 2σ(F2)] = 0.065 | 2 restraints |
wR(F2) = 0.151 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.09 | Δρmax = 0.17 e Å−3 |
1902 reflections | Δρmin = −0.22 e Å−3 |
151 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 1.1291 (4) | 0.93054 (9) | 0.09030 (12) | 0.0548 (5) | |
N1 | 1.0571 (5) | 0.89549 (10) | 0.25399 (15) | 0.0508 (6) | |
C8 | 0.8394 (6) | 0.82440 (13) | 0.10509 (18) | 0.0471 (6) | |
C7 | 1.0044 (6) | 0.88277 (13) | 0.15444 (18) | 0.0472 (6) | |
C13 | 0.6743 (6) | 0.77900 (13) | 0.16499 (19) | 0.0522 (7) | |
H13 | 0.6617 | 0.7882 | 0.2360 | 0.063* | |
C11 | 0.5492 (6) | 0.70536 (14) | 0.01598 (19) | 0.0511 (7) | |
C1 | 1.2748 (6) | 0.97814 (13) | 0.15893 (18) | 0.0488 (7) | |
N2 | 0.4179 (7) | 0.64627 (14) | −0.02632 (19) | 0.0746 (8) | |
H2B | 0.430 (7) | 0.6376 (13) | −0.0924 (9) | 0.090 (1)* | |
H2A | 0.300 (6) | 0.6220 (12) | 0.0115 (19) | 0.090 (1)* | |
C6 | 1.2309 (6) | 0.95673 (13) | 0.25916 (18) | 0.0487 (7) | |
C12 | 0.5301 (6) | 0.72124 (13) | 0.1221 (2) | 0.0561 (7) | |
H12 | 0.4183 | 0.6923 | 0.1638 | 0.067* | |
C9 | 0.8540 (6) | 0.80871 (14) | −0.00072 (18) | 0.0529 (7) | |
H9 | 0.9622 | 0.8382 | −0.0428 | 0.064* | |
C2 | 1.4362 (7) | 1.03717 (14) | 0.1363 (2) | 0.0630 (8) | |
H2 | 1.4620 | 1.0504 | 0.0676 | 0.076* | |
C5 | 1.3567 (7) | 0.99539 (15) | 0.3444 (2) | 0.0615 (8) | |
H5 | 1.3315 | 0.9819 | 0.4130 | 0.074* | |
C10 | 0.7122 (6) | 0.75067 (14) | −0.04423 (19) | 0.0556 (7) | |
H10 | 0.7254 | 0.7415 | −0.1152 | 0.067* | |
C3 | 1.5567 (7) | 1.07529 (15) | 0.2214 (2) | 0.0664 (8) | |
H3 | 1.6650 | 1.1159 | 0.2103 | 0.080* | |
C4 | 1.5205 (7) | 1.05458 (16) | 0.3237 (2) | 0.0640 (8) | |
H4 | 1.6088 | 1.0812 | 0.3795 | 0.077* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0637 (12) | 0.0592 (12) | 0.0423 (10) | 0.0044 (9) | 0.0097 (8) | 0.0024 (9) |
N1 | 0.0542 (13) | 0.0567 (15) | 0.0422 (12) | 0.0052 (11) | 0.0075 (9) | 0.0029 (10) |
C8 | 0.0499 (15) | 0.0475 (16) | 0.0443 (14) | 0.0116 (12) | 0.0062 (11) | 0.0034 (12) |
C7 | 0.0491 (15) | 0.0520 (17) | 0.0419 (14) | 0.0135 (13) | 0.0115 (11) | 0.0073 (12) |
C13 | 0.0545 (16) | 0.0579 (19) | 0.0453 (15) | 0.0110 (14) | 0.0119 (12) | −0.0013 (13) |
C11 | 0.0529 (16) | 0.0502 (17) | 0.0502 (15) | 0.0121 (13) | 0.0053 (12) | −0.0028 (13) |
C1 | 0.0528 (16) | 0.0470 (16) | 0.0469 (15) | 0.0099 (13) | 0.0059 (11) | −0.0013 (12) |
N2 | 0.097 (2) | 0.0717 (19) | 0.0584 (15) | −0.0086 (15) | 0.0221 (14) | −0.0112 (14) |
C6 | 0.0493 (15) | 0.0537 (17) | 0.0439 (14) | 0.0127 (13) | 0.0082 (11) | 0.0023 (12) |
C12 | 0.0601 (17) | 0.0587 (19) | 0.0518 (16) | 0.0057 (14) | 0.0173 (13) | 0.0044 (13) |
C9 | 0.0594 (17) | 0.0594 (18) | 0.0410 (14) | 0.0089 (14) | 0.0103 (11) | 0.0072 (12) |
C2 | 0.071 (2) | 0.063 (2) | 0.0568 (17) | 0.0044 (16) | 0.0167 (14) | 0.0039 (15) |
C5 | 0.0651 (18) | 0.072 (2) | 0.0468 (16) | 0.0091 (16) | 0.0051 (13) | −0.0044 (14) |
C10 | 0.0680 (18) | 0.0591 (19) | 0.0408 (14) | 0.0067 (15) | 0.0111 (13) | −0.0006 (13) |
C3 | 0.067 (2) | 0.063 (2) | 0.070 (2) | −0.0023 (15) | 0.0143 (15) | −0.0052 (16) |
C4 | 0.0577 (18) | 0.069 (2) | 0.0643 (19) | 0.0032 (16) | 0.0024 (14) | −0.0143 (15) |
O1—C7 | 1.374 (3) | N2—H2B | 0.868 (10) |
O1—C1 | 1.379 (3) | N2—H2A | 0.859 (10) |
N1—C7 | 1.294 (3) | C6—C5 | 1.387 (3) |
N1—C6 | 1.395 (3) | C12—H12 | 0.9300 |
C8—C13 | 1.392 (3) | C9—C10 | 1.372 (3) |
C8—C9 | 1.392 (3) | C9—H9 | 0.9300 |
C8—C7 | 1.445 (4) | C2—C3 | 1.373 (4) |
C13—C12 | 1.368 (3) | C2—H2 | 0.9300 |
C13—H13 | 0.9300 | C5—C4 | 1.379 (4) |
C11—N2 | 1.367 (4) | C5—H5 | 0.9300 |
C11—C10 | 1.388 (3) | C10—H10 | 0.9300 |
C11—C12 | 1.399 (3) | C3—C4 | 1.389 (4) |
C1—C6 | 1.374 (3) | C3—H3 | 0.9300 |
C1—C2 | 1.378 (4) | C4—H4 | 0.9300 |
C7—O1—C1 | 104.26 (18) | C5—C6—N1 | 131.3 (2) |
C7—N1—C6 | 104.6 (2) | C13—C12—C11 | 120.6 (2) |
C13—C8—C9 | 117.4 (2) | C13—C12—H12 | 119.7 |
C13—C8—C7 | 120.0 (2) | C11—C12—H12 | 119.7 |
C9—C8—C7 | 122.4 (2) | C10—C9—C8 | 121.4 (2) |
N1—C7—O1 | 114.6 (2) | C10—C9—H9 | 119.3 |
N1—C7—C8 | 127.7 (2) | C8—C9—H9 | 119.3 |
O1—C7—C8 | 117.7 (2) | C3—C2—C1 | 115.9 (3) |
C12—C13—C8 | 121.7 (2) | C3—C2—H2 | 122.0 |
C12—C13—H13 | 119.2 | C1—C2—H2 | 122.0 |
C8—C13—H13 | 119.2 | C4—C5—C6 | 117.5 (2) |
N2—C11—C10 | 121.1 (2) | C4—C5—H5 | 121.2 |
N2—C11—C12 | 121.0 (2) | C6—C5—H5 | 121.2 |
C10—C11—C12 | 117.9 (2) | C9—C10—C11 | 121.0 (2) |
C6—C1—C2 | 123.9 (2) | C9—C10—H10 | 119.5 |
C6—C1—O1 | 107.4 (2) | C11—C10—H10 | 119.5 |
C2—C1—O1 | 128.7 (2) | C2—C3—C4 | 121.6 (3) |
C11—N2—H2B | 119.6 (19) | C2—C3—H3 | 119.2 |
C11—N2—H2A | 118 (2) | C4—C3—H3 | 119.2 |
H2B—N2—H2A | 122 (3) | C5—C4—C3 | 121.5 (3) |
C1—C6—C5 | 119.5 (3) | C5—C4—H4 | 119.3 |
C1—C6—N1 | 109.2 (2) | C3—C4—H4 | 119.3 |
C6—N1—C7—O1 | 0.1 (3) | C7—N1—C6—C5 | −179.6 (3) |
C6—N1—C7—C8 | 178.5 (2) | C8—C13—C12—C11 | 1.1 (4) |
C1—O1—C7—N1 | −0.1 (3) | N2—C11—C12—C13 | 177.1 (3) |
C1—O1—C7—C8 | −178.7 (2) | C10—C11—C12—C13 | −1.4 (4) |
C13—C8—C7—N1 | 9.5 (4) | C13—C8—C9—C10 | −0.2 (4) |
C9—C8—C7—N1 | −166.4 (2) | C7—C8—C9—C10 | 175.9 (2) |
C13—C8—C7—O1 | −172.1 (2) | C6—C1—C2—C3 | 0.1 (4) |
C9—C8—C7—O1 | 12.0 (3) | O1—C1—C2—C3 | 179.7 (2) |
C9—C8—C13—C12 | −0.3 (4) | C1—C6—C5—C4 | 0.4 (4) |
C7—C8—C13—C12 | −176.4 (2) | N1—C6—C5—C4 | 179.9 (2) |
C7—O1—C1—C6 | 0.1 (2) | C8—C9—C10—C11 | −0.1 (4) |
C7—O1—C1—C2 | −179.6 (2) | N2—C11—C10—C9 | −177.6 (3) |
C2—C1—C6—C5 | −0.7 (4) | C12—C11—C10—C9 | 0.9 (4) |
O1—C1—C6—C5 | 179.6 (2) | C1—C2—C3—C4 | 0.9 (4) |
C2—C1—C6—N1 | 179.7 (2) | C6—C5—C4—C3 | 0.5 (4) |
O1—C1—C6—N1 | 0.0 (3) | C2—C3—C4—C5 | −1.2 (4) |
C7—N1—C6—C1 | −0.1 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2B···N1i | 0.87 (1) | 2.17 (1) | 3.028 (3) | 168 (3) |
Symmetry code: (i) x−1/2, −y+3/2, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | C13H10N2O |
Mr | 210.23 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 298 |
a, b, c (Å) | 4.1461 (3), 19.5420 (12), 12.7705 (8) |
β (°) | 95.243 (1) |
V (Å3) | 1030.38 (12) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.30 × 0.20 × 0.15 |
Data collection | |
Diffractometer | Bruker SMART CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2003) |
Tmin, Tmax | 0.974, 0.987 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4628, 1902, 1315 |
Rint | 0.086 |
(sin θ/λ)max (Å−1) | 0.606 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.065, 0.151, 1.09 |
No. of reflections | 1902 |
No. of parameters | 151 |
No. of restraints | 2 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.17, −0.22 |
Computer programs: SMART (Bruker, 2001), SAINT-Plus (Bruker, 2001), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2B···N1i | 0.868 (10) | 2.174 (12) | 3.028 (3) | 168 (3) |
Symmetry code: (i) x−1/2, −y+3/2, z−1/2. |
References
Bruker (2001). SAINT-Plus and SMART. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Prudhomme, M., Guyot, J. & Jeminet, G. (1986). J. Antibiot. 39, 934–937. CrossRef CAS PubMed Web of Science Google Scholar
Sheldrick, G. M. (2003). SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Vinsova, J., Horak, V., Buchta, V. & Kaustova, J. (2005). Molecules, 10, 783–793. Web of Science CrossRef PubMed CAS Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The benzoxazole rings sytem is one of the most common heterocycles in medicinal chemistry. Previous reports revealed that substituted benzoxazoles possess diverse chemotherapeutic activities including antibiotic, antimicrobial, antiviral and antitumor activities (Prudhomme et al., 1986; Vinsova et al., 2005). With this mind, the title compound, (I), was prepared in a series of syntheses to produce new benzoxazole derivatives, and we report the crystal stucture herein.
The molecular structure of (I) is illustrated in Fig. 1. In (I), the benzixazole rings system is not co-planar with the benzene ring, the dihedral angle being 11.8 (1)°. In the crystal structure, molecules are linked by N2—H2B···N1i hydrogen bonds (symmetry code: (i) x -1/2, 3/2 - y, z - 1/2) into a one-dimensional chains along [101] (Fig. 2). Neighbouring chains are further linked into a two-dimensional network by π..π interactions with Cg1···Cg2(-1+x, y, z) = 3.6560 (15) Å where Cg1 and Cg2 are the centroids defined by the ring atoms O1/C1/C6/N1/C7 and C1-C6 respectivley. There are no significant interactions between the adjacent layers.