metal-organic compounds
Pentakis(2-oxo-2,3-dihydropyrimidin-1-ium) di-μ3-chlorido-tri-μ2-chlorido-hexachloridotricadmate(II)
aSchool of Chemistry, University of Bristol, Bristol BS8 1TS, England
*Correspondence e-mail: guy.orpen@bris.ac.uk
The title compound, (C4H5N2O)5[Cd3Cl11], was obtained from the reaction of 2-hydroxypyrimidine hydrochloride and cadmium(II) chloride in concentrated HCl solution. The consists of planar 2-oxo-1,2-dihydropyrimidin-3-ium cations with both N atoms protonated and the O atom unprotonated, and a complex trinuclear [Cd3Cl11]5− anion of approximately D3h symmetry, which has a triangle of three octahedrally coordinated CdII centres bonded to 11 chloride ions. Three of the chloride ions bridge adjacent Cd atoms, two cap the faces of the Cd3 triangle and the remaining six are terminally bonded and act as hydrogen-bond acceptors. Various N—H⋯Cl hydrogen bonds connect the anions and cations and, in addition, intermolecular N—H⋯O hydrogen bonds contribute to the formation of a three-dimensional network.
Related literature
A related salt of the same anion in the orthorhombic 3)2NH2]+ cations (Waśkowska et al., 1990), while Furberg & Aas (1975) described the structure of the same cation as its chloride salt.
has been reported with [(CHExperimental
Crystal data
|
Refinement
|
|
Data collection: CrysAlis CCD (Oxford Diffraction, 2007); cell CrysAlis RED (Oxford Diffraction, 2007); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S160053680801862X/lh2641sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053680801862X/lh2641Isup2.hkl
The title compound was obtained from an attempt to synthesize bis-2-hydroxypyrimidinium tetrachlorocadmate(II). 2-hydroxypyrimidine hydrochloride and cadmium(II) chloride in a 2:1 molar ratio were dissolved in concentrated hydrochloric acid solution. This was left to evaporate slowly at room temperature and resulted in the formation of needle-shaped colourless crystals.
H atoms were positioned geometrically and refined using a riding model, with C—H = 0.93 Å and N—H = 0.86 Å and Uiso(H) = 1.2 times Ueq(C, N).
Data collection: CrysAlis CCD (Oxford Diffraction, 2007); cell
CrysAlis RED (Oxford Diffraction, 2007); data reduction: CrysAlis RED (Oxford Diffraction, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure of I with atom labels and 50% probability displacement ellipsoids for non-H atoms. | |
Fig. 2. Geometry of the [Cd3Cl11]5- anion. | |
Fig. 3. Hydrogen bond (dotted lines) environment around the [Cd3Cl11]5-anion. |
C4H5N2O)5[Cd3Cl11] | F(000) = 2344 |
Mr = 1212.65 | Dx = 2.156 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 28683 reflections |
a = 17.5446 (2) Å | θ = 2.3–30.0° |
b = 8.08980 (2) Å | µ = 2.53 mm−1 |
c = 27.2451 (6) Å | T = 100 K |
β = 104.9470 (2)° | Needle, colourless |
V = 3736.12 (10) Å3 | 0.51 × 0.07 × 0.04 mm |
Z = 4 |
Oxford Diffraction Gemini-R Ultra diffractometer | 10979 independent reflections |
Radiation source: fine-focus sealed tube | 7919 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.046 |
Detector resolution: 10.4752 pixels mm-1 | θmax = 30.1°, θmin = 2.4° |
1° width ω scans | h = −15→24 |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2007) | k = −11→11 |
Tmin = 0.522, Tmax = 0.91 | l = −38→38 |
65985 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.025 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.058 | H-atom parameters constrained |
S = 0.96 | w = 1/[σ2(Fo2) + (0.0307P)2] where P = (Fo2 + 2Fc2)/3 |
10979 reflections | (Δ/σ)max = 0.001 |
442 parameters | Δρmax = 0.99 e Å−3 |
0 restraints | Δρmin = −1.09 e Å−3 |
C4H5N2O)5[Cd3Cl11] | V = 3736.12 (10) Å3 |
Mr = 1212.65 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 17.5446 (2) Å | µ = 2.53 mm−1 |
b = 8.08980 (2) Å | T = 100 K |
c = 27.2451 (6) Å | 0.51 × 0.07 × 0.04 mm |
β = 104.9470 (2)° |
Oxford Diffraction Gemini-R Ultra diffractometer | 10979 independent reflections |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2007) | 7919 reflections with I > 2σ(I) |
Tmin = 0.522, Tmax = 0.91 | Rint = 0.046 |
65985 measured reflections |
R[F2 > 2σ(F2)] = 0.025 | 0 restraints |
wR(F2) = 0.058 | H-atom parameters constrained |
S = 0.96 | Δρmax = 0.99 e Å−3 |
10979 reflections | Δρmin = −1.09 e Å−3 |
442 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cd1 | 0.278566 (10) | 0.40453 (2) | 0.234610 (6) | 0.01260 (4) | |
Cd2 | 0.096112 (10) | 0.34002 (2) | 0.139514 (6) | 0.01313 (4) | |
Cd3 | 0.278973 (10) | 0.37558 (2) | 0.104602 (6) | 0.01268 (4) | |
Cl1 | 0.31283 (3) | 0.64928 (8) | 0.29430 (2) | 0.01631 (13) | |
Cl2 | 0.34187 (4) | 0.18017 (8) | 0.29589 (2) | 0.01652 (13) | |
Cl3 | 0.12927 (3) | 0.36223 (8) | 0.24084 (2) | 0.01473 (12) | |
Cl4 | 0.20555 (3) | 0.59016 (7) | 0.15423 (2) | 0.01321 (12) | |
Cl5 | 0.39418 (3) | 0.42065 (8) | 0.18691 (2) | 0.01426 (12) | |
Cl6 | 0.22670 (3) | 0.15581 (7) | 0.16419 (2) | 0.01246 (11) | |
Cl7 | 0.31718 (4) | 0.59045 (8) | 0.04703 (2) | 0.01607 (12) | |
Cl8 | 0.33408 (3) | 0.13362 (8) | 0.06752 (2) | 0.01601 (12) | |
Cl9 | 0.13161 (3) | 0.33560 (8) | 0.04770 (2) | 0.01508 (12) | |
Cl10 | −0.01624 (3) | 0.54066 (8) | 0.11041 (2) | 0.01515 (12) | |
Cl11 | 0.00531 (3) | 0.09258 (8) | 0.12829 (2) | 0.01516 (12) | |
N1 | 0.17631 (12) | 0.9564 (3) | 0.27179 (8) | 0.0163 (4) | |
H1A | 0.2120 | 1.0282 | 0.2707 | 0.020* | |
N2 | 0.10684 (12) | 0.8001 (3) | 0.31601 (8) | 0.0177 (5) | |
H2A | 0.0971 | 0.7685 | 0.3439 | 0.021* | |
N3 | 0.19690 (13) | 0.9043 (3) | 0.01223 (8) | 0.0202 (5) | |
H3A | 0.2383 | 0.9631 | 0.0138 | 0.024* | |
N4 | 0.10513 (11) | 0.7144 (3) | −0.02736 (7) | 0.0140 (4) | |
H4A | 0.0860 | 0.6475 | −0.0520 | 0.017* | |
N5 | 0.57141 (12) | 0.1754 (3) | 0.87043 (8) | 0.0174 (5) | |
H5A | 0.5851 | 0.2418 | 0.8958 | 0.021* | |
N6 | 0.48648 (12) | −0.0147 (3) | 0.82295 (7) | 0.0172 (5) | |
H6A | 0.4442 | −0.0732 | 0.8171 | 0.021* | |
N7 | 0.35772 (12) | 0.7374 (3) | 0.92554 (8) | 0.0194 (5) | |
H7A | 0.3084 | 0.7532 | 0.9232 | 0.023* | |
N8 | 0.48815 (14) | 0.7805 (3) | 0.96474 (10) | 0.0385 (7) | |
H8A | 0.5249 | 0.8278 | 0.9875 | 0.046* | |
N9 | 0.30200 (12) | 0.1727 (3) | 0.89707 (8) | 0.0199 (5) | |
H9B | 0.3412 | 0.1411 | 0.8859 | 0.024* | |
N10 | 0.25130 (13) | 0.3093 (3) | 0.95573 (8) | 0.0214 (5) | |
H10B | 0.2572 | 0.3686 | 0.9827 | 0.026* | |
O1 | 0.20540 (11) | 0.9741 (2) | 0.35816 (6) | 0.0235 (4) | |
O2 | 0.20021 (11) | 0.7968 (3) | −0.06516 (7) | 0.0250 (4) | |
O3 | 0.46339 (11) | 0.0904 (3) | 0.89546 (7) | 0.0282 (5) | |
O4 | 0.39372 (14) | 0.9435 (3) | 0.98438 (8) | 0.0467 (7) | |
O5 | 0.38187 (11) | 0.3297 (3) | 0.95908 (7) | 0.0270 (5) | |
C1 | 0.06351 (14) | 0.7355 (3) | 0.27248 (9) | 0.0174 (5) | |
H1B | 0.0246 | 0.6583 | 0.2734 | 0.021* | |
C2 | 0.07546 (15) | 0.7811 (3) | 0.22687 (9) | 0.0172 (5) | |
H2B | 0.0450 | 0.7379 | 0.1965 | 0.021* | |
C3 | 0.13409 (15) | 0.8928 (3) | 0.22769 (9) | 0.0173 (5) | |
H3B | 0.1448 | 0.9251 | 0.1974 | 0.021* | |
C4 | 0.16646 (14) | 0.9148 (3) | 0.31878 (9) | 0.0166 (5) | |
C5 | 0.16286 (17) | 0.9166 (3) | 0.05050 (10) | 0.0244 (6) | |
H5B | 0.1841 | 0.9873 | 0.0775 | 0.029* | |
C6 | 0.09702 (16) | 0.8263 (3) | 0.05048 (10) | 0.0223 (6) | |
H6B | 0.0723 | 0.8347 | 0.0767 | 0.027* | |
C7 | 0.06914 (15) | 0.7229 (3) | 0.01003 (9) | 0.0183 (6) | |
H7B | 0.0248 | 0.6582 | 0.0087 | 0.022* | |
C8 | 0.17070 (14) | 0.8045 (3) | −0.02962 (9) | 0.0158 (5) | |
C9 | 0.53129 (14) | −0.0260 (3) | 0.79005 (9) | 0.0178 (5) | |
H9A | 0.5166 | −0.0976 | 0.7625 | 0.021* | |
C10 | 0.59844 (15) | 0.0668 (3) | 0.79652 (10) | 0.0193 (6) | |
H10A | 0.6296 | 0.0616 | 0.7736 | 0.023* | |
C11 | 0.61754 (15) | 0.1676 (3) | 0.83830 (10) | 0.0186 (6) | |
H11A | 0.6631 | 0.2314 | 0.8444 | 0.022* | |
C12 | 0.50373 (14) | 0.0846 (3) | 0.86560 (9) | 0.0177 (5) | |
C13 | 0.37700 (16) | 0.6242 (3) | 0.89528 (10) | 0.0208 (6) | |
H13A | 0.3375 | 0.5698 | 0.8714 | 0.025* | |
C14 | 0.45477 (15) | 0.5872 (3) | 0.89906 (10) | 0.0194 (6) | |
H14A | 0.4693 | 0.5128 | 0.8771 | 0.023* | |
C15 | 0.50936 (16) | 0.6647 (4) | 0.93653 (11) | 0.0263 (6) | |
H15A | 0.5623 | 0.6360 | 0.9424 | 0.032* | |
C16 | 0.41168 (17) | 0.8310 (4) | 0.96040 (10) | 0.0271 (7) | |
C17 | 0.23033 (16) | 0.1194 (3) | 0.87278 (10) | 0.0205 (6) | |
H17A | 0.2239 | 0.0543 | 0.8439 | 0.025* | |
C18 | 0.16560 (15) | 0.1604 (3) | 0.89027 (10) | 0.0202 (6) | |
H18A | 0.1152 | 0.1243 | 0.8738 | 0.024* | |
C19 | 0.17895 (16) | 0.2565 (4) | 0.93296 (9) | 0.0222 (6) | |
H19A | 0.1370 | 0.2852 | 0.9463 | 0.027* | |
C20 | 0.31738 (16) | 0.2755 (3) | 0.93906 (9) | 0.0181 (6) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cd1 | 0.01208 (9) | 0.01435 (10) | 0.01056 (8) | −0.00011 (7) | 0.00147 (6) | −0.00025 (7) |
Cd2 | 0.00896 (8) | 0.01588 (10) | 0.01383 (8) | 0.00031 (7) | 0.00164 (6) | 0.00023 (7) |
Cd3 | 0.01154 (8) | 0.01546 (10) | 0.01122 (8) | 0.00016 (7) | 0.00326 (6) | −0.00117 (7) |
Cl1 | 0.0137 (3) | 0.0161 (3) | 0.0176 (3) | 0.0018 (2) | 0.0013 (2) | −0.0036 (2) |
Cl2 | 0.0193 (3) | 0.0164 (3) | 0.0130 (3) | 0.0026 (3) | 0.0026 (2) | 0.0012 (2) |
Cl3 | 0.0128 (3) | 0.0178 (3) | 0.0141 (3) | 0.0005 (2) | 0.0043 (2) | −0.0001 (2) |
Cl4 | 0.0125 (3) | 0.0129 (3) | 0.0139 (3) | 0.0005 (2) | 0.0026 (2) | 0.0000 (2) |
Cl5 | 0.0106 (3) | 0.0175 (3) | 0.0140 (3) | −0.0005 (2) | 0.0020 (2) | −0.0003 (2) |
Cl6 | 0.0109 (3) | 0.0132 (3) | 0.0132 (3) | 0.0000 (2) | 0.0029 (2) | 0.0001 (2) |
Cl7 | 0.0183 (3) | 0.0148 (3) | 0.0151 (3) | 0.0004 (2) | 0.0044 (2) | 0.0003 (2) |
Cl8 | 0.0148 (3) | 0.0164 (3) | 0.0171 (3) | 0.0018 (2) | 0.0044 (2) | −0.0028 (2) |
Cl9 | 0.0128 (3) | 0.0192 (3) | 0.0122 (3) | 0.0010 (2) | 0.0014 (2) | −0.0006 (2) |
Cl10 | 0.0121 (3) | 0.0149 (3) | 0.0167 (3) | 0.0013 (2) | 0.0004 (2) | −0.0023 (2) |
Cl11 | 0.0124 (3) | 0.0158 (3) | 0.0174 (3) | −0.0011 (2) | 0.0041 (2) | −0.0009 (2) |
N1 | 0.0155 (11) | 0.0148 (12) | 0.0193 (10) | 0.0001 (9) | 0.0058 (8) | 0.0014 (9) |
N2 | 0.0215 (11) | 0.0188 (12) | 0.0155 (10) | −0.0007 (10) | 0.0095 (9) | 0.0029 (9) |
N3 | 0.0180 (11) | 0.0158 (12) | 0.0224 (11) | −0.0052 (10) | −0.0028 (9) | 0.0014 (9) |
N4 | 0.0133 (10) | 0.0129 (11) | 0.0137 (10) | −0.0021 (9) | −0.0005 (8) | −0.0041 (8) |
N5 | 0.0152 (10) | 0.0155 (12) | 0.0204 (11) | 0.0013 (9) | 0.0024 (8) | −0.0062 (9) |
N6 | 0.0107 (10) | 0.0170 (12) | 0.0218 (11) | −0.0033 (9) | 0.0004 (8) | 0.0002 (9) |
N7 | 0.0116 (11) | 0.0247 (13) | 0.0230 (11) | 0.0047 (10) | 0.0067 (9) | 0.0073 (10) |
N8 | 0.0214 (13) | 0.0430 (18) | 0.0395 (15) | 0.0115 (12) | −0.0130 (11) | −0.0242 (13) |
N9 | 0.0182 (11) | 0.0278 (14) | 0.0164 (10) | 0.0039 (10) | 0.0095 (9) | 0.0017 (9) |
N10 | 0.0244 (12) | 0.0274 (14) | 0.0120 (10) | 0.0092 (10) | 0.0041 (9) | 0.0011 (9) |
O1 | 0.0232 (10) | 0.0269 (12) | 0.0175 (9) | 0.0033 (9) | 0.0002 (8) | −0.0045 (8) |
O2 | 0.0215 (10) | 0.0322 (12) | 0.0257 (10) | 0.0090 (9) | 0.0138 (8) | 0.0066 (9) |
O3 | 0.0150 (9) | 0.0482 (14) | 0.0220 (10) | 0.0036 (9) | 0.0062 (8) | 0.0005 (9) |
O4 | 0.0540 (15) | 0.0569 (17) | 0.0251 (11) | 0.0315 (13) | 0.0029 (10) | −0.0153 (11) |
O5 | 0.0220 (10) | 0.0318 (13) | 0.0243 (10) | −0.0029 (9) | 0.0009 (8) | 0.0046 (9) |
C1 | 0.0132 (12) | 0.0152 (14) | 0.0250 (13) | −0.0021 (10) | 0.0072 (10) | −0.0005 (11) |
C2 | 0.0183 (13) | 0.0166 (14) | 0.0160 (12) | −0.0004 (11) | 0.0032 (10) | −0.0023 (10) |
C3 | 0.0202 (13) | 0.0176 (14) | 0.0156 (12) | 0.0047 (11) | 0.0074 (10) | 0.0036 (10) |
C4 | 0.0136 (12) | 0.0161 (14) | 0.0206 (13) | 0.0066 (11) | 0.0055 (10) | 0.0007 (10) |
C5 | 0.0366 (17) | 0.0191 (15) | 0.0124 (12) | 0.0078 (13) | −0.0029 (11) | −0.0016 (11) |
C6 | 0.0273 (15) | 0.0253 (16) | 0.0162 (12) | 0.0102 (13) | 0.0088 (11) | 0.0034 (11) |
C7 | 0.0118 (12) | 0.0224 (15) | 0.0210 (13) | 0.0002 (11) | 0.0046 (10) | 0.0069 (11) |
C8 | 0.0121 (12) | 0.0182 (14) | 0.0163 (12) | 0.0056 (10) | 0.0019 (9) | 0.0049 (10) |
C9 | 0.0174 (13) | 0.0157 (14) | 0.0177 (12) | 0.0039 (11) | −0.0006 (10) | 0.0002 (10) |
C10 | 0.0150 (12) | 0.0234 (15) | 0.0203 (13) | 0.0057 (11) | 0.0059 (10) | 0.0047 (11) |
C11 | 0.0123 (12) | 0.0131 (14) | 0.0299 (14) | 0.0010 (10) | 0.0044 (10) | 0.0057 (11) |
C12 | 0.0112 (12) | 0.0216 (15) | 0.0196 (12) | 0.0039 (11) | 0.0027 (10) | 0.0015 (11) |
C13 | 0.0200 (13) | 0.0154 (14) | 0.0231 (13) | −0.0053 (11) | −0.0014 (11) | 0.0016 (11) |
C14 | 0.0221 (14) | 0.0160 (14) | 0.0226 (13) | 0.0025 (12) | 0.0102 (11) | −0.0023 (11) |
C15 | 0.0131 (13) | 0.0232 (16) | 0.0406 (17) | 0.0018 (12) | 0.0034 (12) | −0.0038 (13) |
C16 | 0.0226 (14) | 0.0389 (19) | 0.0178 (13) | 0.0130 (14) | 0.0017 (11) | −0.0045 (13) |
C17 | 0.0234 (14) | 0.0221 (16) | 0.0148 (12) | 0.0022 (12) | 0.0026 (10) | 0.0006 (11) |
C18 | 0.0175 (13) | 0.0200 (15) | 0.0223 (13) | 0.0027 (11) | 0.0039 (10) | 0.0049 (11) |
C19 | 0.0208 (14) | 0.0291 (17) | 0.0181 (13) | 0.0077 (12) | 0.0078 (11) | 0.0071 (12) |
C20 | 0.0223 (14) | 0.0182 (15) | 0.0142 (12) | 0.0035 (12) | 0.0051 (10) | 0.0064 (10) |
Cd1—Cl2 | 2.5216 (6) | N8—C16 | 1.378 (4) |
Cd1—Cl1 | 2.5343 (6) | N8—H8A | 0.8600 |
Cd1—Cl5 | 2.6796 (6) | N9—C17 | 1.332 (3) |
Cd1—Cl3 | 2.6900 (6) | N9—C20 | 1.383 (3) |
Cd1—Cl4 | 2.6917 (6) | N9—H9B | 0.8600 |
Cd1—Cl6 | 2.7670 (6) | N10—C19 | 1.331 (3) |
Cd2—Cl10 | 2.5184 (6) | N10—C20 | 1.377 (3) |
Cd2—Cl11 | 2.5273 (6) | N10—H10B | 0.8600 |
Cd2—Cl6 | 2.6698 (6) | O1—C4 | 1.212 (3) |
Cd2—Cl3 | 2.6766 (6) | O2—C8 | 1.212 (3) |
Cd2—Cl9 | 2.7295 (6) | O3—C12 | 1.209 (3) |
Cd2—Cl4 | 2.7468 (6) | O4—C16 | 1.209 (3) |
Cd3—Cl8 | 2.5081 (6) | O5—C20 | 1.205 (3) |
Cd3—Cl7 | 2.5444 (6) | C1—C2 | 1.363 (3) |
Cd3—Cl5 | 2.6284 (6) | C1—H1B | 0.9300 |
Cd3—Cl9 | 2.6692 (6) | C2—C3 | 1.365 (4) |
Cd3—Cl4 | 2.7201 (6) | C2—H2B | 0.9300 |
Cd3—Cl6 | 2.7214 (6) | C3—H3B | 0.9300 |
N1—C3 | 1.341 (3) | C5—C6 | 1.367 (4) |
N1—C4 | 1.377 (3) | C5—H5B | 0.9300 |
N1—H1A | 0.8600 | C6—C7 | 1.369 (4) |
N2—C1 | 1.339 (3) | C6—H6B | 0.9300 |
N2—C4 | 1.386 (3) | C7—H7B | 0.9300 |
N2—H2A | 0.8600 | C9—C10 | 1.369 (4) |
N3—C5 | 1.332 (3) | C9—H9A | 0.9300 |
N3—C8 | 1.376 (3) | C10—C11 | 1.370 (4) |
N3—H3A | 0.8600 | C10—H10A | 0.9300 |
N4—C7 | 1.332 (3) | C11—H11A | 0.9300 |
N4—C8 | 1.377 (3) | C12—O3 | 1.209 (3) |
N4—H4A | 0.8600 | C13—C14 | 1.375 (4) |
N5—C11 | 1.338 (3) | C13—H13A | 0.9300 |
N5—C12 | 1.373 (3) | C14—C15 | 1.359 (4) |
N5—H5A | 0.8600 | C14—H14A | 0.9300 |
N6—C9 | 1.339 (3) | C15—H15A | 0.9300 |
N6—C12 | 1.381 (3) | C17—C18 | 1.381 (4) |
N6—H6A | 0.8600 | C17—H17A | 0.9300 |
N7—C13 | 1.333 (3) | C18—C19 | 1.368 (4) |
N7—C16 | 1.381 (4) | C18—H18A | 0.9300 |
N7—H7A | 0.8600 | C19—H19A | 0.9300 |
N8—C15 | 1.325 (4) | ||
Cl2—Cd1—Cl1 | 98.42 (2) | C13—N7—H7A | 117.8 |
Cl2—Cd1—Cl5 | 95.56 (2) | C16—N7—H7A | 117.8 |
Cl1—Cd1—Cl5 | 100.91 (2) | C15—N8—C16 | 124.9 (2) |
Cl2—Cd1—Cl3 | 97.84 (2) | C15—N8—H8A | 117.5 |
Cl1—Cd1—Cl3 | 97.61 (2) | C16—N8—H8A | 117.5 |
Cl5—Cd1—Cl3 | 155.233 (18) | C17—N9—C20 | 124.3 (2) |
Cl2—Cd1—Cl4 | 167.47 (2) | C17—N9—H9B | 117.9 |
Cl1—Cd1—Cl4 | 94.048 (19) | C20—N9—H9B | 117.9 |
Cl5—Cd1—Cl4 | 80.744 (18) | C19—N10—C20 | 124.4 (2) |
Cl3—Cd1—Cl4 | 81.693 (18) | C19—N10—H10B | 117.8 |
Cl2—Cd1—Cl6 | 86.881 (19) | C20—N10—H10B | 117.8 |
Cl1—Cd1—Cl6 | 173.839 (19) | N2—C1—C2 | 121.1 (2) |
Cl5—Cd1—Cl6 | 81.593 (18) | N2—C1—H1B | 119.5 |
Cl3—Cd1—Cl6 | 78.455 (18) | C2—C1—H1B | 119.5 |
Cl4—Cd1—Cl6 | 80.746 (18) | C1—C2—C3 | 117.2 (2) |
Cl10—Cd2—Cl11 | 93.13 (2) | C1—C2—H2B | 121.4 |
Cl10—Cd2—Cl6 | 171.98 (2) | C3—C2—H2B | 121.4 |
Cl11—Cd2—Cl6 | 93.534 (19) | N1—C3—C2 | 120.6 (2) |
Cl10—Cd2—Cl3 | 103.046 (19) | N1—C3—H3B | 119.7 |
Cl11—Cd2—Cl3 | 98.080 (19) | C2—C3—H3B | 119.7 |
Cl6—Cd2—Cl3 | 80.420 (18) | O1—C4—N1 | 123.3 (2) |
Cl10—Cd2—Cl9 | 93.725 (19) | O1—C4—N2 | 124.0 (2) |
Cl11—Cd2—Cl9 | 99.466 (19) | N1—C4—N2 | 112.8 (2) |
Cl6—Cd2—Cl9 | 80.773 (18) | N3—C5—C6 | 120.6 (2) |
Cl3—Cd2—Cl9 | 154.942 (19) | N3—C5—H5B | 119.7 |
Cl10—Cd2—Cl4 | 91.835 (19) | C6—C5—H5B | 119.7 |
Cl11—Cd2—Cl4 | 175.033 (19) | C5—C6—C7 | 117.0 (2) |
Cl6—Cd2—Cl4 | 81.504 (18) | C5—C6—H6B | 121.5 |
Cl3—Cd2—Cl4 | 80.921 (18) | C7—C6—H6B | 121.5 |
Cl9—Cd2—Cl4 | 80.051 (18) | N4—C7—C6 | 120.4 (2) |
Cl8—Cd3—Cl7 | 95.43 (2) | N4—C7—H7B | 119.8 |
Cl8—Cd3—Cl5 | 99.23 (2) | C6—C7—H7B | 119.8 |
Cl7—Cd3—Cl5 | 99.457 (19) | O2—C8—N3 | 124.9 (2) |
Cl8—Cd3—Cl9 | 95.034 (19) | O2—C8—N4 | 122.8 (2) |
Cl7—Cd3—Cl9 | 95.419 (19) | N3—C8—N4 | 112.2 (2) |
Cl5—Cd3—Cl9 | 158.251 (19) | N6—C9—C10 | 120.7 (2) |
Cl8—Cd3—Cl4 | 168.35 (2) | N6—C9—H9A | 119.6 |
Cl7—Cd3—Cl4 | 95.99 (2) | C10—C9—H9A | 119.6 |
Cl5—Cd3—Cl4 | 81.139 (18) | C9—C10—C11 | 116.8 (2) |
Cl9—Cd3—Cl4 | 81.609 (18) | C9—C10—H10A | 121.6 |
Cl8—Cd3—Cl6 | 87.40 (2) | C11—C10—H10A | 121.6 |
Cl7—Cd3—Cl6 | 175.583 (19) | N5—C11—C10 | 120.8 (2) |
Cl5—Cd3—Cl6 | 83.393 (18) | N5—C11—H11A | 119.6 |
Cl9—Cd3—Cl6 | 80.932 (18) | C10—C11—H11A | 119.6 |
Cl4—Cd3—Cl6 | 81.067 (18) | O3—C12—N5 | 123.8 (2) |
Cd2—Cl3—Cd1 | 84.236 (18) | O3—C12—N5 | 123.8 (2) |
Cd1—Cl4—Cd3 | 82.031 (17) | O3—C12—N6 | 123.3 (2) |
Cd1—Cl4—Cd2 | 82.865 (17) | O3—C12—N6 | 123.3 (2) |
Cd3—Cl4—Cd2 | 81.961 (17) | N5—C12—N6 | 112.8 (2) |
Cd3—Cl5—Cd1 | 83.991 (17) | N7—C13—C14 | 120.6 (2) |
Cd2—Cl6—Cd3 | 83.364 (17) | N7—C13—H13A | 119.7 |
Cd2—Cl6—Cd1 | 82.884 (17) | C14—C13—H13A | 119.7 |
Cd3—Cl6—Cd1 | 80.645 (17) | C15—C14—C13 | 116.7 (3) |
Cd3—Cl9—Cd2 | 83.220 (16) | C15—C14—H14A | 121.6 |
C3—N1—C4 | 124.5 (2) | C13—C14—H14A | 121.6 |
C3—N1—H1A | 117.8 | N8—C15—C14 | 120.9 (3) |
C4—N1—H1A | 117.8 | N8—C15—H15A | 119.6 |
C1—N2—C4 | 123.9 (2) | C14—C15—H15A | 119.6 |
C1—N2—H2A | 118.0 | O4—C16—N8 | 124.1 (3) |
C4—N2—H2A | 118.0 | O4—C16—N7 | 123.8 (3) |
C5—N3—C8 | 124.8 (2) | N8—C16—N7 | 112.1 (2) |
C5—N3—H3A | 117.6 | N9—C17—C18 | 120.4 (2) |
C8—N3—H3A | 117.6 | N9—C17—H17A | 119.8 |
C7—N4—C8 | 125.0 (2) | C18—C17—H17A | 119.8 |
C7—N4—H4A | 117.5 | C19—C18—C17 | 117.0 (2) |
C8—N4—H4A | 117.5 | C19—C18—H18A | 121.5 |
C11—N5—C12 | 124.5 (2) | C17—C18—H18A | 121.5 |
C11—N5—H5A | 117.8 | N10—C19—C18 | 120.8 (2) |
C12—N5—H5A | 117.8 | N10—C19—H19A | 119.6 |
C9—N6—C12 | 124.3 (2) | C18—C19—H19A | 119.6 |
C9—N6—H6A | 117.8 | O5—C20—N10 | 123.4 (2) |
C12—N6—H6A | 117.8 | O5—C20—N9 | 123.6 (2) |
C13—N7—C16 | 124.3 (2) | N10—C20—N9 | 113.0 (2) |
Cl10—Cd2—Cl3—Cd1 | −129.506 (19) | Cl4—Cd3—Cl6—Cd1 | −42.320 (15) |
Cl11—Cd2—Cl3—Cd1 | 135.360 (19) | Cl2—Cd1—Cl6—Cd2 | 140.506 (19) |
Cl6—Cd2—Cl3—Cd1 | 43.114 (17) | Cl5—Cd1—Cl6—Cd2 | −123.400 (18) |
Cl9—Cd2—Cl3—Cd1 | 1.27 (5) | Cl3—Cd1—Cl6—Cd2 | 41.845 (17) |
Cl4—Cd2—Cl3—Cd1 | −39.720 (17) | Cl4—Cd1—Cl6—Cd2 | −41.486 (17) |
Cl2—Cd1—Cl3—Cd2 | −126.750 (19) | Cl2—Cd1—Cl6—Cd3 | −135.087 (19) |
Cl1—Cd1—Cl3—Cd2 | 133.608 (19) | Cl5—Cd1—Cl6—Cd3 | −38.993 (16) |
Cl5—Cd1—Cl3—Cd2 | −4.61 (5) | Cl3—Cd1—Cl6—Cd3 | 126.253 (18) |
Cl4—Cd1—Cl3—Cd2 | 40.601 (17) | Cl4—Cd1—Cl6—Cd3 | 42.921 (16) |
Cl6—Cd1—Cl3—Cd2 | −41.579 (16) | Cl8—Cd3—Cl9—Cd2 | 126.796 (19) |
Cl2—Cd1—Cl4—Cd3 | −33.55 (10) | Cl7—Cd3—Cl9—Cd2 | −137.247 (19) |
Cl1—Cd1—Cl4—Cd3 | 140.568 (18) | Cl5—Cd3—Cl9—Cd2 | −4.15 (6) |
Cl5—Cd1—Cl4—Cd3 | 40.154 (16) | Cl4—Cd3—Cl9—Cd2 | −41.973 (17) |
Cl3—Cd1—Cl4—Cd3 | −122.314 (18) | Cl6—Cd3—Cl9—Cd2 | 40.245 (17) |
Cl6—Cd1—Cl4—Cd3 | −42.750 (16) | Cl10—Cd2—Cl9—Cd3 | 132.909 (19) |
Cl2—Cd1—Cl4—Cd2 | 49.29 (10) | Cl11—Cd2—Cl9—Cd3 | −133.288 (18) |
Cl1—Cd1—Cl4—Cd2 | −136.601 (18) | Cl6—Cd2—Cl9—Cd3 | −41.211 (17) |
Cl5—Cd1—Cl4—Cd2 | 122.985 (18) | Cl3—Cd2—Cl9—Cd3 | 0.58 (5) |
Cl3—Cd1—Cl4—Cd2 | −39.483 (17) | Cl4—Cd2—Cl9—Cd3 | 41.697 (17) |
Cl6—Cd1—Cl4—Cd2 | 40.081 (16) | C4—N2—C1—C2 | −0.5 (4) |
Cl8—Cd3—Cl4—Cd1 | 51.69 (10) | N2—C1—C2—C3 | 1.0 (4) |
Cl7—Cd3—Cl4—Cd1 | −139.723 (17) | C4—N1—C3—C2 | 1.4 (4) |
Cl5—Cd3—Cl4—Cd1 | −41.047 (17) | C1—C2—C3—N1 | −1.5 (4) |
Cl9—Cd3—Cl4—Cd1 | 125.659 (19) | C3—N1—C4—O1 | −180.0 (2) |
Cl6—Cd3—Cl4—Cd1 | 43.596 (16) | C3—N1—C4—N2 | −0.8 (3) |
Cl8—Cd3—Cl4—Cd2 | −32.17 (10) | C1—N2—C4—O1 | 179.5 (2) |
Cl7—Cd3—Cl4—Cd2 | 136.413 (17) | C1—N2—C4—N1 | 0.3 (3) |
Cl5—Cd3—Cl4—Cd2 | −124.911 (18) | C8—N3—C5—C6 | 0.2 (4) |
Cl9—Cd3—Cl4—Cd2 | 41.795 (16) | N3—C5—C6—C7 | 0.8 (4) |
Cl6—Cd3—Cl4—Cd2 | −40.269 (15) | C8—N4—C7—C6 | −0.4 (4) |
Cl10—Cd2—Cl4—Cd1 | 142.739 (18) | C5—C6—C7—N4 | −0.7 (4) |
Cl6—Cd2—Cl4—Cd1 | −41.755 (16) | C5—N3—C8—O2 | 177.7 (2) |
Cl3—Cd2—Cl4—Cd1 | 39.818 (17) | C5—N3—C8—N4 | −1.2 (3) |
Cl9—Cd2—Cl4—Cd1 | −123.800 (18) | C7—N4—C8—O2 | −177.7 (2) |
Cl10—Cd2—Cl4—Cd3 | −134.350 (18) | C7—N4—C8—N3 | 1.3 (3) |
Cl6—Cd2—Cl4—Cd3 | 41.155 (16) | C12—N6—C9—C10 | −1.5 (4) |
Cl3—Cd2—Cl4—Cd3 | 122.729 (18) | N6—C9—C10—C11 | 1.1 (4) |
Cl9—Cd2—Cl4—Cd3 | −40.889 (16) | C12—N5—C11—C10 | 1.2 (4) |
Cl8—Cd3—Cl5—Cd1 | −127.150 (19) | C9—C10—C11—N5 | −1.0 (4) |
Cl7—Cd3—Cl5—Cd1 | 135.712 (19) | O3—O3—C12—N5 | 0.0 (7) |
Cl9—Cd3—Cl5—Cd1 | 3.19 (6) | O3—O3—C12—N6 | 0.0 (6) |
Cl4—Cd3—Cl5—Cd1 | 41.062 (17) | C11—N5—C12—O3 | 178.5 (2) |
Cl6—Cd3—Cl5—Cd1 | −40.881 (17) | C11—N5—C12—O3 | 178.5 (2) |
Cl2—Cd1—Cl5—Cd3 | 126.274 (19) | C11—N5—C12—N6 | −1.4 (3) |
Cl1—Cd1—Cl5—Cd3 | −134.022 (19) | C9—N6—C12—O3 | −178.3 (3) |
Cl3—Cd1—Cl5—Cd3 | 3.71 (5) | C9—N6—C12—O3 | −178.3 (3) |
Cl4—Cd1—Cl5—Cd3 | −41.648 (17) | C9—N6—C12—N5 | 1.5 (3) |
Cl6—Cd1—Cl5—Cd3 | 40.268 (17) | C16—N7—C13—C14 | 3.4 (4) |
Cl11—Cd2—Cl6—Cd3 | 139.268 (17) | N7—C13—C14—C15 | 3.4 (4) |
Cl3—Cd2—Cl6—Cd3 | −123.124 (18) | C16—N8—C15—C14 | 1.5 (5) |
Cl9—Cd2—Cl6—Cd3 | 40.241 (16) | C13—C14—C15—N8 | −5.8 (4) |
Cl4—Cd2—Cl6—Cd3 | −40.974 (16) | C15—N8—C16—O4 | −175.5 (3) |
Cl11—Cd2—Cl6—Cd1 | −139.382 (17) | C15—N8—C16—N7 | 4.8 (5) |
Cl3—Cd2—Cl6—Cd1 | −41.774 (17) | C13—N7—C16—O4 | 173.0 (3) |
Cl9—Cd2—Cl6—Cd1 | 121.591 (18) | C13—N7—C16—N8 | −7.2 (4) |
Cl4—Cd2—Cl6—Cd1 | 40.375 (16) | C20—N9—C17—C18 | −2.7 (4) |
Cl8—Cd3—Cl6—Cd2 | −136.844 (18) | N9—C17—C18—C19 | 0.0 (4) |
Cl5—Cd3—Cl6—Cd2 | 123.549 (18) | C20—N10—C19—C18 | 0.6 (4) |
Cl9—Cd3—Cl6—Cd2 | −41.324 (17) | C17—C18—C19—N10 | 1.0 (4) |
Cl4—Cd3—Cl6—Cd2 | 41.525 (16) | C19—N10—C20—O5 | 177.1 (3) |
Cl8—Cd3—Cl6—Cd1 | 139.312 (18) | C19—N10—C20—N9 | −3.0 (4) |
Cl5—Cd3—Cl6—Cd1 | 39.704 (17) | C17—N9—C20—O5 | −176.0 (3) |
Cl9—Cd3—Cl6—Cd1 | −125.168 (18) | C17—N9—C20—N10 | 4.1 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2A···Cl11i | 0.86 | 2.56 | 3.246 (2) | 138 |
N3—H3A···Cl8ii | 0.86 | 2.37 | 3.104 (2) | 144 |
N4—H4A···Cl10iii | 0.86 | 2.31 | 3.160 (2) | 169 |
N5—H5A···Cl7iv | 0.86 | 2.41 | 3.194 (2) | 151 |
N6—H6A···Cl1v | 0.86 | 2.31 | 3.138 (2) | 162 |
N7—H7A···O2vi | 0.86 | 2.03 | 2.880 (3) | 167 |
N10—H10B···Cl7vi | 0.86 | 2.54 | 3.349 (2) | 157 |
N8—H8A···O5vii | 0.86 | 2.28 | 2.804 (3) | 120 |
N8—H8A···O4viii | 0.86 | 2.34 | 3.117 (4) | 150 |
N9—H9B···O3 | 0.86 | 2.13 | 2.920 (3) | 152 |
Symmetry codes: (i) −x, y+1/2, −z+1/2; (ii) x, y+1, z; (iii) −x, −y+1, −z; (iv) −x+1, −y+1, −z+1; (v) x, −y+1/2, z+1/2; (vi) x, y, z+1; (vii) −x+1, −y+1, −z+2; (viii) −x+1, −y+2, −z+2. |
Experimental details
Crystal data | |
Chemical formula | C4H5N2O)5[Cd3Cl11] |
Mr | 1212.65 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 17.5446 (2), 8.08980 (2), 27.2451 (6) |
β (°) | 104.9470 (2) |
V (Å3) | 3736.12 (10) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 2.53 |
Crystal size (mm) | 0.51 × 0.07 × 0.04 |
Data collection | |
Diffractometer | Oxford Diffraction Gemini-R Ultra diffractometer |
Absorption correction | Multi-scan (CrysAlis RED; Oxford Diffraction, 2007) |
Tmin, Tmax | 0.522, 0.91 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 65985, 10979, 7919 |
Rint | 0.046 |
(sin θ/λ)max (Å−1) | 0.705 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.025, 0.058, 0.96 |
No. of reflections | 10979 |
No. of parameters | 442 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.99, −1.09 |
Computer programs: CrysAlis CCD (Oxford Diffraction, 2007), CrysAlis RED (Oxford Diffraction, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Cd1—Cl2 | 2.5216 (6) | Cd2—Cl3 | 2.6766 (6) |
Cd1—Cl1 | 2.5343 (6) | Cd2—Cl9 | 2.7295 (6) |
Cd1—Cl5 | 2.6796 (6) | Cd2—Cl4 | 2.7468 (6) |
Cd1—Cl3 | 2.6900 (6) | Cd3—Cl8 | 2.5081 (6) |
Cd1—Cl4 | 2.6917 (6) | Cd3—Cl7 | 2.5444 (6) |
Cd1—Cl6 | 2.7670 (6) | Cd3—Cl5 | 2.6284 (6) |
Cd2—Cl10 | 2.5184 (6) | Cd3—Cl9 | 2.6692 (6) |
Cd2—Cl11 | 2.5273 (6) | Cd3—Cl4 | 2.7201 (6) |
Cd2—Cl6 | 2.6698 (6) | Cd3—Cl6 | 2.7214 (6) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2A···Cl11i | 0.86 | 2.56 | 3.246 (2) | 138.0 |
N3—H3A···Cl8ii | 0.86 | 2.37 | 3.104 (2) | 144.0 |
N4—H4A···Cl10iii | 0.86 | 2.31 | 3.160 (2) | 169.3 |
N5—H5A···Cl7iv | 0.86 | 2.41 | 3.194 (2) | 151.0 |
N6—H6A···Cl1v | 0.86 | 2.31 | 3.138 (2) | 161.8 |
N7—H7A···O2vi | 0.86 | 2.03 | 2.880 (3) | 167.2 |
N10—H10B···Cl7vi | 0.86 | 2.54 | 3.349 (2) | 156.9 |
N8—H8A···O5vii | 0.86 | 2.28 | 2.804 (3) | 119.5 |
N8—H8A···O4viii | 0.86 | 2.34 | 3.117 (4) | 150.2 |
N9—H9B···O3 | 0.86 | 2.13 | 2.920 (3) | 152.3 |
Symmetry codes: (i) −x, y+1/2, −z+1/2; (ii) x, y+1, z; (iii) −x, −y+1, −z; (iv) −x+1, −y+1, −z+1; (v) x, −y+1/2, z+1/2; (vi) x, y, z+1; (vii) −x+1, −y+1, −z+2; (viii) −x+1, −y+2, −z+2. |
Acknowledgements
MAK thanks Bayero University, Kano, Nigeria for funding. Oxford Diffraction Ltd are thanked for the loan of an Oxford Gemini-R Ultra diffractometer to the University of Bristol.
References
Furberg, S. & Aas, J. B. (1975). Acta Chem. Scand. A29, 713–716. CrossRef CAS Web of Science Google Scholar
Oxford Diffraction (2007). CrysAlis CCD. and CrysAlis RED. Oxford Diffraction Ltd, Abingdon, Oxfordshire, England. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Waśkowska, A., Lis, T., Krzewska, U. & Czapla, Z. (1990). Acta Cryst. C46, 1768–1770. CSD CrossRef Web of Science IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
We sought to widen the use and exploitation of N—H···Cl interactions in the preparation of crystalline metal complexes by preparing [CdCl4][C4H5N2O]2 and the coordination network [CdCl2(C4H4N2O)2]. However, the title compound I was obtained instead, crystallizing in a monoclinic cell with the P21/c space group and an asymmetric unit consisting of five [C4H5N2O]+ cations and one [Cd3Cl11]5- anion. The crystal structure of a related complex determined at room temperature with a [Cd3Cl11]5-anion and [(CH3)2NH2]+ cations in the Cmcm space group revealed two alternating layers of cations and anions parallel to the (0 0 1) plane. This arrangement differs from that in the title compound I due to a complex three-dimensional hydrogen bond network involving anion-cation N—H···Cl and cation-cation N—H···O bonds. In contrast, the pyrimidin-2-onium cations reported in the related crystal structure (Furberg & Aas, 1975) display no N—H···O interactions.