organic compounds
2-[4-(Dimethylamino)phenyl]imidazo[4,5-f][1,10]phenanthroline sesquihydrate
aDepartment of Chemistry, Guangdong Medical College, Zhanjiang, Guangdong 524023, People's Republic of China
*Correspondence e-mail: yingq666@sohu.com
There are two formula units in the 21H17N5·1.5H2O. The imidazo[4,5-f][1,10]phenanthroline unit is almost coplanar with the benzene ring, the dihedral angles between them being 8.91 (5) and 4.93 (6)° in the two molecules. The is stabilized by a series of hydrogen bonds between the water molecules and the N atoms of the imidazophenanthroline groups.
of the title compound, CRelated literature
For related literature, see: Sun et al. (2007). For bond-length data, see: Allen et al. (1987).
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Rigaku/MSC, 2000); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536808016930/pk2098sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808016930/pk2098Isup2.hkl
1,10-phenanthroline-5,6-dione (1.5 mmol) and dimethylaminobenzaldehyde (1.5 mmol) were dissolved in CH3COOH-CH3COONH4 (1:1) solution(30 ml). The mixture was refluxed for 1.5 h under argon, after cooling, this mixture was diluted with water and neutralized with concentrated aqueous ammonia, immediately resulting a yellow precipitate, which was washed with water, acetone and diethyl ether respectively. Crystals of the title compound were obtained by recrystallization from dichloromethane.
Coordinates of hydrogen atoms bonded to carbon atoms were calculated following the stereochemical rules with C—H distances of 0.93 Å for phenyl and 0.96 Å for methyl groups. The hydrogen atoms were included in the
using the riding-model approximation. Uiso(H) were defined as 1.2Ueq of the parent carbon atoms for phenyl and 1.5Ueq of the parent carbon atoms for the methyl groups. All H atoms on N atoms were positioned geometrically and refined as riding atoms, with N—H = 0.86 Å and Uiso(H) = 1.2Ueq(N). The H atoms of the waters were located in a Fourier map following isotropic refinement.Data collection: CrystalClear (Rigaku/MSC, 2000); cell
CrystalClear (Rigaku/MSC, 2000); data reduction: CrystalClear (Rigaku/MSC, 2000); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick,/MSC 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. A view of the compound with the atomic numbering scheme. Displacement ellipsoids were drawn at the 30% probability level. |
C21H17N5·1.5(H2O) | Z = 4 |
Mr = 386.42 | F(000) = 772 |
Triclinic, P1 | Dx = 1.324 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 11.0503 (9) Å | Cell parameters from 4754 reflections |
b = 12.6386 (8) Å | θ = 1.5–28.3° |
c = 14.0297 (11) Å | µ = 0.09 mm−1 |
α = 73.685 (9)° | T = 293 K |
β = 81.909 (10)° | Prism, yellow |
γ = 79.163 (9)° | 0.45 × 0.35 × 0.30 mm |
V = 1838.9 (3) Å3 |
Bruker SMART CCD area-detector diffractometer | 8974 independent reflections |
Radiation source: fine-focus sealed tube | 5671 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.042 |
ϕ and ω scans | θmax = 28.3°, θmin = 1.9° |
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2000) | h = −14→14 |
Tmin = 0.961, Tmax = 0.974 | k = −16→13 |
15313 measured reflections | l = −18→17 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.051 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.138 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.96 | w = 1/[σ2(Fo2) + (0.0641P)2] where P = (Fo2 + 2Fc2)/3 |
8974 reflections | (Δ/σ)max < 0.001 |
520 parameters | Δρmax = 0.35 e Å−3 |
0 restraints | Δρmin = −0.22 e Å−3 |
C21H17N5·1.5(H2O) | γ = 79.163 (9)° |
Mr = 386.42 | V = 1838.9 (3) Å3 |
Triclinic, P1 | Z = 4 |
a = 11.0503 (9) Å | Mo Kα radiation |
b = 12.6386 (8) Å | µ = 0.09 mm−1 |
c = 14.0297 (11) Å | T = 293 K |
α = 73.685 (9)° | 0.45 × 0.35 × 0.30 mm |
β = 81.909 (10)° |
Bruker SMART CCD area-detector diffractometer | 8974 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2000) | 5671 reflections with I > 2σ(I) |
Tmin = 0.961, Tmax = 0.974 | Rint = 0.042 |
15313 measured reflections |
R[F2 > 2σ(F2)] = 0.051 | 0 restraints |
wR(F2) = 0.138 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.96 | Δρmax = 0.35 e Å−3 |
8974 reflections | Δρmin = −0.22 e Å−3 |
520 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.45171 (15) | 0.33283 (14) | 0.52723 (13) | 0.0392 (4) | |
H1A | 0.4972 | 0.2657 | 0.5594 | 0.047* | |
C2 | 0.50296 (15) | 0.39220 (14) | 0.43682 (13) | 0.0387 (4) | |
H2A | 0.5814 | 0.3665 | 0.4104 | 0.046* | |
C3 | 0.43558 (15) | 0.48961 (14) | 0.38724 (12) | 0.0348 (4) | |
H3A | 0.4676 | 0.5308 | 0.3261 | 0.042* | |
C4 | 0.31834 (14) | 0.52678 (12) | 0.42896 (11) | 0.0289 (3) | |
C5 | 0.27578 (14) | 0.46184 (13) | 0.52285 (12) | 0.0301 (3) | |
C6 | 0.01425 (16) | 0.46905 (15) | 0.70863 (13) | 0.0431 (4) | |
H6A | −0.0078 | 0.4281 | 0.7729 | 0.052* | |
C7 | −0.07076 (16) | 0.55909 (14) | 0.66489 (12) | 0.0392 (4) | |
H7A | −0.1476 | 0.5761 | 0.6985 | 0.047* | |
C8 | −0.03942 (15) | 0.62191 (14) | 0.57195 (12) | 0.0347 (4) | |
H8A | −0.0940 | 0.6836 | 0.5413 | 0.042* | |
C9 | 0.07598 (14) | 0.59251 (12) | 0.52306 (11) | 0.0291 (3) | |
C10 | 0.15556 (14) | 0.49771 (13) | 0.57175 (11) | 0.0296 (3) | |
C11 | 0.23794 (14) | 0.62512 (13) | 0.38244 (11) | 0.0293 (3) | |
C12 | 0.12222 (14) | 0.65243 (12) | 0.42739 (11) | 0.0297 (3) | |
C13 | 0.15243 (15) | 0.77516 (13) | 0.28321 (12) | 0.0322 (4) | |
C14 | 0.08692 (15) | 1.07618 (13) | 0.04811 (12) | 0.0356 (4) | |
C15 | 0.18800 (15) | 0.99284 (14) | 0.04114 (12) | 0.0395 (4) | |
H15A | 0.2441 | 1.0036 | −0.0154 | 0.047* | |
C16 | 0.20693 (16) | 0.89581 (14) | 0.11507 (13) | 0.0386 (4) | |
H16A | 0.2746 | 0.8420 | 0.1068 | 0.046* | |
C17 | 0.12777 (14) | 0.87548 (13) | 0.20225 (11) | 0.0323 (4) | |
C18 | 0.02535 (16) | 0.95707 (14) | 0.20844 (13) | 0.0404 (4) | |
H18A | −0.0310 | 0.9453 | 0.2648 | 0.048* | |
C19 | 0.00444 (16) | 1.05446 (14) | 0.13433 (13) | 0.0409 (4) | |
H19A | −0.0654 | 1.1067 | 0.1415 | 0.049* | |
C20 | 0.15919 (19) | 1.19547 (17) | −0.11149 (14) | 0.0590 (6) | |
H20A | 0.2375 | 1.1995 | −0.0916 | 0.089* | |
H20B | 0.1297 | 1.2649 | −0.1571 | 0.089* | |
H20C | 0.1689 | 1.1361 | −0.1435 | 0.089* | |
C21 | −0.03024 (19) | 1.26246 (16) | −0.01427 (16) | 0.0599 (6) | |
H21A | −0.0326 | 1.2769 | 0.0497 | 0.090* | |
H21B | −0.1068 | 1.2402 | −0.0198 | 0.090* | |
H21C | −0.0185 | 1.3289 | −0.0660 | 0.090* | |
C22 | 0.54717 (18) | −0.06149 (16) | 0.22080 (14) | 0.0497 (5) | |
H22A | 0.5276 | −0.1331 | 0.2468 | 0.060* | |
C23 | 0.50237 (17) | 0.00110 (16) | 0.13110 (14) | 0.0462 (5) | |
H23A | 0.4529 | −0.0278 | 0.0993 | 0.055* | |
C24 | 0.53193 (15) | 0.10615 (15) | 0.08978 (13) | 0.0384 (4) | |
H24A | 0.5030 | 0.1497 | 0.0297 | 0.046* | |
C25 | 0.60662 (14) | 0.14625 (13) | 0.14012 (12) | 0.0329 (4) | |
C26 | 0.64498 (15) | 0.07783 (14) | 0.23243 (12) | 0.0350 (4) | |
C27 | 0.8597 (2) | 0.18442 (16) | 0.39974 (15) | 0.0555 (5) | |
H27A | 0.9077 | 0.2044 | 0.4393 | 0.067* | |
C28 | 0.8253 (2) | 0.07935 (16) | 0.42726 (15) | 0.0534 (5) | |
H28A | 0.8520 | 0.0299 | 0.4859 | 0.064* | |
C29 | 0.82222 (18) | 0.25814 (15) | 0.31362 (14) | 0.0467 (5) | |
H29A | 0.8445 | 0.3290 | 0.2936 | 0.056* | |
C30 | 0.74997 (15) | 0.22578 (13) | 0.25602 (12) | 0.0353 (4) | |
C31 | 0.71856 (15) | 0.11709 (13) | 0.28993 (12) | 0.0349 (4) | |
C32 | 0.71051 (15) | 0.29322 (13) | 0.16206 (12) | 0.0340 (4) | |
C33 | 0.64546 (14) | 0.25301 (13) | 0.10671 (12) | 0.0323 (4) | |
C34 | 0.68171 (15) | 0.42218 (13) | 0.02556 (12) | 0.0356 (4) | |
C35 | 0.68460 (15) | 0.52469 (14) | −0.05363 (12) | 0.0365 (4) | |
C36 | 0.61896 (16) | 0.54779 (14) | −0.13666 (12) | 0.0389 (4) | |
H36A | 0.5723 | 0.4959 | −0.1418 | 0.047* | |
C37 | 0.62105 (16) | 0.64571 (14) | −0.21179 (12) | 0.0380 (4) | |
H37A | 0.5759 | 0.6583 | −0.2661 | 0.046* | |
C38 | 0.68999 (16) | 0.72604 (14) | −0.20729 (13) | 0.0396 (4) | |
C39 | 0.75241 (18) | 0.60484 (16) | −0.04965 (14) | 0.0478 (5) | |
H39A | 0.7969 | 0.5921 | 0.0051 | 0.057* | |
C40 | 0.75633 (19) | 0.70268 (15) | −0.12370 (14) | 0.0501 (5) | |
H40A | 0.8036 | 0.7539 | −0.1182 | 0.060* | |
C41 | 0.6379 (2) | 0.83872 (18) | −0.37374 (14) | 0.0590 (6) | |
H41A | 0.6566 | 0.9068 | −0.4202 | 0.089* | |
H41B | 0.5498 | 0.8424 | −0.3604 | 0.089* | |
H41C | 0.6715 | 0.7769 | −0.4016 | 0.089* | |
C42 | 0.7699 (2) | 0.90254 (18) | −0.28036 (16) | 0.0651 (6) | |
H42A | 0.7583 | 0.9659 | −0.3369 | 0.098* | |
H42B | 0.8550 | 0.8677 | −0.2830 | 0.098* | |
H42C | 0.7486 | 0.9265 | −0.2201 | 0.098* | |
N1 | 0.34306 (12) | 0.36491 (11) | 0.57079 (10) | 0.0360 (3) | |
N2 | 0.12422 (13) | 0.43701 (12) | 0.66596 (10) | 0.0379 (3) | |
N3 | 0.06820 (12) | 0.74814 (11) | 0.36341 (9) | 0.0311 (3) | |
H3B | −0.0049 | 0.7841 | 0.3723 | 0.037* | |
N4 | 0.25682 (12) | 0.70252 (11) | 0.29184 (10) | 0.0328 (3) | |
N5 | 0.07091 (14) | 1.17421 (13) | −0.02435 (11) | 0.0501 (4) | |
N6 | 0.61562 (14) | −0.02608 (12) | 0.27155 (11) | 0.0437 (4) | |
N7 | 0.75716 (14) | 0.04518 (12) | 0.37563 (11) | 0.0433 (4) | |
N8 | 0.73203 (13) | 0.39979 (11) | 0.11132 (10) | 0.0375 (3) | |
N9 | 0.62862 (12) | 0.33528 (11) | 0.01943 (10) | 0.0349 (3) | |
H7B | 0.5917 | 0.3326 | −0.0297 | 0.042* | |
N10 | 0.69184 (17) | 0.82371 (13) | −0.28192 (11) | 0.0537 (4) | |
O1 | 0.53530 (14) | 0.29356 (11) | 0.85874 (10) | 0.0434 (3) | |
O2 | 0.81559 (12) | 0.80854 (12) | 0.38807 (11) | 0.0495 (4) | |
O3 | 0.67079 (13) | 0.57209 (13) | 0.21453 (11) | 0.0546 (4) | |
H3 | 0.769 (2) | 0.873 (2) | 0.3756 (17) | 0.075 (7)* | |
H1 | 0.474 (2) | 0.3296 (19) | 0.8380 (16) | 0.064 (7)* | |
H5 | 0.723 (2) | 0.5821 (19) | 0.2531 (17) | 0.078 (8)* | |
H2 | 0.597 (2) | 0.297 (2) | 0.8037 (19) | 0.092 (9)* | |
H4 | 0.774 (2) | 0.757 (2) | 0.3773 (19) | 0.098 (9)* | |
H6 | 0.709 (2) | 0.522 (2) | 0.181 (2) | 0.097 (10)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0366 (9) | 0.0371 (9) | 0.0415 (10) | 0.0016 (8) | −0.0144 (8) | −0.0061 (8) |
C2 | 0.0330 (8) | 0.0421 (10) | 0.0435 (10) | −0.0035 (7) | −0.0054 (7) | −0.0160 (8) |
C3 | 0.0350 (8) | 0.0402 (9) | 0.0314 (9) | −0.0090 (7) | −0.0053 (7) | −0.0096 (7) |
C4 | 0.0298 (8) | 0.0300 (8) | 0.0291 (8) | −0.0070 (6) | −0.0076 (6) | −0.0074 (7) |
C5 | 0.0310 (8) | 0.0299 (8) | 0.0312 (8) | −0.0075 (7) | −0.0092 (7) | −0.0063 (7) |
C6 | 0.0430 (10) | 0.0497 (11) | 0.0294 (9) | −0.0084 (9) | −0.0006 (8) | 0.0005 (8) |
C7 | 0.0365 (9) | 0.0438 (10) | 0.0349 (9) | −0.0081 (8) | 0.0010 (7) | −0.0072 (8) |
C8 | 0.0342 (8) | 0.0344 (9) | 0.0361 (9) | −0.0067 (7) | −0.0053 (7) | −0.0086 (7) |
C9 | 0.0311 (8) | 0.0281 (8) | 0.0304 (8) | −0.0086 (6) | −0.0062 (6) | −0.0070 (7) |
C10 | 0.0324 (8) | 0.0300 (8) | 0.0272 (8) | −0.0098 (7) | −0.0073 (6) | −0.0036 (7) |
C11 | 0.0312 (8) | 0.0315 (8) | 0.0265 (8) | −0.0083 (7) | −0.0072 (6) | −0.0051 (7) |
C12 | 0.0328 (8) | 0.0281 (8) | 0.0288 (8) | −0.0074 (6) | −0.0083 (6) | −0.0042 (7) |
C13 | 0.0340 (8) | 0.0325 (8) | 0.0309 (9) | −0.0095 (7) | −0.0017 (7) | −0.0074 (7) |
C14 | 0.0340 (8) | 0.0333 (9) | 0.0347 (9) | −0.0049 (7) | −0.0046 (7) | −0.0010 (7) |
C15 | 0.0372 (9) | 0.0408 (10) | 0.0330 (9) | −0.0038 (8) | 0.0039 (7) | −0.0027 (8) |
C16 | 0.0374 (9) | 0.0346 (9) | 0.0385 (10) | −0.0019 (7) | −0.0021 (8) | −0.0041 (8) |
C17 | 0.0342 (8) | 0.0330 (8) | 0.0284 (8) | −0.0085 (7) | −0.0051 (7) | −0.0028 (7) |
C18 | 0.0373 (9) | 0.0385 (9) | 0.0370 (10) | −0.0047 (8) | 0.0057 (7) | −0.0018 (8) |
C19 | 0.0352 (9) | 0.0370 (9) | 0.0398 (10) | 0.0030 (7) | 0.0028 (8) | −0.0018 (8) |
C20 | 0.0584 (12) | 0.0519 (12) | 0.0471 (12) | −0.0040 (10) | 0.0041 (10) | 0.0115 (10) |
C21 | 0.0555 (12) | 0.0444 (11) | 0.0599 (13) | 0.0072 (10) | 0.0013 (10) | 0.0054 (10) |
C22 | 0.0594 (12) | 0.0454 (11) | 0.0507 (12) | −0.0228 (9) | −0.0038 (10) | −0.0139 (9) |
C23 | 0.0457 (10) | 0.0566 (12) | 0.0457 (11) | −0.0211 (9) | −0.0022 (9) | −0.0208 (9) |
C24 | 0.0355 (9) | 0.0452 (10) | 0.0369 (10) | −0.0088 (8) | −0.0025 (7) | −0.0133 (8) |
C25 | 0.0293 (8) | 0.0360 (9) | 0.0346 (9) | −0.0040 (7) | 0.0001 (7) | −0.0135 (7) |
C26 | 0.0350 (8) | 0.0365 (9) | 0.0358 (9) | −0.0049 (7) | −0.0016 (7) | −0.0143 (7) |
C27 | 0.0761 (14) | 0.0497 (11) | 0.0509 (12) | −0.0159 (11) | −0.0289 (10) | −0.0144 (10) |
C28 | 0.0730 (14) | 0.0482 (11) | 0.0426 (11) | −0.0135 (10) | −0.0199 (10) | −0.0081 (9) |
C29 | 0.0603 (12) | 0.0384 (10) | 0.0469 (11) | −0.0114 (9) | −0.0159 (9) | −0.0122 (9) |
C30 | 0.0392 (9) | 0.0337 (8) | 0.0351 (9) | −0.0038 (7) | −0.0046 (7) | −0.0130 (7) |
C31 | 0.0374 (9) | 0.0345 (9) | 0.0329 (9) | −0.0017 (7) | −0.0060 (7) | −0.0102 (7) |
C32 | 0.0355 (8) | 0.0327 (8) | 0.0351 (9) | −0.0025 (7) | −0.0047 (7) | −0.0122 (7) |
C33 | 0.0313 (8) | 0.0347 (8) | 0.0310 (9) | −0.0009 (7) | −0.0057 (7) | −0.0102 (7) |
C34 | 0.0354 (8) | 0.0353 (9) | 0.0378 (10) | −0.0042 (7) | −0.0029 (7) | −0.0134 (8) |
C35 | 0.0384 (9) | 0.0355 (9) | 0.0363 (9) | −0.0048 (7) | −0.0042 (7) | −0.0108 (7) |
C36 | 0.0402 (9) | 0.0369 (9) | 0.0414 (10) | −0.0084 (8) | −0.0047 (8) | −0.0111 (8) |
C37 | 0.0419 (9) | 0.0406 (9) | 0.0328 (9) | −0.0046 (8) | −0.0089 (7) | −0.0104 (8) |
C38 | 0.0464 (10) | 0.0386 (9) | 0.0334 (9) | −0.0074 (8) | 0.0007 (8) | −0.0103 (8) |
C39 | 0.0606 (12) | 0.0489 (11) | 0.0398 (10) | −0.0169 (10) | −0.0183 (9) | −0.0087 (9) |
C40 | 0.0635 (12) | 0.0439 (11) | 0.0488 (11) | −0.0208 (10) | −0.0141 (10) | −0.0092 (9) |
C41 | 0.0721 (14) | 0.0602 (13) | 0.0424 (12) | −0.0160 (11) | −0.0035 (10) | −0.0069 (10) |
C42 | 0.0895 (16) | 0.0610 (14) | 0.0502 (13) | −0.0392 (13) | −0.0047 (12) | −0.0061 (10) |
N1 | 0.0347 (7) | 0.0348 (7) | 0.0368 (8) | −0.0045 (6) | −0.0093 (6) | −0.0045 (6) |
N2 | 0.0388 (8) | 0.0419 (8) | 0.0292 (8) | −0.0089 (7) | −0.0055 (6) | −0.0004 (6) |
N3 | 0.0296 (7) | 0.0305 (7) | 0.0305 (7) | −0.0038 (6) | −0.0040 (6) | −0.0036 (6) |
N4 | 0.0337 (7) | 0.0328 (7) | 0.0299 (7) | −0.0062 (6) | −0.0047 (6) | −0.0036 (6) |
N5 | 0.0471 (9) | 0.0417 (9) | 0.0400 (9) | 0.0060 (7) | 0.0071 (7) | 0.0103 (7) |
N6 | 0.0519 (9) | 0.0367 (8) | 0.0449 (9) | −0.0121 (7) | −0.0070 (7) | −0.0097 (7) |
N7 | 0.0544 (9) | 0.0396 (8) | 0.0372 (8) | −0.0072 (7) | −0.0163 (7) | −0.0064 (7) |
N8 | 0.0425 (8) | 0.0322 (7) | 0.0391 (8) | −0.0052 (6) | −0.0077 (6) | −0.0102 (6) |
N9 | 0.0351 (7) | 0.0374 (8) | 0.0334 (8) | −0.0042 (6) | −0.0076 (6) | −0.0099 (6) |
N10 | 0.0777 (12) | 0.0483 (9) | 0.0387 (9) | −0.0280 (9) | −0.0114 (8) | −0.0024 (7) |
O1 | 0.0402 (7) | 0.0500 (8) | 0.0377 (7) | −0.0026 (6) | −0.0087 (6) | −0.0085 (6) |
O2 | 0.0374 (7) | 0.0348 (7) | 0.0691 (10) | −0.0051 (6) | −0.0072 (6) | −0.0013 (7) |
O3 | 0.0456 (8) | 0.0702 (10) | 0.0561 (9) | 0.0041 (7) | −0.0200 (7) | −0.0309 (8) |
C1—N1 | 1.315 (2) | C23—H23A | 0.9300 |
C1—C2 | 1.384 (2) | C24—C25 | 1.400 (2) |
C1—H1A | 0.9300 | C24—H24A | 0.9300 |
C2—C3 | 1.369 (2) | C25—C26 | 1.411 (2) |
C2—H2A | 0.9300 | C25—C33 | 1.425 (2) |
C3—C4 | 1.398 (2) | C26—N6 | 1.355 (2) |
C3—H3A | 0.9300 | C26—C31 | 1.456 (2) |
C4—C5 | 1.412 (2) | C27—C29 | 1.365 (3) |
C4—C11 | 1.433 (2) | C27—C28 | 1.385 (3) |
C5—N1 | 1.3570 (19) | C27—H27A | 0.9300 |
C5—C10 | 1.460 (2) | C28—N7 | 1.315 (2) |
C6—N2 | 1.321 (2) | C28—H28A | 0.9300 |
C6—C7 | 1.386 (2) | C29—C30 | 1.396 (2) |
C6—H6A | 0.9300 | C29—H29A | 0.9300 |
C7—C8 | 1.358 (2) | C30—C31 | 1.414 (2) |
C7—H7A | 0.9300 | C30—C32 | 1.430 (2) |
C8—C9 | 1.398 (2) | C31—N7 | 1.356 (2) |
C8—H8A | 0.9300 | C32—C33 | 1.376 (2) |
C9—C10 | 1.410 (2) | C32—N8 | 1.383 (2) |
C9—C12 | 1.420 (2) | C33—N9 | 1.375 (2) |
C10—N2 | 1.363 (2) | C34—N8 | 1.332 (2) |
C11—C12 | 1.372 (2) | C34—N9 | 1.366 (2) |
C11—N4 | 1.3855 (19) | C34—C35 | 1.453 (2) |
C12—N3 | 1.3763 (19) | C35—C39 | 1.386 (2) |
C13—N4 | 1.329 (2) | C35—C36 | 1.391 (2) |
C13—N3 | 1.3630 (19) | C36—C37 | 1.384 (2) |
C13—C17 | 1.456 (2) | C36—H36A | 0.9300 |
C14—N5 | 1.364 (2) | C37—C38 | 1.398 (2) |
C14—C15 | 1.397 (2) | C37—H37A | 0.9300 |
C14—C19 | 1.402 (2) | C38—N10 | 1.378 (2) |
C15—C16 | 1.369 (2) | C38—C40 | 1.402 (3) |
C15—H15A | 0.9300 | C39—C40 | 1.377 (3) |
C16—C17 | 1.391 (2) | C39—H39A | 0.9300 |
C16—H16A | 0.9300 | C40—H40A | 0.9300 |
C17—C18 | 1.391 (2) | C41—N10 | 1.445 (2) |
C18—C19 | 1.375 (2) | C41—H41A | 0.9600 |
C18—H18A | 0.9300 | C41—H41B | 0.9600 |
C19—H19A | 0.9300 | C41—H41C | 0.9600 |
C20—N5 | 1.448 (2) | C42—N10 | 1.442 (3) |
C20—H20A | 0.9600 | C42—H42A | 0.9600 |
C20—H20B | 0.9600 | C42—H42B | 0.9600 |
C20—H20C | 0.9600 | C42—H42C | 0.9600 |
C21—N5 | 1.445 (2) | N3—H3B | 0.8600 |
C21—H21A | 0.9600 | N9—H7B | 0.8600 |
C21—H21B | 0.9600 | O1—H1 | 0.78 (2) |
C21—H21C | 0.9600 | O1—H2 | 0.95 (3) |
C22—N6 | 1.318 (2) | O2—H3 | 0.86 (2) |
C22—C23 | 1.387 (3) | O2—H4 | 0.92 (3) |
C22—H22A | 0.9300 | O3—H5 | 0.89 (3) |
C23—C24 | 1.372 (2) | O3—H6 | 0.90 (3) |
N1—C1—C2 | 124.46 (15) | C26—C25—C33 | 116.55 (15) |
N1—C1—H1A | 117.8 | N6—C26—C25 | 122.21 (16) |
C2—C1—H1A | 117.8 | N6—C26—C31 | 117.10 (15) |
C3—C2—C1 | 118.45 (16) | C25—C26—C31 | 120.69 (15) |
C3—C2—H2A | 120.8 | C29—C27—C28 | 118.96 (19) |
C1—C2—H2A | 120.8 | C29—C27—H27A | 120.5 |
C2—C3—C4 | 119.64 (15) | C28—C27—H27A | 120.5 |
C2—C3—H3A | 120.2 | N7—C28—C27 | 124.08 (18) |
C4—C3—H3A | 120.2 | N7—C28—H28A | 118.0 |
C3—C4—C5 | 117.56 (14) | C27—C28—H28A | 118.0 |
C3—C4—C11 | 124.56 (14) | C27—C29—C30 | 119.16 (17) |
C5—C4—C11 | 117.88 (14) | C27—C29—H29A | 120.4 |
N1—C5—C4 | 122.17 (14) | C30—C29—H29A | 120.4 |
N1—C5—C10 | 117.56 (14) | C29—C30—C31 | 118.13 (16) |
C4—C5—C10 | 120.27 (14) | C29—C30—C32 | 124.34 (16) |
N2—C6—C7 | 125.02 (15) | C31—C30—C32 | 117.44 (15) |
N2—C6—H6A | 117.5 | N7—C31—C30 | 121.65 (16) |
C7—C6—H6A | 117.5 | N7—C31—C26 | 117.60 (15) |
C8—C7—C6 | 118.58 (16) | C30—C31—C26 | 120.74 (15) |
C8—C7—H7A | 120.7 | C33—C32—N8 | 110.09 (14) |
C6—C7—H7A | 120.7 | C33—C32—C30 | 121.00 (15) |
C7—C8—C9 | 119.08 (15) | N8—C32—C30 | 128.87 (16) |
C7—C8—H8A | 120.5 | N9—C33—C32 | 106.12 (14) |
C9—C8—H8A | 120.5 | N9—C33—C25 | 130.44 (15) |
C8—C9—C10 | 118.70 (14) | C32—C33—C25 | 123.44 (15) |
C8—C9—C12 | 125.07 (14) | N8—C34—N9 | 111.70 (14) |
C10—C9—C12 | 116.21 (14) | N8—C34—C35 | 124.89 (16) |
N2—C10—C9 | 121.60 (14) | N9—C34—C35 | 123.40 (15) |
N2—C10—C5 | 117.57 (14) | C39—C35—C36 | 116.67 (16) |
C9—C10—C5 | 120.82 (14) | C39—C35—C34 | 121.45 (16) |
C12—C11—N4 | 110.16 (13) | C36—C35—C34 | 121.88 (16) |
C12—C11—C4 | 120.34 (14) | C37—C36—C35 | 121.91 (17) |
N4—C11—C4 | 129.48 (14) | C37—C36—H36A | 119.0 |
C11—C12—N3 | 106.02 (13) | C35—C36—H36A | 119.0 |
C11—C12—C9 | 124.25 (14) | C36—C37—C38 | 121.05 (16) |
N3—C12—C9 | 129.68 (14) | C36—C37—H37A | 119.5 |
N4—C13—N3 | 111.78 (13) | C38—C37—H37A | 119.5 |
N4—C13—C17 | 126.34 (14) | N10—C38—C37 | 121.09 (17) |
N3—C13—C17 | 121.82 (14) | N10—C38—C40 | 121.86 (17) |
N5—C14—C15 | 121.61 (15) | C37—C38—C40 | 117.05 (16) |
N5—C14—C19 | 121.95 (15) | C40—C39—C35 | 122.46 (18) |
C15—C14—C19 | 116.43 (14) | C40—C39—H39A | 118.8 |
C16—C15—C14 | 121.96 (15) | C35—C39—H39A | 118.8 |
C16—C15—H15A | 119.0 | C39—C40—C38 | 120.86 (18) |
C14—C15—H15A | 119.0 | C39—C40—H40A | 119.6 |
C15—C16—C17 | 121.85 (16) | C38—C40—H40A | 119.6 |
C15—C16—H16A | 119.1 | N10—C41—H41A | 109.5 |
C17—C16—H16A | 119.1 | N10—C41—H41B | 109.5 |
C16—C17—C18 | 116.35 (14) | H41A—C41—H41B | 109.5 |
C16—C17—C13 | 121.61 (14) | N10—C41—H41C | 109.5 |
C18—C17—C13 | 122.02 (14) | H41A—C41—H41C | 109.5 |
C19—C18—C17 | 122.41 (15) | H41B—C41—H41C | 109.5 |
C19—C18—H18A | 118.8 | N10—C42—H42A | 109.5 |
C17—C18—H18A | 118.8 | N10—C42—H42B | 109.5 |
C18—C19—C14 | 120.94 (15) | H42A—C42—H42B | 109.5 |
C18—C19—H19A | 119.5 | N10—C42—H42C | 109.5 |
C14—C19—H19A | 119.5 | H42A—C42—H42C | 109.5 |
N5—C20—H20A | 109.5 | H42B—C42—H42C | 109.5 |
N5—C20—H20B | 109.5 | C1—N1—C5 | 117.67 (14) |
H20A—C20—H20B | 109.5 | C6—N2—C10 | 116.97 (14) |
N5—C20—H20C | 109.5 | C13—N3—C12 | 107.03 (13) |
H20A—C20—H20C | 109.5 | C13—N3—H3B | 126.5 |
H20B—C20—H20C | 109.5 | C12—N3—H3B | 126.5 |
N5—C21—H21A | 109.5 | C13—N4—C11 | 105.00 (13) |
N5—C21—H21B | 109.5 | C14—N5—C21 | 121.34 (14) |
H21A—C21—H21B | 109.5 | C14—N5—C20 | 120.76 (14) |
N5—C21—H21C | 109.5 | C21—N5—C20 | 117.81 (14) |
H21A—C21—H21C | 109.5 | C22—N6—C26 | 117.48 (16) |
H21B—C21—H21C | 109.5 | C28—N7—C31 | 118.01 (16) |
N6—C22—C23 | 124.27 (17) | C34—N8—C32 | 105.13 (14) |
N6—C22—H22A | 117.9 | C34—N9—C33 | 106.95 (14) |
C23—C22—H22A | 117.9 | C34—N9—H7B | 126.5 |
C24—C23—C22 | 119.17 (18) | C33—N9—H7B | 126.5 |
C24—C23—H23A | 120.4 | C38—N10—C42 | 120.77 (17) |
C22—C23—H23A | 120.4 | C38—N10—C41 | 120.65 (16) |
C23—C24—C25 | 118.49 (17) | C42—N10—C41 | 117.20 (16) |
C23—C24—H24A | 120.8 | H1—O1—H2 | 107 (2) |
C25—C24—H24A | 120.8 | H3—O2—H4 | 108 (2) |
C24—C25—C26 | 118.34 (15) | H5—O3—H6 | 109 (2) |
C24—C25—C33 | 125.09 (15) | ||
N1—C1—C2—C3 | −1.8 (3) | N6—C26—C31—C30 | −178.01 (14) |
C1—C2—C3—C4 | 0.5 (3) | C25—C26—C31—C30 | 1.9 (2) |
C2—C3—C4—C5 | 1.3 (2) | C29—C30—C32—C33 | 176.12 (16) |
C2—C3—C4—C11 | −177.76 (15) | C31—C30—C32—C33 | −0.6 (2) |
C3—C4—C5—N1 | −1.9 (2) | C29—C30—C32—N8 | −1.2 (3) |
C11—C4—C5—N1 | 177.18 (14) | C31—C30—C32—N8 | −177.90 (15) |
C3—C4—C5—C10 | 178.31 (14) | N8—C32—C33—N9 | 1.17 (17) |
C11—C4—C5—C10 | −2.6 (2) | C30—C32—C33—N9 | −176.61 (14) |
N2—C6—C7—C8 | −1.6 (3) | N8—C32—C33—C25 | −178.44 (14) |
C6—C7—C8—C9 | 1.2 (3) | C30—C32—C33—C25 | 3.8 (2) |
C7—C8—C9—C10 | 0.6 (2) | C24—C25—C33—N9 | −5.0 (3) |
C7—C8—C9—C12 | −177.95 (16) | C26—C25—C33—N9 | 176.56 (15) |
C8—C9—C10—N2 | −2.3 (2) | C24—C25—C33—C32 | 174.52 (15) |
C12—C9—C10—N2 | 176.43 (15) | C26—C25—C33—C32 | −3.9 (2) |
C8—C9—C10—C5 | 178.43 (14) | N8—C34—C35—C39 | 6.5 (3) |
C12—C9—C10—C5 | −2.9 (2) | N9—C34—C35—C39 | −171.90 (15) |
N1—C5—C10—N2 | 5.9 (2) | N8—C34—C35—C36 | −172.97 (16) |
C4—C5—C10—N2 | −174.34 (15) | N9—C34—C35—C36 | 8.6 (2) |
N1—C5—C10—C9 | −174.76 (14) | C39—C35—C36—C37 | 0.1 (3) |
C4—C5—C10—C9 | 5.0 (2) | C34—C35—C36—C37 | 179.58 (15) |
C3—C4—C11—C12 | 177.28 (15) | C35—C36—C37—C38 | 0.1 (3) |
C5—C4—C11—C12 | −1.8 (2) | C36—C37—C38—N10 | −179.81 (16) |
C3—C4—C11—N4 | −1.1 (3) | C36—C37—C38—C40 | 0.0 (3) |
C5—C4—C11—N4 | 179.86 (16) | C36—C35—C39—C40 | −0.4 (3) |
N4—C11—C12—N3 | 0.25 (18) | C34—C35—C39—C40 | −179.87 (17) |
C4—C11—C12—N3 | −178.41 (14) | C35—C39—C40—C38 | 0.5 (3) |
N4—C11—C12—C9 | −177.31 (15) | N10—C38—C40—C39 | 179.53 (18) |
C4—C11—C12—C9 | 4.0 (2) | C37—C38—C40—C39 | −0.3 (3) |
C8—C9—C12—C11 | 176.98 (15) | C2—C1—N1—C5 | 1.2 (3) |
C10—C9—C12—C11 | −1.6 (2) | C4—C5—N1—C1 | 0.7 (2) |
C8—C9—C12—N3 | 0.0 (3) | C10—C5—N1—C1 | −179.54 (14) |
C10—C9—C12—N3 | −178.55 (15) | C7—C6—N2—C10 | 0.0 (3) |
N5—C14—C15—C16 | 177.78 (18) | C9—C10—N2—C6 | 1.9 (2) |
C19—C14—C15—C16 | −1.0 (3) | C5—C10—N2—C6 | −178.74 (15) |
C14—C15—C16—C17 | −1.2 (3) | N4—C13—N3—C12 | 0.15 (18) |
C15—C16—C17—C18 | 2.6 (3) | C17—C13—N3—C12 | −177.26 (14) |
C15—C16—C17—C13 | −176.22 (17) | C11—C12—N3—C13 | −0.24 (17) |
N4—C13—C17—C16 | 11.0 (3) | C9—C12—N3—C13 | 177.13 (16) |
N3—C13—C17—C16 | −171.95 (15) | N3—C13—N4—C11 | 0.00 (18) |
N4—C13—C17—C18 | −167.74 (17) | C17—C13—N4—C11 | 177.27 (16) |
N3—C13—C17—C18 | 9.3 (3) | C12—C11—N4—C13 | −0.15 (18) |
C16—C17—C18—C19 | −2.0 (3) | C4—C11—N4—C13 | 178.34 (16) |
C13—C17—C18—C19 | 176.88 (18) | C15—C14—N5—C21 | −176.70 (19) |
C17—C18—C19—C14 | −0.2 (3) | C19—C14—N5—C21 | 2.0 (3) |
N5—C14—C19—C18 | −177.12 (18) | C15—C14—N5—C20 | −0.2 (3) |
C15—C14—C19—C18 | 1.7 (3) | C19—C14—N5—C20 | 178.50 (18) |
N6—C22—C23—C24 | 1.4 (3) | C23—C22—N6—C26 | −0.8 (3) |
C22—C23—C24—C25 | 0.0 (3) | C25—C26—N6—C22 | −1.1 (2) |
C23—C24—C25—C26 | −1.8 (2) | C31—C26—N6—C22 | 178.83 (15) |
C23—C24—C25—C33 | 179.79 (15) | C27—C28—N7—C31 | 0.2 (3) |
C24—C25—C26—N6 | 2.4 (2) | C30—C31—N7—C28 | 0.1 (3) |
C33—C25—C26—N6 | −179.01 (14) | C26—C31—N7—C28 | 178.98 (16) |
C24—C25—C26—C31 | −177.51 (14) | N9—C34—N8—C32 | 0.32 (18) |
C33—C25—C26—C31 | 1.0 (2) | C35—C34—N8—C32 | −178.26 (15) |
C29—C27—C28—N7 | −0.4 (3) | C33—C32—N8—C34 | −0.93 (17) |
C28—C27—C29—C30 | 0.2 (3) | C30—C32—N8—C34 | 176.63 (16) |
C27—C29—C30—C31 | 0.1 (3) | N8—C34—N9—C33 | 0.40 (18) |
C27—C29—C30—C32 | −176.62 (17) | C35—C34—N9—C33 | 179.00 (14) |
C29—C30—C31—N7 | −0.2 (2) | C32—C33—N9—C34 | −0.94 (16) |
C32—C30—C31—N7 | 176.68 (15) | C25—C33—N9—C34 | 178.63 (16) |
C29—C30—C31—C26 | −179.08 (15) | C37—C38—N10—C42 | −175.56 (18) |
C32—C30—C31—C26 | −2.2 (2) | C40—C38—N10—C42 | 4.6 (3) |
N6—C26—C31—N7 | 3.1 (2) | C37—C38—N10—C41 | −9.3 (3) |
C25—C26—C31—N7 | −176.97 (15) | C40—C38—N10—C41 | 170.87 (18) |
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H6···N8 | 0.90 (3) | 2.01 (3) | 2.870 (2) | 159 (2) |
C18—H18A···N3 | 0.93 | 2.61 | 2.919 (2) | 100 |
O1—H1···O3i | 0.78 (2) | 1.93 (2) | 2.711 (2) | 176 (2) |
O1—H2···N4i | 0.95 (3) | 1.95 (3) | 2.891 (2) | 170 (2) |
N9—H7B···O1ii | 0.86 | 1.98 | 2.820 (2) | 166 |
O2—H3···N6iii | 0.86 (2) | 2.34 (2) | 3.047 (2) | 139 (2) |
O2—H3···N7iii | 0.86 (2) | 2.15 (2) | 2.899 (2) | 144 (2) |
O2—H4···N1i | 0.92 (3) | 2.11 (3) | 2.943 (2) | 151 (2) |
N3—H3B···O2iv | 0.86 | 1.94 | 2.751 (2) | 157 |
O3—H5···N2i | 0.89 (3) | 2.10 (3) | 2.969 (2) | 163 (2) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x, y, z−1; (iii) x, y+1, z; (iv) x−1, y, z. |
Experimental details
Crystal data | |
Chemical formula | C21H17N5·1.5(H2O) |
Mr | 386.42 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 11.0503 (9), 12.6386 (8), 14.0297 (11) |
α, β, γ (°) | 73.685 (9), 81.909 (10), 79.163 (9) |
V (Å3) | 1838.9 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.45 × 0.35 × 0.30 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (CrystalClear; Rigaku/MSC, 2000) |
Tmin, Tmax | 0.961, 0.974 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 15313, 8974, 5671 |
Rint | 0.042 |
(sin θ/λ)max (Å−1) | 0.667 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.051, 0.138, 0.96 |
No. of reflections | 8974 |
No. of parameters | 520 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.35, −0.22 |
Computer programs: CrystalClear (Rigaku/MSC, 2000), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick,/MSC 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H6···N8 | 0.90 (3) | 2.01 (3) | 2.870 (2) | 159 (2) |
C18—H18A···N3 | 0.93 | 2.61 | 2.919 (2) | 100.3 |
O1—H1···O3i | 0.78 (2) | 1.93 (2) | 2.711 (2) | 176 (2) |
O1—H2···N4i | 0.95 (3) | 1.95 (3) | 2.891 (2) | 170 (2) |
N9—H7B···O1ii | 0.86 | 1.98 | 2.820 (2) | 166.4 |
O2—H3···N6iii | 0.86 (2) | 2.34 (2) | 3.047 (2) | 139 (2) |
O2—H3···N7iii | 0.86 (2) | 2.15 (2) | 2.899 (2) | 144 (2) |
O2—H4···N1i | 0.92 (3) | 2.11 (3) | 2.943 (2) | 151 (2) |
N3—H3B···O2iv | 0.86 | 1.94 | 2.751 (2) | 156.7 |
O3—H5···N2i | 0.89 (3) | 2.10 (3) | 2.969 (2) | 163 (2) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x, y, z−1; (iii) x, y+1, z; (iv) x−1, y, z. |
Acknowledgements
I acknowledge financial support from the NSF of Guangdong Province
References
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1,10-Phenanthroline and its derivatives are commonly used as ligands in metal complexes (e.g. Sun et al., 2007). We report here the structure of the title compound, which was synthesized from [4,5-f]1,10-phenanthroline. In this compound, all the bond lengths are within normal ranges (Allen et al., 1987). The asymmetric unit consists of two independent C21H17N5 molecules and three H2O molecules (Fig. 1). Each C21H17N5 molecule consists of imidazo- phenanthroline and phenyl rings. The imidazo[4,5-f]1,10-phenanthroline moiety is almost coplanar with the phenyl ring, with dihedral angles between them in each molecule of 8.91 (5)° and 4.93 (6)°. The three H2O molecules link the 2-(4'-Dimethylaminophenyl)imidazo[4,5-f]1,10-phenanthroline molecules by hydrogen bonds to the nitrogen atoms of the imidazo-phenantholine ring systems.