organic compounds
4,4′-[Propane-1,3-diylbis(nitrilomethylidyne)]dibenzonitrile
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, and bDepartment of Chemistry, School of Science, Payame Noor University (PNU), Ardakan, Yazd, Iran
*Correspondence e-mail: hkfun@usm.my
The molecule of the title Schiff base compound, C19H16N4, has crystallographic twofold rotation symmetry. The imino group is coplanar with the aromatic ring. Within the molecule, the planar units are parallel, but extend in opposite directions from the central methylene bridge. The packing of the molecules is controlled by C—H⋯π interactions.
Related literature
For values of bond lengths, see Allen et al. (1987). For related structures, see: Li et al. (2005); Bomfim et al. (2005); Glidewell et al. (2005, 2006); Sun et al. (2004); Habibi et al. (2007).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2005); cell APEX2; data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2003).
Supporting information
10.1107/S1600536808018680/tk2276sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808018680/tk2276Isup2.hkl
A solution of 1,3-propanediamine (0.1 mmol, 0.074 g) was slowly added to a solution of 4-cyanobenzaldehyde (0.2 mmol, 0.026 g) in chloroform (30 ml). Recrystallization of the resulting solid from ethanol afforded colourless crystals of (I).
The C9-bound H atom was located from a difference Fourier map and refined freely. The remaining H atoms were positioned geometrically with C—H = 0.93 Å (aromatic and methine) or 0.97 Å (CH2), and refined in the riding mode approximation with Uiso(H) = 1.2Ueq(C).
Data collection: APEX2 (Bruker, 2005); cell
APEX2 (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2003).C19H16N4 | F(000) = 632 |
Mr = 300.36 | Dx = 1.263 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 2928 reflections |
a = 14.4982 (4) Å | θ = 3.0–30.0° |
b = 6.9025 (2) Å | µ = 0.08 mm−1 |
c = 16.9842 (6) Å | T = 100 K |
β = 111.659 (4)° | Needle, colourless |
V = 1579.67 (8) Å3 | 0.37 × 0.12 × 0.12 mm |
Z = 4 |
Bruker SMART APEXII CCD area-detector diffractometer | 1544 independent reflections |
Radiation source: fine-focus sealed tube | 1257 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.077 |
ϕ and ω scans | θmax = 26.0°, θmin = 2.6° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −17→17 |
Tmin = 0.886, Tmax = 0.991 | k = −8→8 |
13317 measured reflections | l = −20→20 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.081 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.127 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.17 | w = 1/[σ2(Fo2) + (0.0132P)2 + 5.0812P] where P = (Fo2 + 2Fc2)/3 |
1544 reflections | (Δ/σ)max < 0.001 |
109 parameters | Δρmax = 0.18 e Å−3 |
0 restraints | Δρmin = −0.37 e Å−3 |
C19H16N4 | V = 1579.67 (8) Å3 |
Mr = 300.36 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 14.4982 (4) Å | µ = 0.08 mm−1 |
b = 6.9025 (2) Å | T = 100 K |
c = 16.9842 (6) Å | 0.37 × 0.12 × 0.12 mm |
β = 111.659 (4)° |
Bruker SMART APEXII CCD area-detector diffractometer | 1544 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 1257 reflections with I > 2σ(I) |
Tmin = 0.886, Tmax = 0.991 | Rint = 0.077 |
13317 measured reflections |
R[F2 > 2σ(F2)] = 0.081 | 0 restraints |
wR(F2) = 0.127 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.17 | Δρmax = 0.18 e Å−3 |
1544 reflections | Δρmin = −0.37 e Å−3 |
109 parameters |
Experimental. The low-temperature data was collected with the Oxford Cyrosystem Cobra low-temperature attachment. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.14554 (16) | 0.8098 (3) | 0.29318 (13) | 0.0173 (5) | |
N2 | 0.5053 (2) | 0.1024 (4) | 0.59762 (16) | 0.0373 (7) | |
C1 | 0.29164 (19) | 0.6045 (4) | 0.43213 (16) | 0.0193 (6) | |
H1A | 0.2869 | 0.7370 | 0.4397 | 0.023* | |
C2 | 0.3625 (2) | 0.4975 (4) | 0.49323 (16) | 0.0211 (6) | |
H2A | 0.4052 | 0.5574 | 0.5422 | 0.025* | |
C3 | 0.3701 (2) | 0.2986 (4) | 0.48155 (17) | 0.0192 (6) | |
C4 | 0.3064 (2) | 0.2085 (4) | 0.40896 (17) | 0.0203 (6) | |
H4A | 0.3116 | 0.0761 | 0.4012 | 0.024* | |
C5 | 0.23520 (19) | 0.3172 (4) | 0.34838 (17) | 0.0183 (6) | |
H5A | 0.1921 | 0.2570 | 0.2997 | 0.022* | |
C6 | 0.22689 (19) | 0.5159 (4) | 0.35906 (16) | 0.0161 (6) | |
C7 | 0.15182 (19) | 0.6273 (4) | 0.29081 (17) | 0.0183 (6) | |
H7A | 0.1077 | 0.5609 | 0.2446 | 0.022* | |
C8 | 0.06898 (19) | 0.9029 (4) | 0.22061 (16) | 0.0185 (6) | |
H8A | 0.0310 | 0.8047 | 0.1811 | 0.022* | |
H8B | 0.1002 | 0.9855 | 0.1915 | 0.022* | |
C9 | 0.0000 | 1.0233 (6) | 0.2500 | 0.0162 (8) | |
C10 | 0.4454 (2) | 0.1869 (4) | 0.54596 (18) | 0.0262 (7) | |
H9A | 0.0367 (18) | 1.110 (4) | 0.2938 (15) | 0.015 (7)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0147 (12) | 0.0211 (13) | 0.0155 (11) | 0.0035 (10) | 0.0049 (9) | 0.0024 (10) |
N2 | 0.0446 (17) | 0.0425 (17) | 0.0235 (14) | 0.0218 (15) | 0.0109 (13) | 0.0090 (13) |
C1 | 0.0215 (15) | 0.0158 (14) | 0.0217 (14) | 0.0001 (12) | 0.0091 (12) | −0.0019 (12) |
C2 | 0.0220 (15) | 0.0242 (16) | 0.0142 (13) | 0.0027 (12) | 0.0034 (12) | −0.0020 (12) |
C3 | 0.0193 (14) | 0.0227 (15) | 0.0199 (14) | 0.0046 (12) | 0.0121 (12) | 0.0049 (12) |
C4 | 0.0246 (15) | 0.0151 (14) | 0.0268 (15) | 0.0011 (12) | 0.0162 (13) | 0.0015 (12) |
C5 | 0.0167 (14) | 0.0191 (15) | 0.0198 (14) | −0.0056 (11) | 0.0075 (12) | −0.0058 (11) |
C6 | 0.0150 (14) | 0.0202 (15) | 0.0165 (13) | 0.0008 (11) | 0.0097 (11) | 0.0004 (11) |
C7 | 0.0135 (14) | 0.0229 (16) | 0.0177 (14) | −0.0030 (11) | 0.0048 (11) | −0.0025 (11) |
C8 | 0.0156 (13) | 0.0236 (15) | 0.0159 (13) | 0.0031 (12) | 0.0052 (11) | 0.0001 (12) |
C9 | 0.0144 (19) | 0.015 (2) | 0.0174 (19) | 0.000 | 0.0042 (16) | 0.000 |
C10 | 0.0330 (17) | 0.0270 (17) | 0.0206 (15) | 0.0072 (14) | 0.0123 (14) | 0.0013 (13) |
N1—C7 | 1.264 (3) | C4—H4A | 0.9300 |
N1—C8 | 1.468 (3) | C5—C6 | 1.395 (4) |
N2—C10 | 1.141 (4) | C5—H5A | 0.9300 |
C1—C2 | 1.375 (4) | C6—C7 | 1.479 (4) |
C1—C6 | 1.391 (4) | C7—H7A | 0.9300 |
C1—H1A | 0.9300 | C8—C9 | 1.519 (3) |
C2—C3 | 1.398 (4) | C8—H8A | 0.9700 |
C2—H2A | 0.9300 | C8—H8B | 0.9700 |
C3—C4 | 1.386 (4) | C9—C8i | 1.519 (3) |
C3—C10 | 1.450 (4) | C9—H9A | 0.95 (3) |
C4—C5 | 1.380 (4) | ||
C7—N1—C8 | 116.8 (2) | C1—C6—C5 | 119.1 (3) |
C2—C1—C6 | 120.5 (3) | C1—C6—C7 | 122.0 (2) |
C2—C1—H1A | 119.7 | C5—C6—C7 | 118.9 (2) |
C6—C1—H1A | 119.7 | N1—C7—C6 | 122.3 (3) |
C1—C2—C3 | 119.8 (3) | N1—C7—H7A | 118.9 |
C1—C2—H2A | 120.1 | C6—C7—H7A | 118.9 |
C3—C2—H2A | 120.1 | N1—C8—C9 | 110.43 (19) |
C4—C3—C2 | 120.4 (3) | N1—C8—H8A | 109.6 |
C4—C3—C10 | 120.1 (3) | C9—C8—H8A | 109.6 |
C2—C3—C10 | 119.5 (3) | N1—C8—H8B | 109.6 |
C5—C4—C3 | 119.3 (3) | C9—C8—H8B | 109.6 |
C5—C4—H4A | 120.4 | H8A—C8—H8B | 108.1 |
C3—C4—H4A | 120.4 | C8—C9—C8i | 113.7 (3) |
C4—C5—C6 | 121.0 (3) | C8—C9—H9A | 110.8 (15) |
C4—C5—H5A | 119.5 | C8i—C9—H9A | 109.5 (15) |
C6—C5—H5A | 119.5 | N2—C10—C3 | 178.6 (4) |
C6—C1—C2—C3 | 0.5 (4) | C4—C5—C6—C7 | 177.7 (2) |
C1—C2—C3—C4 | −0.3 (4) | C8—N1—C7—C6 | 178.9 (2) |
C1—C2—C3—C10 | 179.6 (3) | C1—C6—C7—N1 | 3.5 (4) |
C2—C3—C4—C5 | −0.1 (4) | C5—C6—C7—N1 | −174.2 (3) |
C10—C3—C4—C5 | 180.0 (3) | C7—N1—C8—C9 | 123.5 (3) |
C3—C4—C5—C6 | 0.3 (4) | N1—C8—C9—C8i | −71.64 (19) |
C2—C1—C6—C5 | −0.4 (4) | C4—C3—C10—N2 | −179 (100) |
C2—C1—C6—C7 | −178.0 (3) | C2—C3—C10—N2 | 1 (14) |
C4—C5—C6—C1 | −0.1 (4) |
Symmetry code: (i) −x, y, −z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
C8—H8B···Cg1ii | 0.97 | 2.85 | 3.58 | 133 |
Symmetry code: (ii) x, −y, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | C19H16N4 |
Mr | 300.36 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 100 |
a, b, c (Å) | 14.4982 (4), 6.9025 (2), 16.9842 (6) |
β (°) | 111.659 (4) |
V (Å3) | 1579.67 (8) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.08 |
Crystal size (mm) | 0.37 × 0.12 × 0.12 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.886, 0.991 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 13317, 1544, 1257 |
Rint | 0.077 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.081, 0.127, 1.17 |
No. of reflections | 1544 |
No. of parameters | 109 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.18, −0.37 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2003).
D—H···A | D—H | H···A | D···A | D—H···A |
C8—H8B···Cg1i | 0.97 | 2.85 | 3.58 | 133 |
Symmetry code: (i) x, −y, z−1/2. |
Acknowledgements
HKF and RK thank the Malaysian Government and Universiti Sains Malaysia for Science Fund grant No. 305/PFIZIK/613312. RK thanks Universiti Sains Malaysia for a post-doctoral research fellowship. HK thanks PNU for financial support.
References
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Schiff bases are one of most prevalent mixed-donor ligands in coordination chemistry. They play an important role in the development of coordination chemistry related to catalysis and enzymatic reactions, magnetism, and supramolecular architectures. Structures of Schiff bases derived from substituted benzaldehydes and closely related to the title compound, (I), are known (Li et al., 2005; Bomfim et al., 2005; Glidewell et al., 2005, 2006; Sun et al., 2004; Habibi et al., 2007).
The molecule of (I), Fig. 1, has a crystallographic 2-fold symmetry. The bond lengths and angles are within normal ranges (Allen et al., 1987). The group is coplanar with the aromatic ring in each half of the molecule. The planar units are parallel by symmetry, but extend in opposite directions from the central methylene bridge, the C6—C7—N1—C8 torsion angle is 178.9 (3)°. The packing of the molecules, Fig. 2, is controlled by C—H···π interactions, Table 1.