organic compounds
Ethyl 4-(tert-butylamino)-3-nitrobenzoate
aSchool of Pharmaceutical Sciences, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, bSchool of Chemical Sciences, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, and cX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
*Correspondence e-mail: hkfun@usm.my
In the title compound, C13H18N2O4, intramolecular N—H⋯O, N—H⋯N and C—H⋯O (× 3) hydrogen bonds generate S(6) and S(5) ring motifs. There are two crystallographically independent molecules (A and B) in the The nitro group is coplanar with the benzene ring, with O—N—C—C torsion angles of −0.33 (13) and 0.93 (14)° in molecules A and B, respectively. In the neighbouring molecules are linked together by intermolecular C—H⋯O hydrogen bonds. In addition, the is stabilized by π–π interactions with centroid–centroid distances ranging from 3.7853 (6) to 3.8625 (6) Å.
Related literature
For literature on hydrogen-bond motifs, see: Bernstein et al. (1995). For values of bond lengths, see: Allen et al. (1987). For related literature, see, for example: Göker et al. (1998); Anderson (2005); Kakei et al. (1993).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2005); cell APEX2; data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2003).
Supporting information
10.1107/S160053680802206X/at2594sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053680802206X/at2594Isup2.hkl
Ethyl 4-fluoro-3-nitrobenzoate (200 mg, 0.93 mmol) was dissolved in dry dichloromethane (10 ml). N, N-diisopropylethylamine (DIPEA) (0.20 ml, 1.12 mmol) was added to the stirred mixture. Then, tert-butylamine (0.11 ml, 1.03 mmol) was added dropwise using syringe and stirred at room temperature under N2 overnight. After completion of the reaction, the mixture was washed with 10% NaCO3 (10 ml). The aqueous layer was washed with dichloromethane (3 x 15 ml). The organic layers were collected and dried over MgSO4 (anhydrous). The solvent was removed under reduced pressure to yield the crude product. Recrystallisation with hot hexane revealed the title compound (I) as bright yellow crystals.
The H-atoms attached to N2A and N2B were located from the difference Fourier map and refined as riding with the parent atom with an isotropic thermal parameter 1.2 times that of the parent atom. The rest of the hydrogen atoms were positioned geometrically [C—H = 0.95–98 Å] and refined using a riding model. A rotating-group model was used for the methyl groups. The highest peak is located 0.63 Å from C6B and the deepest hole is located 0.59 Å from N1A.
Data collection: APEX2 (Bruker, 2005); cell
APEX2 (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2003).Fig. 1. The molecular structure of the title compound, showing 50% probability displacement ellipsoids and the atomic numbering. Intramolecular hydrogen bonds are drawn as dashed lines. | |
Fig. 2. The crystal packing of (I), showing stacking arrangement viewed down the b-axis. Intramolecular and intermolecular interactions are drawn as dashed lines. |
C13H18N2O4 | F(000) = 1136 |
Mr = 266.29 | Dx = 1.299 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 9969 reflections |
a = 16.0471 (5) Å | θ = 2.5–30.1° |
b = 6.6417 (2) Å | µ = 0.10 mm−1 |
c = 30.0180 (9) Å | T = 100 K |
β = 121.688 (2)° | Plate, yellow |
V = 2722.37 (14) Å3 | 0.51 × 0.43 × 0.17 mm |
Z = 8 |
Bruker SMART APEXII CCD area-detector diffractometer | 8141 independent reflections |
Radiation source: fine-focus sealed tube | 6368 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.033 |
ϕ and ω scans | θmax = 30.3°, θmin = 1.5° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −21→22 |
Tmin = 0.879, Tmax = 0.984 | k = −9→9 |
63326 measured reflections | l = −41→42 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.047 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.133 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0652P)2 + 0.787P] where P = (Fo2 + 2Fc2)/3 |
8141 reflections | (Δ/σ)max = 0.001 |
351 parameters | Δρmax = 0.53 e Å−3 |
0 restraints | Δρmin = −0.24 e Å−3 |
C13H18N2O4 | V = 2722.37 (14) Å3 |
Mr = 266.29 | Z = 8 |
Monoclinic, P21/c | Mo Kα radiation |
a = 16.0471 (5) Å | µ = 0.10 mm−1 |
b = 6.6417 (2) Å | T = 100 K |
c = 30.0180 (9) Å | 0.51 × 0.43 × 0.17 mm |
β = 121.688 (2)° |
Bruker SMART APEXII CCD area-detector diffractometer | 8141 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 6368 reflections with I > 2σ(I) |
Tmin = 0.879, Tmax = 0.984 | Rint = 0.033 |
63326 measured reflections |
R[F2 > 2σ(F2)] = 0.047 | 0 restraints |
wR(F2) = 0.133 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.53 e Å−3 |
8141 reflections | Δρmin = −0.24 e Å−3 |
351 parameters |
Experimental. The low-temperature data was collected with the Oxford Cyrosystem Cobra low-temperature attachment. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1A | 1.01188 (6) | 0.50707 (13) | 0.90700 (3) | 0.02027 (18) | |
O2A | 0.87073 (6) | 0.53054 (14) | 0.90534 (3) | 0.02371 (19) | |
O3A | 0.57249 (6) | 0.54152 (13) | 0.73478 (3) | 0.02243 (18) | |
O4A | 0.56803 (6) | 0.54680 (13) | 0.66152 (3) | 0.02250 (18) | |
N1A | 0.61441 (6) | 0.54228 (13) | 0.71013 (4) | 0.01589 (18) | |
N2A | 0.73120 (6) | 0.54415 (13) | 0.66080 (3) | 0.01583 (18) | |
H2NA | 0.6682 | 0.5497 | 0.6444 | 0.019* | |
C1A | 0.76647 (7) | 0.53258 (15) | 0.79329 (4) | 0.0143 (2) | |
H1A | 0.7281 | 0.5335 | 0.8089 | 0.017* | |
C2A | 0.72036 (7) | 0.53705 (15) | 0.73898 (4) | 0.01349 (19) | |
C3A | 0.77441 (7) | 0.53716 (14) | 0.71324 (4) | 0.01347 (19) | |
C4A | 0.87825 (7) | 0.52932 (15) | 0.74731 (4) | 0.0151 (2) | |
H4A | 0.9180 | 0.5271 | 0.7325 | 0.018* | |
C5A | 0.92253 (7) | 0.52490 (15) | 0.80055 (4) | 0.0149 (2) | |
H5A | 0.9920 | 0.5204 | 0.8217 | 0.018* | |
C6A | 0.86747 (7) | 0.52682 (15) | 0.82473 (4) | 0.0142 (2) | |
C7A | 0.91408 (8) | 0.52224 (16) | 0.88226 (4) | 0.0159 (2) | |
C8A | 1.06291 (8) | 0.5008 (2) | 0.96363 (4) | 0.0252 (3) | |
H8A | 1.0412 | 0.3828 | 0.9751 | 0.030* | |
H8B | 1.0489 | 0.6242 | 0.9771 | 0.030* | |
C9A | 1.17025 (9) | 0.4861 (2) | 0.98412 (5) | 0.0347 (3) | |
H9A | 1.2069 | 0.4877 | 1.0225 | 0.052* | |
H9B | 1.1904 | 0.6006 | 0.9713 | 0.052* | |
H9C | 1.1837 | 0.3603 | 0.9720 | 0.052* | |
C10A | 0.77667 (8) | 0.54745 (16) | 0.62878 (4) | 0.0163 (2) | |
C11A | 0.83246 (8) | 0.35165 (17) | 0.63510 (4) | 0.0203 (2) | |
H11A | 0.7877 | 0.2370 | 0.6254 | 0.030* | |
H11B | 0.8861 | 0.3373 | 0.6716 | 0.030* | |
H11C | 0.8593 | 0.3555 | 0.6124 | 0.030* | |
C12A | 0.68959 (9) | 0.56150 (19) | 0.57218 (4) | 0.0233 (2) | |
H12A | 0.6458 | 0.4465 | 0.5647 | 0.035* | |
H12B | 0.7136 | 0.5600 | 0.5481 | 0.035* | |
H12C | 0.6537 | 0.6869 | 0.5676 | 0.035* | |
C13A | 0.84047 (8) | 0.73502 (17) | 0.64034 (4) | 0.0195 (2) | |
H13A | 0.8927 | 0.7359 | 0.6774 | 0.029* | |
H13B | 0.8000 | 0.8560 | 0.6324 | 0.029* | |
H13C | 0.8695 | 0.7331 | 0.6186 | 0.029* | |
O1B | 0.49200 (5) | 0.43211 (13) | 0.10402 (3) | 0.02139 (18) | |
O2B | 0.63293 (6) | 0.45058 (13) | 0.10484 (3) | 0.02286 (18) | |
O3B | 0.93204 (6) | 0.47400 (13) | 0.27341 (3) | 0.02111 (18) | |
O4B | 0.93898 (6) | 0.47557 (13) | 0.34743 (3) | 0.02151 (18) | |
N1B | 0.89147 (6) | 0.47252 (13) | 0.29872 (4) | 0.01529 (18) | |
N2B | 0.77682 (6) | 0.47199 (14) | 0.34950 (3) | 0.01565 (18) | |
H2NB | 0.8407 | 0.4767 | 0.3671 | 0.019* | |
C1B | 0.73817 (7) | 0.46115 (15) | 0.21633 (4) | 0.01401 (19) | |
H1B | 0.7757 | 0.4608 | 0.2002 | 0.017* | |
C2B | 0.78566 (7) | 0.46722 (15) | 0.27069 (4) | 0.01293 (19) | |
C3B | 0.73273 (7) | 0.46737 (15) | 0.29702 (4) | 0.01340 (19) | |
C4B | 0.62889 (8) | 0.46322 (16) | 0.26366 (4) | 0.0157 (2) | |
H4B | 0.5900 | 0.4645 | 0.2790 | 0.019* | |
C5B | 0.58317 (7) | 0.45740 (15) | 0.21029 (4) | 0.0154 (2) | |
H5B | 0.5137 | 0.4545 | 0.1895 | 0.019* | |
C6B | 0.63721 (7) | 0.45564 (15) | 0.18553 (4) | 0.01401 (19) | |
C7B | 0.58976 (8) | 0.44669 (16) | 0.12800 (4) | 0.0168 (2) | |
C8B | 0.43816 (8) | 0.4179 (2) | 0.04737 (4) | 0.0260 (3) | |
H8C | 0.3751 | 0.3484 | 0.0350 | 0.031* | |
H8D | 0.4762 | 0.3370 | 0.0365 | 0.031* | |
C9B | 0.41883 (9) | 0.6226 (2) | 0.02271 (5) | 0.0302 (3) | |
H9D | 0.3804 | 0.6089 | −0.0155 | 0.045* | |
H9E | 0.4812 | 0.6888 | 0.0335 | 0.045* | |
H9F | 0.3822 | 0.7038 | 0.0340 | 0.045* | |
C10B | 0.73206 (8) | 0.46992 (16) | 0.38189 (4) | 0.0172 (2) | |
C11B | 0.67381 (8) | 0.27595 (17) | 0.37340 (4) | 0.0217 (2) | |
H11D | 0.6189 | 0.2698 | 0.3370 | 0.032* | |
H11E | 0.6487 | 0.2747 | 0.3969 | 0.032* | |
H11F | 0.7166 | 0.1593 | 0.3809 | 0.032* | |
C12B | 0.81999 (9) | 0.47351 (19) | 0.43837 (4) | 0.0246 (2) | |
H12D | 0.8582 | 0.5964 | 0.4441 | 0.037* | |
H12E | 0.8613 | 0.3555 | 0.4445 | 0.037* | |
H12F | 0.7966 | 0.4710 | 0.4627 | 0.037* | |
C13B | 0.66997 (8) | 0.65807 (18) | 0.37269 (5) | 0.0222 (2) | |
H13D | 0.7108 | 0.7784 | 0.3806 | 0.033* | |
H13E | 0.6433 | 0.6541 | 0.3955 | 0.033* | |
H13F | 0.6160 | 0.6623 | 0.3360 | 0.033* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1A | 0.0132 (3) | 0.0327 (5) | 0.0134 (4) | 0.0004 (3) | 0.0059 (3) | −0.0014 (3) |
O2A | 0.0181 (4) | 0.0365 (5) | 0.0190 (4) | 0.0000 (3) | 0.0114 (3) | −0.0013 (3) |
O3A | 0.0154 (4) | 0.0298 (5) | 0.0260 (4) | 0.0006 (3) | 0.0135 (3) | 0.0003 (3) |
O4A | 0.0136 (4) | 0.0309 (5) | 0.0186 (4) | 0.0002 (3) | 0.0055 (3) | −0.0002 (3) |
N1A | 0.0126 (4) | 0.0142 (4) | 0.0205 (4) | −0.0004 (3) | 0.0084 (3) | −0.0004 (3) |
N2A | 0.0120 (4) | 0.0192 (4) | 0.0151 (4) | 0.0004 (3) | 0.0062 (3) | 0.0003 (3) |
C1A | 0.0149 (5) | 0.0111 (4) | 0.0189 (5) | −0.0006 (3) | 0.0104 (4) | −0.0004 (4) |
C2A | 0.0102 (4) | 0.0119 (5) | 0.0175 (5) | 0.0002 (3) | 0.0068 (4) | 0.0002 (4) |
C3A | 0.0135 (4) | 0.0099 (4) | 0.0168 (5) | −0.0006 (3) | 0.0078 (4) | −0.0003 (3) |
C4A | 0.0127 (4) | 0.0155 (5) | 0.0182 (5) | 0.0003 (4) | 0.0088 (4) | 0.0005 (4) |
C5A | 0.0124 (4) | 0.0145 (5) | 0.0175 (5) | 0.0003 (4) | 0.0076 (4) | 0.0006 (4) |
C6A | 0.0147 (5) | 0.0131 (5) | 0.0148 (5) | −0.0004 (4) | 0.0077 (4) | −0.0005 (4) |
C7A | 0.0140 (5) | 0.0160 (5) | 0.0170 (5) | −0.0009 (4) | 0.0075 (4) | −0.0013 (4) |
C8A | 0.0188 (5) | 0.0421 (7) | 0.0122 (5) | 0.0004 (5) | 0.0065 (4) | −0.0021 (5) |
C9A | 0.0184 (6) | 0.0630 (10) | 0.0180 (6) | 0.0030 (6) | 0.0063 (5) | −0.0027 (6) |
C10A | 0.0161 (5) | 0.0183 (5) | 0.0154 (5) | −0.0005 (4) | 0.0088 (4) | 0.0001 (4) |
C11A | 0.0208 (5) | 0.0181 (5) | 0.0240 (5) | −0.0002 (4) | 0.0131 (4) | −0.0028 (4) |
C12A | 0.0212 (5) | 0.0303 (6) | 0.0157 (5) | −0.0009 (5) | 0.0078 (4) | −0.0005 (4) |
C13A | 0.0205 (5) | 0.0190 (5) | 0.0203 (5) | −0.0011 (4) | 0.0116 (4) | 0.0018 (4) |
O1B | 0.0133 (4) | 0.0343 (5) | 0.0138 (4) | −0.0022 (3) | 0.0053 (3) | 0.0013 (3) |
O2B | 0.0181 (4) | 0.0339 (5) | 0.0178 (4) | 0.0012 (3) | 0.0102 (3) | −0.0004 (3) |
O3B | 0.0150 (4) | 0.0280 (4) | 0.0238 (4) | 0.0003 (3) | 0.0127 (3) | 0.0009 (3) |
O4B | 0.0136 (4) | 0.0302 (5) | 0.0164 (4) | 0.0002 (3) | 0.0049 (3) | 0.0004 (3) |
N1B | 0.0135 (4) | 0.0134 (4) | 0.0186 (4) | 0.0001 (3) | 0.0081 (3) | 0.0002 (3) |
N2B | 0.0129 (4) | 0.0195 (4) | 0.0143 (4) | 0.0001 (3) | 0.0070 (3) | 0.0001 (3) |
C1B | 0.0144 (4) | 0.0125 (5) | 0.0168 (5) | 0.0004 (3) | 0.0093 (4) | 0.0006 (4) |
C2B | 0.0108 (4) | 0.0113 (4) | 0.0166 (5) | 0.0003 (3) | 0.0072 (4) | 0.0007 (3) |
C3B | 0.0147 (5) | 0.0101 (4) | 0.0151 (5) | 0.0004 (3) | 0.0077 (4) | 0.0010 (3) |
C4B | 0.0137 (4) | 0.0173 (5) | 0.0185 (5) | 0.0004 (4) | 0.0100 (4) | 0.0005 (4) |
C5B | 0.0121 (4) | 0.0151 (5) | 0.0185 (5) | 0.0000 (4) | 0.0076 (4) | 0.0007 (4) |
C6B | 0.0135 (4) | 0.0133 (5) | 0.0148 (5) | 0.0000 (3) | 0.0071 (4) | 0.0009 (3) |
C7B | 0.0152 (5) | 0.0170 (5) | 0.0163 (5) | 0.0001 (4) | 0.0070 (4) | 0.0007 (4) |
C8B | 0.0176 (5) | 0.0410 (7) | 0.0148 (5) | −0.0037 (5) | 0.0055 (4) | −0.0017 (5) |
C9B | 0.0236 (6) | 0.0469 (8) | 0.0197 (6) | 0.0022 (5) | 0.0111 (5) | 0.0074 (5) |
C10B | 0.0194 (5) | 0.0187 (5) | 0.0158 (5) | 0.0009 (4) | 0.0107 (4) | 0.0007 (4) |
C11B | 0.0255 (6) | 0.0209 (5) | 0.0226 (5) | −0.0013 (4) | 0.0154 (5) | 0.0024 (4) |
C12B | 0.0265 (6) | 0.0306 (6) | 0.0152 (5) | 0.0009 (5) | 0.0099 (5) | 0.0008 (4) |
C13B | 0.0242 (5) | 0.0205 (5) | 0.0251 (6) | 0.0019 (4) | 0.0151 (5) | −0.0022 (4) |
O1A—C7A | 1.3418 (13) | O1B—C7B | 1.3424 (13) |
O1A—C8A | 1.4489 (13) | O1B—C8B | 1.4503 (13) |
O2A—C7A | 1.2136 (13) | O2B—C7B | 1.2125 (13) |
O3A—N1A | 1.2340 (12) | O3B—N1B | 1.2332 (12) |
O4A—N1A | 1.2424 (12) | O4B—N1B | 1.2443 (12) |
N1A—C2A | 1.4474 (13) | N1B—C2B | 1.4462 (13) |
N2A—C3A | 1.3470 (13) | N2B—C3B | 1.3463 (13) |
N2A—C10A | 1.4810 (13) | N2B—C10B | 1.4816 (13) |
N2A—H2NA | 0.8617 | N2B—H2NB | 0.8733 |
C1A—C6A | 1.3827 (14) | C1B—C6B | 1.3809 (14) |
C1A—C2A | 1.3925 (14) | C1B—C2B | 1.3924 (14) |
C1A—H1A | 0.9500 | C1B—H1B | 0.9500 |
C2A—C3A | 1.4328 (14) | C2B—C3B | 1.4321 (14) |
C3A—C4A | 1.4265 (14) | C3B—C4B | 1.4238 (14) |
C4A—C5A | 1.3663 (14) | C4B—C5B | 1.3683 (14) |
C4A—H4A | 0.9500 | C4B—H4B | 0.9500 |
C5A—C6A | 1.4076 (14) | C5B—C6B | 1.4076 (14) |
C5A—H5A | 0.9500 | C5B—H5B | 0.9500 |
C6A—C7A | 1.4784 (14) | C6B—C7B | 1.4778 (14) |
C8A—C9A | 1.4973 (17) | C8B—C9B | 1.5003 (19) |
C8A—H8A | 0.9900 | C8B—H8C | 0.9900 |
C8A—H8B | 0.9900 | C8B—H8D | 0.9900 |
C9A—H9A | 0.9800 | C9B—H9D | 0.9800 |
C9A—H9B | 0.9800 | C9B—H9E | 0.9800 |
C9A—H9C | 0.9800 | C9B—H9F | 0.9800 |
C10A—C13A | 1.5320 (15) | C10B—C13B | 1.5302 (15) |
C10A—C11A | 1.5331 (15) | C10B—C11B | 1.5323 (15) |
C10A—C12A | 1.5343 (15) | C10B—C12B | 1.5338 (15) |
C11A—H11A | 0.9800 | C11B—H11D | 0.9800 |
C11A—H11B | 0.9800 | C11B—H11E | 0.9800 |
C11A—H11C | 0.9800 | C11B—H11F | 0.9800 |
C12A—H12A | 0.9800 | C12B—H12D | 0.9800 |
C12A—H12B | 0.9800 | C12B—H12E | 0.9800 |
C12A—H12C | 0.9800 | C12B—H12F | 0.9800 |
C13A—H13A | 0.9800 | C13B—H13D | 0.9800 |
C13A—H13B | 0.9800 | C13B—H13E | 0.9800 |
C13A—H13C | 0.9800 | C13B—H13F | 0.9800 |
Cg1···Cg2i | 3.7853 (6) | Cg1···Cg2ii | 3.8625 (6) |
C7A—O1A—C8A | 115.30 (9) | C7B—O1B—C8B | 116.24 (9) |
O3A—N1A—O4A | 121.71 (9) | O3B—N1B—O4B | 121.87 (9) |
O3A—N1A—C2A | 118.70 (9) | O3B—N1B—C2B | 118.70 (9) |
O4A—N1A—C2A | 119.59 (9) | O4B—N1B—C2B | 119.43 (9) |
C3A—N2A—C10A | 129.22 (9) | C3B—N2B—C10B | 129.04 (9) |
C3A—N2A—H2NA | 113.4 | C3B—N2B—H2NB | 115.9 |
C10A—N2A—H2NA | 117.3 | C10B—N2B—H2NB | 115.0 |
C6A—C1A—C2A | 120.74 (9) | C6B—C1B—C2B | 120.85 (9) |
C6A—C1A—H1A | 119.6 | C6B—C1B—H1B | 119.6 |
C2A—C1A—H1A | 119.6 | C2B—C1B—H1B | 119.6 |
C1A—C2A—C3A | 122.10 (9) | C1B—C2B—C3B | 121.91 (9) |
C1A—C2A—N1A | 115.83 (9) | C1B—C2B—N1B | 115.79 (9) |
C3A—C2A—N1A | 122.07 (9) | C3B—C2B—N1B | 122.30 (9) |
N2A—C3A—C4A | 121.97 (9) | N2B—C3B—C4B | 121.65 (9) |
N2A—C3A—C2A | 122.98 (9) | N2B—C3B—C2B | 123.11 (9) |
C4A—C3A—C2A | 115.05 (9) | C4B—C3B—C2B | 115.23 (9) |
C5A—C4A—C3A | 122.23 (10) | C5B—C4B—C3B | 122.25 (9) |
C5A—C4A—H4A | 118.9 | C5B—C4B—H4B | 118.9 |
C3A—C4A—H4A | 118.9 | C3B—C4B—H4B | 118.9 |
C4A—C5A—C6A | 121.42 (9) | C4B—C5B—C6B | 121.22 (9) |
C4A—C5A—H5A | 119.3 | C4B—C5B—H5B | 119.4 |
C6A—C5A—H5A | 119.3 | C6B—C5B—H5B | 119.4 |
C1A—C6A—C5A | 118.45 (9) | C1B—C6B—C5B | 118.54 (9) |
C1A—C6A—C7A | 119.36 (9) | C1B—C6B—C7B | 119.12 (9) |
C5A—C6A—C7A | 122.19 (9) | C5B—C6B—C7B | 122.34 (9) |
O2A—C7A—O1A | 122.82 (10) | O2B—C7B—O1B | 123.56 (10) |
O2A—C7A—C6A | 125.16 (10) | O2B—C7B—C6B | 124.77 (10) |
O1A—C7A—C6A | 112.03 (9) | O1B—C7B—C6B | 111.67 (9) |
O1A—C8A—C9A | 107.65 (9) | O1B—C8B—C9B | 111.18 (11) |
O1A—C8A—H8A | 110.2 | O1B—C8B—H8C | 109.4 |
C9A—C8A—H8A | 110.2 | C9B—C8B—H8C | 109.4 |
O1A—C8A—H8B | 110.2 | O1B—C8B—H8D | 109.4 |
C9A—C8A—H8B | 110.2 | C9B—C8B—H8D | 109.4 |
H8A—C8A—H8B | 108.5 | H8C—C8B—H8D | 108.0 |
C8A—C9A—H9A | 109.5 | C8B—C9B—H9D | 109.5 |
C8A—C9A—H9B | 109.5 | C8B—C9B—H9E | 109.5 |
H9A—C9A—H9B | 109.5 | H9D—C9B—H9E | 109.5 |
C8A—C9A—H9C | 109.5 | C8B—C9B—H9F | 109.5 |
H9A—C9A—H9C | 109.5 | H9D—C9B—H9F | 109.5 |
H9B—C9A—H9C | 109.5 | H9E—C9B—H9F | 109.5 |
N2A—C10A—C13A | 111.31 (9) | N2B—C10B—C13B | 111.59 (9) |
N2A—C10A—C11A | 111.21 (9) | N2B—C10B—C11B | 111.24 (9) |
C13A—C10A—C11A | 112.61 (9) | C13B—C10B—C11B | 111.97 (9) |
N2A—C10A—C12A | 104.30 (8) | N2B—C10B—C12B | 104.10 (9) |
C13A—C10A—C12A | 108.24 (9) | C13B—C10B—C12B | 108.70 (9) |
C11A—C10A—C12A | 108.76 (9) | C11B—C10B—C12B | 108.88 (9) |
C10A—C11A—H11A | 109.5 | C10B—C11B—H11D | 109.5 |
C10A—C11A—H11B | 109.5 | C10B—C11B—H11E | 109.5 |
H11A—C11A—H11B | 109.5 | H11D—C11B—H11E | 109.5 |
C10A—C11A—H11C | 109.5 | C10B—C11B—H11F | 109.5 |
H11A—C11A—H11C | 109.5 | H11D—C11B—H11F | 109.5 |
H11B—C11A—H11C | 109.5 | H11E—C11B—H11F | 109.5 |
C10A—C12A—H12A | 109.5 | C10B—C12B—H12D | 109.5 |
C10A—C12A—H12B | 109.5 | C10B—C12B—H12E | 109.5 |
H12A—C12A—H12B | 109.5 | H12D—C12B—H12E | 109.5 |
C10A—C12A—H12C | 109.5 | C10B—C12B—H12F | 109.5 |
H12A—C12A—H12C | 109.5 | H12D—C12B—H12F | 109.5 |
H12B—C12A—H12C | 109.5 | H12E—C12B—H12F | 109.5 |
C10A—C13A—H13A | 109.5 | C10B—C13B—H13D | 109.5 |
C10A—C13A—H13B | 109.5 | C10B—C13B—H13E | 109.5 |
H13A—C13A—H13B | 109.5 | H13D—C13B—H13E | 109.5 |
C10A—C13A—H13C | 109.5 | C10B—C13B—H13F | 109.5 |
H13A—C13A—H13C | 109.5 | H13D—C13B—H13F | 109.5 |
H13B—C13A—H13C | 109.5 | H13E—C13B—H13F | 109.5 |
Symmetry codes: (i) x, −y−1/2, z−1/2; (ii) x, −y+1/2, z−1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N2A—H2NA···O4A | 0.86 | 1.93 | 2.6299 (15) | 138 |
N2A—H2NA···N1A | 0.86 | 2.54 | 2.9361 (15) | 109 |
N2B—H2NB···O4B | 0.87 | 1.95 | 2.6355 (15) | 134 |
N2B—H2NB···N1B | 0.87 | 2.58 | 2.9419 (15) | 106 |
C1A—H1A···O3A | 0.95 | 2.31 | 2.6522 (16) | 100 |
C1B—H1B···O3B | 0.95 | 2.31 | 2.6498 (16) | 100 |
C4A—H4A···O3Biii | 0.95 | 2.50 | 3.4124 (17) | 160 |
C4B—H4B···O3Aiv | 0.95 | 2.42 | 3.2566 (18) | 147 |
C5A—H5A···O1A | 0.95 | 2.41 | 2.7326 (13) | 100 |
C11A—H11A···O2Bv | 0.98 | 2.55 | 3.4714 (17) | 157 |
C11B—H11F···O2Aii | 0.98 | 2.52 | 3.4446 (17) | 158 |
C13B—H13D···O2Avi | 0.98 | 2.60 | 3.5071 (17) | 154 |
Symmetry codes: (ii) x, −y+1/2, z−1/2; (iii) −x+2, −y+1, −z+1; (iv) −x+1, −y+1, −z+1; (v) x, −y+1/2, z+1/2; (vi) x, −y+3/2, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | C13H18N2O4 |
Mr | 266.29 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 16.0471 (5), 6.6417 (2), 30.0180 (9) |
β (°) | 121.688 (2) |
V (Å3) | 2722.37 (14) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.51 × 0.43 × 0.17 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.879, 0.984 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 63326, 8141, 6368 |
Rint | 0.033 |
(sin θ/λ)max (Å−1) | 0.709 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.047, 0.133, 1.04 |
No. of reflections | 8141 |
No. of parameters | 351 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.53, −0.24 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2003).
Cg1···Cg2i | 3.7853 (6) | Cg1···Cg2ii | 3.8625 (6) |
Symmetry codes: (i) x, −y−1/2, z−1/2; (ii) x, −y+1/2, z−1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N2A—H2NA···O4A | 0.8600 | 1.9300 | 2.6299 (15) | 138.00 |
N2A—H2NA···N1A | 0.8600 | 2.5400 | 2.9361 (15) | 109.00 |
N2B—H2NB···O4B | 0.8700 | 1.9500 | 2.6355 (15) | 134.00 |
N2B—H2NB···N1B | 0.8700 | 2.5800 | 2.9419 (15) | 106.00 |
C1A—H1A···O3A | 0.9500 | 2.3100 | 2.6522 (16) | 100.00 |
C1B—H1B···O3B | 0.9500 | 2.3100 | 2.6498 (16) | 100.00 |
C4A—H4A···O3Biii | 0.9500 | 2.5000 | 3.4124 (17) | 160.00 |
C4B—H4B···O3Aiv | 0.9500 | 2.4200 | 3.2566 (18) | 147.00 |
C5A—H5A···O1A | 0.9500 | 2.4100 | 2.7326 (13) | 100.00 |
C11A—H11A···O2Bv | 0.9800 | 2.5500 | 3.4714 (17) | 157.00 |
C11B—H11F···O2Aii | 0.9800 | 2.5200 | 3.4446 (17) | 158.00 |
C13B—H13D···O2Avi | 0.9800 | 2.6000 | 3.5071 (17) | 154.00 |
Symmetry codes: (ii) x, −y+1/2, z−1/2; (iii) −x+2, −y+1, −z+1; (iv) −x+1, −y+1, −z+1; (v) x, −y+1/2, z+1/2; (vi) x, −y+3/2, z−1/2. |
Footnotes
‡Additional correspondence author, e-mail: aisyah@usm.my.
Acknowledgements
We are grateful to the Malaysian Government and Universiti Sains Malaysia (USM) for financial support given under the USM Research University funding (1001/PFARMASI/815026). HKF and RK thank the Malaysian Government and Universiti Sains Malaysia for the Science Fund grant No. 305/PFIZIK/ 613312. RK thanks Universiti Sains Malaysia for a postdoctoral research fellowship.
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
As a part of our ongoing studies on new nitro benzoic acid derivatives, we have synthesized the title compound (I) employing a modified protocol of previous procedure (Göker et al., 1998). The nitro benzoic acid intermediates are a convenient starting material for the synthesis of heterocycles targeting important biological processes, e.g. antifungal (Fluconazole) (Anderson, 2005) and proton pump inhibitor (Omeprazole) (Kakei et al., 1993). The crystal structure of the tert-butylamino functionalized nitro benzoic acid (I) has been determined, and herein, we present a full report on its crystal structure.
In the title compound (I) (Fig. 1), intramolecular N—H···O (x 2), N—H···N (x 2), and C—H···O (x 3) hydrogen bonds (Table 2) generate S(6) and S(5) ring motifs, respectively (Bernstein et al., 1995). There are two crystallographically independent molecules, A and B in the asymmetric unit of the title compound. The nitro group is coplanar with the benzene ring with torsion angle of -0.33 (13) and 0.93 (14)° in the molecule A and B, respectively. In the crystal structure neighbouring molecules are linked together by intermolecular C—H···O hydrogen bonds (Table 1). In the crystal packing (Table 2 & Fig. 2), molecules are stacked down the b axis, being consolidated by π–π interactions with centroid to centroid distances ranging from 3.7853 (6) – 3.8625 (6) Å.
The crystal structure is stabilized by intramolecular N—H···O (x 2), N—H···N (x 2), C—H···O (x 3), and intermolecular C—H···O (x 5) hydrogen bonds and π–π interactions.