organic compounds
4-[(E)-2-Furylmethyleneamino]-3-phenyl-1H-1,2,4-triazole-5(4H)-thione
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, bDepartment of Studies in Chemistry, Mangalore University, Mangalagangotri, Mangalore 574 199, India, and cDepartment of Studies in Physics, Mangalore University, Mangalagangotri, Mangalore 574 199, India
*Correspondence e-mail: hkfun@usm.my
In the title molecule, C13H10N4OS, the triazole ring makes dihedral angles of 16.14 (9) and 58.51 (11)°, respectively, with the phenyl and furan rings. Intramolecular C—H⋯N hydrogen bonds generate S(5) and S(6) ring motifs. In the centrosymmetrically related molecules are linked via N—H⋯S hydrogen bonds to form dimeric pairs, which are interlinked via C—H⋯O and C—H⋯π interactions.
Related literature
For the biological activities of triazole derivatives, see: Clemons et al. (2004); Glerman et al. (1997); Holla et al. (2003); Johnston (2002); Kane et al. (1990); Kkgzel et al. (2004); Modzelewska & Kalabun (1999); Rollas et al. (1993); Shujuan et al. (2004); For bond-length data, see: Allen et al. (1987). For graph-set analysis of hydrogen bonding, see: Bernstein et al. (1995).
Experimental
Crystal data
|
Refinement
|
Data collection: APEX2 (Bruker, 2005); cell APEX2; data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2003).
Supporting information
10.1107/S1600536808021806/ci2631sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808021806/ci2631Isup2.hkl
The title Schiff base compound was obtained by refluxing a mixture of 4-amino-5-methyl-2,4-dihydro-3H-1,2,4-triazole-3-thione (0.01 mol), furfural (0.01 mol) in ethanol (30 ml) and 2 drops of concentrated H2SO4 for 3 h. The solid product obtained was collected by filtration, washed with ethanol and dried. Single crystals suitable for X-ray analysis were obtained from acetone-N,N-dimethylformamide (DMF) (1:2) solution by slow evaporation (yield 63%; m.p. 451–453 K). Analysis for C13H10N4SO, found (calculated) in %: C 57.63 (57.77), H 3.62 (3.7), N 20.6 (20.74), S 11.79 (11.85).
The N-bound H atom was located in a difference map and refined with a N-H distance restraint of 0.85 (1) Å. C-bound H atoms were positioned geometrically [C-H = 0.93%A] and refined using a riding model, with Uiso(H) = 1.2Ueq(C).
Data collection: APEX2 (Bruker, 2005); cell
APEX2 (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2003).Fig. 1. The molecular structure of the title compound, showing 50% probability displacement ellipsoids and the atom-numbering scheme. | |
Fig. 2. The crystal packing of the title compound, viewed along the b axis. Hydrogen bonds are shown as dashed lines. |
C13H10N4OS | F(000) = 1120 |
Mr = 270.31 | Dx = 1.464 Mg m−3 |
Orthorhombic, Pbcn | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2n 2ab | Cell parameters from 5448 reflections |
a = 27.4006 (6) Å | θ = 2.9–27.9° |
b = 11.4940 (3) Å | µ = 0.26 mm−1 |
c = 7.7886 (2) Å | T = 100 K |
V = 2452.96 (10) Å3 | Block, orange |
Z = 8 | 0.40 × 0.13 × 0.10 mm |
Bruker SMART APEXII CCD area-detector diffractometer | 3627 independent reflections |
Radiation source: fine-focus sealed tube | 2573 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.072 |
ϕ and ω scans | θmax = 30.2°, θmin = 2.9° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −38→38 |
Tmin = 0.829, Tmax = 0.974 | k = −16→16 |
40042 measured reflections | l = −10→10 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.043 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.125 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0649P)2 + 0.3858P] where P = (Fo2 + 2Fc2)/3 |
3627 reflections | (Δ/σ)max = 0.001 |
176 parameters | Δρmax = 0.26 e Å−3 |
1 restraint | Δρmin = −0.32 e Å−3 |
C13H10N4OS | V = 2452.96 (10) Å3 |
Mr = 270.31 | Z = 8 |
Orthorhombic, Pbcn | Mo Kα radiation |
a = 27.4006 (6) Å | µ = 0.26 mm−1 |
b = 11.4940 (3) Å | T = 100 K |
c = 7.7886 (2) Å | 0.40 × 0.13 × 0.10 mm |
Bruker SMART APEXII CCD area-detector diffractometer | 3627 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 2573 reflections with I > 2σ(I) |
Tmin = 0.829, Tmax = 0.974 | Rint = 0.072 |
40042 measured reflections |
R[F2 > 2σ(F2)] = 0.043 | 1 restraint |
wR(F2) = 0.125 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | Δρmax = 0.26 e Å−3 |
3627 reflections | Δρmin = −0.32 e Å−3 |
176 parameters |
Experimental. The data was collected with the Oxford Cyrosystem Cobra low-temperature attachment. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.494570 (15) | 0.69781 (4) | 0.50297 (6) | 0.02259 (13) | |
O1 | 0.36669 (4) | 1.02453 (10) | 0.58350 (18) | 0.0258 (3) | |
N1 | 0.44316 (5) | 0.52097 (12) | 0.6503 (2) | 0.0225 (3) | |
N2 | 0.39895 (5) | 0.49428 (12) | 0.7222 (2) | 0.0228 (3) | |
N3 | 0.40473 (5) | 0.68093 (11) | 0.66047 (19) | 0.0190 (3) | |
N4 | 0.38912 (5) | 0.79579 (12) | 0.6319 (2) | 0.0206 (3) | |
C1 | 0.44803 (6) | 0.63262 (15) | 0.6058 (2) | 0.0203 (3) | |
C2 | 0.37554 (6) | 0.59359 (14) | 0.7269 (2) | 0.0204 (4) | |
C3 | 0.32509 (6) | 0.60514 (14) | 0.7901 (2) | 0.0198 (3) | |
C4 | 0.30539 (6) | 0.51246 (15) | 0.8824 (2) | 0.0244 (4) | |
H4A | 0.3247 | 0.4484 | 0.9086 | 0.029* | |
C5 | 0.25719 (6) | 0.51543 (16) | 0.9351 (3) | 0.0267 (4) | |
H5A | 0.2444 | 0.4533 | 0.9971 | 0.032* | |
C6 | 0.22781 (6) | 0.60973 (16) | 0.8967 (2) | 0.0259 (4) | |
H6A | 0.1954 | 0.6111 | 0.9320 | 0.031* | |
C7 | 0.24716 (6) | 0.70213 (16) | 0.8051 (3) | 0.0255 (4) | |
H7A | 0.2275 | 0.7656 | 0.7783 | 0.031* | |
C8 | 0.29558 (6) | 0.70074 (15) | 0.7530 (2) | 0.0229 (4) | |
H8A | 0.3084 | 0.7637 | 0.6931 | 0.028* | |
C9 | 0.41795 (6) | 0.87250 (15) | 0.6957 (2) | 0.0212 (4) | |
H9A | 0.4458 | 0.8494 | 0.7548 | 0.025* | |
C10 | 0.40718 (6) | 0.99364 (15) | 0.6757 (2) | 0.0214 (4) | |
C11 | 0.42966 (7) | 1.08948 (16) | 0.7401 (3) | 0.0268 (4) | |
H11A | 0.4578 | 1.0913 | 0.8067 | 0.032* | |
C12 | 0.40148 (7) | 1.18664 (15) | 0.6854 (3) | 0.0282 (4) | |
H12A | 0.4075 | 1.2646 | 0.7095 | 0.034* | |
C13 | 0.36459 (7) | 1.14332 (15) | 0.5921 (3) | 0.0289 (4) | |
H13A | 0.3406 | 1.1883 | 0.5399 | 0.035* | |
H1N1 | 0.4628 (6) | 0.4674 (14) | 0.619 (3) | 0.034 (6)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0170 (2) | 0.0210 (2) | 0.0298 (3) | 0.00050 (15) | 0.00408 (17) | 0.00147 (18) |
O1 | 0.0210 (6) | 0.0219 (6) | 0.0344 (8) | 0.0019 (5) | −0.0013 (5) | 0.0001 (6) |
N1 | 0.0169 (7) | 0.0191 (7) | 0.0316 (9) | 0.0034 (5) | 0.0022 (6) | 0.0014 (6) |
N2 | 0.0161 (7) | 0.0206 (7) | 0.0317 (9) | 0.0010 (5) | 0.0025 (6) | 0.0013 (6) |
N3 | 0.0153 (6) | 0.0172 (7) | 0.0244 (8) | 0.0004 (5) | −0.0002 (6) | 0.0008 (6) |
N4 | 0.0185 (6) | 0.0173 (7) | 0.0260 (8) | 0.0016 (5) | 0.0010 (6) | 0.0015 (6) |
C1 | 0.0170 (7) | 0.0208 (8) | 0.0232 (9) | 0.0014 (6) | −0.0020 (6) | −0.0018 (7) |
C2 | 0.0182 (8) | 0.0182 (8) | 0.0247 (9) | −0.0013 (6) | −0.0014 (7) | 0.0010 (7) |
C3 | 0.0167 (7) | 0.0215 (8) | 0.0212 (8) | −0.0018 (6) | −0.0011 (6) | −0.0011 (7) |
C4 | 0.0214 (8) | 0.0256 (9) | 0.0262 (9) | 0.0001 (7) | 0.0001 (7) | 0.0040 (7) |
C5 | 0.0240 (8) | 0.0306 (10) | 0.0255 (9) | −0.0038 (7) | 0.0025 (7) | 0.0058 (8) |
C6 | 0.0199 (8) | 0.0320 (10) | 0.0259 (9) | −0.0012 (7) | 0.0031 (7) | −0.0031 (8) |
C7 | 0.0180 (8) | 0.0231 (9) | 0.0353 (10) | 0.0026 (7) | 0.0003 (7) | −0.0044 (8) |
C8 | 0.0206 (8) | 0.0204 (8) | 0.0279 (10) | −0.0013 (6) | 0.0008 (7) | 0.0008 (7) |
C9 | 0.0161 (7) | 0.0240 (8) | 0.0236 (9) | 0.0006 (6) | 0.0024 (7) | 0.0003 (7) |
C10 | 0.0169 (7) | 0.0235 (9) | 0.0238 (9) | −0.0008 (6) | 0.0028 (7) | −0.0001 (7) |
C11 | 0.0214 (8) | 0.0254 (9) | 0.0334 (10) | −0.0042 (7) | 0.0033 (7) | −0.0027 (8) |
C12 | 0.0280 (9) | 0.0199 (9) | 0.0366 (11) | −0.0031 (7) | 0.0106 (8) | −0.0019 (8) |
C13 | 0.0280 (9) | 0.0216 (9) | 0.0372 (11) | 0.0054 (7) | 0.0072 (8) | 0.0050 (8) |
S1—C1 | 1.6820 (17) | C5—C6 | 1.383 (3) |
O1—C13 | 1.368 (2) | C5—H5A | 0.93 |
O1—C10 | 1.368 (2) | C6—C7 | 1.385 (3) |
N1—C1 | 1.336 (2) | C6—H6A | 0.93 |
N1—N2 | 1.369 (2) | C7—C8 | 1.388 (2) |
N1—H1N1 | 0.853 (9) | C7—H7A | 0.93 |
N2—C2 | 1.310 (2) | C8—H8A | 0.93 |
N3—C1 | 1.377 (2) | C9—C10 | 1.432 (2) |
N3—C2 | 1.384 (2) | C9—H9A | 0.93 |
N3—N4 | 1.4054 (18) | C10—C11 | 1.358 (2) |
N4—C9 | 1.284 (2) | C11—C12 | 1.423 (3) |
C2—C3 | 1.474 (2) | C11—H11A | 0.93 |
C3—C4 | 1.394 (2) | C12—C13 | 1.341 (3) |
C3—C8 | 1.395 (2) | C12—H12A | 0.93 |
C4—C5 | 1.384 (2) | C13—H13A | 0.93 |
C4—H4A | 0.93 | ||
C13—O1—C10 | 105.50 (14) | C5—C6—C7 | 119.33 (16) |
C1—N1—N2 | 114.19 (14) | C5—C6—H6A | 120.3 |
C1—N1—H1N1 | 123.8 (15) | C7—C6—H6A | 120.3 |
N2—N1—H1N1 | 120.9 (15) | C6—C7—C8 | 120.52 (17) |
C2—N2—N1 | 104.44 (13) | C6—C7—H7A | 119.7 |
C1—N3—C2 | 108.72 (13) | C8—C7—H7A | 119.7 |
C1—N3—N4 | 126.29 (13) | C7—C8—C3 | 120.18 (16) |
C2—N3—N4 | 124.37 (13) | C7—C8—H8A | 119.9 |
C9—N4—N3 | 113.36 (14) | C3—C8—H8A | 119.9 |
N1—C1—N3 | 102.77 (14) | N4—C9—C10 | 119.92 (16) |
N1—C1—S1 | 128.84 (13) | N4—C9—H9A | 120.0 |
N3—C1—S1 | 128.36 (13) | C10—C9—H9A | 120.0 |
N2—C2—N3 | 109.79 (14) | C11—C10—O1 | 110.56 (15) |
N2—C2—C3 | 123.18 (15) | C11—C10—C9 | 130.92 (17) |
N3—C2—C3 | 127.01 (15) | O1—C10—C9 | 118.46 (15) |
C4—C3—C8 | 119.00 (15) | C10—C11—C12 | 106.24 (17) |
C4—C3—C2 | 117.83 (15) | C10—C11—H11A | 126.9 |
C8—C3—C2 | 123.05 (15) | C12—C11—H11A | 126.9 |
C5—C4—C3 | 120.26 (16) | C13—C12—C11 | 106.25 (16) |
C5—C4—H4A | 119.9 | C13—C12—H12A | 126.9 |
C3—C4—H4A | 119.9 | C11—C12—H12A | 126.9 |
C6—C5—C4 | 120.71 (17) | C12—C13—O1 | 111.45 (16) |
C6—C5—H5A | 119.6 | C12—C13—H13A | 124.3 |
C4—C5—H5A | 119.6 | O1—C13—H13A | 124.3 |
C1—N1—N2—C2 | −1.5 (2) | C8—C3—C4—C5 | 0.4 (3) |
C1—N3—N4—C9 | −60.1 (2) | C2—C3—C4—C5 | −175.78 (17) |
C2—N3—N4—C9 | 129.83 (18) | C3—C4—C5—C6 | 0.3 (3) |
N2—N1—C1—N3 | 2.8 (2) | C4—C5—C6—C7 | −0.3 (3) |
N2—N1—C1—S1 | −175.45 (13) | C5—C6—C7—C8 | −0.3 (3) |
C2—N3—C1—N1 | −2.91 (19) | C6—C7—C8—C3 | 1.0 (3) |
N4—N3—C1—N1 | −174.24 (15) | C4—C3—C8—C7 | −1.0 (3) |
C2—N3—C1—S1 | 175.32 (14) | C2—C3—C8—C7 | 174.91 (17) |
N4—N3—C1—S1 | 4.0 (3) | N3—N4—C9—C10 | 179.42 (14) |
N1—N2—C2—N3 | −0.50 (19) | C13—O1—C10—C11 | 0.1 (2) |
N1—N2—C2—C3 | 177.88 (17) | C13—O1—C10—C9 | 177.54 (16) |
C1—N3—C2—N2 | 2.2 (2) | N4—C9—C10—C11 | 174.88 (19) |
N4—N3—C2—N2 | 173.76 (15) | N4—C9—C10—O1 | −2.0 (3) |
C1—N3—C2—C3 | −176.07 (17) | O1—C10—C11—C12 | 0.1 (2) |
N4—N3—C2—C3 | −4.5 (3) | C9—C10—C11—C12 | −176.88 (18) |
N2—C2—C3—C4 | 14.2 (3) | C10—C11—C12—C13 | −0.3 (2) |
N3—C2—C3—C4 | −167.70 (17) | C11—C12—C13—O1 | 0.4 (2) |
N2—C2—C3—C8 | −161.76 (17) | C10—O1—C13—C12 | −0.3 (2) |
N3—C2—C3—C8 | 16.3 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N1···S1i | 0.85 (2) | 2.42 (2) | 3.265 (2) | 169 (2) |
C4—H4A···N2 | 0.93 | 2.55 | 2.859 (2) | 100 |
C6—H6A···O1ii | 0.93 | 2.59 | 3.347 (2) | 139 |
C8—H8A···N4 | 0.93 | 2.29 | 2.942 (2) | 126 |
C5—H5A···Cg1iii | 0.93 | 2.92 | 3.522 (2) | 123 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1/2, −y+3/2, z+1/2; (iii) −x−1/2, y+1/2, z. |
Experimental details
Crystal data | |
Chemical formula | C13H10N4OS |
Mr | 270.31 |
Crystal system, space group | Orthorhombic, Pbcn |
Temperature (K) | 100 |
a, b, c (Å) | 27.4006 (6), 11.4940 (3), 7.7886 (2) |
V (Å3) | 2452.96 (10) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.26 |
Crystal size (mm) | 0.40 × 0.13 × 0.10 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.829, 0.974 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 40042, 3627, 2573 |
Rint | 0.072 |
(sin θ/λ)max (Å−1) | 0.708 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.043, 0.125, 1.06 |
No. of reflections | 3627 |
No. of parameters | 176 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.26, −0.32 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2003).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N1···S1i | 0.85 (2) | 2.42 (2) | 3.265 (2) | 169 (2) |
C4—H4A···N2 | 0.93 | 2.55 | 2.859 (2) | 100 |
C6—H6A···O1ii | 0.93 | 2.59 | 3.347 (2) | 139 |
C8—H8A···N4 | 0.93 | 2.29 | 2.942 (2) | 126 |
C5—H5A···Cg1iii | 0.93 | 2.92 | 3.522 (2) | 123 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1/2, −y+3/2, z+1/2; (iii) −x−1/2, y+1/2, z. |
Footnotes
‡Permanent address: Department of Physics, Karunya University, Karunya Nagar, Coimbatore 641 114, India.
Acknowledgements
HKF and SRJ thank the Malaysian Government and Universiti Sains Malaysia for the Science Fund grant No. 305/PFIZIK/613312. SRJ thanks the Universiti Sains Malaysia for a postdoctoral research fellowship.
References
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1,2,4-Triazoles and their derivatives are found to be associated with various biological activities such as anticonvulsant (Kane et al., 1990; Kkgzel et al., 2004), antifungal (Rollas et al., 1993), anticancer (Holla et al., 2003), anti-inflammatory (Modzelewska & Kalabun, 1999) and antibacterial properties (Glerman et al., 1997). Several compounds containing 1,2,4-triazole rings are well known as drugs. For example, fluconazole is used as an antimicrobial drug (Shujuan et al., 2004), while vorozole, letrozole and anastrozole are non-steroidal drugs used for the threatment of cancer (Clemons et al., 2004) and loreclezole is used as an anticonvulsant (Johnston, 2002) drug. In view of the above properties, we have synthesized the title compound and report here its crystal structure.
Bond lengths and angles in the title molecule (Fig. 1) are found to have normal values (Allen et al., 1987). The furan ring is planar to within ±0.002 (2) Å and the triazole ring is also planar with a maximum deviation of 0.016 (2) Å for atom C1. The triazole and phenyl rings are twisted away from each other by an angle of 16.14 (9)°. The dihedral angle between the furan and triazole rings is 58.51 (11)°. Intramolecular C—H···N hydrogen bonds generate S(5) and S(6) ring motifs (Bernstein et al., 1995).
The crystal structure is stabilized by intermolecular C—H···O and N—H···S hydrogen bonds together with C—H···π interactions involving the phenyl ring. The centrosymmetrically related molecules are linked by N—H···S hydrogen bonds to form a dimeric pair (Fig. 2) which are interlinked via C—H···O hydrogen bonds.