organic compounds
3,3′-(Butane-1,4-diyl)diimidazole-1,1′-diium bis(triiodide)
aCollege of Chemistry and Materials Science, Heilongjiang University, Harbin 150080, People's Republic of China
*Correspondence e-mail: hgf1000@163.com
The cations and anions of the salt, C10H16N42+·2I3−, are linked by N—H⋯I hydrogen bonds and π–π stacking interactions(with interplanar distances of 3.575 and 3.528 Å) into a three-dimensional supramolecular network. The contains two anions and two half-cations; each cation is centrosymmetric.
Related literature
For literature on 1,1′-(1,4-butanediyl)diimidazole, see: Ma et al. (2003). For the structure of another 1,1′-(1,4-butanediyl)diimidazole-3,3′-diium salt, see: Yu et al. (2008).
Experimental
Crystal data
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Refinement
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Data collection: RAPID-AUTO (Rigaku, 1998); cell RAPID-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536808022393/ng2463sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808022393/ng2463Isup2.hkl
1,1'-(1,4-Butanediyl)diimidazole was prepared of imidazole and 1,4-dibromobutane in dimethylsulfoxide solution (Ma et al.., 2003). CuI (0.380 g, 2 mmol) and 1,1'-(1,4-butanediyl)diimidazole (0.380 g, 2 mmol) were dissolved in hot methanol solution (15 ml) and added two drops hydrochloric acid then a clear solution was obtained. The resulting solution was allowed to stand in a desiccator at room temperature for several days. Yellow crystals of (I) were obtained. Unexpectedly, the salt-type adducts of this ligands was crystallized from solution.
H atoms bound to C atoms were placed in calculated positions and treated as riding on their parent atoms, with C—H = 0.93 Å (Caromatic); C—H = 0.97 Å (methylene) and with Uiso(H) = 1.2Ueq(C). The N-bound H atoms were located in a difference Fourier map and refined with N—H = 0.85 Å, Uiso(H) = 1.2Ueq(N). The final different Fourier map had a large peak in the vicinity of the iodine atoms.
Data collection: RAPID-AUTO (Rigaku, 1998); cell
RAPID-AUTO (Rigaku, 1998); data reduction: CrystalStructure (Rigaku/MSC, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).C10H16N42+·2I3− | Z = 2 |
Mr = 953.67 | F(000) = 844 |
Triclinic, P1 | Dx = 2.877 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 8.4753 (17) Å | Cell parameters from 7434 reflections |
b = 9.7177 (19) Å | θ = 3.0–27.5° |
c = 14.110 (3) Å | µ = 8.46 mm−1 |
α = 95.77 (3)° | T = 291 K |
β = 92.82 (3)° | Block, yellow |
γ = 107.17 (3)° | 0.21 × 0.20 × 0.18 mm |
V = 1100.9 (4) Å3 |
Rigaku R-AXIS RAPID diffractometer | 3831 independent reflections |
Radiation source: fine-focus sealed tube | 3045 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.031 |
ω scans | θmax = 25.0°, θmin = 3.0° |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | h = −10→10 |
Tmin = 0.266, Tmax = 0.307 | k = −11→11 |
8492 measured reflections | l = −16→16 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.035 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.087 | H-atom parameters constrained |
S = 1.10 | w = 1/[σ2(Fo2) + (0.0254P)2 + 5.2161P] where P = (Fo2 + 2Fc2)/3 |
3831 reflections | (Δ/σ)max = 0.001 |
178 parameters | Δρmax = 1.19 e Å−3 |
0 restraints | Δρmin = −0.86 e Å−3 |
C10H16N42+·2I3− | γ = 107.17 (3)° |
Mr = 953.67 | V = 1100.9 (4) Å3 |
Triclinic, P1 | Z = 2 |
a = 8.4753 (17) Å | Mo Kα radiation |
b = 9.7177 (19) Å | µ = 8.46 mm−1 |
c = 14.110 (3) Å | T = 291 K |
α = 95.77 (3)° | 0.21 × 0.20 × 0.18 mm |
β = 92.82 (3)° |
Rigaku R-AXIS RAPID diffractometer | 3831 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 3045 reflections with I > 2σ(I) |
Tmin = 0.266, Tmax = 0.307 | Rint = 0.031 |
8492 measured reflections |
R[F2 > 2σ(F2)] = 0.035 | 0 restraints |
wR(F2) = 0.087 | H-atom parameters constrained |
S = 1.10 | Δρmax = 1.19 e Å−3 |
3831 reflections | Δρmin = −0.86 e Å−3 |
178 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.6046 (11) | 0.3684 (10) | 0.5506 (6) | 0.049 (2) | |
H1 | 0.7142 | 0.3830 | 0.5369 | 0.058* | |
C2 | 0.5511 (12) | 0.4469 (11) | 0.6176 (7) | 0.055 (2) | |
H2 | 0.6159 | 0.5268 | 0.6585 | 0.066* | |
C3 | 0.3377 (12) | 0.2777 (12) | 0.5469 (7) | 0.056 (2) | |
H4 | 0.2293 | 0.2191 | 0.5305 | 0.067* | |
C4 | 0.4772 (13) | 0.1552 (11) | 0.4282 (6) | 0.057 (3) | |
H6 | 0.5458 | 0.2028 | 0.3808 | 0.069* | |
H5 | 0.3664 | 0.1090 | 0.3977 | 0.069* | |
C5 | 0.5466 (12) | 0.0400 (11) | 0.4628 (7) | 0.062 (3) | |
H8 | 0.5474 | −0.0293 | 0.4085 | 0.075* | |
H7 | 0.6605 | 0.0860 | 0.4884 | 0.075* | |
C6 | 1.0068 (12) | 0.3316 (11) | 0.1048 (7) | 0.055 (2) | |
H9 | 0.9362 | 0.2915 | 0.1499 | 0.066* | |
C7 | 1.1312 (11) | 0.4573 (11) | 0.1195 (8) | 0.057 (3) | |
H10 | 1.1636 | 0.5208 | 0.1758 | 0.068* | |
C8 | 1.1230 (13) | 0.3611 (11) | −0.0302 (7) | 0.056 (3) | |
H12 | 1.1490 | 0.3477 | −0.0930 | 0.067* | |
C9 | 0.8858 (8) | 0.1352 (8) | −0.0341 (6) | 0.055 (2) | |
H13 | 0.8975 | 0.1278 | −0.1023 | 0.066* | |
H14 | 0.7734 | 0.1358 | −0.0247 | 0.066* | |
C10 | 0.9139 (8) | 0.0029 (8) | 0.0049 (6) | 0.079 (4) | |
H15 | 0.8923 | 0.0055 | 0.0718 | 0.094* | |
H16 | 0.8364 | −0.0844 | −0.0293 | 0.094* | |
I1 | 0.55146 (9) | 0.37444 (7) | 0.15451 (5) | 0.05732 (19) | |
I2 | 0.54230 (7) | 0.06704 (6) | 0.16015 (4) | 0.04222 (15) | |
I3 | 0.53942 (8) | −0.22804 (7) | 0.16387 (5) | 0.0602 (2) | |
I4 | 0.96410 (8) | 0.34498 (8) | 0.37380 (5) | 0.0608 (2) | |
I5 | 0.99004 (7) | 0.05335 (7) | 0.33765 (4) | 0.05118 (17) | |
I6 | 1.03499 (9) | −0.23842 (8) | 0.31071 (5) | 0.0636 (2) | |
N1 | 1.0024 (9) | 0.2733 (8) | 0.0121 (5) | 0.0471 (18) | |
N2 | 1.1981 (10) | 0.4712 (9) | 0.0356 (6) | 0.060 (2) | |
H11 | 1.2906 | 0.5258 | 0.0211 | 0.072* | |
N3 | 0.4708 (8) | 0.2639 (8) | 0.5063 (5) | 0.0443 (17) | |
N4 | 0.3853 (10) | 0.3886 (9) | 0.6146 (6) | 0.058 (2) | |
H3 | 0.3111 | 0.4094 | 0.6480 | 0.070* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.039 (5) | 0.053 (6) | 0.048 (5) | 0.005 (4) | 0.007 (4) | 0.002 (5) |
C2 | 0.054 (6) | 0.052 (6) | 0.049 (6) | 0.006 (5) | −0.003 (5) | −0.002 (5) |
C3 | 0.050 (6) | 0.068 (7) | 0.052 (6) | 0.021 (5) | 0.009 (5) | 0.007 (5) |
C4 | 0.062 (6) | 0.074 (7) | 0.038 (5) | 0.027 (6) | 0.005 (5) | −0.001 (5) |
C5 | 0.060 (6) | 0.063 (7) | 0.067 (7) | 0.023 (6) | 0.017 (5) | 0.002 (5) |
C6 | 0.052 (6) | 0.067 (7) | 0.049 (6) | 0.026 (6) | 0.004 (5) | −0.003 (5) |
C7 | 0.039 (5) | 0.049 (6) | 0.072 (7) | 0.005 (5) | −0.010 (5) | −0.012 (5) |
C8 | 0.067 (6) | 0.061 (7) | 0.050 (6) | 0.034 (6) | 0.006 (5) | 0.011 (5) |
C9 | 0.051 (5) | 0.045 (6) | 0.060 (6) | 0.003 (5) | −0.006 (5) | 0.006 (5) |
C10 | 0.056 (6) | 0.037 (6) | 0.121 (10) | −0.018 (5) | −0.001 (7) | 0.009 (6) |
I1 | 0.0714 (4) | 0.0472 (4) | 0.0598 (4) | 0.0265 (3) | 0.0108 (3) | 0.0079 (3) |
I2 | 0.0397 (3) | 0.0447 (3) | 0.0383 (3) | 0.0090 (3) | 0.0015 (2) | −0.0012 (2) |
I3 | 0.0601 (4) | 0.0393 (4) | 0.0767 (5) | 0.0106 (3) | −0.0034 (3) | 0.0040 (3) |
I4 | 0.0584 (4) | 0.0562 (4) | 0.0616 (4) | 0.0098 (3) | 0.0076 (3) | −0.0007 (3) |
I5 | 0.0415 (3) | 0.0630 (4) | 0.0443 (3) | 0.0107 (3) | −0.0010 (3) | 0.0020 (3) |
I6 | 0.0660 (4) | 0.0729 (5) | 0.0604 (4) | 0.0338 (4) | 0.0089 (3) | 0.0062 (4) |
N1 | 0.051 (4) | 0.048 (5) | 0.049 (5) | 0.022 (4) | 0.004 (4) | 0.014 (4) |
N2 | 0.049 (5) | 0.061 (6) | 0.075 (6) | 0.024 (4) | 0.006 (5) | 0.017 (5) |
N3 | 0.040 (4) | 0.048 (5) | 0.043 (4) | 0.009 (4) | 0.003 (3) | 0.008 (3) |
N4 | 0.054 (5) | 0.065 (6) | 0.055 (5) | 0.015 (4) | 0.015 (4) | 0.004 (4) |
C1—C2 | 1.335 (13) | C7—N2 | 1.340 (13) |
C1—N3 | 1.354 (11) | C7—H10 | 0.9300 |
C1—H1 | 0.9300 | C8—N1 | 1.332 (12) |
C2—N4 | 1.348 (12) | C8—N2 | 1.324 (12) |
C2—H2 | 0.9300 | C8—H12 | 0.9300 |
C3—N4 | 1.317 (12) | C9—N1 | 1.477 (10) |
C3—N3 | 1.326 (11) | C9—C10 | 1.5246 |
C3—H4 | 0.9300 | C9—H13 | 0.9700 |
C4—N3 | 1.462 (11) | C9—H14 | 0.9700 |
C4—C5 | 1.519 (13) | C10—C10ii | 1.489 |
C4—H6 | 0.9700 | C10—H15 | 0.9700 |
C4—H5 | 0.9700 | C10—H16 | 0.9700 |
C5—C5i | 1.487 (19) | I1—I2 | 2.9745 (10) |
C5—H8 | 0.9700 | I2—I3 | 2.8662 (10) |
C5—H7 | 0.9700 | I4—I5 | 2.9031 (11) |
C6—C7 | 1.347 (13) | I5—I6 | 2.9604 (11) |
C6—N1 | 1.367 (11) | N2—H11 | 0.8544 |
C6—H9 | 0.9300 | N4—H3 | 0.8628 |
C2—C1—N3 | 107.7 (8) | N1—C8—H12 | 127.1 |
C2—C1—H1 | 126.2 | N2—C8—H12 | 127.1 |
N3—C1—H1 | 126.2 | N1—C9—C10 | 112.9 |
C1—C2—N4 | 107.1 (9) | N1—C9—H13 | 109.0 |
C1—C2—H2 | 126.5 | C10—C9—H13 | 109.0 |
N4—C2—H2 | 126.5 | N1—C9—H14 | 109.0 |
N4—C3—N3 | 108.2 (9) | C10—C9—H14 | 109.0 |
N4—C3—H4 | 125.9 | H13—C9—H14 | 107.8 |
N3—C3—H4 | 125.9 | C10ii—C10—C9 | 112.0 (5) |
N3—C4—C5 | 112.1 (8) | C10ii—C10—H15 | 109.2 |
N3—C4—H6 | 109.2 | C9—C10—H15 | 109.2 |
C5—C4—H6 | 109.2 | C10ii—C10—H16 | 109.2 |
N3—C4—H5 | 109.2 | C9—C10—H16 | 109.2 |
C5—C4—H5 | 109.2 | H15—C10—H16 | 107.9 |
H6—C4—H5 | 107.9 | I3—I2—I1 | 178.89 (3) |
C5i—C5—C4 | 114.5 (10) | I4—I5—I6 | 176.21 (3) |
C5i—C5—H8 | 108.6 | C8—N1—C6 | 108.7 (9) |
C4—C5—H8 | 108.6 | C8—N1—C9 | 125.1 (8) |
C5i—C5—H7 | 108.6 | C6—N1—C9 | 126.2 (8) |
C4—C5—H7 | 108.6 | C8—N2—C7 | 112.3 (9) |
H8—C5—H7 | 107.6 | C8—N2—H11 | 114.7 |
C7—C6—N1 | 108.1 (9) | C7—N2—H11 | 131.3 |
C7—C6—H9 | 125.9 | C3—N3—C1 | 108.0 (8) |
N1—C6—H9 | 125.9 | C3—N3—C4 | 127.3 (8) |
C6—C7—N2 | 105.0 (9) | C1—N3—C4 | 124.6 (7) |
C6—C7—H10 | 127.5 | C3—N4—C2 | 109.0 (8) |
N2—C7—H10 | 127.5 | C3—N4—H3 | 118.4 |
N1—C8—N2 | 105.9 (9) | C2—N4—H3 | 132.6 |
Symmetry codes: (i) −x+1, −y, −z+1; (ii) −x+2, −y, −z. |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H11···I3iii | 0.85 | 3.14 | 3.690 (9) | 124 |
N2—H11···I1iv | 0.85 | 2.99 | 3.666 (9) | 138 |
N4—H3···I1v | 0.86 | 3.25 | 3.714 (9) | 116 |
N4—H3···I6i | 0.86 | 3.03 | 3.679 (8) | 134 |
C6—H9···I4 | 0.93 | 3.13 | 3.823 (10) | 132 |
Symmetry codes: (i) −x+1, −y, −z+1; (iii) x+1, y+1, z; (iv) −x+2, −y+1, −z; (v) −x+1, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C10H16N42+·2I3− |
Mr | 953.67 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 291 |
a, b, c (Å) | 8.4753 (17), 9.7177 (19), 14.110 (3) |
α, β, γ (°) | 95.77 (3), 92.82 (3), 107.17 (3) |
V (Å3) | 1100.9 (4) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 8.46 |
Crystal size (mm) | 0.21 × 0.20 × 0.18 |
Data collection | |
Diffractometer | Rigaku R-AXIS RAPID diffractometer |
Absorption correction | Multi-scan (ABSCOR; Higashi, 1995) |
Tmin, Tmax | 0.266, 0.307 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8492, 3831, 3045 |
Rint | 0.031 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.035, 0.087, 1.10 |
No. of reflections | 3831 |
No. of parameters | 178 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 1.19, −0.86 |
Computer programs: RAPID-AUTO (Rigaku, 1998), CrystalStructure (Rigaku/MSC, 2002), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H11···I3i | 0.85 | 3.14 | 3.690 (9) | 124.3 |
N2—H11···I1ii | 0.85 | 2.99 | 3.666 (9) | 138.0 |
N4—H3···I1iii | 0.86 | 3.25 | 3.714 (9) | 116.0 |
N4—H3···I6iv | 0.86 | 3.03 | 3.679 (8) | 133.6 |
Symmetry codes: (i) x+1, y+1, z; (ii) −x+2, −y+1, −z; (iii) −x+1, −y+1, −z+1; (iv) −x+1, −y, −z+1. |
Acknowledgements
The authors thank Heilongjiang University for supporting this study.
References
Higashi, T. (1995). ABSCOR. Rigaku Corporation, Tokyo, Japan. Google Scholar
Ma, J.-F., Yang, J., Zheng, G.-L. & Liu, J.-F. (2003). Inorg. Chem. 42, 7531–7534. Web of Science CSD CrossRef PubMed CAS Google Scholar
Rigaku (1998). RAPID-AUTO. Rigaku Corporation, Tokyo, Japan. Google Scholar
Rigaku/MSC (2002). CrystalStructure. Rigaku/MSC Inc., The Woodlands, Texas, USA. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Yu, Y.-H., Shi, A.-E., Su, Y., Hou, G.-F. & Gao, J.-S. (2008). Acta Cryst. E64, m628. Web of Science CSD CrossRef IUCr Journals Google Scholar
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The 1,1'-(1,4-butanediyl)diimidazole can be used as a flexible ligand to construct coordination polymer materials (Ma et al., 2003; Yu et al., 2008). In our attempt to synthesize the copper(I) iodide complex with the 1,1'-(1,4-butanediyl)diimidazole, we unexpectedly obtained the title compound (I). Herein, we report its crystal structure.
The asymmetric unit of (I) consists of two halfs of two independent centrosymmetric molecules of 1,1'-(1,4-Butanediyl)diimidazole-3,3'-diium cation and two triiodide anions (Figure 1). The remarkable π-π stacking interactions are observed, with the distance between the π-π stacking planes are 3.575 Å (cations); 3.528 Å (Figure 2),
In the crystal, intermolecular N—H···I, C—H···I hydrogen bonds and π-π stacking interactions link all cations and anions into three-dimensional supramolecular network (Table 1).